BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0347b.5
(861 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC222674 similar to UP|Q6PSU8 (Q6PSU8) Formin homology 2 domain-... 114 1e-43
TC224220 weakly similar to UP|Q9FJX6 (Q9FJX6) Formin-like protei... 162 5e-40
TC211712 similar to UP|Q9FJX6 (Q9FJX6) Formin-like protein, part... 153 4e-37
TC231398 similar to GB|AAF14548.1|6503010|AF174427 formin-like p... 141 1e-33
TC223874 similar to GB|AAF14548.1|6503010|AF174427 formin-like p... 110 3e-24
BM085578 similar to GP|9757868|dbj| formin-like protein {Arabido... 102 6e-22
TC230809 weakly similar to UP|Q6PSU8 (Q6PSU8) Formin homology 2 ... 89 8e-18
AI437770 similar to GP|9757868|dbj| formin-like protein {Arabido... 79 4e-17
TC209937 86 5e-17
TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein ... 72 8e-13
TC224645 homologue to UP|Q41707 (Q41707) Extensin class 1 protei... 69 7e-12
BF008961 weakly similar to GP|9757868|dbj| formin-like protein {... 69 1e-11
TC230101 similar to UP|Q41707 (Q41707) Extensin class 1 protein ... 66 6e-11
TC224765 similar to UP|Q09082 (Q09082) Extensin (Class I), parti... 64 2e-10
TC204046 UP|Q39835 (Q39835) Extensin, complete 62 8e-10
TC206712 similar to GB|AAT41855.1|48310625|BT014872 At2g19340 {A... 62 8e-10
BF424573 59 7e-09
TC215424 similar to UP|Q9MA04 (Q9MA04) F20B17.16, partial (26%) 58 2e-08
TC204052 homologue to UP|Q39835 (Q39835) Extensin, partial (67%) 58 2e-08
TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich prote... 57 3e-08
>TC222674 similar to UP|Q6PSU8 (Q6PSU8) Formin homology 2 domain-containing
protein 5, partial (15%)
Length = 613
Score = 114 bits (286), Expect(2) = 1e-43
Identities = 69/132 (52%), Positives = 88/132 (66%), Gaps = 9/132 (6%)
Frame = +2
Query: 613 LEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGG- 671
L+ + NRMN GT RG A++FKLDTLLKL D+KGTDGKTTLLHFVV EIIRSEG
Sbjct: 191 LKPFSKLANRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAI 370
Query: 672 ESANESVQNQT--------NSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSY 723
A ES ++ + +++ ED + + GLQVV+ LS +L NVKKAA +D+D L+
Sbjct: 371 RKAKESQKSSSIKLDDLHDSTRETEDRYHEIGLQVVSRLSSELENVKKAAIIDADSLTGT 550
Query: 724 VSKLEMGLDKVR 735
+KL GL K R
Sbjct: 551 TAKLGHGLIKTR 586
Score = 81.6 bits (200), Expect(2) = 1e-43
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = +1
Query: 551 SKLGSAERFLKAVLDIPLAFKRVEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFF 610
S+LG A+RFLKA++DIP AFKR+E +L+ + + E+ + +SF LE A +EL+NSRLF
Sbjct: 4 SQLGPADRFLKAMVDIPFAFKRMEFLLFMGSLKEELATIMESFAILEVACKELRNSRLFL 183
Query: 611 KLLEAVLRTG 620
KLLEAVL+TG
Sbjct: 184 KLLEAVLKTG 213
>TC224220 weakly similar to UP|Q9FJX6 (Q9FJX6) Formin-like protein, partial
(7%)
Length = 785
Score = 162 bits (411), Expect = 5e-40
Identities = 82/104 (78%), Positives = 87/104 (82%)
Frame = +2
Query: 758 KDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEEVHPFRIFMIVRDFLNILDQVCKEV 817
K EE+ IK RR VKEVT+YFHGD AKEE HP RIFM+VRDFLN LDQVCKEV
Sbjct: 20 KXXEEEXXRIKAXXRRPXXXVKEVTKYFHGDAAKEEAHPXRIFMVVRDFLNSLDQVCKEV 199
Query: 818 GRMQDRTVIGSARSFRIAANASLPVLNRYHARQDRSSDEESLSP 861
GRMQDRTVIGSARSFRIAA+ASLPVLN+YHARQDRSSDEE LSP
Sbjct: 200 GRMQDRTVIGSARSFRIAASASLPVLNKYHARQDRSSDEEGLSP 331
>TC211712 similar to UP|Q9FJX6 (Q9FJX6) Formin-like protein, partial (10%)
Length = 784
Score = 153 bits (386), Expect = 4e-37
Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Frame = +2
Query: 758 KDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEEVHPFRIFMIVRDFLNILDQVCKEV 817
K AE++I+ IK DER+AL+LVKEVTEYFHG+ KEE HP RIFMIVRDFLNILD VCKEV
Sbjct: 2 KYAEDEIVRIKADERKALYLVKEVTEYFHGNATKEEAHPLRIFMIVRDFLNILDLVCKEV 181
Query: 818 GRMQDRTVIGSARSFRIAANASLPVLNRY-HARQDRSSDEESLSP 861
+M DR V GS RSFRI NASLPVLNRY H +QDRSSDEES SP
Sbjct: 182 EKMHDRIVGGSGRSFRIPPNASLPVLNRYNHPKQDRSSDEESSSP 316
>TC231398 similar to GB|AAF14548.1|6503010|AF174427 formin-like protein AHF1
{Arabidopsis thaliana;} , partial (11%)
Length = 861
Score = 141 bits (355), Expect = 1e-33
Identities = 73/137 (53%), Positives = 102/137 (74%), Gaps = 4/137 (2%)
Frame = +1
Query: 699 VAGLSRDLGNVKKAAGMDSDVLSSYVSKLEMGLDKVRLVLQYQKP----DMQGSFFNATE 754
V+GLS +L NVKKAA MDSDVLSS V+KL G++KV V++ + + F +A +
Sbjct: 1 VSGLSGELTNVKKAAAMDSDVLSSDVAKLSRGIEKVVQVVKLNEELPLKETNKKFSDAMK 180
Query: 755 IFLKDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEEVHPFRIFMIVRDFLNILDQVC 814
FL+ E+++ I+ E+ AL VKE+T+YFHG++AKEE HPFRIFM+VRDFL+ILD VC
Sbjct: 181 GFLERGEQELSTIQAQEKNALSSVKEITQYFHGNSAKEEAHPFRIFMVVRDFLSILDGVC 360
Query: 815 KEVGRMQDRTVIGSARS 831
KEVG++ +RT++GS +S
Sbjct: 361 KEVGKVNERTLVGSRQS 411
>TC223874 similar to GB|AAF14548.1|6503010|AF174427 formin-like protein AHF1
{Arabidopsis thaliana;} , partial (11%)
Length = 562
Score = 110 bits (275), Expect = 3e-24
Identities = 55/107 (51%), Positives = 75/107 (69%), Gaps = 2/107 (1%)
Frame = +3
Query: 756 FLKDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEEVHPFRIFMIVRDFLNILDQVCK 815
F++ AEE+I+ ++ E AL LVKE+TEYFHG+ +KEE HPFRIFM+VRDFL +LD+VCK
Sbjct: 96 FMRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCK 275
Query: 816 EVGRMQDRTVIGSARSFRIAANASL--PVLNRYHARQDRSSDEESLS 860
EVG + +RT++ SA F + N L P+ RQ SSD++ S
Sbjct: 276 EVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYNSSDDDDSS 416
>BM085578 similar to GP|9757868|dbj| formin-like protein {Arabidopsis
thaliana}, partial (6%)
Length = 424
Score = 102 bits (255), Expect = 6e-22
Identities = 61/134 (45%), Positives = 77/134 (56%), Gaps = 11/134 (8%)
Frame = +3
Query: 336 PLAPNMASLNTPPPPPPPPPPPAA-----RKVWS-PAITTMHSSSVSKQQQ---SSSSIE 386
P+AP+ + L PPPPPPPPPPP RK W P+ T VS+ S
Sbjct: 18 PIAPSSSVLAPPPPPPPPPPPPPLAVPRQRKQWEMPSPLTPVDQPVSRPPPLTPPSRPFV 197
Query: 387 GDASSNGVSSVSVSKPSEEG--ESMMEGGKPKLKALHWDKVRATSNRATVWNQLKSSSFQ 444
+ VS V + S + E E KPKLK LHWDKVRA+S+R VW+QL+SSSF+
Sbjct: 198 LQTPNTKVSPVELPPASSQNFEEGSEETSKPKLKPLHWDKVRASSDREMVWDQLRSSSFK 377
Query: 445 LNEDMMETLFGFNS 458
LNE+M+ETLF N+
Sbjct: 378 LNEEMIETLFVVNT 419
Score = 38.5 bits (88), Expect = 0.013
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 28 ILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPP----DQALTQPPPSASIA 83
+L P+ P+ S P PPPPPP P ++ P P DQ +++PPP
Sbjct: 6 VLSVPIAPSSSVLAPPPPPPPPPPPPPLAVPRQRKQWEMPSPLTPVDQPVSRPPP----- 170
Query: 84 YPTATKPAKP 93
T P++P
Sbjct: 171---LTPPSRP 191
>TC230809 weakly similar to UP|Q6PSU8 (Q6PSU8) Formin homology 2
domain-containing protein 5, partial (14%)
Length = 913
Score = 89.0 bits (219), Expect = 8e-18
Identities = 50/133 (37%), Positives = 86/133 (64%), Gaps = 2/133 (1%)
Frame = +2
Query: 695 GLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEMGLDKVRLVLQYQKPDMQ--GSFFNA 752
GLQVV+ LS +L NVKKAA +D+D L+ +KL GL K R ++ +++ F
Sbjct: 62 GLQVVSRLSSELENVKKAAIIDADSLTGTTAKLGHGLIKTRDLVNKSMKNVEEDRGFCET 241
Query: 753 TEIFLKDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEEVHPFRIFMIVRDFLNILDQ 812
+ F+++AE ++ + ++E++ + LVK +YFHG++ K+E R+F++VRDFL ++D+
Sbjct: 242 VKSFVQNAEADVMKLLEEEKKIVALVKSTGDYFHGNSGKDE--GTRLFIVVRDFLIMVDK 415
Query: 813 VCKEVGRMQDRTV 825
VC EV + ++V
Sbjct: 416 VCNEVRDTKKKSV 454
>AI437770 similar to GP|9757868|dbj| formin-like protein {Arabidopsis
thaliana}, partial (4%)
Length = 442
Score = 79.3 bits (194), Expect(2) = 4e-17
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +3
Query: 361 KVWSPAIT-TMHSSSVSKQQQSSSSIEGDASSNGVS-SVSVSKPSEEGESMMEGGKPKLK 418
K+ SPA++ + +S+SV +Q S S+GV S SVS + +G KPKLK
Sbjct: 3 KLVSPAVSASSNSASVKRQSWSPVQCSVTKGSDGVEQSQSVSSSERHEANDTDGAKPKLK 182
Query: 419 ALHWDKVRATSNRATVWNQLKSSSFQ 444
ALHWDKVRATS+RATVW+Q+KSSSFQ
Sbjct: 183 ALHWDKVRATSDRATVWDQIKSSSFQ 260
Score = 27.7 bits (60), Expect(2) = 4e-17
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 444 QLNEDMMETLFGFNSTTNSAPKE 466
+LNEDMME+LFG +T PKE
Sbjct: 368 RLNEDMMESLFGCTATI-FTPKE 433
>TC209937
Length = 623
Score = 86.3 bits (212), Expect = 5e-17
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 416 KLKALHWDKVRATSNRATVWNQLKSSSF-----QLNEDMMETLFGFNSTTNSAPKETTTT 470
KLK LHW K+ + + + ++W + + S +++ +E LF + A K +
Sbjct: 59 KLKPLHWLKL-SRAVQGSLWAETQKSGEASKAPEIDLSELENLFSAAVPSGPAKKSNVQS 235
Query: 471 SVVRKPVFPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETL 530
S P + ++++ +++ N I+L + V ++ ++L L + +E L
Sbjct: 236 SA------GPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENL 397
Query: 531 VKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPLAFKRVEAMLYRANFETEVNYLR 590
+K PTKEE LK Y+G+ KLG E+FL ++ +P ++ ++ F ++V+ LR
Sbjct: 398 IKFCPTKEEMELLKGYNGEKEKLGRCEQFLMELMKVPRVESKLRVFSFKIQFNSQVSDLR 577
Query: 591 KSFQTLEAASEELKN 605
S + AASEE++N
Sbjct: 578 NSLSVVNAASEEIRN 622
>TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (67%)
Length = 1240
Score = 72.4 bits (176), Expect = 8e-13
Identities = 90/356 (25%), Positives = 118/356 (32%), Gaps = 10/356 (2%)
Frame = +3
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPP-----PPDQA 72
P + P H P P+ S PPP PPP +PS P ++ PP PP
Sbjct: 69 PPSPIPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYY 248
Query: 73 LTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSS 132
+ PPPS S P K P V + Y + +
Sbjct: 249 HSPPPPSPSPPPPYYYKSPPPPSPVPKPP---------------YYYHSPPPPSPSPPPP 383
Query: 133 ENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLA 192
+K P +P PPPP Y + P + V
Sbjct: 384 YYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPP---YYYHSPPPPKEHVHPP--------- 527
Query: 193 SNYRYRPSPELQPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDD 252
Y Y P P PP PP SPP S S P +HSP S S
Sbjct: 528 --YYYHSPPPPSPSPP---PPYYYKSPPPPSPSPPPPYY--------YHSPPPPSPSPPP 668
Query: 253 NNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPP 312
YY HS P+ + P+ ++ P S S P P +P PP P
Sbjct: 669 PYYY-----HSPPP---PSPSPPPPYYYKSPPPP--SPSPPP------PYYYQSPPPPSP 800
Query: 313 APPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPP-----PPPPPPPPAARKVW 363
P P + P+ P H ++P S + PPP PPPP P PA + ++
Sbjct: 801 TPHPPYYYKSPPPPTSHPP-PYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKYIY 965
Score = 70.5 bits (171), Expect = 3e-12
Identities = 62/219 (28%), Positives = 75/219 (33%), Gaps = 16/219 (7%)
Frame = +3
Query: 155 SPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPD 214
SP P P PP + Y PS + Y Y+ P P+P KPP
Sbjct: 108 SPPPPSPSPPPPYYYKSPPPPSPSPPPP------------YYYKSPPPPSPVP---KPPY 242
Query: 215 EIHSPPAASSS--------SPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVA 266
HSPP S S SP +HSP S S YY S
Sbjct: 243 YYHSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSP 422
Query: 267 NGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAP--PSTQLDG 324
+ P S P + P H P H+P PP P+PP P +
Sbjct: 423 PPPYYYKSPPPPSPSPPPPYYYHSPPPPKEHVHPPYYYHSPPPPSPSPPPPYYYKSPPPP 602
Query: 325 GPSRRPKFSTH------PLAPNMASLNTPPPPPPPPPPP 357
PS P + H P P ++PPPP P PPPP
Sbjct: 603 SPSPPPPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPPP 719
Score = 69.3 bits (168), Expect = 7e-12
Identities = 85/343 (24%), Positives = 109/343 (30%), Gaps = 16/343 (4%)
Frame = +3
Query: 39 APPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATKPAKPAKKVA 98
+PPP +P P PP SP P SPPPP + PPPS S P K P V
Sbjct: 60 SPPPPSPIPKPPYYYHSPPPP---SPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVP 230
Query: 99 IAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGRGNSRRVLDDSPRA 158
+ Y + + +K SP
Sbjct: 231 KPP---------------YYYHSPPPPSPSPPPPYYYK------------------SPPP 311
Query: 159 PPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPL---SKPPDE 215
P P P + Y PS S Y+ P P P PP S PP
Sbjct: 312 PSPVPKPPYYYHSPPPPS----------PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPS 461
Query: 216 IHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAATA 275
PP SP ++ +HSP S S YY + P+ +
Sbjct: 462 PSPPPPYYYHSPPPPKEHVHPPYYYHSPPPPSPSPPPPYYYK--------SPPPPSPSPP 617
Query: 276 VPFSKRTSPKSRLSASSPDIRHAMIPS--------IKHNPLPPPPAPPAPPSTQLDGGPS 327
P+ + P S P H+ P +P PP P+PP P Q PS
Sbjct: 618 PPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYQSPPPPS 797
Query: 328 RRPKFSTHPLAPNMASLNTPP-----PPPPPPPPPAARKVWSP 365
P + +P + + PP PPPP P PP SP
Sbjct: 798 PTPHPPYYYKSPPPPTSHPPPYHYVSPPPPSPSPPPPYHYTSP 926
Score = 62.8 bits (151), Expect = 6e-10
Identities = 79/332 (23%), Positives = 104/332 (30%), Gaps = 4/332 (1%)
Frame = +3
Query: 44 TPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATKPAKPAKKVAIAASA 103
+PPPP P P P++ Y PPP + +PP P + P P
Sbjct: 12 SPPPPSP----VPKPPYY--YQSPPPPSPIPKPPYYYHSPPPPSPSPPPP---------- 143
Query: 104 AVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPP 163
+ YK + + +K P +P PPP
Sbjct: 144 -------------YYYKSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPP 284
Query: 164 PSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPL---SKPPDEIHSPP 220
P + Y PS K Y P P P PP S PP PP
Sbjct: 285 P--YYYKSPPPPSPVP----------KPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPP 428
Query: 221 AASSSSPSSSEDAESRETAFHSPHGSSVS-HDDNNYYTPVSRHSSVANGSPAAATAVPFS 279
SP + +HSP H Y++P P+ + P+
Sbjct: 429 PYYYKSPPPPSPSPPPPYYYHSPPPPKEHVHPPYYYHSPPP---------PSPSPPPPYY 581
Query: 280 KRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGGPSRRPKFSTHPLAP 339
++ P S S P P H+P PP P+PP P PS P P
Sbjct: 582 YKSPPPP--SPSPPP------PYYYHSPPPPSPSPPPPYYYHSPPPPS--------PSPP 713
Query: 340 NMASLNTPPPPPPPPPPPAARKVWSPAITTMH 371
+PPPP P PPPP + P T H
Sbjct: 714 PPYYYKSPPPPSPSPPPPYYYQSPPPPSPTPH 809
Score = 51.2 bits (121), Expect = 2e-06
Identities = 47/169 (27%), Positives = 57/169 (32%), Gaps = 8/169 (4%)
Frame = +3
Query: 197 YRPSPELQPLPPLSKPPDEIHSPPAASS--------SSPSSSEDAESRETAFHSPHGSSV 248
Y+ P P+P KPP SPP S SP + + SP S
Sbjct: 6 YKSPPPPSPVP---KPPYYYQSPPPPSPIPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSP 176
Query: 249 SHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPL 308
S YY S V + P S P + P P H+P
Sbjct: 177 SPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPP 356
Query: 309 PPPPAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
PP P+PP P + PS P P +PPPP P PPPP
Sbjct: 357 PPSPSPPPPYYYKSPPPPS--------PSPPPPYYYKSPPPPSPSPPPP 479
Score = 44.7 bits (104), Expect = 2e-04
Identities = 23/54 (42%), Positives = 25/54 (45%), Gaps = 5/54 (9%)
Frame = +3
Query: 30 HQPLFPAGSAPPPSTPPPPP-----PDTPSSPDIPFFNEYSPPPPDQALTQPPP 78
H P + S PPPS PPPP P PS P + SPPPP PPP
Sbjct: 849 HPPPYHYVSPPPPSPSPPPPYHYTSPPPPSPAPAPKYIYKSPPPPVYIYASPPP 1010
Score = 42.4 bits (98), Expect = 9e-04
Identities = 31/82 (37%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Frame = +3
Query: 30 HQPLFPAGSAPPPSTPPP-----PPPDTPSSPDIPFFNEYSPPPPDQA------LTQPPP 78
H P + PP S PPP PPP +PS P P ++ SPPPP A PPP
Sbjct: 807 HPPYYYKSPPPPTSHPPPYHYVSPPPPSPSPP--PPYHYTSPPPPSPAPAPKYIYKSPPP 980
Query: 79 SASIAYPTATKPAKPAKKVAIA 100
Y A+ P K V IA
Sbjct: 981 P---VYIYASPPPPIYK*VRIA 1037
>TC224645 homologue to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (58%)
Length = 856
Score = 69.3 bits (168), Expect = 7e-12
Identities = 90/354 (25%), Positives = 116/354 (32%), Gaps = 14/354 (3%)
Frame = +2
Query: 32 PLFPAGSAPPPSTPPPP------PPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYP 85
P + S PPPS PPP PP +PS P P++ + SPPPP + PP P
Sbjct: 29 PSYYYKSPPPPSPSPPPYYYKSPPPPSPSPPS-PYYYK-SPPPPHKDPYHPPYYYKSPPP 202
Query: 86 TATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGR 145
+ P P + YK + + +K
Sbjct: 203 PSPSPPPP-----------------------YYYKSPPPPSPSPPPPYYYK--------- 286
Query: 146 GNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQP 205
SP P P PP + Y PS + Y Y+ P P
Sbjct: 287 ---------SPPPPSPSPPPPYYYKSPPPPSPSPPPP------------YYYKSPPPPSP 403
Query: 206 LPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSV 265
PP PP SPP S S P + SP S S YY
Sbjct: 404 SPP---PPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPSPPPPYYYK-------- 526
Query: 266 ANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGG 325
+ P + P+ ++ P S S P P +P PP P+PP P +
Sbjct: 527 SPPPPDPSPPPPYYYKSPPPP--SPSPPP------PYYYKSPPPPSPSPPPPYYYKSPPP 682
Query: 326 PSRRPKFSTHPLAPNMASLNTPPP-----PPPP---PPPPAARKVWSPAITTMH 371
PS P + +P S + PPP PPPP PPPP K P H
Sbjct: 683 PSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVSH 844
Score = 58.2 bits (139), Expect = 2e-08
Identities = 57/213 (26%), Positives = 72/213 (33%), Gaps = 10/213 (4%)
Frame = +2
Query: 155 SPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASN-------YRYRPSPELQPLP 207
SP P P PPS + Y P + S S Y+ P P P P
Sbjct: 92 SPPPPSPSPPSPYYYKSPPPPHKDPYHPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPP 271
Query: 208 PL---SKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSS 264
P S PP PP SP + + SP S S YY
Sbjct: 272 PYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYK------- 430
Query: 265 VANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDG 324
+ P+ + P+ ++ P S S P P +P PP P+PP P +
Sbjct: 431 -SPPPPSPSPPPPYYYKSPPPP--SPSPPP------PYYYKSPPPPDPSPPPPYYYKSPP 583
Query: 325 GPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
PS P P +PPPP P PPPP
Sbjct: 584 PPS--------PSPPPPYYYKSPPPPSPSPPPP 658
Score = 49.3 bits (116), Expect = 7e-06
Identities = 75/340 (22%), Positives = 98/340 (28%)
Frame = +2
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPP 77
P + +P P P+ S PPP PPP +PS P P + SPPPP + PP
Sbjct: 200 PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPP--PPYYYKSPPPPSPS---PP 364
Query: 78 PSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKL 137
P P P+ P + YK + + +K
Sbjct: 365 PPYYYKSPPPPSPSPPPP---------------------YYYKSPPPPSPSPPPPYYYK- 478
Query: 138 VVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRY 197
P +P PPPP Y Y
Sbjct: 479 ---------------SPPPPSPSPPPP------------------------------YYY 523
Query: 198 RPSPELQPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYT 257
+ P P PP PP SPP S S P + SP S S YY
Sbjct: 524 KSPPPPDPSPP---PPYYYKSPPPPSPSPPP--------PYYYKSPPPPSPSPPPPYYYK 670
Query: 258 PVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAP 317
+ P+ + P+ ++ P PP P+PP P
Sbjct: 671 --------SPPPPSPSPPPPYYYKSPP------------------------PPSPSPPPP 754
Query: 318 PSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
+ PS P P +PPPP P PP
Sbjct: 755 YYYKSPPPPS--------PSPPPPYYYKSPPPPSPVSHPP 850
Score = 48.5 bits (114), Expect = 1e-05
Identities = 45/166 (27%), Positives = 59/166 (35%), Gaps = 3/166 (1%)
Frame = +2
Query: 195 YRYRPSPEL---QPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHD 251
Y+ P P P PP PP + P S SP S +S P+ H
Sbjct: 11 YKSPPPPSYYYKSPPPPSPSPPPYYYKSPPPPSPSPPSPYYYKSPPPPHKDPY-----HP 175
Query: 252 DNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPP 311
Y +P P+ + P+ ++ P S S P P +P PP
Sbjct: 176 PYYYKSPPP---------PSPSPPPPYYYKSPPPP--SPSPPP------PYYYKSPPPPS 304
Query: 312 PAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
P+PP P + PS P P +PPPP P PPPP
Sbjct: 305 PSPPPPYYYKSPPPPS--------PSPPPPYYYKSPPPPSPSPPPP 418
Score = 48.1 bits (113), Expect = 2e-05
Identities = 54/215 (25%), Positives = 68/215 (31%), Gaps = 5/215 (2%)
Frame = +2
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFN-----EYSPPPPDQA 72
P + +P P P+ S PPP PPP +PS P ++ SPPPP
Sbjct: 248 PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYY 427
Query: 73 LTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSS 132
+ PPPS S P K P S + YK + +
Sbjct: 428 KSPPPPSPSPPPPYYYKSPPPPSP---------------SPPPPYYYKSPPPPDPSPPPP 562
Query: 133 ENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLA 192
+K SP P P PP + Y PS +
Sbjct: 563 YYYK------------------SPPPPSPSPPPPYYYKSPPPPSPSP------------P 652
Query: 193 SNYRYRPSPELQPLPPLSKPPDEIHSPPAASSSSP 227
Y Y+ P P PP PP SPP S S P
Sbjct: 653 PPYYYKSPPPPSPSPP---PPYYYKSPPPPSPSPP 748
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Frame = +2
Query: 278 FSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGGPSRRPKFSTH-- 335
+ K P S S P + P +P PP P+PP+P + P + P +
Sbjct: 8 YYKSPPPPSYYYKSPPPPSPSPPPYYYKSPPPPSPSPPSPYYYKSPPPPHKDPYHPPYYY 187
Query: 336 -------PLAPNMASLNTPPPPPPPPPPP 357
P P +PPPP P PPPP
Sbjct: 188 KSPPPPSPSPPPPYYYKSPPPPSPSPPPP 274
Score = 41.6 bits (96), Expect = 0.002
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +2
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSP-----PPPDQA 72
P + +P P P+ S PPP PPP +PS P P++ + P PPP
Sbjct: 632 PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPP-PYYYKSPPPPSPSPPPPYY 808
Query: 73 LTQPPPSASIAYP 85
PPP + +++P
Sbjct: 809 YKSPPPPSPVSHP 847
>BF008961 weakly similar to GP|9757868|dbj| formin-like protein {Arabidopsis
thaliana}, partial (3%)
Length = 421
Score = 68.6 bits (166), Expect = 1e-11
Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 20/86 (23%)
Frame = +3
Query: 6 YFLILLSLSLF-------------TPLNSTPNARRILHQPLFPAGSAPPP----STPPPP 48
+++I+ +LSLF T N + N RRILHQPLFPA SAPPP S PPPP
Sbjct: 171 FYIIVFTLSLFLSFQVNTVKGVNNTSANESGN-RRILHQPLFPASSAPPPAGTASPPPPP 347
Query: 49 PPDTPSSPD---IPFFNEYSPPPPDQ 71
+TP SPD IPFF+EY P DQ
Sbjct: 348 AVETPPSPDGGNIPFFHEY---PADQ 416
>TC230101 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (47%)
Length = 944
Score = 66.2 bits (160), Expect = 6e-11
Identities = 93/385 (24%), Positives = 120/385 (31%), Gaps = 29/385 (7%)
Frame = +2
Query: 2 KLKPYFLILLSLSLFT-----------PLNSTPNARRILHQPLFP-AGSAPPPSTPPPPP 49
+L+P + L+++L + P S P + P P +PPP +P PPP
Sbjct: 101 RLRPQMALALAIALISITLVSVNADGYPYYSPPPPYQYTSPPPPPYLYKSPPPPSPSPPP 280
Query: 50 PDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVA 109
P SP P SPPPP + PPPS S P K P +K
Sbjct: 281 PYYYKSPPPP---SPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPEK------------- 412
Query: 110 VLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLY 169
A + YK P +P PPPP
Sbjct: 413 -SPAPTPYYYK--------------------------------SPPPPSPSPPPP----- 478
Query: 170 IGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPDEIHSPPAASSSSPSS 229
Y Y+ P P PP PP +PP S+S P +
Sbjct: 479 -------------------------YYYKSPPPPSPSPP---PPYYYKAPPPPSASPPPA 574
Query: 230 SEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLS 289
+ SP S S YY TA P S + P
Sbjct: 575 --------YYYKSPPPPSPSPTPPYYY----------------KTAPPPSP-SPPPPYYY 679
Query: 290 ASSPDIRHAMIPSIKHNPLPPPPAP----------PAPPSTQLDGGPSRRPKFSTHPLAP 339
S P P+ +N PPPP+P P+P P P + P
Sbjct: 680 KSPPPPEKPPAPTPYYNKSPPPPSPTPYYYKSPPTPSPTPYYYKSAPPPPPYYYKSAPTP 859
Query: 340 NMAS--LNTPPPPPP-----PPPPP 357
+ A +PPPPPP PPPPP
Sbjct: 860 SAAPYYYESPPPPPPYYYKSPPPPP 934
Score = 48.9 bits (115), Expect = 9e-06
Identities = 53/224 (23%), Positives = 69/224 (30%), Gaps = 8/224 (3%)
Frame = +2
Query: 159 PPP-----PPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPL---S 210
PPP PPP +LY PS S Y+ P P P PP S
Sbjct: 197 PPPYQYTSPPPPPYLYKSPPPPSP----------SPPPPYYYKSPPPPSPSPPPPYYYKS 346
Query: 211 KPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSP 270
PP PP SP E + + ++ YY S + P
Sbjct: 347 PPPPSPSPPPPYYYKSPPPPEKSPAPTPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPP 526
Query: 271 AAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGGPSRRP 330
A P + P + S P + P + PPP P PP P +P
Sbjct: 527 YYYKAPPPPSASPPPAYYYKSPPPPSPSPTPPYYYKTAPPPSPSPPPPYYYKSPPPPEKP 706
Query: 331 KFSTHPLAPNMASLNTPPPPPPPPPPPAARKVWSPAITTMHSSS 374
P PPPP P P + +P+ T + S
Sbjct: 707 --------PAPTPYYNKSPPPPSPTPYYYKSPPTPSPTPYYYKS 814
Score = 47.0 bits (110), Expect = 4e-05
Identities = 34/111 (30%), Positives = 42/111 (37%)
Frame = +2
Query: 247 SVSHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHN 306
SV+ D YY+P + + P P SP SP P +
Sbjct: 161 SVNADGYPYYSPPPPYQYTSPPPPPYLYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYY 340
Query: 307 PLPPPPAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
PPPP+P PP P P+ S AP +PPPP P PPPP
Sbjct: 341 KSPPPPSPSPPPPYYYKSPPP--PEKSP---APTPYYYKSPPPPSPSPPPP 478
Score = 45.1 bits (105), Expect = 1e-04
Identities = 48/177 (27%), Positives = 62/177 (34%), Gaps = 8/177 (4%)
Frame = +2
Query: 197 YRPSPELQPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYY 256
Y P P Q P PP SPP S S P + SP S S YY
Sbjct: 188 YSPPPPYQYTSP-PPPPYLYKSPPPPSPSPPPPYY--------YKSPPPPSPSPPPPYYY 340
Query: 257 TPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPA 316
+ P+ + P+ ++ P P+ A P +P PP P+PP
Sbjct: 341 K--------SPPPPSPSPPPPYYYKSPPP-------PEKSPAPTPYYYKSPPPPSPSPPP 475
Query: 317 PPSTQLDGGPSRRPKFSTHPLAPNMASLN--------TPPPPPPPPPPPAARKVWSP 365
P + PS P + AP S + +PPPP P P PP K P
Sbjct: 476 PYYYKSPPPPSPSPPPPYYYKAPPPPSASPPPAYYYKSPPPPSPSPTPPYYYKTAPP 646
Score = 32.7 bits (73), Expect = 0.70
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Frame = +2
Query: 35 PAGSAPPP----STPPPPP---PDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAY 84
P +P P S PPPPP P+ P++ E SPPPP + PP Y
Sbjct: 776 PPTPSPTPYYYKSAPPPPPYYYKSAPTPSAAPYYYE-SPPPPPPYYYKSPPPPPYYY 943
>TC224765 similar to UP|Q09082 (Q09082) Extensin (Class I), partial (46%)
Length = 708
Score = 64.3 bits (155), Expect = 2e-10
Identities = 54/201 (26%), Positives = 71/201 (34%)
Frame = +3
Query: 157 RAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPDEI 216
++PPPP P+ + Y PS + S + + Y Y+ P P PP +
Sbjct: 6 KSPPPPSPTPYYYHSPPPPSPSPPSPYYYKSPPPPSPVYIYKSPPPPSPTYVYKSPPPPV 185
Query: 217 HSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAATAV 276
SPP S P S + + SP S YY SP + V
Sbjct: 186 KSPPYYYQSPPPPSPKPKP-PYYYKSPPPPSPKPKPPYYYQ-----------SPPPPSPV 329
Query: 277 PFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGGPSRRPKFSTHP 336
P P + P P H+P PP P+PP P + PS P
Sbjct: 330 P-----KPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPS--------P 470
Query: 337 LAPNMASLNTPPPPPPPPPPP 357
P +PPPP P PPPP
Sbjct: 471 SPPPPYYYKSPPPPSPSPPPP 533
Score = 47.8 bits (112), Expect = 2e-05
Identities = 49/197 (24%), Positives = 65/197 (32%), Gaps = 8/197 (4%)
Frame = +3
Query: 39 APPPSTPPP-----PPPDTPSSPDIPFFNEYSPPPPDQAL---TQPPPSASIAYPTATKP 90
+PPP +P P PPP +PS P P++ + SPPPP + PPPS + Y + P
Sbjct: 9 SPPPPSPTPYYYHSPPPPSPSPPS-PYYYK-SPPPPSPVYIYKSPPPPSPTYVYKSPPPP 182
Query: 91 AKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGRGNSRR 150
K + Y+ + +K
Sbjct: 183 VKSPP---------------------YYYQSPPPPSPKPKPPYYYK-------------- 257
Query: 151 VLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLS 210
SP P P P + Y PS Y Y+ P P+P
Sbjct: 258 ----SPPPPSPKPKPPYYYQSPPPPSPVP------------KPPYYYKSPPPPSPVP--- 380
Query: 211 KPPDEIHSPPAASSSSP 227
KPP HSPP S S P
Sbjct: 381 KPPYYYHSPPPPSPSPP 431
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = +3
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPP 77
P + P H P P+ S PPP PPP +PS P P + SPPPP + PP
Sbjct: 363 PPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPP--PPYYYKSPPPPSPS---PP 527
Query: 78 P 78
P
Sbjct: 528 P 530
Score = 40.0 bits (92), Expect = 0.004
Identities = 55/232 (23%), Positives = 66/232 (27%), Gaps = 26/232 (11%)
Frame = +3
Query: 38 SAPPPS-------TPPPPPPDTPSS-------PDIPFFNEYSPPPPDQAL---TQPPPSA 80
S PPPS +PPPP P PS P P + SPPPP + PPP
Sbjct: 9 SPPPPSPTPYYYHSPPPPSPSPPSPYYYKSPPPPSPVYIYKSPPPPSPTYVYKSPPPPVK 188
Query: 81 SIAY------PTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSEN 134
S Y P + KP P + YK +
Sbjct: 189 SPPYYYQSPPPPSPKPKPP-----------------------YYYKSPPPPSPKPKPPYY 299
Query: 135 HKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASN 194
++ SP P P P + Y PS K
Sbjct: 300 YQ------------------SPPPPSPVPKPPYYYKSPPPPSPV----------PKPPYY 395
Query: 195 YRYRPSPELQPLPPL---SKPPDEIHSPPAASSSSPSSSEDAESRETAFHSP 243
Y P P P PP S PP PP SP + +HSP
Sbjct: 396 YHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSP 551
Score = 36.6 bits (83), Expect = 0.049
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = +3
Query: 31 QPLFPAGSAPPPSTPPPPP-----PDTPS-SPDIPFFNEYSPPPPDQALTQPPPSASIAY 84
+P + S PPPS P PP P PS SP P++ Y PPP PPP
Sbjct: 333 KPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYY--YKSPPPPSP--SPPPPYYYKS 500
Query: 85 PTATKPAKP 93
P P+ P
Sbjct: 501 PPPPSPSPP 527
Score = 36.2 bits (82), Expect = 0.064
Identities = 21/64 (32%), Positives = 28/64 (42%), Gaps = 10/64 (15%)
Frame = +3
Query: 32 PLFPAGSAPPPSTPPP-----PPPDTPSSPDIPFFNEYSPPP-----PDQALTQPPPSAS 81
P + S PPP PP PPP +P P P++ + PPP P PPP +
Sbjct: 150 PTYVYKSPPPPVKSPPYYYQSPPPPSP-KPKPPYYYKSPPPPSPKPKPPYYYQSPPPPSP 326
Query: 82 IAYP 85
+ P
Sbjct: 327 VPKP 338
Score = 34.7 bits (78), Expect = 0.19
Identities = 46/195 (23%), Positives = 63/195 (31%), Gaps = 6/195 (3%)
Frame = +3
Query: 32 PLFPAGSAPPPS------TPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYP 85
P++ S PPPS +PPPP SP P++ Y PPP +PP P
Sbjct: 114 PVYIYKSPPPPSPTYVYKSPPPPV----KSP--PYY--YQSPPPPSPKPKPPYYYKSPPP 269
Query: 86 TATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGR 145
+ KP P + + V Y +++ + +
Sbjct: 270 PSPKPKPPYYYQSPPPPSPVPKPP---------YYYKSPPPPSPVPKPPYYY-------- 398
Query: 146 GNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQP 205
SP P P PP + Y PS + Y Y+ P P
Sbjct: 399 --------HSPPPPSPSPPPPYYYKSPPPPSPSP------------PPPYYYKSPPPPSP 518
Query: 206 LPPLSKPPDEIHSPP 220
PP PP HSPP
Sbjct: 519 SPP---PPYYYHSPP 554
Score = 32.3 bits (72), Expect = 0.92
Identities = 21/76 (27%), Positives = 29/76 (37%)
Frame = +3
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPP 77
P + P P P+ PP PPP +P P P++ Y PPP + +PP
Sbjct: 219 PPSPKPKPPYYYKSPPPPSPKPKPPYYYQSPPPPSP-VPKPPYY--YKSPPPPSPVPKPP 389
Query: 78 PSASIAYPTATKPAKP 93
P + P P
Sbjct: 390 YYYHSPPPPSPSPPPP 437
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (53%)
Frame = +3
Query: 39 APPPSTPPPPPPDTPSSPDIPFFNEYSPPPP 69
+PPP +P PPPP + +SPPPP
Sbjct: 498 SPPPPSPSPPPP----------YYYHSPPPP 560
>TC204046 UP|Q39835 (Q39835) Extensin, complete
Length = 1627
Score = 62.4 bits (150), Expect = 8e-10
Identities = 60/217 (27%), Positives = 79/217 (35%), Gaps = 9/217 (4%)
Frame = +1
Query: 158 APPPP---PPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPL---SK 211
+PPPP PP + Y P +S Y P P+ P PP S
Sbjct: 148 SPPPPKHSPPPPYYYHSPPPPK----------HSPPPPYYYHSPPPPKHSPPPPYYYHSP 297
Query: 212 PPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYY--TPVSRHSSVANGS 269
PP + PP SP + + +HSP S YY P +HS
Sbjct: 298 PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPP--- 468
Query: 270 PAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIK-HNPLPPPPAPPAPPSTQLDGGPSR 328
P + P K + P S P +H+ P H+P PP +PP P + P +
Sbjct: 469 PYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYKSPPPPPK 648
Query: 329 RPKFSTHPLAPNMASLNTPPPPPPPPPPPAARKVWSP 365
+P P P + PPP P PPP K SP
Sbjct: 649 KPYKYPSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSP 759
Score = 60.1 bits (144), Expect = 4e-09
Identities = 88/365 (24%), Positives = 109/365 (29%), Gaps = 17/365 (4%)
Frame = +1
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPP 77
P +P H P P S PPP PPP S P P + +SPPPP + PP
Sbjct: 109 PPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPP--PPYYYHSPPPPKHS---PP 273
Query: 78 PSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKL 137
P P K + P ++ + +S H
Sbjct: 274 PPYYYHSPPPPKHSPPP--------------------PYYYHSPPPPKHSPPPPYYYH-- 387
Query: 138 VVDGGGGRGNSRRVLDDSPRAPPPP---PPSSFLYIGTVEPSRTSVSDAQNLNSAKLASN 194
+PPPP PP + Y P +
Sbjct: 388 --------------------SPPPPKHSPPPPYYYHSPPPPKHSP------------PPP 471
Query: 195 YRYRPSPELQPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNN 254
Y Y P + PP PP HSPP S P +HSP S
Sbjct: 472 YYYHSPPPPKHSPP---PPYYYHSPPPPKHSPPP--------PYYYHSPPPPKHSPPPPY 618
Query: 255 YYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPP-- 312
YY SP P+ + P SP P K+ PPPP
Sbjct: 619 YYK-----------SPPPPPKKPYKYPSPPPPVYKYKSPP------PPYKYPSPPPPPYK 747
Query: 313 -APPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPP-----PPPP------PPPAAR 360
P PP + P K+ + P P + PPPP PPPP PPP
Sbjct: 748 YPSPPPPVYKYKSPPPPVYKYKSPP--PPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVY 921
Query: 361 KVWSP 365
K SP
Sbjct: 922 KYKSP 936
Score = 57.8 bits (138), Expect = 2e-08
Identities = 87/354 (24%), Positives = 110/354 (30%), Gaps = 14/354 (3%)
Frame = +1
Query: 18 PLNSTPNARRILHQPLFPAGSAPPP----STPPP----PPPDTPSSPDIPFFNEYSPPPP 69
P +P H P P S PPP S PPP PPP SP P ++SPPPP
Sbjct: 397 PPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPP---KHSPPPP 567
Query: 70 DQALTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQ 129
+ PPP S P K P K + V YK+++ +
Sbjct: 568 YYYHSPPPPKHSPPPPYYYKSPPPPPKKPYKYPSPPPPV----------YKYKSPPPPYK 717
Query: 130 TSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSA 189
S P P PPP + Y P
Sbjct: 718 YPSP-------------------PPPPYKYPSPPPPVYKYKSPPPP-------------- 798
Query: 190 KLASNYRYRPSPELQPLPPLSKPPDEIHSPPA---ASSSSPSSSEDAESRETAFHSPHGS 246
Y+ P P P PP PP + SPP S P +S + P
Sbjct: 799 --VYKYKSPPPPYKYPSPP--PPPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYPSPP 966
Query: 247 SVSHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHN 306
+ + PV ++ S P K SP SP P
Sbjct: 967 PPPYKYPSPPPPVYKYKS---------PPPPVYKYKSPPPPYKYPSPP------PPPYKY 1101
Query: 307 PLPPPPA---PPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
P PPPP PP + P K+ + P P + +PPPP PPPP
Sbjct: 1102PSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPP--PPVYKYKSPPPPVHSPPPP 1257
Score = 55.1 bits (131), Expect = 1e-07
Identities = 87/363 (23%), Positives = 116/363 (30%), Gaps = 23/363 (6%)
Frame = +1
Query: 18 PLNSTPNARRILHQPLFPAGSAPPP----STPPP----PPPDTPSSPDIPFFNEYSPPPP 69
P +P H P P S PPP S PPP PPP SP P ++SPPPP
Sbjct: 253 PPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPP---KHSPPPP 423
Query: 70 DQALTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQ 129
+ PPP S P P K ++ + +S
Sbjct: 424 YYYHSPPPPKHSPPPPYYYHSPPPPKH--------------SPPPPYYYHSPPPPKHSPP 561
Query: 130 TSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSA 189
H SP P PP + Y P + + +
Sbjct: 562 PPYYYH-------------------SPPPPKHSPPPPYYYKSPPPPPK---KPYKYPSPP 675
Query: 190 KLASNYRYRPSPELQPLPPLSKPPDEIHSPPA---ASSSSPSSSEDAESRETAFHSPHGS 246
Y+ P P P PP PP + SPP S P +S + P
Sbjct: 676 PPVYKYKSPPPPYKYPSPP--PPPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYPSPP 849
Query: 247 SVSHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKS---RLSASSPDI---RHAMI 300
+ + PV ++ S + P K SP + + P + +
Sbjct: 850 PPPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPP 1029
Query: 301 PSIKHNPLPPP---PAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPP---PPP 354
P K+ PPP P+PP PP PS P + P +PPPPP P P
Sbjct: 1030PVYKYKSPPPPYKYPSPPPPPYKY----PSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSP 1197
Query: 355 PPP 357
PPP
Sbjct: 1198PPP 1206
Score = 50.8 bits (120), Expect = 2e-06
Identities = 50/174 (28%), Positives = 63/174 (35%), Gaps = 2/174 (1%)
Frame = +1
Query: 186 LNSAKLASNYRYRPSPELQPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHG 245
L S LA NY Y S PP + PP SP + + +HSP
Sbjct: 61 LPSQTLADNYIYS-----------SPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPP 207
Query: 246 SSVSHDDNNYY--TPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSI 303
S YY P +HS P + P K + P S P +H+ P
Sbjct: 208 PKHSPPPPYYYHSPPPPKHSP---PPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPY 378
Query: 304 KHNPLPPPPAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
++ PPP P PP P PK S P ++PPPP PPPP
Sbjct: 379 YYHSPPPPKHSPPPPYYYHSPPP---PKHS----PPPPYYYHSPPPPKHSPPPP 519
Score = 46.6 bits (109), Expect = 5e-05
Identities = 56/223 (25%), Positives = 76/223 (33%), Gaps = 14/223 (6%)
Frame = +1
Query: 157 RAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPDEI 216
++PPPPP + Y P Y+ P P P PP PP +
Sbjct: 625 KSPPPPPKKPYKYPSPPPP----------------VYKYKSPPPPYKYPSPP--PPPYKY 750
Query: 217 HSPPAAS---SSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAA 273
SPP S P +S + P + + PV ++ S
Sbjct: 751 PSPPPPVYKYKSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYK 930
Query: 274 TAVPFSKRTSPKS---RLSASSPDI---RHAMIPSIKHNPLPPP---PAPPAPPSTQLDG 324
+ P K SP + + P + + P K+ PPP P+PP PP
Sbjct: 931 SPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYPSPPPPPYKY--- 1101
Query: 325 GPSRRPKFSTHPLAPNMASLNTPPPPPP--PPPPPAARKVWSP 365
PS P + P +PPPPP P PPP K SP
Sbjct: 1102-PSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSP 1227
Score = 43.5 bits (101), Expect = 4e-04
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 32 PLFPAGSAPPPST--PPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATK 89
P++ S PPP PPPPP SP P + SPPPP PPP YP+
Sbjct: 913 PVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSPPP--PYKYPSPPP 1086
Query: 90 P 90
P
Sbjct: 1087P 1089
Score = 43.5 bits (101), Expect = 4e-04
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 32 PLFPAGSAPPPST--PPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATK 89
P++ S PPP PPPPP SP P + SPPPP PPP YP+
Sbjct: 796 PVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSPPP--PYKYPSPPP 969
Query: 90 P 90
P
Sbjct: 970 P 972
Score = 43.5 bits (101), Expect = 4e-04
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 32 PLFPAGSAPPPST--PPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATK 89
P++ S PPP PPPPP SP P + SPPPP PPP YP+
Sbjct: 679 PVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSPPP--PYKYPSPPP 852
Query: 90 P 90
P
Sbjct: 853 P 855
Score = 40.0 bits (92), Expect = 0.004
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 32 PLFPAGSAPPPST--PPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYP 85
P++ S PPP PPPPP SP P + SPPPP + PPP A P
Sbjct: 1117 PVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYKYKSPPPP--VHSPPPPHYIYASP 1278
Score = 37.7 bits (86), Expect = 0.022
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 18/108 (16%)
Frame = +1
Query: 268 GSPAAAT----AVPFSKRTSPKSRLS-----ASSPDIRHAMIPSIK-HNPLPPPPAPPAP 317
GSP A+ A+ T P L+ +S P +H+ P H+P PP +PP P
Sbjct: 4 GSPMASLTLTIALTIISLTLPSQTLADNYIYSSPPPPKHSPPPPYYYHSPPPPKHSPPPP 183
Query: 318 PSTQLDGGPSRRPKFSTHPLAPNMASLNTPPP-----PPPP---PPPP 357
P P + +P + PPP PPPP PPPP
Sbjct: 184 YYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPP 327
Score = 36.2 bits (82), Expect = 0.064
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 34 FPAGSAPPPSTPPPPPPDTP-SSPDIPFFNEYSPPPPDQALTQPPP 78
+P+ PP P PPPP SP P +SPPPP PPP
Sbjct: 1156 YPSPPPPPYKYPSPPPPVYKYKSPPPPV---HSPPPPHYIYASPPP 1284
Score = 32.3 bits (72), Expect = 0.92
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 32 PLFPAGSAPPPS----TPPPP------PPDTPSSPDIPFFNEYSPPPP 69
P + S PPP +PPPP PP SP P + SPPPP
Sbjct: 1144 PPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVHSPPPPHYIYASPPPP 1287
>TC206712 similar to GB|AAT41855.1|48310625|BT014872 At2g19340 {Arabidopsis
thaliana;} , partial (74%)
Length = 741
Score = 62.4 bits (150), Expect = 8e-10
Identities = 53/169 (31%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Frame = +2
Query: 156 PRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPDE 215
PR P PPPP+ T P+ S+ + + S+ AS+ P PP PP
Sbjct: 86 PRCPLPPPPAE----ATPPPAHPSIRSSTSSASSPSASS---APLASASSFPPSPSPP-- 238
Query: 216 IHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAATA 275
+P + SSSSP+S T+ SP S+ TP S+ ++ PAA+TA
Sbjct: 239 -RTPSSPSSSSPTSWSSPALFTTSSSSPPASAPLR------TPTPAPSAPSSSCPAASTA 397
Query: 276 VPFSKRTSPKS--------RLSASSPDIRHAMIPSIKHNPLPPPPAPPA 316
S+ + P S S++SP I A PS P PPP PP+
Sbjct: 398 STSSRASPPDSCSSSVASASFSSTSPSIATARNPS--RFPTPPPAFPPS 538
Score = 46.6 bits (109), Expect = 5e-05
Identities = 43/129 (33%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +2
Query: 270 PAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGGPSRR 329
PA AT P + + S SASSP A + S + PP P+PP PS+ PS
Sbjct: 110 PAEATPPP-AHPSIRSSTSSASSPSASSAPLASA--SSFPPSPSPPRTPSS-----PSSS 265
Query: 330 PKFSTHPLAPNMASLNTPPPPPP---PPPPPAARKVWSPAITTMHSSSVSKQQQSSSSIE 386
S A S ++PP P P P P+A PA +T +SS + S SS
Sbjct: 266 SPTSWSSPALFTTSSSSPPASAPLRTPTPAPSAPSSSCPAASTASTSSRASPPDSCSSSV 445
Query: 387 GDASSNGVS 395
AS + S
Sbjct: 446 ASASFSSTS 472
Score = 46.2 bits (108), Expect = 6e-05
Identities = 30/74 (40%), Positives = 38/74 (50%), Gaps = 6/74 (8%)
Frame = +2
Query: 307 PLPPPPA----PPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPPAARKV 362
PLPPPPA PPA PS + + P S+ PLA + +P PP P P ++
Sbjct: 95 PLPPPPAEATPPPAHPSIRSSTSSASSPSASSAPLASASSFPPSPSPPRTPSSPSSSSPT 274
Query: 363 -W-SPAITTMHSSS 374
W SPA+ T SSS
Sbjct: 275 SWSSPALFTTSSSS 316
Score = 38.1 bits (87), Expect = 0.017
Identities = 28/94 (29%), Positives = 43/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 17 TPLNSTPNARRILHQPLFPAGSAPPPST-----PPPPPPDTPSSPDIPFFNEYSPPPP-D 70
TP + P+ R P+ S+ P ++ P P PP TPSSP +S P
Sbjct: 122 TPPPAHPSIRSSTSSASSPSASSAPLASASSFPPSPSPPRTPSSPSSSSPTSWSSPALFT 301
Query: 71 QALTQPPPSASIAYPTATKPAKPAKKVAIAASAA 104
+ + PP SA + PT P+ P+ A++A+
Sbjct: 302 TSSSSPPASAPLRTPTPA-PSAPSSSCPAASTAS 400
Score = 34.7 bits (78), Expect = 0.19
Identities = 25/73 (34%), Positives = 33/73 (44%), Gaps = 2/73 (2%)
Frame = +2
Query: 34 FPAGSAPP--PSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATKPA 91
FP +PP PS+P P + SSP + F S PP L P P+ P+A +
Sbjct: 215 FPPSPSPPRTPSSPSSSSPTSWSSPAL-FTTSSSSPPASAPLRTPTPA-----PSAPSSS 376
Query: 92 KPAKKVAIAASAA 104
PA A +S A
Sbjct: 377 CPAASTASTSSRA 415
Score = 32.3 bits (72), Expect = 0.92
Identities = 54/221 (24%), Positives = 78/221 (34%)
Frame = +2
Query: 9 ILLSLSLFTPLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPP 68
+L SL L P + RI PL P P +TPPP P SS S P
Sbjct: 29 LLFSLPLRNPTRKC-DPNRIPRCPLPPP---PAEATPPPAHPSIRSSTSSASSPSASSAP 196
Query: 69 PDQALTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSN 128
A + PP + P++ + P +S A+ T + S A + + S
Sbjct: 197 LASASSFPPSPSPPRTPSSPSSSSPTS----WSSPALFTTSSSSPPASAPLRTPTPAPSA 364
Query: 129 QTSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNS 188
+SS + S RA PP SS + + + S++ A+N
Sbjct: 365 PSSS-------------CPAASTASTSSRASPPDSCSSSVASASFSSTSPSIATARN--- 496
Query: 189 AKLASNYRYRPSPELQPLPPLSKPPDEIHSPPAASSSSPSS 229
P P PP + PP + A SSS+ S
Sbjct: 497 ------------PSRFPTPPPAFPPSC*LTS*ACSSSASRS 583
Score = 28.5 bits (62), Expect(2) = 0.93
Identities = 20/58 (34%), Positives = 25/58 (42%), Gaps = 1/58 (1%)
Frame = +2
Query: 347 PPPPPPPPPPPAARKVWSPAITTMHSSSVSKQQQSSSSIEGDAS-SNGVSSVSVSKPS 403
PPPP PPPA + S + S+ S S+SS S SS S S P+
Sbjct: 101 PPPPAEATPPPAHPSIRSSTSSASSPSASSAPLASASSFPPSPSPPRTPSSPSSSSPT 274
Score = 22.3 bits (46), Expect(2) = 0.93
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 339 PNMASLNTPPPPPP 352
P M S + PP PPP
Sbjct: 61 PKMRSKSDPPVPPP 102
>BF424573
Length = 420
Score = 59.3 bits (142), Expect = 7e-09
Identities = 26/78 (33%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +1
Query: 747 GSFFNATEIFLKDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEE-VHPFRIFMIVRD 805
G F N + FL++ E ++ V+K+++ R + LVK+ EY+ +K+ V+PF++F+IV+
Sbjct: 181 GEFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNEYYLAGASKDNMVNPFQLFVIVKS 360
Query: 806 FLNILDQVCKEVGRMQDR 823
F++++DQ C E+ + ++
Sbjct: 361 FVDMVDQACIELKKKVEK 414
>TC215424 similar to UP|Q9MA04 (Q9MA04) F20B17.16, partial (26%)
Length = 1030
Score = 58.2 bits (139), Expect = 2e-08
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Frame = +3
Query: 301 PSIKHNPLPPPPAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPP---PPPPP 357
P H P PPPP PP PP P P +P + N S PPPPPP PPPPP
Sbjct: 114 PHHPHYPYPPPPPPP-PPEASYQPPPPPPPAPMYYP-SNNQYSNQPPPPPPPLSPPPPPP 287
Query: 358 AARKVWSPAITTMHSSSVSKQQQSSSSIEGDASSNGVSSVSVSKPSEEGESMMEGGKP 415
P +T + K+ +S E + S++G++ + M G P
Sbjct: 288 PVSPPPPPPVTQNNEERHFKEPSTSGRREYEHSNHGIAHKQHKQQPPVPVKKMNNGPP 461
Score = 49.3 bits (116), Expect = 7e-06
Identities = 25/62 (40%), Positives = 31/62 (49%), Gaps = 6/62 (9%)
Frame = +3
Query: 30 HQPLFPAGSAPPPSTP----PPPPPDTPSSPDIPFFNEYS--PPPPDQALTQPPPSASIA 83
H P +P PPP P PPPP P+ P N+YS PPPP L+ PPP ++
Sbjct: 117 HHPHYPYPPPPPPPPPEASYQPPPPPPPAPMYYPSNNQYSNQPPPPPPPLSPPPPPPPVS 296
Query: 84 YP 85
P
Sbjct: 297 PP 302
Score = 36.6 bits (83), Expect = 0.049
Identities = 33/121 (27%), Positives = 43/121 (35%), Gaps = 3/121 (2%)
Frame = +3
Query: 156 PRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPDE 215
P PPPPPP + + +P S SN P P L P PP PP
Sbjct: 138 PPPPPPPPPEA-----SYQPPPPPPPAPMYYPSNNQYSNQPPPPPPPLSPPPP--PPPVS 296
Query: 216 IHSPPAASSSSPS---SSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAA 272
PP + ++ R HS HG ++H + PV + NG P
Sbjct: 297 PPPPPPVTQNNEERHFKEPSTSGRREYEHSNHG--IAHKQHKQQPPVP-VKKMNNGPPGR 467
Query: 273 A 273
A
Sbjct: 468 A 470
Score = 33.9 bits (76), Expect = 0.32
Identities = 22/71 (30%), Positives = 28/71 (38%), Gaps = 2/71 (2%)
Frame = +3
Query: 18 PLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQAL--TQ 75
P NS + + H P P P PPPPP PPPP+ +
Sbjct: 54 PPNSNYHQNQQHHVPYAPPNPHHPHYPYPPPPP---------------PPPPEASYQPPP 188
Query: 76 PPPSASIAYPT 86
PPP A + YP+
Sbjct: 189 PPPPAPMYYPS 221
Score = 33.5 bits (75), Expect = 0.41
Identities = 20/47 (42%), Positives = 24/47 (50%)
Frame = +3
Query: 23 PNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPP 69
P+ + +QP P PPP +PPPPPP P SP PPPP
Sbjct: 216 PSNNQYSNQPPPP----PPPLSPPPPPP--PVSP---------PPPP 311
Score = 33.5 bits (75), Expect = 0.41
Identities = 16/46 (34%), Positives = 21/46 (44%)
Frame = +3
Query: 314 PPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPPAA 359
P PP++ ++ PN + P PPPPPPPPP A
Sbjct: 45 PQIPPNSNYHQNQQHHVPYAP----PNPHHPHYPYPPPPPPPPPEA 170
Score = 33.1 bits (74), Expect = 0.54
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 34 FPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPP 69
+P+ + PPPPPP +P P P SPPPP
Sbjct: 213 YPSNNQYSNQPPPPPPPLSPPPPPPP----VSPPPP 308
Score = 31.6 bits (70), Expect = 1.6
Identities = 15/47 (31%), Positives = 21/47 (43%)
Frame = +3
Query: 32 PLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPP 78
P++ + + PPPPPP SPPPP ++ PPP
Sbjct: 204 PMYYPSNNQYSNQPPPPPP------------PLSPPPPPPPVSPPPP 308
Score = 30.8 bits (68), Expect = 2.7
Identities = 14/29 (48%), Positives = 18/29 (61%)
Frame = +3
Query: 32 PLFPAGSAPPPSTPPPPPPDTPSSPDIPF 60
PL P PPP +PPPPPP T ++ + F
Sbjct: 261 PLSPP-PPPPPVSPPPPPPVTQNNEERHF 344
>TC204052 homologue to UP|Q39835 (Q39835) Extensin, partial (67%)
Length = 1083
Score = 58.2 bits (139), Expect = 2e-08
Identities = 63/224 (28%), Positives = 81/224 (36%), Gaps = 12/224 (5%)
Frame = +3
Query: 146 GNSRRVLD-DSPRAPPPPPPSSFLYIGTVEPSRTSV------SDAQNLNSAKLASNYRYR 198
G S + D SP AP + I PS+T S +S Y
Sbjct: 3 GGSTKTQDMGSPMAPSLTLTIALTIISLTFPSQTLADNYIYSSPPPPKHSPPPPYYYHSP 182
Query: 199 PSPELQPLPPL---SKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNY 255
P P+ P PP S PP + PP SP + + +HSP S Y
Sbjct: 183 PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYY 362
Query: 256 Y--TPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPA 313
Y P +HS P + P K + P S P +H+ P ++ LPPP
Sbjct: 363 YHSPPPPKHSPPP---PYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSLPPPKH 533
Query: 314 PPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
P PP P PK S P ++PPPP PPPP
Sbjct: 534 SPPPPYYYHSPPP---PKHS----PPPPYYYHSPPPPKHSPPPP 644
Score = 44.3 bits (103), Expect = 2e-04
Identities = 69/302 (22%), Positives = 101/302 (32%), Gaps = 17/302 (5%)
Frame = +3
Query: 18 PLNSTPNARRILHQPLFPAGSAPPP----STPPP----PPPDTPSSPDIPFFNEYSPPPP 69
P +P H P P S PPP S PPP PPP SP P ++SPPPP
Sbjct: 138 PPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPP---KHSPPPP 308
Query: 70 DQALTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQ 129
+ PPP S P P K ++ + +S
Sbjct: 309 YYYHSPPPPKHSPPPPYYYHSPPPPKH--------------SPPPPYYYHSPPPPKHSPP 446
Query: 130 TSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSA 189
H P+ PPPP Y ++ P + S +S
Sbjct: 447 PPYYYHS----------------PPPPKHSPPPP----YYYHSLPPPKHSPPPPYYYHSP 566
Query: 190 KLASN-------YRYRPSPELQPLPP--LSKPPDEIHSPPAASSSSPSSSEDAESRETAF 240
+ Y P P+ P PP PP HSP ++ ++ + +
Sbjct: 567 PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPRSSLLLQVPTTTT*RALQIPI 746
Query: 241 HSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMI 300
S V ++ P+S SS+ VPFS TS + ++S +P ++ +
Sbjct: 747 TSTPSLQVQVPSSSLQVPISSTSSI---------QVPFSSTTSVQIQVS-PTPSLQVQIS 896
Query: 301 PS 302
PS
Sbjct: 897 PS 902
Score = 43.5 bits (101), Expect = 4e-04
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 32 PLFPAGSAPPP---STPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTAT 88
P++ S PPP +PPPPP PS P P + SPPPP PPP P
Sbjct: 757 PVYKYKSPPPPYKYPSPPPPPYKYPSPPP-PVYKYKSPPPPVYKYKSPPPPVHSPPPPVY 933
Query: 89 KPAKP 93
A P
Sbjct: 934 IYASP 948
Score = 40.0 bits (92), Expect = 0.004
Identities = 78/338 (23%), Positives = 107/338 (31%), Gaps = 24/338 (7%)
Frame = +3
Query: 9 ILLSLSLFTPLNSTPNARRILHQPLFPAGSAPPP----STPPP----PPPDTPSSPDIPF 60
I L++ T + T I P P S PPP S PPP PPP SP P
Sbjct: 63 IALTIISLTFPSQTLADNYIYSSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPP- 239
Query: 61 FNEYSPPPPDQALTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYK 120
++SPPPP + PPP S P P K ++ +
Sbjct: 240 --KHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKH--------------SPPPPYYYHS 371
Query: 121 HRANSNSNQTSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSV 180
+S H SP P PP + Y P
Sbjct: 372 PPPPKHSPPPPYYYH-------------------SPPPPKHSPPPPYYYHSPPPPK---- 482
Query: 181 SDAQNLNSAKLASNYRYRPSPELQPLPP--LSKPPDEIHSP--------PAASSSSPSSS 230
+S Y P P+ P PP PP HSP P SP
Sbjct: 483 ------HSPPPPYYYHSLPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPP 644
Query: 231 EDAESRETAFHSPHGSSVSHDDNN-----YYTPVSRHSSVANGSPAAATAVPFSKRTSPK 285
S HSP S + P++ S+ P+++ VP S +S +
Sbjct: 645 YYYHSPPPPKHSPRSSLLLQVPTTTT*RALQIPITSTPSLQVQVPSSSLQVPISSTSSIQ 824
Query: 286 SRLSA-SSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQL 322
S+ +S I+ + PS++ P + PS L
Sbjct: 825 VPFSSTTSVQIQVSPTPSLQVQISPSSCSFTTSPSLHL 938
Score = 34.3 bits (77), Expect = 0.24
Identities = 23/68 (33%), Positives = 26/68 (37%), Gaps = 3/68 (4%)
Frame = +1
Query: 301 PSIKHNPLPPP---PAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPP 357
P K+ PPP P+PP PP PS P + P PPPP PPP
Sbjct: 757 PVYKYKSPPPPYKYPSPPPPPYKY----PSPPPPVYKYKSPPPPVYKYKSPPPPVHSPPP 924
Query: 358 AARKVWSP 365
SP
Sbjct: 925 PVYIYASP 948
Score = 33.5 bits (75), Expect = 0.41
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Frame = +1
Query: 297 HAMIPSIKHNPLPPPPAP---PAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPP- 352
H P +P PPP P P+PP P + P +PPPPP
Sbjct: 679 HRAPPYYYKSPPPPPKEPYKYPSPP-----------PPVYKYKSPPPPYKYPSPPPPPYK 825
Query: 353 -PPPPPAARKVWSP 365
P PPP K SP
Sbjct: 826 YPSPPPPVYKYKSP 867
Score = 32.7 bits (73), Expect = 0.70
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 32 PLFPAGSAPPP----STPPPP------PPDTPSSPDIPFFNEYSPPPP 69
P + S PPP +PPPP PP SP P + SPPPP
Sbjct: 814 PPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPVHSPPPPVYIYASPPPP 957
Score = 29.3 bits (64), Expect = 7.8
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +1
Query: 32 PLFPAGSAPPPSTPPPPPPDTPSSPDIPFF-----NEYSP 66
P++ S PPP PPPP +SP P+ EY P
Sbjct: 874 PVYKYKSPPPPVHSPPPPVYIYASPPPPYHY*VISEEYKP 993
>TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich protein, partial
(20%)
Length = 1041
Score = 57.4 bits (137), Expect = 3e-08
Identities = 54/172 (31%), Positives = 67/172 (38%), Gaps = 10/172 (5%)
Frame = -2
Query: 206 LPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSV 265
LPP + PP + P A+S S S+ T SP +S TP +
Sbjct: 959 LPPTTLPP----TTPTATSPSSSTPLAVTQPPTVVASPPTTS---------TPPTTSQPP 819
Query: 266 ANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPS---IKHNPLPPPPA---PPAPPS 319
AN +P A P + + +P S A P I P + PLPPPP PP PP
Sbjct: 818 ANVAPKPAPVKPSAPKVAPASSPKAPPPQIPIPQPPKPSPVSPPPLPPPPVASPPPLPPP 639
Query: 320 ----TQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPPAARKVWSPAI 367
T PS P +T AP P P PPPPAA +P I
Sbjct: 638 KIAPTPAKTPPSPAPAKATPAPAPAPTKPAPTPSP--VPPPPAATPAPAPVI 489
Score = 42.7 bits (99), Expect = 7e-04
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Frame = -2
Query: 1 MKLKPYFLILLSLSLFTPLNSTPNARRILHQPLF----------PAGSAPPPSTPPPPPP 50
+KL P L + + +P +STP A + P P S PP + P P P
Sbjct: 965 VKLPPTTLPPTTPTATSPSSSTPLA--VTQPPTVVASPPTTSTPPTTSQPPANVAPKPAP 792
Query: 51 DTPSSPDIPFFNEYSPPPPDQALTQPPPSASIA------YPTATKPAKPAKKVA 98
PS+P + + PPP + QPP + ++ P A+ P P K+A
Sbjct: 791 VKPSAPKVAPASSPKAPPPQIPIPQPPKPSPVSPPPLPPPPVASPPPLPPPKIA 630
Score = 37.4 bits (85), Expect = 0.029
Identities = 48/176 (27%), Positives = 69/176 (38%), Gaps = 10/176 (5%)
Frame = -2
Query: 31 QPLFPAGSAPPP-STPP---PPPPDTPSSPDIPFFNEYSP------PPPDQALTQPPPSA 80
QP P+ +PPP PP PPP P P SP P P A T+P P+
Sbjct: 719 QPPKPSPVSPPPLPPPPVASPPPLPPPKIAPTPAKTPPSPAPAKATPAPAPAPTKPAPTP 540
Query: 81 SIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVD 140
S P PA + + A A + V A A ++HR + + ++ H+
Sbjct: 539 SPVPPPPAATPAPAPVIEVPAPAPAPVIEV-PAPAPAHHRHRRHRHRHR-----HR---- 390
Query: 141 GGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYR 196
R + R PP PP S T E S T+ + + +LN SN++
Sbjct: 389 ----RHQAPAPAPTIIRKSPPAPPDS-----TAE-SDTAPAPSPSLNLNAAPSNHQ 252
Score = 37.4 bits (85), Expect = 0.029
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 3/104 (2%)
Frame = -2
Query: 267 NGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGGP 326
N A V T P + +A+SP + + + PP PP+T
Sbjct: 992 NAQAPATVPVKLPPTTLPPTTPTATSPSSSTPLAVTQPPTVVASPPTTSTPPTTSQPPAN 813
Query: 327 SRRPKFSTHPLAPNMASLNTPPPPPPP---PPPPAARKVWSPAI 367
P AP +A ++P PPP P PP V P +
Sbjct: 812 VAPKPAPVKPSAPKVAPASSPKAPPPQIPIPQPPKPSPVSPPPL 681
Score = 35.8 bits (81), Expect = 0.083
Identities = 29/87 (33%), Positives = 34/87 (38%), Gaps = 10/87 (11%)
Frame = -2
Query: 18 PLNSTPNARRIL--HQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPP------- 68
P P+A ++ P P P P P P P P P P SPPP
Sbjct: 800 PAPVKPSAPKVAPASSPKAPPPQIPIPQPPKPSPVSPPPLPPPPV---ASPPPLPPPKIA 630
Query: 69 PDQALTQPPPSASIAYPT-ATKPAKPA 94
P A T P P+ + A P A P KPA
Sbjct: 629 PTPAKTPPSPAPAKATPAPAPAPTKPA 549
Score = 32.7 bits (73), Expect = 0.70
Identities = 24/80 (30%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Frame = -2
Query: 40 PPPSTPPP------PPPDTPSSPDIP-----FFNEYSPPPPDQALTQPPPSASIAYPTAT 88
P P P P PPP S P +P +PP P A P P+ + P T
Sbjct: 722 PQPPKPSPVSPPPLPPPPVASPPPLPPPKIAPTPAKTPPSPAPAKATPAPAPAPTKPAPT 543
Query: 89 KPAKPAKKVAIAASAAVVTV 108
P A A A V+ V
Sbjct: 542 PSPVPPPPAATPAPAPVIEV 483
Score = 29.3 bits (64), Expect = 7.8
Identities = 45/200 (22%), Positives = 71/200 (35%), Gaps = 14/200 (7%)
Frame = -2
Query: 155 SPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPD 214
+P PP + V+PS V+ A + + P P P+ P PP
Sbjct: 845 TPPTTSQPPANVAPKPAPVKPSAPKVAPASSPKAPPPQIPIPQPPKPS--PVSPPPLPPP 672
Query: 215 EIHSPP--AASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAA 272
+ SPP +P+ ++ S A +P + +PV A +PA
Sbjct: 671 PVASPPPLPPPKIAPTPAKTPPSPAPAKATPAPAPAPTKPAPTPSPVP-PPPAATPAPAP 495
Query: 273 ATAVPFSKRTSPKSRLSASSP------DIRHAMIPSIKHNPLPPP----PAPPAPP--ST 320
VP + +P + A +P RH P P P +PPAPP +
Sbjct: 494 VIEVP-APAPAPVIEVPAPAPAHHRHRRHRHRHRHRRHQAPAPAPTIIRKSPPAPPDSTA 318
Query: 321 QLDGGPSRRPKFSTHPLAPN 340
+ D P+ P + + N
Sbjct: 317 ESDTAPAPSPSLNLNAAPSN 258
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,204,679
Number of Sequences: 63676
Number of extensions: 1133961
Number of successful extensions: 76901
Number of sequences better than 10.0: 2237
Number of HSP's better than 10.0 without gapping: 12013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38668
length of query: 861
length of database: 12,639,632
effective HSP length: 105
effective length of query: 756
effective length of database: 5,953,652
effective search space: 4500960912
effective search space used: 4500960912
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0347b.5