BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0370.4
(170 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225608 UP|Q84ZU5 (Q84ZU5) R 8 protein, complete 173 4e-44
TC225617 UP|Q84ZV8 (Q84ZV8) R 3 protein, complete 167 2e-42
TC231702 weakly similar to UP|Q947E1 (Q947E1) Resistance gene an... 167 3e-42
NP595166 R 14 protein [Glycine max] 166 5e-42
TC225611 homologue to UP|Q84ZU6 (Q84ZU6) R 1 protein, complete 164 1e-41
TC225609 UP|Q84ZV3 (Q84ZV3) R 4 protein, complete 164 1e-41
TC231313 UP|Q9FXZ2 (Q9FXZ2) Resistance protein LM12 (Fragment), ... 159 8e-40
TC209219 UP|Q9FVK2 (Q9FVK2) Resistance protein MG13 (Fragment), ... 157 2e-39
NP595167 R 13 protein [Glycine max] 157 2e-39
TC225613 UP|Q9FVK5 (Q9FVK5) Resistance protein LM6 (Fragment), p... 156 4e-39
TC225612 homologue to UP|Q84ZU8 (Q84ZU8) R 10 protein, complete 156 4e-39
TC233820 similar to UP|Q84ZV3 (Q84ZV3) R 4 protein, partial (15%) 153 4e-38
TC221449 UP|Q9FXZ1 (Q9FXZ1) Resistance protein MG23 (Fragment), ... 152 7e-38
AW780852 weakly similar to GP|9965109|gb| resistance protein MG1... 147 2e-36
TC225607 homologue to UP|Q84ZV1 (Q84ZV1) R 9 protein, complete 145 9e-36
TC225615 UP|Q84ZU7 (Q84ZU7) R 5 protein, complete 145 9e-36
CD407621 144 3e-35
TC207788 homologue to UP|Q8W2C0 (Q8W2C0) Functional candidate re... 142 6e-35
TC227721 similar to UP|Q8H0N7 (Q8H0N7) TIR-NBS disease resistanc... 142 8e-35
BI425264 weakly similar to GP|28558777|g MRGH5 {Cucumis melo}, p... 142 8e-35
>TC225608 UP|Q84ZU5 (Q84ZU5) R 8 protein, complete
Length = 3084
Score = 173 bits (438), Expect = 4e-44
Identities = 82/147 (55%), Positives = 109/147 (73%)
Frame = +1
Query: 14 FNYDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVL 73
+NYDVF+SF G+DTR F L+K L +GI TF+DD+ L+ G+ I PALS AI+ES +
Sbjct: 28 YNYDVFLSFTGQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIA 207
Query: 74 IIVLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHE 133
I VLS+NYASS++CLDELV IL C +G LV P+FY V+PSHVRHQKG YGEAMA H+
Sbjct: 208 ITVLSQNYASSSFCLDELVTILHCKSQG--LLVIPVFYKVDPSHVRHQKGSYGEAMAKHQ 381
Query: 134 KKYGINSDRIRTWRSTLNEVCQLVGHH 160
K++ N ++++ WR L++V L G+H
Sbjct: 382 KRFKANKEKLQKWRMALHQVADLSGYH 462
>TC225617 UP|Q84ZV8 (Q84ZV8) R 3 protein, complete
Length = 2697
Score = 167 bits (423), Expect = 2e-42
Identities = 81/145 (55%), Positives = 108/145 (73%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF+SFRG DTRH F L+K L +GI TF+DD+ L G+ I+PALSKAI+ES + I
Sbjct: 34 YDVFLSFRGLDTRHGFTGNLYKALDDRGIYTFIDDQELPRGDEITPALSKAIQESRIAIT 213
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+NYASS++CLDELV +L C R+G LV P+FY+V+PS VR QKG YGEAMA H+K+
Sbjct: 214 VLSQNYASSSFCLDELVTVLLCKRKG--LLVIPVFYNVDPSDVRQQKGSYGEAMAKHQKR 387
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHH 160
+ ++++ WR L++V L G+H
Sbjct: 388 FKAKKEKLQKWRMALHQVADLSGYH 462
>TC231702 weakly similar to UP|Q947E1 (Q947E1) Resistance gene analog NBS7
(Fragment), partial (40%)
Length = 935
Score = 167 bits (422), Expect = 3e-42
Identities = 78/149 (52%), Positives = 111/149 (74%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
+DVF+SFRGEDTR+TF L+ L R ++T++D+E L+ G+ ISP+L +AI+++ V +I
Sbjct: 37 HDVFLSFRGEDTRYTFTSHLYAALTRLQVKTYIDNE-LERGDEISPSLLRAIDDAKVAVI 213
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
V S+NYASS WCLDELVKI+EC R+ N Q++ P+FYHV+P+HVRHQ G YG A A HE++
Sbjct: 214 VFSENYASSRWCLDELVKIMECKRK-NGQIIVPVFYHVDPTHVRHQTGSYGHAFAMHEQR 390
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHHISTT 164
+ N ++++TWR L EV + G TT
Sbjct: 391 FVGNMNKVQTWRLVLGEVANISGWDCLTT 477
>NP595166 R 14 protein [Glycine max]
Length = 1926
Score = 166 bits (420), Expect = 5e-42
Identities = 81/147 (55%), Positives = 105/147 (71%)
Frame = +1
Query: 14 FNYDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVL 73
F YDVF+SFRGEDTR+ F L++ L KGI TF D+E L G+ I+PALSKAI+ES +
Sbjct: 28 FIYDVFLSFRGEDTRYGFTGNLYRALCEKGIHTFFDEEKLHGGDEITPALSKAIQESRIA 207
Query: 74 IIVLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHE 133
I VLS+NYA S++CLDELV IL C G LV P+FY+V+PS +RHQKG YGEAM H+
Sbjct: 208 ITVLSQNYAFSSFCLDELVTILHCKSEG--LLVIPVFYNVDPSDLRHQKGSYGEAMIKHQ 381
Query: 134 KKYGINSDRIRTWRSTLNEVCQLVGHH 160
K++ ++++ WR L +V L GHH
Sbjct: 382 KRFESKMEKLQKWRMALKQVADLSGHH 462
>TC225611 homologue to UP|Q84ZU6 (Q84ZU6) R 1 protein, complete
Length = 2709
Score = 164 bits (416), Expect = 1e-41
Identities = 80/145 (55%), Positives = 108/145 (74%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF++FRGEDTR+ F L+K L KGI TF D++ L +G+ I+PALSKAI+ES + I
Sbjct: 34 YDVFLNFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGDDITPALSKAIQESRIAIT 213
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+NYASS++CLDELV IL C R G LV P+F++V+PS VRH KG YGEAMA H+K+
Sbjct: 214 VLSQNYASSSFCLDELVTILHCKREG--LLVIPVFHNVDPSAVRHLKGSYGEAMAKHQKR 387
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHH 160
+ ++++ WR L++V L G+H
Sbjct: 388 FKAKKEKLQKWRMALHQVADLSGYH 462
>TC225609 UP|Q84ZV3 (Q84ZV3) R 4 protein, complete
Length = 2688
Score = 164 bits (416), Expect = 1e-41
Identities = 81/145 (55%), Positives = 104/145 (70%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF+SFRG DTRH F L+K L +GI T +DD+ L G+ I+PALSKAI+ES + I
Sbjct: 34 YDVFLSFRGLDTRHGFTGNLYKALDDRGIYTSIDDQELPRGDEITPALSKAIQESRIAIT 213
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+NYASS++CLDELV IL C G LV P+FY V+PS VRHQKG YGEAMA H+K+
Sbjct: 214 VLSQNYASSSFCLDELVTILHCKSEG--LLVIPVFYKVDPSDVRHQKGSYGEAMAKHQKR 387
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHH 160
+ ++++ WR L +V L G+H
Sbjct: 388 FKAKKEKLQKWRMALKQVADLSGYH 462
>TC231313 UP|Q9FXZ2 (Q9FXZ2) Resistance protein LM12 (Fragment), complete
Length = 1314
Score = 159 bits (401), Expect = 8e-40
Identities = 76/156 (48%), Positives = 107/156 (67%), Gaps = 1/156 (0%)
Frame = +1
Query: 11 LHIFNYDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEES 70
L F+YDVF+SFRGEDTR+ F L+ L+ +GI TF+DD+ + G+ I+ AL AIE+S
Sbjct: 7 LRSFSYDVFLSFRGEDTRYGFTGYLYNVLRERGIHTFIDDDEPQEGDEITTALEAAIEKS 186
Query: 71 MVLIIVLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMA 130
+ IIVLS+NYASS++CL+ L IL ++ N LV P+FY V PS VRH +G +GEA+A
Sbjct: 187 KIFIIVLSENYASSSFCLNSLTHILNFTKENNDVLVLPVFYRVNPSDVRHHRGSFGEALA 366
Query: 131 AHEKKYGINS-DRIRTWRSTLNEVCQLVGHHISTTG 165
HEKK N+ +++ TW+ L++V + GHH G
Sbjct: 367 NHEKKSNSNNMEKLETWKMALHQVSNISGHHFQHDG 474
>TC209219 UP|Q9FVK2 (Q9FVK2) Resistance protein MG13 (Fragment), complete
Length = 1224
Score = 157 bits (398), Expect = 2e-39
Identities = 78/150 (52%), Positives = 102/150 (68%)
Frame = +3
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF+SFRG DTR+ F L+K L KG TF D++ L +G I+PAL KAI++S V II
Sbjct: 63 YDVFLSFRGTDTRYGFTGNLYKALCDKGFHTFFDEDKLHSGEEITPALLKAIQDSRVAII 242
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+NYA S++CLDELV I C R G LV P+FY V+PS+VRHQKG YGEAM H+++
Sbjct: 243 VLSENYAFSSFCLDELVTIFHCKREG--LLVIPVFYKVDPSYVRHQKGSYGEAMTKHQER 416
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHHISTTG 165
+ ++++ WR L +V L G H G
Sbjct: 417 FKDKMEKLQEWRMALKQVADLSGSHFKDGG 506
>NP595167 R 13 protein [Glycine max]
Length = 1926
Score = 157 bits (397), Expect = 2e-39
Identities = 78/145 (53%), Positives = 100/145 (68%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF+SFRG DTR+ F L+K L +GI TF+DD+ L G+ I+PALS AI ES + I
Sbjct: 34 YDVFLSFRGLDTRNGFTGNLYKALGDRGIYTFIDDQELPRGDKITPALSNAINESRIAIT 213
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+NYA S++CLDELV IL C G LV P+FY V+PS VRHQKG YGE M H+K+
Sbjct: 214 VLSENYAFSSFCLDELVTILHCKSEG--LLVIPVFYKVDPSDVRHQKGSYGETMTKHQKR 387
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHH 160
+ +++R WR L +V L G+H
Sbjct: 388 FESKMEKLREWRMALQQVADLSGYH 462
>TC225613 UP|Q9FVK5 (Q9FVK5) Resistance protein LM6 (Fragment), partial (98%)
Length = 2597
Score = 156 bits (395), Expect = 4e-39
Identities = 75/137 (54%), Positives = 100/137 (72%)
Frame = +1
Query: 24 GEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLIIVLSKNYAS 83
G+DTR F L+K L +GI TF+DD+ L+ G+ I PALS AI+ES + I VLS+NYAS
Sbjct: 7 GQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIAITVLSQNYAS 186
Query: 84 STWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKKYGINSDRI 143
S++CLDELV IL C +G LV P+FY V+PSHVRHQKG YGEAMA H+K++ N +++
Sbjct: 187 SSFCLDELVTILHCKSQG--LLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRFKANKEKL 360
Query: 144 RTWRSTLNEVCQLVGHH 160
+ WR L++V L G+H
Sbjct: 361 QKWRMALHQVADLSGYH 411
>TC225612 homologue to UP|Q84ZU8 (Q84ZU8) R 10 protein, complete
Length = 2706
Score = 156 bits (395), Expect = 4e-39
Identities = 77/145 (53%), Positives = 101/145 (69%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF++FRG DTR+ F L++ L KGI TF D++ L G I+PAL KAI+ES + I
Sbjct: 34 YDVFLNFRGGDTRYGFTGNLYRALCDKGIHTFFDEKKLHRGEEITPALLKAIQESRIAIT 213
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLSKNYASS++CLDELV IL C G LV P+FY+V+PS VRHQKG YG MA H+K+
Sbjct: 214 VLSKNYASSSFCLDELVTILHCKSEG--LLVIPVFYNVDPSDVRHQKGSYGVEMAKHQKR 387
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHH 160
+ ++++ WR L +V L G+H
Sbjct: 388 FKAKKEKLQKWRIALKQVADLCGYH 462
>TC233820 similar to UP|Q84ZV3 (Q84ZV3) R 4 protein, partial (15%)
Length = 471
Score = 153 bits (386), Expect = 4e-38
Identities = 74/136 (54%), Positives = 101/136 (73%)
Frame = +1
Query: 15 NYDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLI 74
NYDVF+SFRGEDTR+ F L+ L+ KGI TF+DDE L+ G I+PAL KAI++S V I
Sbjct: 64 NYDVFLSFRGEDTRNAFTGHLYNTLQSKGIHTFIDDEKLQRGEQITPALMKAIQDSRVAI 243
Query: 75 IVLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEK 134
VLS++YASS++CLDEL IL C +R + LV P+FY V+PS VRHQKG YGEA+A E+
Sbjct: 244 TVLSEHYASSSFCLDELATILHCDQR-KRLLVIPVFYKVDPSDVRHQKGSYGEALAKLER 420
Query: 135 KYGINSDRIRTWRSTL 150
++ + ++++ W+ L
Sbjct: 421 RFQHDPEKLQNWKMAL 468
>TC221449 UP|Q9FXZ1 (Q9FXZ1) Resistance protein MG23 (Fragment), complete
Length = 1307
Score = 152 bits (384), Expect = 7e-38
Identities = 73/152 (48%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Frame = +1
Query: 15 NYDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLI 74
+YDVF+SFRGEDTRH F L+ L+ +GI TF+DDE L+ G+ I+ AL +AIE+S + I
Sbjct: 19 SYDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFI 198
Query: 75 IVLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEK 134
IVLS+NYASS++CL+EL IL ++ + + + P+FY V+PS VR+ +G +GEA+A HEK
Sbjct: 199 IVLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEK 378
Query: 135 KYGIN-SDRIRTWRSTLNEVCQLVGHHISTTG 165
K N ++++ W+ L +V GHH G
Sbjct: 379 KLKSNYMEKLQIWKMALQQVSNFSGHHFQPDG 474
>AW780852 weakly similar to GP|9965109|gb| resistance protein MG13 {Glycine
max}, partial (29%)
Length = 441
Score = 147 bits (371), Expect = 2e-36
Identities = 70/129 (54%), Positives = 96/129 (74%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF+SF GEDTR+TF L+ +R+G + F+DDE L++GN IS L +AIE S + I+
Sbjct: 55 YDVFLSFTGEDTRYTFTGFLYNAFRREGFKIFMDDEELESGNQISQKLMRAIESSKISIV 234
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+NYA STWCLDEL KI+EC + N Q+V+PIFY+V+ S V +Q YGEAM HEK+
Sbjct: 235 VLSENYAYSTWCLDELAKIIECMKT-NNQMVWPIFYNVQKSDVCNQTKSYGEAMTEHEKR 411
Query: 136 YGINSDRIR 144
G +S++++
Sbjct: 412 IGKDSEKVQ 438
>TC225607 homologue to UP|Q84ZV1 (Q84ZV1) R 9 protein, complete
Length = 1063
Score = 145 bits (366), Expect = 9e-36
Identities = 71/145 (48%), Positives = 101/145 (68%)
Frame = +3
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF++FRGEDTR+ F L++ L KGIRTF D+E L +G I+PAL KAI++S + I
Sbjct: 60 YDVFLNFRGEDTRYGFTSNLYRALSDKGIRTFFDEEKLHSGEEITPALLKAIKDSRIAIT 239
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+++ASS++CLDEL I+ C++ N ++ P+FY V PS VRHQKG YGEA+A H+ +
Sbjct: 240 VLSEDFASSSFCLDELTSIVHCAQY-NGMMIIPVFYKVYPSDVRHQKGTYGEALAKHKIR 416
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHH 160
+ ++ + W L +V L G H
Sbjct: 417 F---PEKFQNWEMALRQVADLSGFH 482
>TC225615 UP|Q84ZU7 (Q84ZU7) R 5 protein, complete
Length = 2724
Score = 145 bits (366), Expect = 9e-36
Identities = 74/145 (51%), Positives = 101/145 (69%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF+SFRGEDTR+ F L+K L KGI TF D++ L +G I+PAL KAI++S + I
Sbjct: 34 YDVFLSFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGEEITPALLKAIQDSRIAIT 213
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+++ASS++CLDEL IL C++ N +V P+FY V P VRHQKG YGEA+A H+K+
Sbjct: 214 VLSEDFASSSFCLDELATILFCAQY-NGMMVIPVFYKVYPCDVRHQKGTYGEALAKHKKR 390
Query: 136 YGINSDRIRTWRSTLNEVCQLVGHH 160
+ D+++ W L +V L G H
Sbjct: 391 F---PDKLQKWERALRQVANLSGLH 456
>CD407621
Length = 571
Score = 144 bits (362), Expect = 3e-35
Identities = 70/143 (48%), Positives = 93/143 (64%)
Frame = -3
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVFISFRG DTR+TFV L+ L RKGI F DDE L+ G IS L +AI++S + II
Sbjct: 566 YDVFISFRGPDTRNTFVDHLYAHLLRKGIFVFKDDEKLQKGESISAQLLQAIQDSRLSII 387
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
V SK YASSTWCLDE+ I +C ++ N V+P+FY V+PSHVRHQ G Y A +H +
Sbjct: 386 VFSKQYASSTWCLDEMAAIADCKQQSN-PTVFPVFYDVDPSHVRHQNGAYEVAFVSHRSR 210
Query: 136 YGINSDRIRTWRSTLNEVCQLVG 158
+ + D++ W + ++ G
Sbjct: 209 FREDPDKVDRWARAMTDLAHSAG 141
>TC207788 homologue to UP|Q8W2C0 (Q8W2C0) Functional candidate resistance
protein KR1, complete
Length = 3949
Score = 142 bits (359), Expect = 6e-35
Identities = 73/149 (48%), Positives = 103/149 (68%), Gaps = 2/149 (1%)
Frame = +1
Query: 14 FNYDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVL 73
F+ DVF+SFRGEDTR F L+K L +GI TF+DD+ + G+ I+ L KAIEES +
Sbjct: 139 FSNDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIF 318
Query: 74 IIVLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHE 133
IIVLS+NYASS++CL+EL IL+ +G L+ P+FY V+PS VR+ G +G+A+ HE
Sbjct: 319 IIVLSENYASSSFCLNELDYILKFI-KGKGILILPVFYKVDPSDVRNHTGSFGKALTNHE 495
Query: 134 KKYGINSD--RIRTWRSTLNEVCQLVGHH 160
KK+ +D ++ TW+ LN+V L G+H
Sbjct: 496 KKFKSTNDMEKLETWKMALNKVANLSGYH 582
>TC227721 similar to UP|Q8H0N7 (Q8H0N7) TIR-NBS disease resistance protein,
partial (19%)
Length = 1015
Score = 142 bits (358), Expect = 8e-35
Identities = 73/144 (50%), Positives = 96/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
++VF+SFRGEDTR+TF LH L R + T++D L+ G IS +L +AIEE+ + ++
Sbjct: 98 HEVFLSFRGEDTRYTFTGHLHASLTRLQVNTYIDYN-LQRGEEISSSLLRAIEEAKLSVV 274
Query: 76 VLSKNYASSTWCLDELVKILECSR-RGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEK 134
V SKNY +S WCLDEL+KILEC RG Q+V PIFY ++PSHVR+Q G Y EA A HEK
Sbjct: 275 VFSKNYGNSKWCLDELLKILECKNMRG--QIVLPIFYDIDPSHVRNQTGTYAEAFAKHEK 448
Query: 135 KYGINSDRIRTWRSTLNEVCQLVG 158
D+++ WR L E L G
Sbjct: 449 HLQGQMDKVQKWRVALREAANLSG 520
>BI425264 weakly similar to GP|28558777|g MRGH5 {Cucumis melo}, partial (9%)
Length = 421
Score = 142 bits (358), Expect = 8e-35
Identities = 70/138 (50%), Positives = 100/138 (71%)
Frame = +1
Query: 16 YDVFISFRGEDTRHTFVKILHKELKRKGIRTFVDDEMLKAGNVISPALSKAIEESMVLII 75
YDVF+ FRGEDTR+TF L+ L++ +RTF DD K+G+ I + +AI+ES + I+
Sbjct: 13 YDVFLCFRGEDTRYTFTGNLYAALRQARLRTFFDDGF-KSGDQIFDVVLQAIQESRISIV 189
Query: 76 VLSKNYASSTWCLDELVKILECSRRGNQQLVYPIFYHVEPSHVRHQKGKYGEAMAAHEKK 135
VLS+N+ASS+WCL+ELVKILEC R +QLV PIFY ++PS VR Q G YGE++A H+ +
Sbjct: 190 VLSENFASSSWCLEELVKILEC-RETKKQLVIPIFYRMDPSDVRRQTGCYGESLAQHQYE 366
Query: 136 YGINSDRIRTWRSTLNEV 153
+ +S+++R W+ L V
Sbjct: 367 FRSDSEKVRNWQEALTHV 420
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.326 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,605,849
Number of Sequences: 63676
Number of extensions: 98487
Number of successful extensions: 706
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of query: 170
length of database: 12,639,632
effective HSP length: 90
effective length of query: 80
effective length of database: 6,908,792
effective search space: 552703360
effective search space used: 552703360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Lotus: description of TM0370.4