BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0344.19
(654 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229152 similar to UP|Q6NQ48 (Q6NQ48) At1g34320, partial (32%) 418 e-117
TC228496 273 2e-73
CK606393 272 4e-73
AW278011 254 8e-68
TC228494 similar to UP|Q6NQ48 (Q6NQ48) At1g34320, partial (13%) 149 1e-54
AW755550 161 1e-39
AI960391 148 9e-36
TC228495 137 2e-32
TC210378 85 9e-17
TC208490 similar to GB|AAK32900.1|13605829|AF367313 AT5g04550/T3... 81 1e-15
TC233154 78 1e-14
TC222329 weakly similar to GB|AAK32900.1|13605829|AF367313 AT5g0... 70 2e-12
TC213703 weakly similar to GB|AAK32900.1|13605829|AF367313 AT5g0... 68 1e-11
CO980104 68 1e-11
TC224291 similar to UP|Q7R8P9 (Q7R8P9) Homeobox-containing prote... 64 2e-10
AW164475 weakly similar to GP|12003396|gb| Avr9/Cf-9 rapidly eli... 57 2e-08
TC204214 homologue to GB|BAC22311.1|24414062|AP003884 60S riboso... 47 3e-05
BG155524 similar to PIR|D86467|D864 protein F23M19.3 [imported] ... 45 1e-04
TC210639 similar to GB|AAK32900.1|13605829|AF367313 AT5g04550/T3... 43 5e-04
BE440360 42 7e-04
>TC229152 similar to UP|Q6NQ48 (Q6NQ48) At1g34320, partial (32%)
Length = 953
Score = 418 bits (1074), Expect = e-117
Identities = 213/230 (92%), Positives = 219/230 (94%)
Frame = +1
Query: 425 VKSALRTRLQSFQVKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSD 484
VKSALR+RLQSFQVKEELTV QIKAEMEK LQWLVPIA NTTKAHHGFGWVGEWANTGS+
Sbjct: 1 VKSALRSRLQSFQVKEELTVPQIKAEMEKILQWLVPIAANTTKAHHGFGWVGEWANTGSE 180
Query: 485 VNRKPAGQTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQVRVGNGGIRSPAKSPIRS 544
VNRKPAGQTDLLRIETLHHADK+KTEAYILELV+WLHHLVSQVRVGNGGIRSP KSPI S
Sbjct: 181 VNRKPAGQTDLLRIETLHHADKDKTEAYILELVIWLHHLVSQVRVGNGGIRSPVKSPICS 360
Query: 545 PTQKTGQLFTHKGCSTSPMLTFEDQQMLRDVSKRKLTPGISKSQEFSTAKTRLSKHHRLS 604
PTQKTGQLFT K CS SPMLT EDQQMLRDVSKRKLTPGISKSQEF +AKTRLSKHHRLS
Sbjct: 361 PTQKTGQLFTQKACS-SPMLTVEDQQMLRDVSKRKLTPGISKSQEFDSAKTRLSKHHRLS 537
Query: 605 KSSSHSPISESKNDMFSTRRVLPSVPVIDFDIDRMKALDVIDRVDTIGSS 654
KSSSHSPISESKND+FSTRRV PSVPVIDFDIDRMKALDVIDRVDTIGSS
Sbjct: 538 KSSSHSPISESKNDIFSTRRV-PSVPVIDFDIDRMKALDVIDRVDTIGSS 684
>TC228496
Length = 762
Score = 273 bits (697), Expect = 2e-73
Identities = 139/253 (54%), Positives = 183/253 (71%)
Frame = +1
Query: 271 QLMTYVQYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVR 330
QLMT +T ELYHEL ALD+ +QD++RK +EED QRGDSLA+LR+E+KS + +R
Sbjct: 4 QLMTLADFTVELYHELDALDKLEQDFQRKCEEED-----QRGDSLALLRAEIKSHMRQIR 168
Query: 331 NLKKKSLWSKILEEVMEKFVDVVNFLYLEIHEAFGSADPDKQVKDSQGNHKKLGSAGLAL 390
+LKKKSLW + LEEV+ K V +V FL+LEI A G+AD + N ++LG AGLAL
Sbjct: 169 HLKKKSLWCRSLEEVVRKLVAIVLFLHLEISNALGNADDHGPLTGHMSNCQRLGPAGLAL 348
Query: 391 HYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQVKEELTVQQIKAE 450
H+ANI+ QIDTLV + S++P NT+D LYQ LPPN+K ALR++L S + EE++V I E
Sbjct: 349 HHANIVLQIDTLVDK-STMPANTKDALYQSLPPNIKLALRSKLPSLRAVEEISVAYITYE 525
Query: 451 MEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTDLLRIETLHHADKEKTE 510
M K L WLVP+A NT+KAH FGW+GEWA +G +V +K T ++ IET +HAD+EK E
Sbjct: 526 MHKKLHWLVPMAINTSKAHKRFGWLGEWAYSGYEVKKK----TGVMWIETFYHADREKVE 693
Query: 511 AYILELVVWLHHL 523
ILEL++WLH L
Sbjct: 694 HCILELLLWLHRL 732
>CK606393
Length = 814
Score = 272 bits (695), Expect = 4e-73
Identities = 141/211 (66%), Positives = 165/211 (77%)
Frame = +2
Query: 78 GTSGDDINDGIPSLSRALSHKSRSTRSRQAAVKVSEVSSLLGRAGTAGLGKAVEVLDTLG 137
G DD DGIP + + HKSRS +SR A KVSEVS LGRAG ++VLDTLG
Sbjct: 206 GNGSDDFYDGIPRFNDSFPHKSRSVKSRHAVAKVSEVSLRLGRAG-------IDVLDTLG 364
Query: 138 SSMTNLNLSSGFTSGVATKGNKISILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSE 197
SSMTNL+ + GF SG TKGN+I ILAFEVANTIVKG +LM+SLS +NIKHLKE VL E
Sbjct: 365 SSMTNLS-AGGFVSGAVTKGNEIGILAFEVANTIVKGFSLMESLSTKNIKHLKEEVLQLE 541
Query: 198 GVQNLISRDMNELLRIAAADKREELKIFSGEVVRFGNRCKDPQWHNLDRYFEKLGSELTP 257
VQ+L+S+D +ELL+I ADKR+ELK+FS EV+RFGNR KDPQWHNLDRYFEK+ EL
Sbjct: 542 AVQDLVSKDTDELLKIVGADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKVSRELNS 721
Query: 258 QKQLKEEAEVVMQQLMTYVQYTAELYHELHA 288
Q+Q KEEAE++MQQLMT VQ+TAELYHELHA
Sbjct: 722 QRQSKEEAELLMQQLMTMVQFTAELYHELHA 814
>AW278011
Length = 391
Score = 254 bits (649), Expect = 8e-68
Identities = 123/130 (94%), Positives = 128/130 (97%)
Frame = +1
Query: 229 VVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHELHA 288
VVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKEEAE+VMQQLMT+VQYTAELYHELHA
Sbjct: 1 VVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKEEAEMVMQQLMTFVQYTAELYHELHA 180
Query: 289 LDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKKSLWSKILEEVMEK 348
LDRFDQDYRRK QEEDNSNATQRGDSLAILR+ELKSQKKHVRNLKKKSLWSKILEEVMEK
Sbjct: 181 LDRFDQDYRRKFQEEDNSNATQRGDSLAILRAELKSQKKHVRNLKKKSLWSKILEEVMEK 360
Query: 349 FVDVVNFLYL 358
VD+V+FLYL
Sbjct: 361 LVDIVHFLYL 390
>TC228494 similar to UP|Q6NQ48 (Q6NQ48) At1g34320, partial (13%)
Length = 631
Score = 149 bits (377), Expect(2) = 1e-54
Identities = 80/164 (48%), Positives = 107/164 (64%), Gaps = 2/164 (1%)
Frame = +3
Query: 445 QQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTDLLRIETLHHA 504
+ I EMEKTL WL P+ATNT+KAHHGFGWVGEWANTGS+V + T ++RIET HHA
Sbjct: 177 RDITDEMEKTLHWLSPMATNTSKAHHGFGWVGEWANTGSEVRK-----TGVMRIETFHHA 341
Query: 505 DKEKTEAYILELVVWLHHLV--SQVRVGNGGIRSPAKSPIRSPTQKTGQLFTHKGCSTSP 562
DK+K E YILEL++WLH L S+ G +R KSP+ + QKT + +
Sbjct: 342 DKDKVEYYILELLLWLHRLAIRSKAVSDAGKVRPAIKSPVGTALQKTNEQIS-------- 497
Query: 563 MLTFEDQQMLRDVSKRKLTPGISKSQEFSTAKTRLSKHHRLSKS 606
+LT ++Q ML+DV+K+ ISKS +F + R ++ RL+KS
Sbjct: 498 LLTIDEQNMLQDVNKKIPIRRISKSLDFDSLNIRFRENCRLTKS 629
Score = 82.8 bits (203), Expect(2) = 1e-54
Identities = 40/63 (63%), Positives = 52/63 (82%)
Frame = +1
Query: 381 KKLGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQVKE 440
++LG AGLALHYANI+ QIDTLV+RSS +P NT+D LYQ LPPN+K AL ++L S +V E
Sbjct: 1 ERLGPAGLALHYANIVLQIDTLVARSS-IPANTKDALYQSLPPNIKLALHSKLPSLRVVE 177
Query: 441 ELT 443
E++
Sbjct: 178 EIS 186
>AW755550
Length = 435
Score = 161 bits (407), Expect = 1e-39
Identities = 76/144 (52%), Positives = 108/144 (74%)
Frame = +3
Query: 177 LMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKREELKIFSGEVVRFGNRC 236
L QSL++ENI+ LK VL SEGVQ L+S D+ +L+ +A ADKREEL +FS EV+RFGN C
Sbjct: 3 LFQSLAEENIQFLKNEVLQSEGVQLLVSNDVEKLITLAEADKREELNVFSREVIRFGNMC 182
Query: 237 KDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHELHALDRFDQDY 296
KDPQWHNLDRYF +L ++ K+ +E+AE MQ+ + V+ TAELYHEL+A +RF+QDY
Sbjct: 183 KDPQWHNLDRYFSRLDFDVLDDKRYQEDAEKTMQEFTSLVRNTAELYHELNAYERFEQDY 362
Query: 297 RRKLQEEDNSNATQRGDSLAILRS 320
+K++E ++ N + +S+ + +S
Sbjct: 363 LQKIKEMESLNLPLKWESITMFQS 434
>AI960391
Length = 417
Score = 148 bits (373), Expect = 9e-36
Identities = 70/109 (64%), Positives = 86/109 (78%)
Frame = +1
Query: 373 VKDSQGNHKKLGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTR 432
VK G+ ++LG AGL+LHYANII QI+ + SR + +PPN RDTLY GLP N+KSAL +R
Sbjct: 25 VKHCNGS-ERLGEAGLSLHYANIINQINMIASRPTVLPPNIRDTLYHGLPNNIKSALPSR 201
Query: 433 LQSFQVKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANT 481
+ S +EL++ Q+KAEM+KTLQWL P ATNTTKAH GFGWVGEWANT
Sbjct: 202 MXSIDAMKELSITQVKAEMDKTLQWLNPFATNTTKAHQGFGWVGEWANT 348
>TC228495
Length = 1321
Score = 137 bits (344), Expect = 2e-32
Identities = 69/148 (46%), Positives = 98/148 (65%)
Frame = +2
Query: 393 ANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQVKEELTVQQIKAEME 452
+++ TQ+D S++P NT+D LYQ LPPN+K ALR++L S + EE++V I EM
Sbjct: 746 SSVETQVD-----KSTMPANTKDALYQSLPPNIKLALRSKLPSLRAVEEISVAYITYEMH 910
Query: 453 KTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTDLLRIETLHHADKEKTEAY 512
K L WLVP+A NT+KAH FGW+GEWA +G +V +K T ++ IET +HAD+EK E
Sbjct: 911 KKLHWLVPMAINTSKAHKRFGWLGEWAYSGYEVKKK----TGVMWIETFYHADREKVEHC 1078
Query: 513 ILELVVWLHHLVSQVRVGNGGIRSPAKS 540
ILEL++WLH L + + + I +S
Sbjct: 1079ILELLLWLHRLAIRSKAHSDAIAG*VRS 1162
>TC210378
Length = 751
Score = 85.1 bits (209), Expect = 9e-17
Identities = 54/173 (31%), Positives = 92/173 (52%), Gaps = 9/173 (5%)
Frame = +2
Query: 483 SDVNRKPAGQTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQVRVGNGGI------RS 536
+D + +++L+R+ETL++ADK K + YI+EL+ WLH +S V+ + RS
Sbjct: 8 NDFGDNTSKESNLIRLETLYYADKRKIDVYIIELLAWLHXXISSVKSRQNTLRPMPTTRS 187
Query: 537 PAKSPIRSPTQKTGQLFTHKGCSTSPM---LTFEDQQMLRDVSKRKLTPGISKSQEFSTA 593
P K + ++ L S P+ ++ ED+++L +V R+ +PG+SKS++ A
Sbjct: 188 PPKG-LELQSKMRQFLILSVDSSNKPLGTQISHEDRRLLEEVIARRKSPGLSKSEDLGLA 364
Query: 594 KTRLSKHHRLSKSSSHSPISESKNDMFSTRRVLPSVPVIDFDIDRMKALDVID 646
K R KH +++KS+ SP E F TR+V F+ LD++D
Sbjct: 365 KKRHVKHLQVTKSAGSSPAKE----FFGTRQV--------FNHQNYNVLDIMD 487
>TC208490 similar to GB|AAK32900.1|13605829|AF367313 AT5g04550/T32M21_140
{Arabidopsis thaliana;} , partial (25%)
Length = 1234
Score = 81.3 bits (199), Expect = 1e-15
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Frame = +3
Query: 381 KKLGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQ--- 437
+ LG+A LALHYAN+I I+ L + + + RD LY LP ++SALRT+L+ +
Sbjct: 390 ESLGAASLALHYANVIIMIEKLATSPYLIGVDARDDLYNMLPRRLRSALRTKLKPYSKAM 569
Query: 438 ---VKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTD 494
V + ++ M L+WL P+A N + W + S +T+
Sbjct: 570 AAAVYDAGLAEEWTEAMTAILEWLAPLAHNMLR----------WQSERSYEQHCFVSRTN 719
Query: 495 LLRIETLHHADKEKTEAYILELVVWLHHLVSQVRVGN 531
+L ++TL+ A +EKTEA I EL+V L+++ R N
Sbjct: 720 VLLVQTLYFASQEKTEAIITELLVGLNYVWRYAREFN 830
>TC233154
Length = 744
Score = 78.2 bits (191), Expect = 1e-14
Identities = 51/152 (33%), Positives = 78/152 (50%), Gaps = 7/152 (4%)
Frame = +2
Query: 502 HHADKEKTEAYILELVVWLHHLVSQVRVGNGGIRS-PAKSPIRSPTQKTGQ---LFTHKG 557
++ADK + YI+EL+ WLHHL+S V +R P +SP + ++ L
Sbjct: 47 YYADKXXIDVYIIELLAWLHHLISSVXSRQNTLRPMPTRSPPKGHELQSKMRQLLILSVD 226
Query: 558 CSTSPM---LTFEDQQMLRDVSKRKLTPGISKSQEFSTAKTRLSKHHRLSKSSSHSPISE 614
S P+ ++ ED+++L DV RK PG+SKS++ AK R KH +++KS+ SP E
Sbjct: 227 SSNKPLGTQISHEDRRLLEDVIARKKNPGLSKSEDLGLAKKRQVKHLQVTKSAGSSPAKE 406
Query: 615 SKNDMFSTRRVLPSVPVIDFDIDRMKALDVID 646
F TR V F+ LD++D
Sbjct: 407 ----FFGTRLV--------FNHQNYNVLDIMD 466
>TC222329 weakly similar to GB|AAK32900.1|13605829|AF367313
AT5g04550/T32M21_140 {Arabidopsis thaliana;} , partial
(23%)
Length = 662
Score = 70.5 bits (171), Expect = 2e-12
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = +3
Query: 160 ISILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKR 219
I +LAFEVA+ + K NL QSLS + + L+E + S G++ L+S D N ++R+ + +
Sbjct: 255 IGVLAFEVASLMSKLVNLWQSLSDKQVAKLREEITNSLGIRKLVSEDENFIVRLISLEML 434
Query: 220 EELKIFSGEVVRFGNRCKDPQWHNLDRYFEKL---GSELTPQKQLKEEAEVVMQQLMTYV 276
E + + V RFG +C DP + + F++L G + ++ E ++++ ++
Sbjct: 435 ENMAHVAESVARFGKKCSDPSLKDFENAFDELITFGVDPYRWGFTFKKMEKKVKRMEKFI 614
Query: 277 QYTAELYHELHAL 289
A LY E+ L
Sbjct: 615 STNATLYQEMELL 653
>TC213703 weakly similar to GB|AAK32900.1|13605829|AF367313
AT5g04550/T32M21_140 {Arabidopsis thaliana;} , partial
(16%)
Length = 643
Score = 68.2 bits (165), Expect = 1e-11
Identities = 47/148 (31%), Positives = 75/148 (49%), Gaps = 7/148 (4%)
Frame = +1
Query: 383 LGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQ-------S 435
LG A LALHYAN+I I+ ++S V RD LY LP V +ALR +L+ S
Sbjct: 64 LGDAALALHYANMIVLIERMLSSPHLVDLAARDDLYNMLPTTVTTALRAKLKCHAKSKSS 243
Query: 436 FQVKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTDL 495
+ + + + L+WL P+A N H + E + ++V
Sbjct: 244 SNAHDANPAAEWSPVLAQILEWLAPLAHNMLSWHSERNFEKEHSVFNANV---------- 393
Query: 496 LRIETLHHADKEKTEAYILELVVWLHHL 523
L ++TL+ A++ KTEA I++L+V L+++
Sbjct: 394 LLVQTLYFANQAKTEAAIIDLLVGLNYV 477
>CO980104
Length = 835
Score = 67.8 bits (164), Expect = 1e-11
Identities = 40/145 (27%), Positives = 74/145 (50%), Gaps = 4/145 (2%)
Frame = -2
Query: 383 LGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPP----NVKSALRTRLQSFQV 438
LG LALHYAN+ ++ L+ V R+ LYQ LP ++K L+T +++ +
Sbjct: 696 LGGCALALHYANVXXVMEKLLRYPHLVGEEARNNLYQMLPTSLRLSLKGKLKTYIKNLAI 517
Query: 439 KEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTDLLRI 498
+ K ++ L+WL P+A N + W + + + +T++L
Sbjct: 516 YDAPLAHDWKVTLDGILKWLAPLAHNMIR----------WQSERNFEQHQIVNRTNVLLF 367
Query: 499 ETLHHADKEKTEAYILELVVWLHHL 523
+TL+ ADK++TE I +L++ L+++
Sbjct: 366 QTLYFADKDRTEEAICQLLMGLNYI 292
>TC224291 similar to UP|Q7R8P9 (Q7R8P9) Homeobox-containing protein
(Fragment), partial (5%)
Length = 667
Score = 64.3 bits (155), Expect = 2e-10
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +2
Query: 281 ELYHELHALDRFDQDYRRKLQEEDNSNATQRG 312
ELYH+LHALDRFDQ YRRKLQE+DNSNAT+RG
Sbjct: 176 ELYHQLHALDRFDQHYRRKLQEQDNSNATERG 271
>AW164475 weakly similar to GP|12003396|gb| Avr9/Cf-9 rapidly elicited
protein 137 {Nicotiana tabacum}, partial (10%)
Length = 439
Score = 57.4 bits (137), Expect = 2e-08
Identities = 33/86 (38%), Positives = 48/86 (55%)
Frame = +1
Query: 160 ISILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKR 219
+ ILAF+ T+ +L SLS + I L++ V+ S+GV L S+ LL +AAA++
Sbjct: 169 LGILAFDAGKTMCHLISLYHSLSDKEITKLRKEVINSKGVTYLNSQHECFLLNLAAAERL 348
Query: 220 EELKIFSGEVVRFGNRCKDPQWHNLD 245
EEL + V RFG +C DP D
Sbjct: 349 EELDTAADTVSRFGRKCSDPSLSRFD 426
>TC204214 homologue to GB|BAC22311.1|24414062|AP003884 60S ribosomal protein
L7A {Oryza sativa (japonica cultivar-group);} , partial
(7%)
Length = 697
Score = 47.0 bits (110), Expect = 3e-05
Identities = 21/32 (65%), Positives = 24/32 (74%)
Frame = +2
Query: 281 ELYHELHALDRFDQDYRRKLQEEDNSNATQRG 312
ELY ELHA DRF QDY+ K +E+DNS A Q G
Sbjct: 116 ELYMELHAXDRFAQDYQHKREEDDNSGAAQSG 211
>BG155524 similar to PIR|D86467|D864 protein F23M19.3 [imported] -
Arabidopsis thaliana, partial (3%)
Length = 289
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = -2
Query: 608 SHSPISESKNDMFSTRRVLPSVPVIDFDIDRMKALDVIDRVD 649
S+S S S++ S R+L +PVIDF ID+ +ALDVIDR+D
Sbjct: 288 SYSYSSTSRSKELSFNRILSKLPVIDFGIDKKRALDVIDRLD 163
>TC210639 similar to GB|AAK32900.1|13605829|AF367313 AT5g04550/T32M21_140
{Arabidopsis thaliana;} , partial (23%)
Length = 701
Score = 42.7 bits (99), Expect = 5e-04
Identities = 30/115 (26%), Positives = 54/115 (46%)
Frame = +3
Query: 409 VPPNTRDTLYQGLPPNVKSALRTRLQSFQVKEELTVQQIKAEMEKTLQWLVPIATNTTKA 468
V R +L L P K+ + S + + ++ M L+WL P+A N +
Sbjct: 225 VTRRVRASLKAKLKPYTKTLASS--SSSSIYDPSLAEEWNEAMSSILEWLAPLAHNMIR- 395
Query: 469 HHGFGWVGEWANTGSDVNRKPAGQTDLLRIETLHHADKEKTEAYILELVVWLHHL 523
W + S + +T++L ++TL+ A++EKTE I EL+V L+++
Sbjct: 396 ---------WQSERSYEQQSFISRTNVLLVQTLYFANQEKTEEVITELLVGLNYV 533
Score = 38.1 bits (87), Expect = 0.012
Identities = 19/39 (48%), Positives = 25/39 (63%)
Frame = +1
Query: 383 LGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGL 421
LG+A LALHYAN+I I+ L + S + + RD LY L
Sbjct: 112 LGAAALALHYANVIIVIEKLAASSHLIGLDARDDLYNML 228
>BE440360
Length = 454
Score = 42.4 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +2
Query: 367 ADPDKQVKDSQGNHKKLGSAGLALHYANIITQIDTLVS 404
AD + N ++LG AGLALH+ANI+ QIDTLVS
Sbjct: 35 ADDHGPLTGHMSNCQRLGPAGLALHHANIVLQIDTLVS 148
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,262,037
Number of Sequences: 63676
Number of extensions: 284551
Number of successful extensions: 1384
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of query: 654
length of database: 12,639,632
effective HSP length: 103
effective length of query: 551
effective length of database: 6,081,004
effective search space: 3350633204
effective search space used: 3350633204
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0344.19