TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0336.2
         (88 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC215994 similar to UP|Q8L8H3 (Q8L8H3) Iron-stress related prote...   135  4e-33
TC215993 similar to UP|Q8L8H3 (Q8L8H3) Iron-stress related prote...   130  1e-31
TC215995 homologue to UP|Q8L8H3 (Q8L8H3) Iron-stress related pro...    38  0.001
TC226549 UP|Q84P43 (Q84P43) Protein kinase Pti1, complete              31  0.12
TC214383 similar to UP|Q8SA70 (Q8SA70) Transcription factor EIL2...    30  0.27
BI970317                                                               29  0.35
AW508334                                                               29  0.46
TC234169 similar to UP|Q8LEH1 (Q8LEH1) Ripening-related protein-...    28  0.79
TC225864 similar to UP|O03990 (O03990) RAD23, isoform I, partial...    28  0.79
TC211199 similar to UP|Q6Z1Z7 (Q6Z1Z7) PWWP domain protein-like,...    28  1.0
TC216193 wound-induced protein                                         28  1.0
TC206592                                                               27  1.3
TC205266 similar to UP|KTI1_SOYBN (P25272) Kunitz-type trypsin i...    27  1.3
TC217865                                                               27  1.3
TC222883 similar to UP|Q6NKR3 (Q6NKR3) At3g55600, partial (55%)        27  1.8
TC206318 similar to UP|Q9VDW1 (Q9VDW1) CG6240-PA, partial (6%)         27  1.8
BU761996 similar to GP|28301753|gb| auxin efflux carrier protein...    27  1.8
TC227192 similar to UP|Q6L8U3 (Q6L8U3) Auxin response factor 1, ...    27  1.8
TC203903 homologue to UP|Q94LX2 (Q94LX2) Beta-conglycinin alpha ...    27  2.3

>TC215994 similar to UP|Q8L8H3 (Q8L8H3) Iron-stress related protein, partial
           (16%)
          Length = 779

 Score =  135 bits (340), Expect = 4e-33
 Identities = 68/88 (77%), Positives = 76/88 (86%)
 Frame = +3

Query: 1   SDRLNRTNSIGNDLEKNQVASSRNVQVQDHIDAVSSILVNENHYSRFVALDGCSCSCSCS 60
           SDRL+RTNS+GNDLEKNQVASSR+V + DH DA SS L+NENHYSRF+AL+G      CS
Sbjct: 210 SDRLDRTNSVGNDLEKNQVASSRSVHIPDHEDAGSSNLLNENHYSRFIALEG------CS 371

Query: 61  CSAASQLLNDRWTAAIQSYNNSKDSSEK 88
           CSAA+QLLNDRWTAAIQSYNN KDSSEK
Sbjct: 372 CSAAAQLLNDRWTAAIQSYNNPKDSSEK 455


>TC215993 similar to UP|Q8L8H3 (Q8L8H3) Iron-stress related protein, partial
           (16%)
          Length = 830

 Score =  130 bits (326), Expect = 1e-31
 Identities = 66/88 (75%), Positives = 74/88 (84%)
 Frame = +3

Query: 1   SDRLNRTNSIGNDLEKNQVASSRNVQVQDHIDAVSSILVNENHYSRFVALDGCSCSCSCS 60
           SDRL+RTNSIGNDLEKNQVA SR+V + DH DA SS L+NENHYSR +AL+G      CS
Sbjct: 204 SDRLDRTNSIGNDLEKNQVAYSRSVHIPDHGDAGSSNLLNENHYSRLIALEG------CS 365

Query: 61  CSAASQLLNDRWTAAIQSYNNSKDSSEK 88
           CSAA+QLLNDRWTAA+QSYNN KDSSEK
Sbjct: 366 CSAAAQLLNDRWTAALQSYNNPKDSSEK 449


>TC215995 homologue to UP|Q8L8H3 (Q8L8H3) Iron-stress related protein,
           partial (12%)
          Length = 737

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +1

Query: 63  AASQLLNDRWTAAIQSYNNSKDSSEK 88
           +A++  +  WTAAIQSYNN KDSSEK
Sbjct: 157 SANRRKSSGWTAAIQSYNNPKDSSEK 234


>TC226549 UP|Q84P43 (Q84P43) Protein kinase Pti1, complete
          Length = 1627

 Score = 30.8 bits (68), Expect = 0.12
 Identities = 11/19 (57%), Positives = 13/19 (67%)
 Frame = +2

Query: 54   SCSCSCSCSAASQLLNDRW 72
            SCSCSCSCS   + +N  W
Sbjct: 1262 SCSCSCSCSRKLKQINSLW 1318



 Score = 24.6 bits (52), Expect = 8.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 53   CSCSCSCS 60
            CSCSCSCS
Sbjct: 1265 CSCSCSCS 1288


>TC214383 similar to UP|Q8SA70 (Q8SA70) Transcription factor EIL2, partial
           (18%)
          Length = 660

 Score = 29.6 bits (65), Expect = 0.27
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 53  CSCSCSCSCS 62
           CSCSCSCSCS
Sbjct: 319 CSCSCSCSCS 290



 Score = 25.0 bits (53), Expect = 6.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 55  CSCSCSCSAA 64
           CSCSCSCS +
Sbjct: 319 CSCSCSCSCS 290


>BI970317 
          Length = 560

 Score = 29.3 bits (64), Expect = 0.35
 Identities = 10/15 (66%), Positives = 11/15 (72%)
 Frame = +1

Query: 53 CSCSCSCSCSAASQL 67
          CSCSCSCSC   + L
Sbjct: 22 CSCSCSCSCQPRTSL 66



 Score = 26.2 bits (56), Expect = 3.0
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 54 SCSCSCSCS 62
          SCSCSCSCS
Sbjct: 19 SCSCSCSCS 45


>AW508334 
          Length = 459

 Score = 28.9 bits (63), Expect = 0.46
 Identities = 13/35 (37%), Positives = 21/35 (59%)
 Frame = -2

Query: 11  GNDLEKNQVASSRNVQVQDHIDAVSSILVNENHYS 45
           G +   NQ +S  +  VQ HID+V  +++ +NH S
Sbjct: 404 GRNFAANQTSSMAD*IVQPHIDSVPLLII*QNHLS 300


>TC234169 similar to UP|Q8LEH1 (Q8LEH1) Ripening-related protein-like,
           partial (11%)
          Length = 674

 Score = 28.1 bits (61), Expect = 0.79
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 44  YSRFVALDGCSCSCSCSC 61
           Y  FV  +G SC C C C
Sbjct: 166 YELFVGFEGISCGCGCRC 113


>TC225864 similar to UP|O03990 (O03990) RAD23, isoform I, partial (89%)
          Length = 1702

 Score = 28.1 bits (61), Expect = 0.79
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 53  CSCSCSCSC 61
           CSCSCSCSC
Sbjct: 499 CSCSCSCSC 525



 Score = 26.2 bits (56), Expect = 3.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 55  CSCSCSCSAASQLLNDRWTAAIQSY 79
           CSCSCSCS  +      W  A  SY
Sbjct: 499 CSCSCSCSCCN------WGTACISY 555


>TC211199 similar to UP|Q6Z1Z7 (Q6Z1Z7) PWWP domain protein-like, partial
           (8%)
          Length = 914

 Score = 27.7 bits (60), Expect = 1.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 44  YSRFVALDGCSCSCSC 59
           YSRF  ++G  CSC C
Sbjct: 587 YSRFAVVNGSGCSCGC 634


>TC216193 wound-induced protein
          Length = 741

 Score = 27.7 bits (60), Expect = 1.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 51  DGCSCSCSCSCSAASQLLNDRWTA 74
           D  +C CSCSC    Q L+ R TA
Sbjct: 468 DSHNCVCSCSCICHPQALSTRITA 397


>TC206592 
          Length = 1258

 Score = 27.3 bits (59), Expect = 1.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 53  CSCSCSCSCSA 63
           CSCSC C CSA
Sbjct: 642 CSCSCCCCCSA 610


>TC205266 similar to UP|KTI1_SOYBN (P25272) Kunitz-type trypsin inhibitor
           KTI1 precursor, partial (42%)
          Length = 1488

 Score = 27.3 bits (59), Expect = 1.3
 Identities = 14/36 (38%), Positives = 21/36 (57%)
 Frame = +2

Query: 35  SSILVNENHYSRFVALDGCSCSCSCSCSAASQLLND 70
           +++L N  H++   +    SCSCS SCS  S+ L D
Sbjct: 134 TTLLNNPKHHA---SSSSSSCSCSSSCSFRSERLLD 232


>TC217865 
          Length = 557

 Score = 27.3 bits (59), Expect = 1.3
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 26  QVQDHIDAV--SSILVNENHYSRFVALDGCSCSCSCSCSAASQLL 68
           +VQ +I+ +  S +L +  + +  V   G  C C C+CS  S LL
Sbjct: 227 EVQKNIEGLEDSLLLDHYGYIASSVLRPGSPCYCRCTCSFCSALL 361


>TC222883 similar to UP|Q6NKR3 (Q6NKR3) At3g55600, partial (55%)
          Length = 851

 Score = 26.9 bits (58), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (57%)
 Frame = -3

Query: 55  CSCSCSCSAASQLLNDRWTAAIQS 78
           C   C+C+ AS L+ D W+ +  S
Sbjct: 465 CFSMCACAVASSLIGDVWSVSASS 394


>TC206318 similar to UP|Q9VDW1 (Q9VDW1) CG6240-PA, partial (6%)
          Length = 711

 Score = 26.9 bits (58), Expect = 1.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 33  AVSSILVNENHYSRFVALDGCSCSCSCSCSAASQL 67
           A S +  + +  S    +  CSC CSCS S +S L
Sbjct: 326 AASMVYSDPSPSSSRRGVSSCSCFCSCSSSCSSGL 222


>BU761996 similar to GP|28301753|gb| auxin efflux carrier protein PIN1
          {Pisum sativum}, partial (15%)
          Length = 477

 Score = 26.9 bits (58), Expect = 1.8
 Identities = 9/11 (81%), Positives = 11/11 (99%)
 Frame = -3

Query: 54 SCSCSCSCSAA 64
          SCSCSCSCS++
Sbjct: 88 SCSCSCSCSSS 56



 Score = 25.8 bits (55), Expect = 3.9
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 53 CSCSCSCSCS 62
          CSCSCSCS S
Sbjct: 85 CSCSCSCSSS 56


>TC227192 similar to UP|Q6L8U3 (Q6L8U3) Auxin response factor 1, partial
           (14%)
          Length = 875

 Score = 26.9 bits (58), Expect = 1.8
 Identities = 13/43 (30%), Positives = 22/43 (50%), Gaps = 5/43 (11%)
 Frame = +1

Query: 44  YSRFVALDGCSCSCSCSCSAASQLLNDRWT-----AAIQSYNN 81
           YS+    +  +CSC  +CS++S + ND +        +  YNN
Sbjct: 124 YSKIPLSNNSTCSCYRNCSSSSSINNDYFPRLPHFCCLSFYNN 252


>TC203903 homologue to UP|Q94LX2 (Q94LX2) Beta-conglycinin alpha subunit,
           partial (31%)
          Length = 903

 Score = 26.6 bits (57), Expect = 2.3
 Identities = 11/19 (57%), Positives = 14/19 (72%)
 Frame = -3

Query: 46  RFVALDGCSCSCSCSCSAA 64
           RF +L G SCS  CSCS++
Sbjct: 412 RFSSLRGHSCSSLCSCSSS 356


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.311    0.121    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,186,790
Number of Sequences: 63676
Number of extensions: 63540
Number of successful extensions: 1129
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of query: 88
length of database: 12,639,632
effective HSP length: 64
effective length of query: 24
effective length of database: 8,564,368
effective search space: 205544832
effective search space used: 205544832
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.6 bits)