BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0370.9
(642 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC220238 UP|Q84VH5 (Q84VH5) Envelope-like protein (Fragment), co... 375 e-104
TC211136 UP|Q84VI3 (Q84VI3) Envelope-like protein (Fragment), co... 363 e-100
TC220237 UP|O64406 (O64406) Envelope-like (Fragment), complete 355 5e-98
TC218782 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone n... 47 3e-05
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 44 2e-04
TC218918 UP|Q39892 (Q39892) Nucleosome assembly protein 1, complete 39 0.007
BE822052 similar to GP|4557063|gb|A expressed protein {Arabidops... 39 0.009
TC224564 similar to PIR|T51159|T51159 HMG protein [imported] - A... 39 0.009
TC218919 homologue to UP|Q39892 (Q39892) Nucleosome assembly pro... 39 0.009
TC219508 homologue to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deace... 38 0.016
TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C2... 37 0.021
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 37 0.027
TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Pro... 37 0.027
TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%) 36 0.046
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 36 0.046
TC215452 similar to UP|P93488 (P93488) NAP1Ps, partial (29%) 36 0.046
TC215451 weakly similar to UP|Q94K07 (Q94K07) Nucleosome assembl... 36 0.046
AI495341 36 0.060
TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 36 0.060
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 36 0.060
>TC220238 UP|Q84VH5 (Q84VH5) Envelope-like protein (Fragment), complete
Length = 2128
Score = 375 bits (962), Expect = e-104
Identities = 239/655 (36%), Positives = 357/655 (54%), Gaps = 15/655 (2%)
Frame = +1
Query: 1 MSQESGKQSAPGLVPVKNAHGVRFLGLKSPSSHSTRVTRSSSGIAAQSSSPGHSPTPKKM 60
M+ + SAPG V ++ K+PS+ R I PG +P P+K+
Sbjct: 205 MATSPKETSAPGSPSVPSSPS----STKAPSNQE----RPEFNIQPIQMIPGQAPVPEKL 360
Query: 61 RTKQVVTKKKTLRFSPPQDTSPISESDTE----------NV---ADIPDLDIVHAEDLLD 107
K+ K + +P TSP E DTE N+ +PD D +D+
Sbjct: 361 VPKRQQGVK--ISENPSLATSP-REVDTEMDKKIRTIVSNILKDVSVPDAD----KDVPT 519
Query: 108 LASARVSEPPVQSNVEKSTSFSEDSVDVHDDAPPMKKSVIKTGSAKAPPETSSRKGKEHV 167
++ VS P + +V S++ + + + ++ T AP G
Sbjct: 520 SSTPNVSVPDAEKDVPTSSTPNAEVLSSPSKEDSTEEEDQATEETPAPRAPEPAPGDLID 699
Query: 168 ILDSDGDTSDDVDVTVKNIESRLRKKMKHATPVKST--IRTPKDSKAAGSVRKSKGETTS 225
+ + + D + I RL+ + K TP+K + I+T K+ TTS
Sbjct: 700 LEEVESDEEPIANKLAPGIAERLQSR-KGKTPIKRSGRIKTMAQKKSTPIT-----PTTS 861
Query: 226 KGKGLNVSNKKRKHVSDHESDQDGEPTMPDISTTTRKRVKGKRVPMNVADVPLDNVSFHY 285
+ + + +KKRK +S +SD D E +PDI R + GK+VP NV D PLDN+SFH
Sbjct: 862 RRSKVAIPSKKRKEISSSDSDDDVELDVPDIK---RAKTSGKKVPGNVPDAPLDNISFHS 1032
Query: 286 ADNAQRWKFVSHRRIAIERELSEEALEFKEIIDLLSKAELMKTVKGIGRCYEKLVREFIV 345
DN +RWKFV RR+A+EREL +AL+ KEI+DL+ A L+KTV +G CYE LVREFIV
Sbjct: 1033IDNVERWKFVYQRRLALERELGRDALDCKEIMDLIKAAGLLKTVTKLGDCYESLVREFIV 1212
Query: 346 NISSDYDDAGSAEFHKVFFREKCVHLSPVVINEFLGRSTTAVAEGESDLNEIAKVISGKQ 405
NI SD + S E+ KVF R KCV SP VIN++LGR T V + ++IAK I+ KQ
Sbjct: 1213NIPSDITNRKSDEYQKVFVRGKCVRFSPAVINKYLGRPTDGVVDITVSEHQIAKEITAKQ 1392
Query: 406 VMQWPKKGLLPSGKLTAKFTVLSKIGAANWLATNHTSGITIPLAKLIFWIGTGAMMDFGQ 465
V WPKKG L +GKL+ K+ +L +IGAANW+ TNHTS + L K ++ +GT + +FG
Sbjct: 1393VQHWPKKGKLSAGKLSVKYAILHRIGAANWVPTNHTSTVATGLGKFLYAVGTKSKFNFGN 1572
Query: 466 HVFEHTFKHVGSYAVKLSIMFPCLITELILQQHPSILQADEAPSKKGLPLNFDYRLFAGT 525
++F+ T KH S+AVKL I FP ++ ++L QHP++L ++ K+ PL+ Y+LF GT
Sbjct: 1573YIFDQTVKHSESFAVKLPIAFPTVLCGIMLSQHPNMLNYTDSVMKRESPLSLHYKLFEGT 1752
Query: 526 HVPNIVLNAPKDAPSASGTKGVTSTGKDDILAELKEISKTLQATIQASKVRKHNVDQLIK 585
HVP+IV + K A S + KD ++AELK+ K L+ATI+A+ +K +++LIK
Sbjct: 1753HVPDIVSTSGKAAASG-------AVSKDALIAELKDTCKVLEATIKATTEKKMELERLIK 1911
Query: 586 MLAAPADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSEST 640
L+ D+ ++E+A E+++EA ++++ E+ E D D SE+T
Sbjct: 1912RLSESGIDDGEAAEEEEEA-----AEEEEEAAEEEEDAAEDTE--PDDDDDSEAT 2055
>TC211136 UP|Q84VI3 (Q84VI3) Envelope-like protein (Fragment), complete
Length = 2043
Score = 363 bits (931), Expect = e-100
Identities = 218/601 (36%), Positives = 343/601 (56%), Gaps = 15/601 (2%)
Frame = +1
Query: 51 PGHSPTPKKMRTKQVVTKKKTLRFSPPQDTSPISESDTE-------------NVADIPDL 97
PG + P+K+ ++ K + +P TSP E DTE A +P+
Sbjct: 307 PGQASVPEKLVPRRPQGVK--IAENPSPATSP-REVDTEMDKKIRSIVSSILKDASVPEA 477
Query: 98 DIVHAEDLLDLASARVSEPPVQSNVEKSTSFSEDSVDVHDDAPPMKKSVIKTGSAKAPPE 157
D ED+ ++ VS P V+ +V S++ + +++ + ++ AP
Sbjct: 478 D----EDVPTSSNPNVSVPDVKKDVPTSSAPNAEALPSPSEEGSTEEDDQAAEETPAPRA 645
Query: 158 TSSRKGKEHVILDSDGDTSDDVDVTVKNIESRLRKKMKHATPVKST--IRTPKDSKAAGS 215
G + + + D + I RL+ + K TP+K + I+T K+
Sbjct: 646 PEPAPGDLIDLEEVESDEEPIANRLAPGIAERLQSR-KGKTPIKRSGRIKTMAQKKSTPI 822
Query: 216 VRKSKGETTSKGKGLNVSNKKRKHVSDHESDQDGEPTMPDISTTTRKRVKGKRVPMNVAD 275
TS+ + + +KKRK +S +SD+D E D+ST+ + + GK+VP NV D
Sbjct: 823 T-----PATSRRSKVAIPSKKRKEISSSDSDKDVEL---DVSTSKKAKTSGKKVPGNVPD 978
Query: 276 VPLDNVSFHYADNAQRWKFVSHRRIAIERELSEEALEFKEIIDLLSKAELMKTVKGIGRC 335
PLDN+SFH N ++WK+V RR+A+EREL +AL+ KEI+DL+ A L+KTV +G C
Sbjct: 979 APLDNISFHSIGNVEKWKYVYQRRLAVERELGRDALDCKEIMDLIKAAGLLKTVSKLGDC 1158
Query: 336 YEKLVREFIVNISSDYDDAGSAEFHKVFFREKCVHLSPVVINEFLGRSTTAVAEGESDLN 395
YE LVREFIVNI SD + S E+ KVF R KCV SP VIN++LGR T V + + +
Sbjct: 1159YEGLVREFIVNIPSDISNRKSDEYQKVFVRGKCVKFSPAVINKYLGRPTDGVIDIDVSEH 1338
Query: 396 EIAKVISGKQVMQWPKKGLLPSGKLTAKFTVLSKIGAANWLATNHTSGITIPLAKLIFWI 455
+IAK I+ K+V WPKKG L +GKL+ K+ +L +IGAANW+ TNHTS + L K ++ +
Sbjct: 1339QIAKEITAKRVQHWPKKGKLSAGKLSVKYAILHRIGAANWVPTNHTSTVATGLGKFLYAV 1518
Query: 456 GTGAMMDFGQHVFEHTFKHVGSYAVKLSIMFPCLITELILQQHPSILQADEAPSKKGLPL 515
GT + +FG ++F+ T KH S+A+KL I FP ++ ++L QHP++L ++ K+ PL
Sbjct: 1519GTKSKFNFGNYIFDQTVKHSESFAIKLPIAFPTVLCGIMLSQHPNMLNYTDSVMKRESPL 1698
Query: 516 NFDYRLFAGTHVPNIVLNAPKDAPSASGTKGVTSTGKDDILAELKEISKTLQATIQASKV 575
+ Y+LF GTHVP+IV + + A+ + V+ KD ++AELK+ K L+ATI+A+
Sbjct: 1699SLHYKLFEGTHVPDIVSTSVSTSGKAAASGAVS---KDALIAELKDTCKVLEATIKATTE 1869
Query: 576 RKHNVDQLIKMLAAPADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADS 635
+K ++ LIK L+ D+ + A +E+ EA E+++EA ++++ EE E D+++
Sbjct: 1870KKMELELLIKRLSESGIDD--EEAAEEEGEA---AEEEEEAAEEEEDAAEETESDDDSEA 2034
Query: 636 T 636
T
Sbjct: 2035T 2037
>TC220237 UP|O64406 (O64406) Envelope-like (Fragment), complete
Length = 1974
Score = 355 bits (910), Expect = 5e-98
Identities = 223/579 (38%), Positives = 326/579 (55%), Gaps = 7/579 (1%)
Frame = +1
Query: 51 PGHSPTPKKMRTKQVVTKKKTLRFSPPQDTSPISESDTENVADIPDLDIVHAEDLLDLAS 110
PG +P P+K+ K+ K + +P TSP E DTE I + +L AS
Sbjct: 319 PGQAPVPEKLVPKRQQGVK--ISENPSIATSP-REVDTEMDKKIRSI----VSSILKNAS 477
Query: 111 ARVSEPPVQS----NVEK-STSFSEDSVDVHDDAPPMKKSVIKTGSAKAPPETSSRKGKE 165
++ V + N E S+S E+S + + A T AP G
Sbjct: 478 VPDADKDVPTSSTPNAEVLSSSSKEESTEEEEQA---------TEETPAPRAPEPAPGDL 630
Query: 166 HVILDSDGDTSDDVDVTVKNIESRLRKKMKHATPVKST--IRTPKDSKAAGSVRKSKGET 223
+ + + D + I RL+ + K TP+ + I+T K+ T
Sbjct: 631 IDLEEVESDEEPIANKLAPGIAERLQSR-KGKTPITRSGRIKTMAQKKSTPIT-----PT 792
Query: 224 TSKGKGLNVSNKKRKHVSDHESDQDGEPTMPDISTTTRKRVKGKRVPMNVADVPLDNVSF 283
TS+ + + +KKRK S +SD D E +PDI R + GK+VP NV D PLDN+SF
Sbjct: 793 TSRWSKVAIPSKKRKEFSSSDSDDDVELDVPDIK---RAKKSGKKVPGNVPDAPLDNISF 963
Query: 284 HYADNAQRWKFVSHRRIAIERELSEEALEFKEIIDLLSKAELMKTVKGIGRCYEKLVREF 343
H N +RWKFV RR+A+EREL +AL+ KEI+DL+ A L+KTV +G CYE LVREF
Sbjct: 964 HSIGNVERWKFVYQRRLALERELGRDALDCKEIMDLIKAAGLLKTVTKLGDCYESLVREF 1143
Query: 344 IVNISSDYDDAGSAEFHKVFFREKCVHLSPVVINEFLGRSTTAVAEGESDLNEIAKVISG 403
IVNI SD + S E+ KVF R KCV SP VIN++LGR T V + ++IAK I+
Sbjct: 1144IVNIPSDITNRKSDEYQKVFVRGKCVRFSPAVINKYLGRPTEGVVDIAVSEHQIAKEITA 1323
Query: 404 KQVMQWPKKGLLPSGKLTAKFTVLSKIGAANWLATNHTSGITIPLAKLIFWIGTGAMMDF 463
KQV WPKKG L +GKL+ K+ +L +IG ANW+ TNHTS + L K ++ +GT + +F
Sbjct: 1324KQVQHWPKKGKLSAGKLSVKYAILHRIGTANWVPTNHTSTVATGLGKFLYAVGTKSKFNF 1503
Query: 464 GQHVFEHTFKHVGSYAVKLSIMFPCLITELILQQHPSILQADEAPSKKGLPLNFDYRLFA 523
G ++F+ T KH S+AVKL I FP ++ ++L QHP+IL ++ K+ L+ Y+LF
Sbjct: 1504GNYIFDQTVKHSESFAVKLPIAFPTVLCGIMLSQHPNILNNIDSVKKRESALSLHYKLFE 1683
Query: 524 GTHVPNIVLNAPKDAPSASGTKGVTSTGKDDILAELKEISKTLQATIQASKVRKHNVDQL 583
GTHVP+IV + K A S + T KD ++AELK+ K L+ATI+A+ +K +++L
Sbjct: 1684GTHVPDIVSTSGKAAASGAVT-------KDALIAELKDTCKVLEATIKATTEKKMELERL 1842
Query: 584 IKMLAAPADDEVSDPADDEDAEADLDEEDDDEALSDDDN 622
IK L+ D+ + A++E+ A+ +++ ++ SDDD+
Sbjct: 1843IKRLSDSGIDD-GEAAEEEEEAAEEEKDAAEDTESDDDD 1956
>TC218782 similar to UP|Q41042 (Q41042) Pisum sativum L. (clone na-481-5),
partial (20%)
Length = 925
Score = 47.0 bits (110), Expect = 3e-05
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 2/159 (1%)
Frame = +1
Query: 28 KSPSSHSTRVTRSSSGIAAQSSSPGHSPTPKKMRTKQVVTKKKT--LRFSPPQDTSPISE 85
K+P+ + T + G AA SSS S +V TKK+T ++ ++ S +
Sbjct: 13 KTPTKNGNLSTPAKKGKAASSSSSSDSSEDDSSDEDEVATKKQTKEVKVQKGKEESSSDD 192
Query: 86 SDTENVADIPDLDIVHAEDLLDLASARVSEPPVQSNVEKSTSFSEDSVDVHDDAPPMKKS 145
S +E+ + P + + +S P + S+S SE S D D+ K
Sbjct: 193 SSSESEDEKPAAKVAVPPKNQSAKNGTLSTPAEKGKPAASSSSSESSDDDSDEDEAPKSK 372
Query: 146 VIKTGSAKAPPETSSRKGKEHVILDSDGDTSDDVDVTVK 184
V P T + E +SD D+S D D K
Sbjct: 373 VAPAAGKNVPASTKITQPSES--SESDSDSSSDEDKNKK 483
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/79 (31%), Positives = 40/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 566 LQATIQASKVRKHNVDQLIKMLAAPADDEVSDPADD--EDAEADLDEEDDDEALSDDDNV 623
L + ++A+K V++ + DDE + D+ +DAE D DEE+DD+ DDN
Sbjct: 209 LDSKMKATKELSEQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDND 388
Query: 624 EEEGEYPTDADSTSESTSE 642
+EE + P D + E
Sbjct: 389 DEEDDAPDGGDDDDDEDDE 445
Score = 38.1 bits (87), Expect = 0.012
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DDE D D+ED D ++DDDE ++ +V+ GE P D D+ S+ S+
Sbjct: 365 DDEGDDNDDEEDDAPDGGDDDDDEDDEEEGDVQRGGE-PDDDDNDSDDDSD 514
Score = 34.3 bits (77), Expect = 0.18
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDE--------EDDDEALSDDDNVEEEGEYPTDADSTSE 638
+D+ D DD+D E D +E DDD+ SDDD+ ++E E D + E
Sbjct: 395 EDDAPDGGDDDDDEDDEEEGDVQRGGEPDDDDNDSDDDSDDDEDEDEEDEEEQGE 559
Score = 33.9 bits (76), Expect = 0.23
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DD+ +D DD D + D DEED++E ++D E P + E++S+
Sbjct: 479 DDDDNDSDDDSDDDEDEDEEDEEEQGEEEDLGTEYLIRPLETAEEEEASSD 631
Score = 32.3 bits (72), Expect = 0.67
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = -3
Query: 2 SQESGKQSAPGLVPVKNAHGVRFLGLKSPSSHST-----RVTRSSSGIAAQSSSPGHSPT 56
SQ S S+ P + G + L S S+ S V +SSS + SSS S +
Sbjct: 690 SQSSSSTSSSSSSPFSS--GSKSLDASSSSAVSKGRIRYSVPKSSSSPCSSSSSSSSSSS 517
Query: 57 PKKMRTKQVVTKKKTLRFSPPQDTSPISESDTENVADIPDLDIVHAEDLLDLASARVSEP 116
+ ++ + + SPP+ TSP S S + + + P + L +S+ S
Sbjct: 516 SSESSSESLSSSSG----SPPRWTSPSSSSSSSSSSSPPSGASSSSSSLSSPSSSSSSSS 349
Query: 117 PVQSNVEKSTSFSEDS 132
S+ ST+ S DS
Sbjct: 348 SSSSSSASSTTSSTDS 301
Score = 31.6 bits (70), Expect = 1.1
Identities = 20/63 (31%), Positives = 29/63 (45%), Gaps = 12/63 (19%)
Frame = +2
Query: 592 DDEVSDPADDEDAEA-----DLDEEDDDE-------ALSDDDNVEEEGEYPTDADSTSES 639
DD+ D DDE+ +A D D+EDD+E DDD+ + + + D D E
Sbjct: 362 DDDEGDDNDDEEDDAPDGGDDDDDEDDEEEGDVQRGGEPDDDDNDSDDDSDDDEDEDEED 541
Query: 640 TSE 642
E
Sbjct: 542 EEE 550
>TC218918 UP|Q39892 (Q39892) Nucleosome assembly protein 1, complete
Length = 1507
Score = 38.9 bits (89), Expect = 0.007
Identities = 18/38 (47%), Positives = 24/38 (62%)
Frame = +1
Query: 589 APADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEE 626
A DE D DDED E D DE++D+E D+D+ EE+
Sbjct: 973 AAQGDEFEDLEDDEDEEEDEDEDEDEEDDEDEDDEEED 1086
Score = 30.4 bits (67), Expect = 2.5
Identities = 15/51 (29%), Positives = 24/51 (46%)
Frame = +1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DDE + +DED + + DE++DDE D +++ D E E
Sbjct: 1006 DDEDEEEDEDEDEDEEDDEDEDDEEEDDTKTKKKKSGKAQAGDGDGERPPE 1158
>BE822052 similar to GP|4557063|gb|A expressed protein {Arabidopsis
thaliana}, partial (28%)
Length = 668
Score = 38.5 bits (88), Expect = 0.009
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYP 630
DD+ SD DD+D + D D ED+DE +D+ EEE P
Sbjct: 374 DDDDSDEDDDDDNDGDDDGEDEDEKEGEDEEDEEEVPQP 258
Score = 35.0 bits (79), Expect = 0.10
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 588 AAPADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSE 638
A P DD ++ A + + D DE+DDD+ DDD +E+ + D + E
Sbjct: 422 ADPEDDPEANGAGGSNDDDDSDEDDDDDNDGDDDGEDEDEKEGEDEEDEEE 270
Score = 31.6 bits (70), Expect = 1.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 593 DEVSDPADDEDAEADLDEEDDDEALSDDD---NVEEEGEYPTDADSTSESTSE 642
+E +DP DD +A DDD++ DDD + +++GE + + E E
Sbjct: 431 EEEADPEDDPEANGAGGSNDDDDSDEDDDDDNDGDDDGEDEDEKEGEDEEDEE 273
Score = 30.0 bits (66), Expect = 3.3
Identities = 16/46 (34%), Positives = 23/46 (49%)
Frame = -1
Query: 594 EVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSES 639
+ SD +DED E D D D ++ D+D EGE D + E+
Sbjct: 530 DASDSDEDEDEEDDHDTNDQNDEEGDED-FSGEGEEEADPEDDPEA 396
Score = 28.9 bits (63), Expect = 7.4
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Frame = -1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEA-------------LSDDDNVEEEGEYPTDADSTSE 638
DD ++ +DE+ + D E ++EA +DDD+ +E+ + D D E
Sbjct: 494 DDHDTNDQNDEEGDEDFSGEGEEEADPEDDPEANGAGGSNDDDDSDEDDDDDNDGDDDGE 315
Query: 639 STSE 642
E
Sbjct: 314 DEDE 303
>TC224564 similar to PIR|T51159|T51159 HMG protein [imported] - Arabidopsis
thaliana {Arabidopsis thaliana;} , partial (82%)
Length = 833
Score = 38.5 bits (88), Expect = 0.009
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = +1
Query: 560 KEISKTLQATIQASKV-RKHNVDQLIKML----AAPADDEVSDPA-----DDEDAEADLD 609
K +S +A +A RK ++LIK A+ ADDE SD + D++DA + +
Sbjct: 361 KSLSSAEKAPYEAKAAKRKAEYEKLIKAYDKKQASSADDEESDKSKSEVNDEDDASGEEE 540
Query: 610 EEDDDEALSDDDN 622
EEDD+E D+D+
Sbjct: 541 EEDDEEEEDDEDD 579
>TC218919 homologue to UP|Q39892 (Q39892) Nucleosome assembly protein 1,
partial (33%)
Length = 729
Score = 38.5 bits (88), Expect = 0.009
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 593 DEVSDPADDEDAEADLDEEDDDEALSDDDNVEEE 626
DE D DDED E D DE++D+E D+D+ EE+
Sbjct: 172 DEFEDLEDDEDEEEDEDEDEDEEYDEDEDDEEED 273
Score = 30.4 bits (67), Expect = 2.5
Identities = 12/28 (42%), Positives = 18/28 (63%)
Frame = +1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSD 619
DDE + +DED + + DE++DDE D
Sbjct: 193 DDEDEEEDEDEDEDEEYDEDEDDEEEDD 276
>TC219508 homologue to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (62%)
Length = 1291
Score = 37.7 bits (86), Expect = 0.016
Identities = 31/100 (31%), Positives = 48/100 (48%)
Frame = +1
Query: 543 GTKGVTSTGKDDILAELKEISKTLQATIQASKVRKHNVDQLIKMLAAPADDEVSDPADDE 602
GT G + E +E++ Q + +KV K + + + + APA + +DP DE
Sbjct: 385 GTSGGNNASDFSDSEEDEELALEGQDNDEGAKVTKPS--KPVPKIGAPA--KTADPKKDE 552
Query: 603 DAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
++D DE DDD L+ +D E D+DS ES E
Sbjct: 553 GDDSD-DESDDD--LAGEDEFGSSDEMDDDSDSDEESDEE 663
>TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23), partial
(7%)
Length = 735
Score = 37.4 bits (85), Expect = 0.021
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 593 DEVSDPADDEDAE---ADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DE DP DD +A +D D++D+D DDD +EE E D + E TS+
Sbjct: 432 DEEGDPEDDPEANGGGSDDDDDDNDNEEDDDDGEDEEEE--EDEEEDEEETSQ 584
Score = 32.0 bits (71), Expect = 0.87
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 590 PADDEVSDP--ADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSE 638
P DD ++ +DD+D + D +E+DDD +++ EEE E T T +
Sbjct: 447 PEDDPEANGGGSDDDDDDNDNEEDDDDGEDEEEEEDEEEDEEETSQPPTKK 599
Score = 29.6 bits (65), Expect = 4.3
Identities = 14/38 (36%), Positives = 20/38 (51%)
Frame = +3
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEY 629
+D D D ED E + DEE+D+E S + + EY
Sbjct: 501 NDNEEDDDDGEDEEEEEDEEEDEEETSQPPTKKRK*EY 614
Score = 29.3 bits (64), Expect = 5.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DD+ DDED D D++ +DE S ++ +EEG+ D ++ + +
Sbjct: 342 DDDKDGDEDDEDGH-DQDDDGEDEEFSGEEG-DEEGDPEDDPEANGGGSDD 488
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 37.0 bits (84), Expect = 0.027
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 593 DEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
+E + +DED + D+EDDD+ DDD+ E+EG D D + +E
Sbjct: 430 EENGEEDEDEDGDDQDDDEDDDD---DDDDEEDEGGEEEDEDGAEDEENE 290
Score = 36.6 bits (83), Expect = 0.035
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDA 633
DD+ D DD+D E + EE+D++ D++N E+E + +A
Sbjct: 385 DDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEEA 260
Score = 33.5 bits (75), Expect = 0.30
Identities = 15/47 (31%), Positives = 26/47 (54%)
Frame = -1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSE 638
D++ D DDED + D D+E+D+ +D++ E+ E D + E
Sbjct: 406 DEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEE 266
Score = 33.1 bits (74), Expect = 0.39
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
+++ + DD+D + D D++DDDE +D+ EEE E + + E +
Sbjct: 418 EEDEDEDGDDQDDDEDDDDDDDDE---EDEGGEEEDEDGAEDEENEEDEED 275
Score = 32.0 bits (71), Expect = 0.87
Identities = 17/52 (32%), Positives = 26/52 (49%), Gaps = 4/52 (7%)
Frame = -1
Query: 592 DDEVSDPADDEDAEADLDEEDDDE----ALSDDDNVEEEGEYPTDADSTSES 639
+DE D D +D E D D++DD+E D+D E+E + D E+
Sbjct: 415 EDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEEA 260
Score = 30.0 bits (66), Expect = 3.3
Identities = 14/39 (35%), Positives = 21/39 (52%)
Frame = -1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYP 630
DD+ D D+ E D D +D+E D+++ EEE P
Sbjct: 367 DDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEEALQP 251
>TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23),
partial (8%)
Length = 581
Score = 37.0 bits (84), Expect = 0.027
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 593 DEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
D DP + E+D D+EDDD+ DDDN E++G+ D + + E
Sbjct: 383 DSDDDPEANGGGESDDDDEDDDD--DDDDNDEDDGDEDDDDEEDEDEDEE 526
Score = 36.6 bits (83), Expect = 0.035
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPT 631
DDE D DD++ E D DE+DDDE D+D EE + P+
Sbjct: 431 DDEDDDDDDDDNDEDDGDEDDDDE--EDEDEDEETPQPPS 544
Score = 32.7 bits (73), Expect = 0.51
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 591 ADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYP 630
+DD+ D DD+D D DE+D DE D+++ +E+ E P
Sbjct: 422 SDDDDEDDDDDDD---DNDEDDGDEDDDDEEDEDEDEETP 532
Score = 32.0 bits (71), Expect = 0.87
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DD+V+D D +D D+EDD++ DD E + + +A+ ES +
Sbjct: 296 DDDVNDGEDGDD-----DDEDDEDFSGDDGGEEADSDDDPEANGGGESDDD 433
Score = 31.6 bits (70), Expect = 1.1
Identities = 16/51 (31%), Positives = 24/51 (46%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DD + D+D EA+ E DD+ DDD+ ++ E D D E +
Sbjct: 362 DDGGEEADSDDDPEANGGGESDDDDEDDDDDDDDNDEDDGDEDDDDEEDED 514
Score = 30.0 bits (66), Expect = 3.3
Identities = 14/39 (35%), Positives = 24/39 (60%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYP 630
DD+ D DD+D + D D+ D+D+ +D++ +EE P
Sbjct: 428 DDDEDD--DDDDDDNDEDDGDEDDDDEEDEDEDEETPQP 538
Score = 29.6 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 596 SDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPT 631
SD D++D + D D ++DD DDD +E+ + T
Sbjct: 422 SDDDDEDDDDDDDDNDEDDGDEDDDDEEDEDEDEET 529
Score = 29.3 bits (64), Expect = 5.7
Identities = 15/46 (32%), Positives = 23/46 (49%)
Frame = +2
Query: 594 EVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSES 639
+ D DD+D D +DDDE D+D ++G D+D E+
Sbjct: 275 DTEDDDDDDDVNDGEDGDDDDE--DDEDFSGDDGGEEADSDDDPEA 406
>TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%)
Length = 1495
Score = 36.2 bits (82), Expect = 0.046
Identities = 18/48 (37%), Positives = 29/48 (59%)
Frame = +2
Query: 594 EVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTS 641
++ D DDED E D D+E+++E DDD+ ++E E T S++ S
Sbjct: 1037 DLEDDEDDEDIEED-DDEEEEEDEDDDDDEDDEEESKTKKKSSAPKKS 1177
Score = 35.4 bits (80), Expect = 0.079
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 593 DEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGE 628
DE D DDED E D++E+DD+E D+D+ ++E +
Sbjct: 1025 DEFGDLEDDEDDE-DIEEDDDEEEEEDEDDDDDEDD 1129
Score = 35.0 bits (79), Expect = 0.10
Identities = 15/40 (37%), Positives = 24/40 (59%)
Frame = +2
Query: 603 DAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
D DL++++DDE + +DD+ EEE + D D E S+
Sbjct: 1025 DEFGDLEDDEDDEDIEEDDDEEEEEDEDDDDDEDDEEESK 1144
Score = 30.8 bits (68), Expect = 1.9
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSES 639
DDE + +++D E + ++EDDD DD++ EEE + + + +S
Sbjct: 1046 DDEDDEDIEEDDDEEEEEDEDDD----DDEDDEEESKTKKKSSAPKKS 1177
Score = 30.0 bits (66), Expect = 3.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 601 DEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DE + + DE+D+D DD+ EE+ + D D ES ++
Sbjct: 1025 DEFGDLEDDEDDEDIEEDDDEEEEEDEDDDDDEDDEEESKTK 1150
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 36.2 bits (82), Expect = 0.046
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPT 631
DD+ D DD++ E D DE+D+DE DDD EE + P+
Sbjct: 429 DDDGDDDEDDDNDEDDGDEDDEDE--GDDDEDEESPQPPS 542
Score = 32.7 bits (73), Expect = 0.51
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 580 VDQLIK-MLAAPADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSE 638
+DQL K + + + SD DD+D + D EDD++ D+D ++G D+D E
Sbjct: 225 LDQLCKGKHTSEENKDASDTEDDDDDDNVNDGEDDNDDEEDEDFSGDDGGEEADSDDDPE 404
Query: 639 S 639
+
Sbjct: 405 A 407
Score = 32.0 bits (71), Expect = 0.87
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADS 635
D E + +D + D DE+DD++ D++ E+EG+ D +S
Sbjct: 396 DPEANGGGGSDDDDGDDDEDDDNDEDDGDEDDEDEGDDDEDEES 527
Score = 31.6 bits (70), Expect = 1.1
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 15/66 (22%)
Frame = +3
Query: 592 DDEVSDPADDEDAEAD-----------LDEEDDDEAL----SDDDNVEEEGEYPTDADST 636
DD V+D DD D E D D +DD EA SDDD+ +++ + D D
Sbjct: 300 DDNVNDGEDDNDDEEDEDFSGDDGGEEADSDDDPEANGGGGSDDDDGDDDEDDDNDEDDG 479
Query: 637 SESTSE 642
E +
Sbjct: 480 DEDDED 497
Score = 31.2 bits (69), Expect = 1.5
Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 6/57 (10%)
Frame = +3
Query: 592 DDEVSDPADDEDAEA------DLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DD + D+D EA D D+ DDDE DDDN E++G+ + + + E
Sbjct: 363 DDGGEEADSDDDPEANGGGGSDDDDGDDDE---DDDNDEDDGDEDDEDEGDDDEDEE 524
>TC215452 similar to UP|P93488 (P93488) NAP1Ps, partial (29%)
Length = 609
Score = 36.2 bits (82), Expect = 0.046
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 594 EVSDPADDEDAEADLDE-EDDDEALSDDDNVEEEGEYPTDADSTSES 639
++ D DDED E D DE E+DD+ DDD+ EEE + + + +S
Sbjct: 132 DLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESKTKKKSSAPKKS 272
Score = 35.4 bits (80), Expect = 0.079
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +3
Query: 593 DEVSDPADDEDAE-----ADLDEEDDDEALSDDDNVEE 625
DE D DDED E D DEEDDD+ DDD+ EE
Sbjct: 120 DEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEE 233
Score = 33.9 bits (76), Expect = 0.23
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 603 DAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
D DL++++DDE + +DD+ +EE + D D E S+
Sbjct: 120 DEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESK 239
Score = 29.3 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 24/42 (56%)
Frame = +3
Query: 601 DEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DE + + DE+D+D DD++ E++ + D D ES ++
Sbjct: 120 DEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESKTK 245
>TC215451 weakly similar to UP|Q94K07 (Q94K07) Nucleosome assembly protein,
partial (20%)
Length = 777
Score = 36.2 bits (82), Expect = 0.046
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 594 EVSDPADDEDAEADLDEEDDDEALSDDDNVEEE 626
++ D DDED E D DE+++D+ DDD+ +EE
Sbjct: 83 DLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEE 181
Score = 35.4 bits (80), Expect = 0.079
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +2
Query: 593 DEVSDPADDEDAE-----ADLDEEDDDEALSDDDNVEE 625
DE D DDED E D DEEDDD+ DDD+ EE
Sbjct: 71 DEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEE 184
Score = 33.9 bits (76), Expect = 0.23
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 603 DAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
D DL++++DDE + +DD+ +EE + D D E S+
Sbjct: 71 DEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESK 190
Score = 32.0 bits (71), Expect = 0.87
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGE 628
DDE + +++D E + D++DDD DDD+ EEE +
Sbjct: 92 DDEDDEDIEEDDDEDEEDDDDDD----DDDDDEEESK 190
Score = 29.3 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 24/42 (56%)
Frame = +2
Query: 601 DEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
DE + + DE+D+D DD++ E++ + D D ES ++
Sbjct: 71 DEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESKTK 196
>AI495341
Length = 408
Score = 35.8 bits (81), Expect = 0.060
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +3
Query: 577 KHNVDQLIKMLAAPADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYP 630
KH +D L L P + +++D E+ DLD++DDDE D+++ ++E E P
Sbjct: 9 KHPLDPLPNRLT-PMESDLNDAVFPEE---DLDDDDDDETPEDEEDYDDETEPP 158
>TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 942
Score = 35.8 bits (81), Expect = 0.060
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +1
Query: 593 DEVSDPADDEDA------EADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
+E +DP DD +A ++D D++DD DDDN +++GE + + E E
Sbjct: 475 EEEADPEDDPEANGAGGSDSDGDDDDDGGDDDDDDNGDDDGEDEEEGEDEDEEDEE 642
Score = 33.1 bits (74), Expect = 0.39
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 583 LIKMLAAPADDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
L+ A+ +D++ + DD+DA+ D D+E+ DE S + E + E +A+ S S+
Sbjct: 361 LLNKDASDSDEDGDEEEDDDDAD-DQDDEEGDEDFSGEGEEEADPEDDPEANGAGGSDSD 537
Score = 30.8 bits (68), Expect = 1.9
Identities = 17/57 (29%), Positives = 30/57 (51%), Gaps = 2/57 (3%)
Frame = +1
Query: 588 AAPADDEVSDPADDEDAEADLDEE--DDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
A P DD ++ A D++ D D++ DDD+ + DD+ E+E E + + E +
Sbjct: 484 ADPEDDPEANGAGGSDSDGDDDDDGGDDDDDDNGDDDGEDEEEGEDEDEEDEEDVPQ 654
Score = 30.8 bits (68), Expect = 1.9
Identities = 14/39 (35%), Positives = 21/39 (52%)
Frame = +1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYP 630
DD+ DD+D D D ED++E +D+ EE+ P
Sbjct: 541 DDDDDGGDDDDDDNGDDDGEDEEEGEDEDEEDEEDVPQP 657
Score = 29.3 bits (64), Expect = 5.7
Identities = 41/161 (25%), Positives = 65/161 (39%), Gaps = 16/161 (9%)
Frame = -2
Query: 29 SPSSHSTRVTRSSSGIAAQSSSPGHSPTPKKMRTKQVVTKKKTLRFSPPQDTSP------ 82
SPS + SSS +A SSS SP+ ++ + + K P Q +S
Sbjct: 476 SPSPEKSSSPSSSS*SSASSSSSSSSPS----SSESLASLFKR*VCFPLQRSSKGNLPSI 309
Query: 83 -ISESDTENVADIPDLDIVHAEDLLDLASARVSEPPVQSNVEK-----STSFSEDSVDVH 136
++ DTE + + + + DLA+A++ + S E ST EDS +
Sbjct: 308 GVNFGDTE*LTSVSRDPVRMEKQRRDLAAAKIVSTAMASRTEAM*MFLSTELREDSSSIV 129
Query: 137 DDAPPMKKSVIKTGSAKAPPETSSRK----GKEHVILDSDG 173
D +S IKT + E R+ G E++ L G
Sbjct: 128 IDYKLKIESEIKTQEKRILSERERRERGYVGLEYLTLTVSG 6
Score = 28.5 bits (62), Expect = 9.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSE 638
DD+ D DDE+ + D E ++EA +DD E G +D+D +
Sbjct: 415 DDDADD-QDDEEGDEDFSGEGEEEADPEDD-PEANGAGGSDSDGDDD 549
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 35.8 bits (81), Expect = 0.060
Identities = 15/42 (35%), Positives = 24/42 (56%)
Frame = -3
Query: 601 DEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
+ED + D D++DDD+ DDD+ E+E D D + +E
Sbjct: 451 EEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENE 326
Score = 33.5 bits (75), Expect = 0.30
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 593 DEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
+E + +DED + D++DDDE DDD +E GE + + E E
Sbjct: 463 EENGEEDEDEDGD---DQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEE 323
Score = 33.1 bits (74), Expect = 0.39
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEE 626
DD+ D DD+D E + EE+D++ D++N E+E
Sbjct: 415 DDDEDD--DDDDEEDEAGEEEDEDGAEDEENEEDE 317
Score = 33.1 bits (74), Expect = 0.39
Identities = 14/43 (32%), Positives = 25/43 (57%)
Frame = -3
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDAD 634
+DE D DD+D + D D+E+D+ +D++ E+ E D +
Sbjct: 442 EDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEE 314
Score = 31.2 bits (69), Expect = 1.5
Identities = 14/43 (32%), Positives = 23/43 (52%)
Frame = -3
Query: 592 DDEVSDPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDAD 634
D++ D DD++ + D DEED+ D+D E+E + D
Sbjct: 439 DEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEED 311
Score = 30.4 bits (67), Expect = 2.5
Identities = 14/46 (30%), Positives = 24/46 (51%)
Frame = -3
Query: 597 DPADDEDAEADLDEEDDDEALSDDDNVEEEGEYPTDADSTSESTSE 642
D +D D + D DE+DDD+ D+ EE+ + D ++ + E
Sbjct: 445 DEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEEDE 308
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.310 0.128 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,475,414
Number of Sequences: 63676
Number of extensions: 318956
Number of successful extensions: 3393
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 2277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2797
length of query: 642
length of database: 12,639,632
effective HSP length: 103
effective length of query: 539
effective length of database: 6,081,004
effective search space: 3277661156
effective search space used: 3277661156
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0370.9