TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0367.7
         (172 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC230135 similar to UP|Q71F77 (Q71F77) TK1-like deoxyribonucleos...   250  3e-67
TC229439 weakly similar to UP|Q9LUG6 (Q9LUG6) Dual-specificity p...    30  0.56
TC205279 homologue to PRF|2206327A.0|1587206|2206327A T complex ...    29  0.96
TC229496 weakly similar to UP|Q26882 (Q26882) Surface coat glyco...    27  3.6
TC217330 similar to UP|Q9FH92 (Q9FH92) Emb|CAB62301.1 (At5g67210...    27  6.2
TC209122 similar to UP|Q93VB2 (Q93VB2) AT3g62770/F26K9_200, part...    26  8.1

>TC230135 similar to UP|Q71F77 (Q71F77) TK1-like deoxyribonucleoside kinase
           , partial (78%)
          Length = 865

 Score =  250 bits (638), Expect = 3e-67
 Identities = 121/165 (73%), Positives = 142/165 (85%)
 Frame = +3

Query: 1   NVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFF 60
           NV ++KSSKDTRY +DS+VTHDG K PC AL +L SF++K G DAY++LDVIGIDEAQFF
Sbjct: 168 NVVLLKSSKDTRYAIDSVVTHDGIKFPCRALPDLLSFREKHGDDAYQKLDVIGIDEAQFF 347

Query: 61  DDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAF 120
           +DLY+FC +AAD DGKTV+VAGLDG+YLRR+FGSVL IIPLADSVTKLTARCE+CGK AF
Sbjct: 348 EDLYEFCCKAADEDGKTVIVAGLDGDYLRRSFGSVLHIIPLADSVTKLTARCELCGKRAF 527

Query: 121 FTLRKTQETQVELIGGVDVYMPVCRQHYVNGQVAMETTRLVLESQ 165
           FTLRKT++ + ELIGG D+YMPVCR HY+N QVA    R VLESQ
Sbjct: 528 FTLRKTEQRETELIGGADLYMPVCRLHYLNSQVA---ERSVLESQ 653


>TC229439 weakly similar to UP|Q9LUG6 (Q9LUG6) Dual-specificity protein
           phosphatase-like protein, partial (72%)
          Length = 824

 Score = 30.0 bits (66), Expect = 0.56
 Identities = 14/37 (37%), Positives = 23/37 (61%), Gaps = 3/37 (8%)
 Frame = +1

Query: 46  YEQLDVIGIDEA---QFFDDLYDFCREAADHDGKTVV 79
           Y+ +DV+  D+    Q+F++ +DF  EA  HDG  +V
Sbjct: 310 YKIIDVVDKDDEDLKQYFNECFDFIDEAKRHDGGVLV 420


>TC205279 homologue to PRF|2206327A.0|1587206|2206327A T complex protein.
           {Cucumis sativus;} , partial (52%)
          Length = 838

 Score = 29.3 bits (64), Expect = 0.96
 Identities = 12/43 (27%), Positives = 23/43 (52%)
 Frame = +3

Query: 38  KQKFGVDAYEQLDVIGIDEAQFFDDLYDFCREAADHDGKTVVV 80
           K K  +D  E+   + + E ++FDD+   C++     G T+V+
Sbjct: 360 KHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDV----GATLVI 476


>TC229496 weakly similar to UP|Q26882 (Q26882) Surface coat glycoprotein
           TES-120, partial (19%)
          Length = 1079

 Score = 27.3 bits (59), Expect = 3.6
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 43  VDAYEQLDVIGIDEAQFFDDLYDFCREAADHDGKTVVVAG 82
           VDA+E+L+  GI+E +  D   D   E +D    TVV  G
Sbjct: 366 VDAFEELNDNGIEENEEEDSEADVMSEGSDGIPNTVVNVG 247


>TC217330 similar to UP|Q9FH92 (Q9FH92) Emb|CAB62301.1 (At5g67210), partial
           (87%)
          Length = 1091

 Score = 26.6 bits (57), Expect = 6.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 49  LDVIGIDEAQFFDDLYDFCREAADHDGKTVVVAG 82
           L VIGID   FF ++        D DG +VVV G
Sbjct: 494 LHVIGIDFRVFFFEVRGVVPVFIDEDGSSVVVEG 393


>TC209122 similar to UP|Q93VB2 (Q93VB2) AT3g62770/F26K9_200, partial (28%)
          Length = 692

 Score = 26.2 bits (56), Expect = 8.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 70  AADHDGKTVVVAGLDGNYLRRNFGS 94
           A  H   TVV+ G+DG++ R  F S
Sbjct: 319 AFGHQKNTVVILGMDGSFYRCQFDS 393


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.322    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,794,659
Number of Sequences: 63676
Number of extensions: 78351
Number of successful extensions: 327
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of query: 172
length of database: 12,639,632
effective HSP length: 91
effective length of query: 81
effective length of database: 6,845,116
effective search space: 554454396
effective search space used: 554454396
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)