
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0343.3
(521 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225075 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 582 e-166
TC225101 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 404 e-122
TC203493 similar to UP|Q9M3B0 (Q9M3B0) Pectinesterase-like prote... 375 e-104
TC203506 similar to UP|Q9FK05 (Q9FK05) Pectinesterase, partial (... 365 e-101
TC208452 similar to UP|Q9FF77 (Q9FF77) Pectinesterase, partial (... 340 7e-94
TC218158 similar to UP|Q7XAF8 (Q7XAF8) Papillar cell-specific pe... 335 2e-92
TC225094 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 329 2e-90
TC224917 similar to GB|AAK32841.1|13605696|AF361829 At2g45220/F4... 207 2e-81
TC217842 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 prec... 298 5e-81
TC217339 homologue to UP|Q8RVX1 (Q8RVX1) Pectin methylesterase p... 285 3e-77
TC230039 homologue to UP|Q9M5J0 (Q9M5J0) Pectin methylesterase i... 262 3e-70
TC231406 similar to UP|Q9FF78 (Q9FF78) Pectinesterase, partial (... 260 9e-70
TC232911 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 254 8e-68
CA851330 similar to PIR|T12995|T12 pectinesterase homolog T21L8.... 246 2e-65
TC211743 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 prec... 239 2e-63
TC220076 homologue to UP|PME3_PHAVU (Q43111) Pectinesterase 3 pr... 234 5e-62
CK606276 230 1e-60
TC210310 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 prec... 229 2e-60
TC225099 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 229 3e-60
TC218157 similar to UP|Q8GUF8 (Q8GUF8) At2g47550/T30B22.15, part... 224 9e-59
>TC225075 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (87%)
Length = 1744
Score = 582 bits (1500), Expect = e-166
Identities = 305/516 (59%), Positives = 385/516 (74%), Gaps = 2/516 (0%)
Frame = +1
Query: 8 TPTLILLLIMSLQPCTTPSSASTITEFSGLSCLRVSPNRFIDSANKVINLLQNVSYNLSP 67
TP+L ++ L CT +A T +F+G +CL+VSP+ F S +VI ++ ++ LS
Sbjct: 40 TPSLTFSFLLFLAICTPLDAAHT--DFAGSACLKVSPSHFAGSVTEVIAAIRQLASILSR 213
Query: 68 FTKVNQDNDNRLSNAISDCLELFDMAYENLKWSISATQNHQGNKNNGTGNLSSDLRTWIS 127
F + RLS AI+DCL+L D++ + L W++SA+QN +G K+N TGNLSSDLRTW+S
Sbjct: 214 FGSPLANF--RLSTAIADCLDLLDLSSDVLSWALSASQNPKG-KHNSTGNLSSDLRTWLS 384
Query: 128 AVLSYQETCIDGFEGTNSNVKDHVSGGLDQVISLVKNELLLQVVPDSDPSNISNS-GEFP 186
A L++ ETC++GFEGTNS VK VS G+ QV+SLV+ +LL QV+P D + ++S G+FP
Sbjct: 385 AALAHPETCMEGFEGTNSIVKGLVSAGIGQVVSLVE-QLLAQVLPAQDQFDAASSKGQFP 561
Query: 187 SWVKAEDEKLLQQDAPPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVIHVKKGIYK 246
SW+K ++ KLLQ A P DV VA DGSGNY +MDAV AP+Y+M R+VI VKKG+Y
Sbjct: 562 SWIKPKERKLLQAIAVTP--DVTVALDGSGNYAKIMDAVLAAPDYSMKRFVILVKKGVYV 735
Query: 247 EYVEIKKKKWNIMIVGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENT 306
E VEIKKKKWNIMI+G GMD T ISGNRS D TTFR+ATFAVS GFIARDI+F+NT
Sbjct: 736 ENVEIKKKKWNIMILGQGMDATVISGNRSVV-DGWTTFRSATFAVSGRGFIARDISFQNT 912
Query: 307 AGPENKQAVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAV 366
AGPE QAVALRSDSDLSVF+RCGI GYQDSLY H+ RQF+++C I GTVD+I G+A AV
Sbjct: 913 AGPEKHQAVALRSDSDLSVFFRCGIFGYQDSLYTHTMRQFFRDCTISGTVDYIFGDATAV 1092
Query: 367 FQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRP 426
FQNC ++ KK L +QKNTI A R PN+ +GFSF C I D D PS G+ QT+LGRP
Sbjct: 1093FQNCFLRVKKGLPNQKNTITAHGRKDPNEPTGFSFQFCNITADSDLIPSVGTAQTYLGRP 1272
Query: 427 WKNFSRTVFMESFMSEMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYH 486
WK++SRTVFM+S+MSE+I EGWLEW N DTL++ EY N G G+GVANRVKW GYH
Sbjct: 1273WKSYSRTVFMQSYMSEVIGAEGWLEWNGNFAL-DTLYYAEYMNTGAGAGVANRVKWPGYH 1449
Query: 487 VLN-NSQAMDFTVNQFIKGDLWLPSTGVSYNAGLLV 521
LN +SQA +FTV+QFI+G+LWLPSTGV++ AGL V
Sbjct: 1450ALNDSSQASNFTVSQFIEGNLWLPSTGVTFTAGLTV 1557
>TC225101 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (64%)
Length = 1177
Score = 404 bits (1039), Expect(2) = e-122
Identities = 201/310 (64%), Positives = 243/310 (77%), Gaps = 4/310 (1%)
Frame = +3
Query: 214 GSGNYTTVMDAVKDAPEYNMTRYVIHVKKGIYKEYVEIKKKKWNIMIVGDGMDVTTISGN 273
G NYT VMDAV AP Y+M RYVIH+K+G+Y E VEIKKKKWN+M+VGDGMD T ISGN
Sbjct: 207 GRENYTKVMDAVLAAPNYSMQRYVIHIKRGVYYENVEIKKKKWNLMMVGDGMDATIISGN 386
Query: 274 RSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSDSDLSVFYRCGIKG 333
RS+ D TTFR+ATFAVS GFIARDITF+NTAGPE QAVALRSDSDLSVF+RCGI G
Sbjct: 387 RSF-IDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFFRCGIFG 563
Query: 334 YQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRTHP 393
YQDSLY H+ RQFY+EC+I GTVDFI G+A A+FQNC I KK L +QKNTI A R +P
Sbjct: 564 YQDSLYTHTMRQFYRECKISGTVDFIFGDATAIFQNCHISAKKGLPNQKNTITAHGRKNP 743
Query: 394 NQTSGFSFHNCTIIPDPDF---QPSNGSIQTFLGRPWKNFSRTVFMESFMSEMIHPEGWL 450
++ +GFS C I D D S S T+LGRPWK +SRT+FM+S++S+++ PEGWL
Sbjct: 744 DEPTGFSIQFCNISADYDLVNSVNSCNSTHTYLGRPWKPYSRTIFMQSYISDVLRPEGWL 923
Query: 451 EWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLN-NSQAMDFTVNQFIKGDLWLP 509
EW + DTL++ EY N GPG+GVANRVKW+GYHV+N +SQA +FTV+QFI+G+L LP
Sbjct: 924 EWNGDFAL-DTLYYAEYMNYGPGAGVANRVKWQGYHVMNDSSQASNFTVSQFIEGNLCLP 1100
Query: 510 STGVSYNAGL 519
STGV++ AGL
Sbjct: 1101STGVTFTAGL 1130
Score = 54.3 bits (129), Expect(2) = e-122
Identities = 36/74 (48%), Positives = 47/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 144 NSNVKDHVSGGLDQVISLVKNELLLQVVPDSDPSNISN-SGEFPSWVKAEDEKLLQQDAP 202
N VK VS G+ QV+SL++ +LL QV P SD + S+ G++PSWVK + KLLQ A
Sbjct: 2 NGMVKGLVSTGIGQVMSLLQ-QLLTQVKPVSDHFSFSSPQGQYPSWVKTGERKLLQ--AN 172
Query: 203 PPPADVVVAADGSG 216
D VV ADG+G
Sbjct: 173 VVSFDAVVTADGTG 214
>TC203493 similar to UP|Q9M3B0 (Q9M3B0) Pectinesterase-like protein
(At3g49220), partial (59%)
Length = 1298
Score = 375 bits (962), Expect = e-104
Identities = 177/337 (52%), Positives = 235/337 (69%), Gaps = 2/337 (0%)
Frame = +1
Query: 185 FPSWVKAEDEKLLQQDAPPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVIHVKKGI 244
FP+W+ D +LL AD+VV+ DG+G T+ +A+K PEY+ R +I+++ G
Sbjct: 139 FPTWLNGRDRRLLSLPLSQIQADIVVSKDGNGTVKTIAEAIKKVPEYSSRRIIIYIRAGR 318
Query: 245 YKE-YVEIKKKKWNIMIVGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITF 303
Y+E +++ +KK N+M +GDG T I+G R+Y + N+TTF TA+FA S GFIA+D+TF
Sbjct: 319 YEEDNLKLGRKKTNVMFIGDGKGKTVITGGRNY-YQNLTTFHTASFAASGSGFIAKDMTF 495
Query: 304 ENTAGPENKQAVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNA 363
EN AGP QAVALR +D +V YRC I GYQD++Y HS RQFY+EC I GTVDFI GNA
Sbjct: 496 ENYAGPGRHQAVALRVGADHAVVYRCNIIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNA 675
Query: 364 AAVFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFL 423
A VFQNC + +KP+ QKNTI AQ+R PNQ +G S HNC I+ PD + S GS T+L
Sbjct: 676 AVVFQNCTLWARKPMAQQKNTITAQNRKDPNQNTGISIHNCRIMATPDLEASKGSYPTYL 855
Query: 424 GRPWKNFSRTVFMESFMSEMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWR 483
GRPWK ++RTVFM S++ + +HP GWLEW T++ DT ++GEY N GPGS + RV W
Sbjct: 856 GRPWKLYARTVFMLSYIGDHVHPRGWLEWNTSSFALDTCYYGEYMNYGPGSALGQRVNWA 1035
Query: 484 GYHVLNNS-QAMDFTVNQFIKGDLWLPSTGVSYNAGL 519
GY +N++ +A FTV QFI G WLPSTGV++ AGL
Sbjct: 1036GYRAINSTVEASRFTVGQFISGSSWLPSTGVAFIAGL 1146
>TC203506 similar to UP|Q9FK05 (Q9FK05) Pectinesterase, partial (57%)
Length = 1320
Score = 365 bits (938), Expect = e-101
Identities = 177/339 (52%), Positives = 232/339 (68%), Gaps = 2/339 (0%)
Frame = +2
Query: 183 GEFPSWVKAEDEKLLQQDAPPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVIHVKK 242
G+FP W+ D +LL AD+ V+ G+G T+ +A+K APE++ R++I+V+
Sbjct: 5 GKFPGWLNKRDRRLLSLPLSAIQADITVSKTGNGTVKTIAEAIKKAPEHSTRRFIIYVRA 184
Query: 243 GIYKEY-VEIKKKKWNIMIVGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDI 301
G Y+E +++ +KK N+M +GDG T I+G ++ D +TTF +A+FA S GFIARDI
Sbjct: 185 GRYEENNLKVGRKKTNVMFIGDGKGKTVITGKKNV-IDGMTTFHSASFAASGAGFIARDI 361
Query: 302 TFENTAGPENKQAVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICG 361
TFEN AGP QAVALR +D +V YRC I GYQDS Y HS RQF++EC I GTVDFI G
Sbjct: 362 TFENYAGPAKHQAVALRVGADHAVVYRCNIVGYQDSCYVHSNRQFFRECNIYGTVDFIFG 541
Query: 362 NAAAVFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQT 421
NAA VFQ C I +KP+ QKNTI AQ+R PNQ +G S HNC I+P PD P GS T
Sbjct: 542 NAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISLHNCRILPAPDLAPVKGSFPT 721
Query: 422 FLGRPWKNFSRTVFMESFMSEMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVK 481
+LGRPWK +SRTV++ S+M + IHP GWLEW + +TL++GEY N GPG+ V RV+
Sbjct: 722 YLGRPWKQYSRTVYLVSYMGDHIHPRGWLEWNGDFAL-NTLYYGEYMNYGPGAAVGQRVQ 898
Query: 482 WRGYHVLNNS-QAMDFTVNQFIKGDLWLPSTGVSYNAGL 519
W GY V+ ++ +A FTV QFI G WLPSTGV++ AGL
Sbjct: 899 WPGYRVIKSTMEANRFTVAQFISGSAWLPSTGVAFAAGL 1015
>TC208452 similar to UP|Q9FF77 (Q9FF77) Pectinesterase, partial (56%)
Length = 1273
Score = 340 bits (873), Expect = 7e-94
Identities = 168/316 (53%), Positives = 218/316 (68%), Gaps = 3/316 (0%)
Frame = +1
Query: 208 VVVAADGSGNYTTVMDAVKDAPEYNMTR---YVIHVKKGIYKEYVEIKKKKWNIMIVGDG 264
V+V+ G NYT++ DA+ AP ++++V++G+Y+EYV I K+K NI++VGDG
Sbjct: 292 VIVSHYGIDNYTSIGDAIAAAPNNTKPEDGYFLVYVREGLYEEYVVIPKEKKNILLVGDG 471
Query: 265 MDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSDSDLS 324
++ T I+GN S D TTF ++TFAVS FIA D+TF NTAGPE QAVA+R+++DLS
Sbjct: 472 INKTIITGNHSV-IDGWTTFNSSTFAVSGERFIAVDVTFRNTAGPEKHQAVAVRNNADLS 648
Query: 325 VFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNT 384
FYRC +GYQD+LY HS RQFY+EC I GTVDFI GNAA VFQ C I +KPL +QKN
Sbjct: 649 TFYRCSFEGYQDTLYVHSLRQFYRECEIYGTVDFIFGNAAVVFQGCKIYARKPLPNQKNA 828
Query: 385 IAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMSEMI 444
+ AQ RT PNQ +G S NC+I PD S +FLGRPWK +SRTV+++S++ +I
Sbjct: 829 VTAQGRTDPNQNTGISIQNCSIDAAPDLVADLNSTMSFLGRPWKVYSRTVYLQSYIGNVI 1008
Query: 445 HPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNNSQAMDFTVNQFIKG 504
P GWLEW T DTLF+GE+ N GPGS +NRV W GY +LN +QA +FTV F G
Sbjct: 1009QPAGWLEW-NGTVGLDTLFYGEFNNYGPGSNTSNRVTWPGYSLLNATQAWNFTVLNFTLG 1185
Query: 505 DLWLPSTGVSYNAGLL 520
+ WLP T + Y GLL
Sbjct: 1186NTWLPDTDIPYTEGLL 1233
>TC218158 similar to UP|Q7XAF8 (Q7XAF8) Papillar cell-specific pectin
methylesterase-like protein, partial (59%)
Length = 1291
Score = 335 bits (860), Expect = 2e-92
Identities = 168/316 (53%), Positives = 214/316 (67%), Gaps = 3/316 (0%)
Frame = +3
Query: 208 VVVAADGSGNYTTVMDAVKDAPEYNMTR---YVIHVKKGIYKEYVEIKKKKWNIMIVGDG 264
V V+ DGSGN+TT+ DA+ AP +++ ++I+V G+Y+E V I KKK +M+VGDG
Sbjct: 153 VTVSQDGSGNFTTINDAIAAAPNKSVSTDGYFLIYVTAGVYEENVSIDKKKTYLMMVGDG 332
Query: 265 MDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSDSDLS 324
++ T I+GNRS D TTF +AT AV GF+ ++T NTAG QAVALRS +DLS
Sbjct: 333 INKTIITGNRSVV-DGWTTFSSATLAVVGQGFVGVNMTIRNTAGAVKHQAVALRSGADLS 509
Query: 325 VFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNT 384
FY C +GYQD+LY HS RQFY EC I GTVDFI GNA VFQNC + P+ P+ Q N
Sbjct: 510 TFYSCSFEGYQDTLYVHSLRQFYSECDIYGTVDFIFGNAKVVFQNCKMYPRLPMSGQFNA 689
Query: 385 IAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMSEMI 444
I AQ RT PNQ +G S HNCTI D SNG + T+LGRPWK +SRTV+M++ M +I
Sbjct: 690 ITAQGRTDPNQDTGISIHNCTIRAADDLAASNG-VATYLGRPWKEYSRTVYMQTVMDSVI 866
Query: 445 HPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNNSQAMDFTVNQFIKG 504
H +GW EW+ + TL++ EY N GPGSG NRV W GYHV+N + A +FTV+ F+ G
Sbjct: 867 HAKGWREWDGDFAL-STLYYAEYSNSGPGSGTDNRVTWPGYHVINATDAANFTVSNFLLG 1043
Query: 505 DLWLPSTGVSYNAGLL 520
D WLP TGVSY L+
Sbjct: 1044DDWLPQTGVSYTNNLI 1091
>TC225094 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (47%)
Length = 919
Score = 329 bits (844), Expect = 2e-90
Identities = 163/253 (64%), Positives = 197/253 (77%), Gaps = 1/253 (0%)
Frame = +3
Query: 270 ISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSDSDLSVFYRC 329
ISGNRS D TTFR+ATFAVS GFIARDI+F+NTAGPE QAVALRSD+DLSVF+RC
Sbjct: 6 ISGNRSVV-DGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDTDLSVFFRC 182
Query: 330 GIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQS 389
GI GYQDSLY H+ RQF++EC I GTVD+I G+A AVFQNC ++ KK L +QKNTI A
Sbjct: 183 GIFGYQDSLYTHTMRQFFRECTITGTVDYIFGDATAVFQNCFLRVKKGLPNQKNTITAHG 362
Query: 390 RTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMSEMIHPEGW 449
R PN+ +GFSF C I D D P S Q++LGRPWK++SRTVFM+S+MSE+I EGW
Sbjct: 363 RKDPNEPTGFSFQFCNITADSDLVPWVSSTQSYLGRPWKSYSRTVFMQSYMSEVIRGEGW 542
Query: 450 LEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNNS-QAMDFTVNQFIKGDLWL 508
LEW N +TL++GEY N G G+G+ANRVKW GYH N+S QA +FTV QFI+G+LWL
Sbjct: 543 LEWNGNFAL-ETLYYGEYMNTGAGAGLANRVKWPGYHPFNDSNQASNFTVAQFIEGNLWL 719
Query: 509 PSTGVSYNAGLLV 521
PSTGV+Y AGL++
Sbjct: 720 PSTGVTYTAGLIL 758
>TC224917 similar to GB|AAK32841.1|13605696|AF361829 At2g45220/F4L23.27
{Arabidopsis thaliana;} , partial (69%)
Length = 1483
Score = 207 bits (526), Expect(2) = 2e-81
Identities = 126/268 (47%), Positives = 161/268 (60%), Gaps = 1/268 (0%)
Frame = +2
Query: 82 AISDCLELFDMAYENLKWSISATQNHQGNKNNGTGNLSSDLRTWISAVLSYQETCIDGFE 141
A +DCL+L++ + L +I N T +D +TW+S L+ ETC +GF
Sbjct: 398 AWADCLQLYEYTIQRLNKTI----------NPNTKCNQTDTQTWLSTALTNLETCKNGFY 547
Query: 142 GTNSNVKDHVSGGL-DQVISLVKNELLLQVVPDSDPSNISNSGEFPSWVKAEDEKLLQQD 200
V D+V + + V L+ N L L P G FP+WVK D KLLQ
Sbjct: 548 --ELGVPDYVLPLMSNNVTKLLSNTLSLNKGPYQYKPPSYKEG-FPTWVKPGDRKLLQSS 718
Query: 201 APPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVIHVKKGIYKEYVEIKKKKWNIMI 260
+ A+VVVA DGSG YTTV AV AP+ + RYVI+VK G+Y E VE+K NIM+
Sbjct: 719 SVASNANVVVAKDGSGKYTTVKAAVDAAPKSSSGRYVIYVKSGVYNEQVEVKGN--NIML 892
Query: 261 VGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSD 320
VGDG+ T I+G++S G TTFR+AT A GFIA+DITF NTAG N QAVA RS
Sbjct: 893 VGDGIGKTIITGSKSVG-GGTTTFRSATVAAVGDGFIAQDITFRNTAGAANHQAVAFRSG 1069
Query: 321 SDLSVFYRCGIKGYQDSLYAHSQRQFYK 348
SDLSVFYRC +G+QD+LY HS+RQFY+
Sbjct: 1070SDLSVFYRCSFEGFQDTLYVHSERQFYR 1153
Score = 114 bits (286), Expect(2) = 2e-81
Identities = 54/112 (48%), Positives = 74/112 (65%)
Frame = +3
Query: 348 KECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTII 407
+EC I GTVDFI GNAAAV QNC I + P + T+ AQ RT PNQ +G HN +
Sbjct: 1152 EECDIYGTVDFIFGNAAAVLQNCNIYARTP-PQRTITVTAQGRTDPNQNTGIIIHNSKVT 1328
Query: 408 PDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMSEMIHPEGWLEWETNTTYD 459
F PS S++++LGRPW+ +SRTVFM++++ +I+P GW+EW+ N D
Sbjct: 1329 GASGFNPS--SVKSYLGRPWQKYSRTVFMKTYLDSLINPAGWMEWDGNFALD 1478
>TC217842 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 precursor
(Pectin methylesterase) (PE) , partial (48%)
Length = 1225
Score = 298 bits (762), Expect = 5e-81
Identities = 141/274 (51%), Positives = 188/274 (68%)
Frame = +3
Query: 246 KEYVEIKKKKWNIMIVGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFEN 305
KE ++IK+ N+MIVGDGM T ++GN + D TTFR+ATFAV GFIARDITFEN
Sbjct: 6 KENIDIKRTVKNLMIVGDGMGATIVTGNHN-AIDGSTTFRSATFAVDGDGFIARDITFEN 182
Query: 306 TAGPENKQAVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAA 365
TAGP+ QAVALRS +D SVFYRC +GYQD+LY ++ RQFY++C I GTVDFI G+A A
Sbjct: 183 TAGPQKHQAVALRSGADHSVFYRCSFRGYQDTLYVYANRQFYRDCDIYGTVDFIFGDAVA 362
Query: 366 VFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGR 425
V QNC I +KP+ +Q+NT+ AQ RT PN+ +G HNC I D + GS +TFLGR
Sbjct: 363 VLQNCNIYVRKPMSNQQNTVTAQGRTDPNENTGIIIHNCRITAAGDLKAVQGSFRTFLGR 542
Query: 426 PWKNFSRTVFMESFMSEMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGY 485
PW+ +SRTV M+S + +I P GW W N TL++ E+ N G G+ RV W G+
Sbjct: 543 PWQKYSRTVVMKSALDGLISPAGWFPWSGNFAL-STLYYAEHANTGAGASTGGRVDWAGF 719
Query: 486 HVLNNSQAMDFTVNQFIKGDLWLPSTGVSYNAGL 519
V+++++A+ FTV F+ G W+P +GV ++ GL
Sbjct: 720 RVISSTEAVKFTVGNFLAGGSWIPGSGVPFDEGL 821
>TC217339 homologue to UP|Q8RVX1 (Q8RVX1) Pectin methylesterase precursor,
partial (48%)
Length = 923
Score = 285 bits (730), Expect = 3e-77
Identities = 139/268 (51%), Positives = 182/268 (67%), Gaps = 2/268 (0%)
Frame = +1
Query: 254 KKWNIMIVGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQ 313
+K N+M+VGDG D T I+GN ++ D TTF+TAT A GFIA+DI F+NTAGP+ Q
Sbjct: 1 EKTNVMLVGDGKDATVITGNLNF-IDGTTTFKTATVAAVGDGFIAQDIWFQNTAGPQKHQ 177
Query: 314 AVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQ 373
AVALR +D SV RC I +QD+LYAHS RQFY++ I GTVDFI GNAA VFQ C +
Sbjct: 178 AVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCDLV 357
Query: 374 PKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRT 433
+KP+ Q N + AQ R PNQ +G S C + P D +P GSI+TFLGRPWK +SRT
Sbjct: 358 ARKPMDKQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSIKTFLGRPWKKYSRT 537
Query: 434 VFMESFMSEMIHPEGWLEWETNT-TYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNN-S 491
V M+S + I P GW EW+ + + TL++GEY N GPG+G + RV W GYH++ +
Sbjct: 538 VVMQSTLDSHIDPTGWAEWDAQSKDFLQTLYYGEYMNNGPGAGTSKRVNWPGYHIIKTAA 717
Query: 492 QAMDFTVNQFIKGDLWLPSTGVSYNAGL 519
+A FTV Q I+G++WL +TGV++ GL
Sbjct: 718 EASKFTVAQLIQGNVWLKNTGVNFIEGL 801
>TC230039 homologue to UP|Q9M5J0 (Q9M5J0) Pectin methylesterase isoform alpha
(Fragment) , partial (70%)
Length = 913
Score = 262 bits (669), Expect = 3e-70
Identities = 136/299 (45%), Positives = 180/299 (59%)
Frame = +1
Query: 138 DGFEGTNSNVKDHVSGGLDQVISLVKNELLLQVVPDSDPSNISNSGEFPSWVKAEDEKLL 197
D FE + HVS L + L L + P FP+W+ +D KLL
Sbjct: 19 DRFEEGLLEISHHVSNSLAMLKKLPAGVKKLASKNEVFPGYGKIKDGFPTWLSTKDRKLL 198
Query: 198 QQDAPPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVIHVKKGIYKEYVEIKKKKWN 257
Q +++VA DG+GN+TT+ +AV AP + TR+VIH+K G Y E VE+ +KK N
Sbjct: 199 QAAVNETNFNLLVAKDGTGNFTTIAEAVAVAPNSSATRFVIHIKAGAYFENVEVIRKKTN 378
Query: 258 IMIVGDGMDVTTISGNRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVAL 317
+M VGDG+ T + +R+ D TTF++AT AV GFIA+ ITFEN+AGP QAVAL
Sbjct: 379 LMFVGDGIGKTVVKASRNVV-DGWTTFQSATVAVVGDGFIAKGITFENSAGPSKHQAVAL 555
Query: 318 RSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKP 377
RS SD S FY+C YQD+LY HS RQFY++C + GTVDFI GNAA V QNC + +KP
Sbjct: 556 RSGSDFSAFYKCSFVAYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAATVLQNCNLYARKP 735
Query: 378 LKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFM 436
++Q+N AQ R PNQ +G S NC + D P + +LGRPWK +SRTV++
Sbjct: 736 NENQRNLFTAQGREDPNQNTGISILNCKVAAAADLIPVKSQFKNYLGRPWKKYSRTVYL 912
>TC231406 similar to UP|Q9FF78 (Q9FF78) Pectinesterase, partial (35%)
Length = 851
Score = 260 bits (665), Expect = 9e-70
Identities = 124/241 (51%), Positives = 159/241 (65%)
Frame = +2
Query: 279 DNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSDSDLSVFYRCGIKGYQDSL 338
D TF TATFAV FIARD+ F NTAGP+ +QAVAL + +D +V+YRC I +QDSL
Sbjct: 8 DGTPTFSTATFAVFGRNFIARDMGFRNTAGPQKQQAVALMTSADQAVYYRCQIDAFQDSL 187
Query: 339 YAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSG 398
YAHS RQFY+EC I GTVDFI GN+A V QNC I P+ P++ Q+N I AQ +T PN +G
Sbjct: 188 YAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNIMPRVPMQGQQNPITAQGKTDPNMNTG 367
Query: 399 FSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMSEMIHPEGWLEWETNTTY 458
S NC I P D S++T+LGRPWKN+S VFM S M IHP GWL W N+
Sbjct: 368 ISIQNCNITPFGDL----SSVKTYLGRPWKNYSTPVFM*SPMGIFIHPNGWLPWVGNSA- 532
Query: 459 DDTLFFGEYQNKGPGSGVANRVKWRGYHVLNNSQAMDFTVNQFIKGDLWLPSTGVSYNAG 518
DT+F+ E+QN GPG+ NRV W+G V+ QA FTV F+ G+ W+ ++G + +
Sbjct: 533 PDTIFYAEFQNVGPGASTKNRVNWKGLRVITRKQASMFTVKAFLSGERWITASGAPFKSS 712
Query: 519 L 519
+
Sbjct: 713 I 715
>TC232911 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (34%)
Length = 843
Score = 254 bits (648), Expect = 8e-68
Identities = 144/268 (53%), Positives = 188/268 (69%), Gaps = 4/268 (1%)
Frame = +2
Query: 3 ISSTLTPTLILL---LIMSLQPCTTPSSASTITEFSGLSCLRVSPNRFIDSANKVINLLQ 59
I STLTPT+ L+ L++S CT+ S +T+ G L+V+P+ F + V+++LQ
Sbjct: 62 IVSTLTPTITLIFFFLVLSPSLCTSLGSTNTV----GSELLKVAPSEFEGTVRTVVDVLQ 229
Query: 60 NVSYNLSPFTKVNQDNDNRLSNAISDCLELFDMAYENLKWSISATQNHQGNKNNGTGNLS 119
V+ LS F + D+RLSNA+SDCL+L DM+ + L WS+SATQ+ +G K+N TGN S
Sbjct: 230 EVTSILSEFG--SGFGDSRLSNAVSDCLDLLDMSSDELDWSVSATQSPKG-KHNSTGNTS 400
Query: 120 SDLRTWISAVLSYQETCIDGFEGTNSNVKDHVSGGLDQVISLVKNELLLQVVPDSDPSNI 179
SDLRTW+SA L+ Q+TC+DGF+GTN VK VS GL QV+SL++ +LL QV P SD
Sbjct: 401 SDLRTWLSAALANQDTCMDGFDGTNGIVKGLVSTGLGQVMSLLQ-QLLTQVNPVSDHYTF 577
Query: 180 SN-SGEFPSWVKAEDEKLLQQDAPPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVI 238
S+ G FP WVK + KLLQ A D VVAADG+GN+T VMDAV AP Y+M RYVI
Sbjct: 578 SSPQGHFPPWVKPGERKLLQA-ANGVSFDAVVAADGTGNFTKVMDAVLAAPNYSMQRYVI 754
Query: 239 HVKKGIYKEYVEIKKKKWNIMIVGDGMD 266
H+K+G+Y E VEIKKKKWN+M+VGDGMD
Sbjct: 755 HIKRGVYNENVEIKKKKWNLMMVGDGMD 838
>CA851330 similar to PIR|T12995|T12 pectinesterase homolog T21L8.150 -
Arabidopsis thaliana, partial (37%)
Length = 700
Score = 246 bits (627), Expect = 2e-65
Identities = 127/228 (55%), Positives = 157/228 (68%), Gaps = 1/228 (0%)
Frame = +2
Query: 214 GSGNYTTVMDAVKDAPEYN-MTRYVIHVKKGIYKEYVEIKKKKWNIMIVGDGMDVTTISG 272
GSGN+ TV DA+ A + TR+VIHVKKG+Y+E +E+ NIM+VGDG+ T I+
Sbjct: 14 GSGNFKTVQDALNAAAKRKEKTRFVIHVKKGVYRENIEVALHNDNIMLVGDGLRNTIITS 193
Query: 273 NRSYGHDNITTFRTATFAVSAIGFIARDITFENTAGPENKQAVALRSDSDLSVFYRCGIK 332
RS D TT+ +AT + + FIARDITF+N+AG QAVALRS SDLSVFYRCGI
Sbjct: 194 ARSV-QDGYTTYSSATAGIDGLHFIARDITFQNSAGVHKGQAVALRSASDLSVFYRCGIM 370
Query: 333 GYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRTH 392
GYQD+L AH+QRQFY++C I GTVDFI GNAA VFQNC I ++PL+ Q N I AQ R
Sbjct: 371 GYQDTLMAHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCYIFARRPLEGQANMITAQGRGD 550
Query: 393 PNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFM 440
P Q +G S HN I PD +P TFLGRPW+ +SR V M++FM
Sbjct: 551 PFQNTGISIHNSQIRAAPDLKPVVDKYNTFLGRPWQQYSRVVVMKTFM 694
>TC211743 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 precursor
(Pectin methylesterase) (PE) , partial (39%)
Length = 601
Score = 239 bits (611), Expect = 2e-63
Identities = 118/205 (57%), Positives = 144/205 (69%), Gaps = 1/205 (0%)
Frame = +2
Query: 299 RDITFENTAGPENKQAVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDF 358
+DITF NTAG N QAVALRS SDLSVFYRC +GYQD+LY +S RQFY+EC I GTVDF
Sbjct: 2 QDITFRNTAGATNHQAVALRSGSDLSVFYRCSFEGYQDTLYVYSDRQFYRECDIYGTVDF 181
Query: 359 ICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGS 418
I GNAA VFQNC I + P ++ NTI AQ RT PNQ +G S HN + D
Sbjct: 182 IFGNAAVVFQNCNIYARNP-PNKVNTITAQGRTDPNQNTGISIHNSKVTAASDLM----G 346
Query: 419 IQTFLGRPWKNFSRTVFMESFMSEMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVAN 478
++T+LGRPW+ +SRTVFM++++ +I+PEGWLEW N TL++GEY N GPGS AN
Sbjct: 347 VRTYLGRPWQQYSRTVFMKTYLDSLINPEGWLEWSGNFAL-STLYYGEYMNTGPGSSTAN 523
Query: 479 RVKWRGYHVLNN-SQAMDFTVNQFI 502
RV W GYHV+ + S+A FTV FI
Sbjct: 524 RVNWLGYHVITSASEASKFTVGNFI 598
>TC220076 homologue to UP|PME3_PHAVU (Q43111) Pectinesterase 3 precursor
(Pectin methylesterase 3) (PE 3) , partial (39%)
Length = 808
Score = 234 bits (598), Expect = 5e-62
Identities = 119/233 (51%), Positives = 150/233 (64%), Gaps = 3/233 (1%)
Frame = +2
Query: 290 AVSAIGFIARDITFENTAGPENKQAVALRSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKE 349
AV GFIA+DI F N AG QAVA RS SD SVF+RC G+QD+LYAHS RQFY++
Sbjct: 80 AVKGKGFIAKDIGFVNNAGASKHQAVAFRSGSDRSVFFRCSFNGFQDTLYAHSNRQFYRD 259
Query: 350 CRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPD 409
C I GT+DFI GNAAAVFQNC I P++PL +Q NTI AQ + NQ +G II
Sbjct: 260 CDITGTIDFIFGNAAAVFQNCKIMPRQPLPNQFNTITAQGKKDRNQNTGI------IIQK 421
Query: 410 PDFQP--SNGSIQTFLGRPWKNFSRTVFMESFMSEMIHPEGWLEWETNTTYDDTLFFGEY 467
F P +N + T+LGRPWK+FS TV M+S + + P GW+ W N T+F+ EY
Sbjct: 422 SKFTPLENNLTAPTYLGRPWKDFSTTVIMQSDIGSFLKPVGWMSWVPNVEPVSTIFYAEY 601
Query: 468 QNKGPGSGVANRVKWRGYH-VLNNSQAMDFTVNQFIKGDLWLPSTGVSYNAGL 519
QN GPG+ V+ RVKW GY L + +A FTV FI+G WLP+ V +++ L
Sbjct: 602 QNTGPGADVSQRVKWAGYKPTLTDGEAGKFTVQSFIQGPEWLPNAAVQFDSTL 760
>CK606276
Length = 751
Score = 230 bits (586), Expect = 1e-60
Identities = 106/205 (51%), Positives = 142/205 (68%), Gaps = 3/205 (1%)
Frame = +1
Query: 318 RSDSDLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKP 377
R+ +D+S FY C +GYQD+LY HS RQFYK C I GTVDFI GNAAA+ Q+C + P+ P
Sbjct: 1 RNGADMSTFYNCSFEGYQDTLYVHSLRQFYKSCDIYGTVDFIFGNAAALLQDCNMYPRLP 180
Query: 378 LKDQKNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGS---IQTFLGRPWKNFSRTV 434
+++Q N I AQ RT PNQ +G S NC II D + + I+T+LGRPWK +SRTV
Sbjct: 181 MQNQFNAITAQGRTDPNQNTGISIQNCCIIAASDLGDATNNYNGIKTYLGRPWKEYSRTV 360
Query: 435 FMESFMSEMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNNSQAM 494
+M+SF+ +I P+GW EW + TL++ E+ N GPGS +NRV W GYH+++ A
Sbjct: 361 YMQSFIDGLIDPKGWNEWSGDFAL-STLYYAEFANWGPGSNTSNRVAWEGYHLIDEKDAD 537
Query: 495 DFTVNQFIKGDLWLPSTGVSYNAGL 519
DFTV++FI+G+ WLP TGV + AGL
Sbjct: 538 DFTVHKFIQGEKWLPQTGVPFXAGL 612
>TC210310 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 precursor
(Pectin methylesterase) (PE) , partial (38%)
Length = 678
Score = 229 bits (585), Expect = 2e-60
Identities = 108/199 (54%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Frame = +1
Query: 322 DLSVFYRCGIKGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQ 381
DLSVFY+C +GYQD+LY HS+RQFY+EC I GTVDFI GNAA V QNC I + P ++
Sbjct: 1 DLSVFYKCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAVVLQNCNIFARNP-PNK 177
Query: 382 KNTIAAQSRTHPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMS 441
NTI AQ RT PNQ +G S HN + D +P S++T+LGRPWK +SRTVFM++++
Sbjct: 178 VNTITAQGRTDPNQNTGISIHNSRVTAASDLRPVQNSVRTYLGRPWKQYSRTVFMKTYLD 357
Query: 442 EMIHPEGWLEWETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNN-SQAMDFTVNQ 500
+I+P GW+EW N DTL++GEY N GPGS A RVKW GY V+ + S+A F+V
Sbjct: 358 GLINPAGWMEWSGNFAL-DTLYYGEYMNTGPGSSTARRVKWSGYRVITSASEASKFSVAN 534
Query: 501 FIKGDLWLPSTGVSYNAGL 519
FI G+ WLPST V + L
Sbjct: 535 FIAGNAWLPSTKVPFTPSL 591
>TC225099 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (31%)
Length = 652
Score = 229 bits (583), Expect = 3e-60
Identities = 128/210 (60%), Positives = 152/210 (71%), Gaps = 3/210 (1%)
Frame = +2
Query: 134 ETCIDGFEGTNSNVKDHVSGGLDQVISLVKNELLLQVVPDSDP-SNISNSGEFPSWVKAE 192
+TC++G EGTNS VK S G+ QV+SLV+ +LL QVVP D + S+ G+FP WVK +
Sbjct: 8 DTCMEGLEGTNSIVKGSASAGIGQVVSLVE-QLLAQVVPAQDQFDDASSKGQFPLWVKPQ 184
Query: 193 DEKLLQQDAPPPPADVVVAADGSGNYTTVMDAVKDAPEYNMTRYVIHVKKGIYKEYVEIK 252
+ KLLQ ADV VA DGSGNY +MDAV AP+Y+M R+VI VKKG+Y E VEIK
Sbjct: 185 ERKLLQSIGMTA-ADVTVALDGSGNYAKIMDAVLAAPDYSMKRFVILVKKGVYVENVEIK 361
Query: 253 KKKWNIMIVGDGMDVTTISGNRS--YGHDNITTFRTATFAVSAIGFIARDITFENTAGPE 310
+KKWNIM+VG+GMD ISGN S YG TTFR+ATFAVS IGFIARDI F NT PE
Sbjct: 362 RKKWNIMMVGEGMDSIIISGNWSDVYGW---TTFRSATFAVSGIGFIARDIYFHNTEWPE 532
Query: 311 NKQAVALRSDSDLSVFYRCGIKGYQDSLYA 340
QA+ALRSD+DLSVFYRC I G D +YA
Sbjct: 533 KHQAMALRSDTDLSVFYRCEIVGDLDRIYA 622
>TC218157 similar to UP|Q8GUF8 (Q8GUF8) At2g47550/T30B22.15, partial (49%)
Length = 748
Score = 224 bits (570), Expect = 9e-59
Identities = 105/189 (55%), Positives = 129/189 (67%)
Frame = +1
Query: 332 KGYQDSLYAHSQRQFYKECRIRGTVDFICGNAAAVFQNCLIQPKKPLKDQKNTIAAQSRT 391
+GYQD+LY HS RQFY EC GTVDFI GNA VFQNC + P+ P+ Q N I AQ RT
Sbjct: 1 EGYQDTLYVHSLRQFYSECXXXGTVDFIFGNAKVVFQNCNMYPRLPMSGQFNAITAQGRT 180
Query: 392 HPNQTSGFSFHNCTIIPDPDFQPSNGSIQTFLGRPWKNFSRTVFMESFMSEMIHPEGWLE 451
PNQ +G S HN TI D SNG + T+LGRPWK +SRTV+M++FM +IH +GW E
Sbjct: 181 DPNQDTGISIHNSTIRAADDLASSNG-VATYLGRPWKEYSRTVYMQTFMDSVIHAKGWRE 357
Query: 452 WETNTTYDDTLFFGEYQNKGPGSGVANRVKWRGYHVLNNSQAMDFTVNQFIKGDLWLPST 511
W+ + TL++ EY N GPGSG NRV W GYHV+N + A +FTV+ F+ GD WLP T
Sbjct: 358 WDGDFAL-STLYYAEYSNSGPGSGTDNRVTWPGYHVINATDASNFTVSNFLLGDDWLPQT 534
Query: 512 GVSYNAGLL 520
GVSY L+
Sbjct: 535 GVSYTNNLI 561
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,640,639
Number of Sequences: 63676
Number of extensions: 361574
Number of successful extensions: 2101
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1983
length of query: 521
length of database: 12,639,632
effective HSP length: 102
effective length of query: 419
effective length of database: 6,144,680
effective search space: 2574620920
effective search space used: 2574620920
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0343.3