
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0371b.4
(449 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203651 UP|TBA1_PEA (P46259) Tubulin alpha-1 chain, complete 842 0.0
TC203804 homologue to UP|Q6VAF9 (Q6VAF9) Alpha-tubulin 4, complete 839 0.0
TC203740 homologue to UP|TBA2_MAIZE (P14641) Tubulin alpha-2 cha... 831 0.0
TC214501 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alp... 738 0.0
TC203306 homologue to UP|TBA3_HORVU (Q9ZRR5) Tubulin alpha-3 cha... 702 0.0
TC214605 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alp... 670 0.0
TC203680 homologue to UP|Q84UZ5 (Q84UZ5) Alpha-tubulin, partial ... 564 e-161
TC214572 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alp... 496 e-141
TC203369 homologue to UP|Q9M406 (Q9M406) Alpha-tubulin 4 (Fragme... 476 e-135
TC204175 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chai... 396 e-111
TC204177 homologue to UP|TBB1_ARATH (P12411) Tubulin beta-1 chai... 396 e-110
TC204180 homologue to UP|TBB_CICAR (Q39445) Tubulin beta chain, ... 395 e-110
TC204178 homologue to UP|TBB7_MAIZE (Q41784) Tubulin beta-7 chai... 395 e-110
TC204187 homologue to UP|TBB6_ARATH (P29514) Tubulin beta-6 chai... 390 e-109
TC204179 UP|TBB1_LUPAL (P37392) Tubulin beta-1 chain, complete 390 e-109
TC214492 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alp... 351 e-108
TC204185 homologue to UP|TBB1_SOYBN (P12459) Tubulin beta-1 chai... 385 e-107
TC203294 homologue to UP|Q84UZ5 (Q84UZ5) Alpha-tubulin, partial ... 337 5e-93
TC203279 homologue to UP|TBA1_ANEPH (P33623) Tubulin alpha-1 cha... 329 1e-90
TC203638 homologue to UP|TBA2_ARATH (P29510) Tubulin alpha-2/alp... 303 8e-83
>TC203651 UP|TBA1_PEA (P46259) Tubulin alpha-1 chain, complete
Length = 1725
Score = 842 bits (2176), Expect = 0.0
Identities = 405/448 (90%), Positives = 431/448 (95%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD +VG +DAFNTFFSETG+GK
Sbjct: 102 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 281
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIV+LCLD
Sbjct: 282 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 461
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 462 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 641
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 642 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 821
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQ+S+ EIT++ FEPS+
Sbjct: 822 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1001
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 1002MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1181
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
TVVP GDLAKVQRAVCMISN+T+VAEVFSRID+KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 1182TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1361
Query: 421 AREDLAALEKDYEEVGAEGEEGEEDEEG 448
AREDLAALEKDYEEVGAE +G++D EG
Sbjct: 1362AREDLAALEKDYEEVGAESGDGDDDGEG 1445
>TC203804 homologue to UP|Q6VAF9 (Q6VAF9) Alpha-tubulin 4, complete
Length = 1692
Score = 839 bits (2168), Expect = 0.0
Identities = 403/449 (89%), Positives = 430/449 (95%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGI PDG MPSD +VG +DAFNTFFSETG+GK
Sbjct: 133 MRECISIHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGK 312
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIV+LCLD
Sbjct: 313 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 492
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 493 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 672
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 673 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 852
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQ+S+ EIT++ FEPS+
Sbjct: 853 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1032
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 1033MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1212
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
TVVP GDLAKVQRAVCMISN+T+VAEVF RID+KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 1213TVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1392
Query: 421 AREDLAALEKDYEEVGAEGEEGEEDEEGY 449
AREDLAALEKDYEEVGAE EG++++E Y
Sbjct: 1393AREDLAALEKDYEEVGAESGEGQDEDEDY 1479
>TC203740 homologue to UP|TBA2_MAIZE (P14641) Tubulin alpha-2 chain (Alpha-2
tubulin), complete
Length = 1600
Score = 831 bits (2146), Expect = 0.0
Identities = 400/448 (89%), Positives = 427/448 (95%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEH IQ DG MPSD ++G +DAFNTFFSETG+GK
Sbjct: 61 MRECISIHIGQAGIQVGNACWELYCLEHAIQADGQMPSDKTIGGGDDAFNTFFSETGAGK 240
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDE+RTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EI +LCLD
Sbjct: 241 HVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIGDLCLD 420
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQG LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 421 RIRKLADNCTGLQGSLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 600
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 601 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 780
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQ+S+ EIT++ FEPS+
Sbjct: 781 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 960
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 961 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAIIKTKRTIQFVDWCPTGFKCGINYQPP 1140
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
TVVP GDLAKVQRAVCMISN+T+VAEVFSRID+KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 1141TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1320
Query: 421 AREDLAALEKDYEEVGAEGEEGEEDEEG 448
AREDLAALEKDYEEVGAE EG+E E+G
Sbjct: 1321AREDLAALEKDYEEVGAEATEGDEGEDG 1404
>TC214501 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alpha-5 chain,
partial (92%)
Length = 1514
Score = 738 bits (1904), Expect = 0.0
Identities = 360/415 (86%), Positives = 387/415 (92%)
Frame = +2
Query: 35 MMPSDTSVGISNDAFNTFFSETGSGKHVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLIS 94
MMP+D++ G++++AFNT SET SG+ V A+ LEP+V+ V G YRQLFHPEQLIS
Sbjct: 2 MMPADSTFGVAHNAFNTCLSETXSGRDVRGAVVXXLEPAVVXXVPCGSYRQLFHPEQLIS 181
Query: 95 GKEDAANNFARGHYTVGREIVELCLDRTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL 154
GKE+ AN+F R HY+ G+EIV LCLDR RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL
Sbjct: 182 GKENGANDFXRXHYSGGKEIVNLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL 361
Query: 155 ERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICR 214
ERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICR
Sbjct: 362 ERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICR 541
Query: 215 RSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAP 274
RSLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYAP
Sbjct: 542 RSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAP 721
Query: 275 VISAAKAYHEQISIPEITSAVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAN 334
VISAAKAYHEQ+S+PEIT+AVFEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA
Sbjct: 722 VISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT 901
Query: 335 IKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYK 394
IKTKRTVQFVDWCPTGFKCGINYQPP+VVP GDLAKVQRAVCMISNNTAVAEVFSRID+K
Sbjct: 902 IKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHK 1081
Query: 395 FDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGEEGEEDEEGY 449
FDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEG E +E+ E Y
Sbjct: 1082FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGAEDDEEGEDY 1246
>TC203306 homologue to UP|TBA3_HORVU (Q9ZRR5) Tubulin alpha-3 chain, partial
(93%)
Length = 1671
Score = 702 bits (1811), Expect = 0.0
Identities = 351/436 (80%), Positives = 375/436 (85%), Gaps = 2/436 (0%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD +VG +DAFNTFFSETG+GK
Sbjct: 129 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 308
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIVELCLD
Sbjct: 309 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVELCLD 488
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 489 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 668
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 669 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 848
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGA+NVDV EFQTNLVPYPRIHFMLSSYAPVISA KA+HEQ+S+ EIT++ FEPS+
Sbjct: 849 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAHHEQLSVGEITNSAFEPSS 1028
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV IKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 1029MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGIIKTKRTIQFVDWCPTGFKCGINYQPP 1208
Query: 361 TVVPAGDLAKVQRAVC--MISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEF 418
TVVP GDLAKV + + + R +M F+ V
Sbjct: 1209TVVPGGDLAKVPEGCVHDLQFHQCC*GLLSHRPQI*PHVMPRXLLFIGMLVRVMERRKIL 1388
Query: 419 SEAREDLAALEKDYEE 434
EDLAAL KDYEE
Sbjct: 1389LXLLEDLAALXKDYEE 1436
>TC214605 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alpha-5 chain,
partial (77%)
Length = 1456
Score = 670 bits (1729), Expect = 0.0
Identities = 324/346 (93%), Positives = 340/346 (97%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE+ISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSD+S G+++DAFNTFFSETGSGK
Sbjct: 128 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSSFGVAHDAFNTFFSETGSGK 307
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVR G YRQLFHPEQLISGKEDAANNFARGHYTVG+EIV+LCLD
Sbjct: 308 HVPRAVFVDLEPTVIDEVRCGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 487
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
Sbjct: 488 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 667
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 668 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 847
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQ+S+PEIT+AVFEP++
Sbjct: 848 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 1027
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDW 346
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRTVQFVDW
Sbjct: 1028MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDW 1165
>TC203680 homologue to UP|Q84UZ5 (Q84UZ5) Alpha-tubulin, partial (68%)
Length = 1059
Score = 564 bits (1453), Expect = e-161
Identities = 274/306 (89%), Positives = 292/306 (94%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGI PDG MPSD +VG +DAFNTFFSETG+GK
Sbjct: 139 MRECISIHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGK 318
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIV+LCLD
Sbjct: 319 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 498
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 499 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 678
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 679 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 858
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQ+S+ EIT++ FEPS
Sbjct: 859 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSV 1038
Query: 301 MMAKCD 306
MMA+CD
Sbjct: 1039MMAQCD 1056
>TC214572 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alpha-5 chain,
partial (57%)
Length = 961
Score = 496 bits (1278), Expect = e-141
Identities = 241/253 (95%), Positives = 250/253 (98%)
Frame = +1
Query: 194 LLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVT 253
L EHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVD+T
Sbjct: 7 LHEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDIT 186
Query: 254 EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSNMMAKCDPRHGKYM 313
EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQ+S+PEITSAVFEPS+MMAKCDPRHGKYM
Sbjct: 187 EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITSAVFEPSSMMAKCDPRHGKYM 366
Query: 314 ACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQR 373
ACCLMYRGDVVPKDVNAAV+NIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQR
Sbjct: 367 ACCLMYRGDVVPKDVNAAVSNIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQR 546
Query: 374 AVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
AVCMISNNTAVAEVF+RIDYKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE
Sbjct: 547 AVCMISNNTAVAEVFARIDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 726
Query: 434 EVGAEGEEGEEDE 446
EVGAEGEE E +E
Sbjct: 727 EVGAEGEEEE*EE 765
>TC203369 homologue to UP|Q9M406 (Q9M406) Alpha-tubulin 4 (Fragment), partial
(90%)
Length = 1045
Score = 476 bits (1225), Expect = e-135
Identities = 230/259 (88%), Positives = 246/259 (94%), Gaps = 1/259 (0%)
Frame = +2
Query: 190 STHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAIN 249
STHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT SLRFDGA+N
Sbjct: 2 STHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALN 181
Query: 250 VDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSNMMAKCDPRH 309
VDV EFQTNLVPYPRIHFMLSSYAPVISA KA+HEQ+S+ EIT++ FEPS+MMAKCDPRH
Sbjct: 182 VDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAHHEQLSVGEITNSAFEPSSMMAKCDPRH 361
Query: 310 GKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLA 369
GKYMACCLMYRGDVVPKDVNAAV IKTKRT+QFVDWCPTGFKCGINYQPPTVVP GDLA
Sbjct: 362 GKYMACCLMYRGDVVPKDVNAAVGIIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA 541
Query: 370 KVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
KVQRAVCMISN+T+V EVFSRID+KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 542 KVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 721
Query: 430 KDYEEVGAEG-EEGEEDEE 447
KDYEEVGAE E+G+E E+
Sbjct: 722 KDYEEVGAEATEDGDEGED 778
>TC204175 homologue to UP|TBB2_SOYBN (P12460) Tubulin beta-2 chain, complete
Length = 1653
Score = 396 bits (1018), Expect = e-111
Identities = 186/450 (41%), Positives = 288/450 (63%), Gaps = 3/450 (0%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ I GQ G Q+G WE+ C EHGI P G D+ + + + N +++E G+
Sbjct: 73 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSELQL--ERINVYYNEASCGR 246
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 247 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 426
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 427 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 606
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 607 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 786
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +S+PE+T +++ N
Sbjct: 787 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKN 966
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 967 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDIPP 1146
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
T ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1147T--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1302
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEEDEE 447
A DL + + Y++ A+ +E EE+EE
Sbjct: 1303AESNMNDLVSEYQQYQDATADEDEYEEEEE 1392
>TC204177 homologue to UP|TBB1_ARATH (P12411) Tubulin beta-1 chain, partial
(98%)
Length = 1663
Score = 396 bits (1017), Expect = e-110
Identities = 180/449 (40%), Positives = 287/449 (63%), Gaps = 3/449 (0%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ + GQ G Q+G+ WE+ C EHGI P G D + + + N +++E G+
Sbjct: 52 MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYTGDEASDLQLERINVYYNEASGGR 231
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP +D +R+G Y ++F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 232 YVPRAVLMDLEPGTMDSIRSGPYGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 411
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 412 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 591
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 592 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 771
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 772 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 951
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 952 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 1131
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ + I N+T++ E+F R+ +F MY ++AF+HWY GEGM+E EF+E
Sbjct: 1132--------RNLKMSCTFIGNSTSIQEMFRRVSEQFTAMYRRKAFLHWYTGEGMDEMEFTE 1287
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEEDE 446
A DL A + Y++ A+ +E +E+E
Sbjct: 1288AESNMNDLVAEYQQYQDATADEDEYDEEE 1374
>TC204180 homologue to UP|TBB_CICAR (Q39445) Tubulin beta chain, partial
(97%)
Length = 1729
Score = 395 bits (1016), Expect = e-110
Identities = 181/448 (40%), Positives = 286/448 (63%), Gaps = 3/448 (0%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ + GQ G Q+G+ WE+ C EHGI P G + + I + N +++E G+
Sbjct: 62 MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYNEEGNSSIQLERINVYYNEASGGR 241
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP +D +R+G Y ++F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 242 YVPRAVLMDLEPGTMDSIRSGPYGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 421
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 422 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 601
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 602 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 781
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 782 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 961
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 962 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 1141
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ + I N+T++ E+F R+ +F MY ++AF+HWY GEGM+E EF+E
Sbjct: 1142--------RNLKMSSTFIGNSTSIQEMFRRVSEQFTAMYRRKAFLHWYTGEGMDEMEFTE 1297
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEED 445
A DL A + Y++ AE +E E+D
Sbjct: 1298AESNMNDLVAEYQQYQDATAEEDEYEDD 1381
>TC204178 homologue to UP|TBB7_MAIZE (Q41784) Tubulin beta-7 chain (Beta-7
tubulin), complete
Length = 1720
Score = 395 bits (1016), Expect = e-110
Identities = 186/450 (41%), Positives = 287/450 (63%), Gaps = 3/450 (0%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ I GQ G Q+G WE+ C EHGI G D+ + + + N +++E G+
Sbjct: 147 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQL--ERINVYYNEASGGR 320
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 321 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 500
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 501 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 680
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 681 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 860
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 861 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 1040
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 1041MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 1220
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1221--------KGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1376
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEEDEE 447
A DL A + Y++ A+ EE EE+EE
Sbjct: 1377AESNMNDLVAEYQQYQDATADEEEYEEEEE 1466
>TC204187 homologue to UP|TBB6_ARATH (P29514) Tubulin beta-6 chain, partial
(98%)
Length = 1882
Score = 390 bits (1002), Expect = e-109
Identities = 183/450 (40%), Positives = 286/450 (62%), Gaps = 3/450 (0%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ + GQ G Q+G+ WE+ C EHGI P G ++ + + + N +++E G+
Sbjct: 53 MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGKYVGNSDLQL--ERVNVYYNEASCGR 226
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 227 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 406
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 407 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 586
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 587 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 766
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 767 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 946
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K +
Sbjct: 947 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----C 1114
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ P G + A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1115DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1282
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEEDEE 447
A DL + + Y++ AE + EDEE
Sbjct: 1283AESNMNDLVSEYQQYQDATAEDDGEYEDEE 1372
>TC204179 UP|TBB1_LUPAL (P37392) Tubulin beta-1 chain, complete
Length = 1929
Score = 390 bits (1002), Expect = e-109
Identities = 181/449 (40%), Positives = 284/449 (62%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ I GQ G Q+G WE+ C EHGI G D + + + N +++E G+
Sbjct: 111 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDNELQL--ERVNVYYNEASCGR 284
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 285 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 464
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 465 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 644
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 645 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 824
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 825 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 1004
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 1005MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP 1184
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
T ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1185T--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1340
Query: 421 AREDLAALEKDYEEVGAEGEEGEEDEEGY 449
A ++ L +Y++ ++ D+EGY
Sbjct: 1341AESNMNDLVSEYQQY----QDATADDEGY 1415
>TC214492 homologue to UP|TBA3_ARATH (P20363) Tubulin alpha-3/alpha-5 chain,
partial (47%)
Length = 691
Score = 351 bits (901), Expect(2) = e-108
Identities = 168/182 (92%), Positives = 178/182 (97%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE+ISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSD++ G+++DAFNTFFSETGSGK
Sbjct: 61 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSTFGVAHDAFNTFFSETGSGK 240
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVR G YRQLFHPEQLISGKEDAANNFARGHYTVG+EIV+LCLD
Sbjct: 241 HVPRAVFVDLEPTVIDEVRCGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 420
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
Sbjct: 421 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 600
Query: 181 VV 182
VV
Sbjct: 601 VV 606
Score = 58.2 bits (139), Expect(2) = e-108
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 182 VEPYNSVLSTHSLLEHTDVVVLLDNEAIY 210
+EPYNSVLSTHSLLEHTDV VLLDNEAIY
Sbjct: 605 LEPYNSVLSTHSLLEHTDVAVLLDNEAIY 691
>TC204185 homologue to UP|TBB1_SOYBN (P12459) Tubulin beta-1 chain, complete
Length = 1732
Score = 385 bits (988), Expect = e-107
Identities = 176/450 (39%), Positives = 286/450 (63%), Gaps = 3/450 (0%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ + GQ G Q+G WE+ C EHGI G ++ + + + N +++E G+
Sbjct: 149 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGNYVGNSHLQL--ERVNVYYNEASGGR 322
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 323 YVPRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLD 502
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF + +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 503 VVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 682
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 683 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTC 862
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + ++IPE+T +++ N
Sbjct: 863 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARN 1042
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 1043MMCAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 1222
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
T + + + N+T++ E+F R+ +F +M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1223T--------GLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTE 1378
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEEDEE 447
A DL A + Y++ A + +EDE+
Sbjct: 1379AESNMNDLVAEYQQYQDATAVDDHEDEDED 1468
>TC203294 homologue to UP|Q84UZ5 (Q84UZ5) Alpha-tubulin, partial (40%)
Length = 703
Score = 337 bits (865), Expect = 5e-93
Identities = 165/190 (86%), Positives = 174/190 (90%), Gaps = 4/190 (2%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD +VG +DAFNTFFSETG+GK
Sbjct: 128 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 307
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIVELCLD
Sbjct: 308 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVELCLD 487
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT YPSPQ S
Sbjct: 488 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTGYPSPQGSNL 667
Query: 181 VVE----PYN 186
VV P+N
Sbjct: 668 VVSLQQGPFN 697
>TC203279 homologue to UP|TBA1_ANEPH (P33623) Tubulin alpha-1 chain, partial
(39%)
Length = 773
Score = 329 bits (844), Expect = 1e-90
Identities = 153/176 (86%), Positives = 167/176 (93%)
Frame = +3
Query: 274 PVISAAKAYHEQISIPEITSAVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 333
PVISA KAYHEQ+S+ EIT++ FEPS+MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA
Sbjct: 102 PVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 281
Query: 334 NIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDY 393
IKTKRT+QFVDWCPTGFKCGINYQPPTVVP GDLAKVQRAVCMISN+T+VAEVF RID+
Sbjct: 282 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDH 461
Query: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGEEGEEDEEGY 449
KFDLMY+KRAFVHWY+GEGMEEGEFSEAREDLAALEKDYEEVGAE EG+E++E Y
Sbjct: 462 KFDLMYAKRAFVHWYLGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGQEEDEDY 629
>TC203638 homologue to UP|TBA2_ARATH (P29510) Tubulin alpha-2/alpha-4 chain,
partial (37%)
Length = 737
Score = 303 bits (777), Expect = 8e-83
Identities = 142/164 (86%), Positives = 153/164 (92%)
Frame = +3
Query: 283 HEQISIPEITSAVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQ 342
HEQ+S+ EIT++ FEP +MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV IKTKRT+Q
Sbjct: 3 HEQLSVGEITNSAFEPLSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGIIKTKRTIQ 182
Query: 343 FVDWCPTGFKCGINYQPPTVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKR 402
FVDWCPTGFKCGINYQPPTVVP GDLAKVQRAVCMISN+T+V EVFSRID+KFDLMY+KR
Sbjct: 183 FVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKR 362
Query: 403 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGEEGEEDE 446
AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE E + DE
Sbjct: 363 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEATEEDGDE 494
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,576,857
Number of Sequences: 63676
Number of extensions: 247646
Number of successful extensions: 1414
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of query: 449
length of database: 12,639,632
effective HSP length: 100
effective length of query: 349
effective length of database: 6,272,032
effective search space: 2188939168
effective search space used: 2188939168
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0371b.4