TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0331c.6
         (426 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC205464 weakly similar to GB|AAP42752.1|30984578|BT008739 At1g5...    42  7e-04
TC220039 similar to UP|Q9FZ10 (Q9FZ10) Serine threonine kinase h...    32  0.54
TC222432                                                               31  1.2
BI892693                                                               30  1.6
TC234316 weakly similar to UP|IE68_PRVKA (P24827) Immediate-earl...    30  2.7
TC205465 weakly similar to GB|AAP42752.1|30984578|BT008739 At1g5...    30  2.7
TC203856 homologue to GB|AAG40366.1|11762176|AF325014 At2g01140 ...    30  2.7
TC204197 homologue to UP|Q9SWS9 (Q9SWS9) Ribosomal protein S26, ...    29  3.5
TC203423 similar to GB|AAG40366.1|11762176|AF325014 At2g01140 {A...    29  3.5
TC213599 homologue to UP|EXBB_PASHA (P72202) Biopolymer transpor...    29  3.5
TC231475 similar to UP|Q8LFC0 (Q8LFC0) NAD+ dependent isocitrate...    29  4.6
TC204446 similar to UP|ATP4_IPOBA (Q40089) ATP synthase delta' c...    29  4.6
TC204642 similar to UP|ADK2_ARATH (Q9LZG0) Adenosine kinase 2  (...    29  4.6
TC227577 UP|PROC_SOYBN (P17817) Pyrroline-5-carboxylate reductas...    28  6.0
AW472011 similar to SP|P29530|OLE1 P24 oleosin isoform A (P89). ...    28  7.9

>TC205464 weakly similar to GB|AAP42752.1|30984578|BT008739 At1g57790
           {Arabidopsis thaliana;} , partial (17%)
          Length = 756

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 38/139 (27%), Positives = 57/139 (40%), Gaps = 4/139 (2%)
 Frame = +1

Query: 135 PWLLYVHNNLAIIRSILDPT--ETYSRSIPELSGANLLTVQHGGWCVLEKGGKEKVRELL 192
           PWL+Y            DP   +TYS  +PEL G+ +   +  GW +L    + +   + 
Sbjct: 313 PWLMYFPK-FGDWYEFYDPAHRKTYSIELPELRGSRVCYTK-DGWLLLY---RPRTHRVF 477

Query: 193 LWNPFLQEKIHLPSLKHENRIRNCILSCSPTETDQVCSIFLFPHEAYGYGPN--ILFYCE 250
            +NPF  E I LP  +   +I     SC+PT  D  C +    H      P    +  C 
Sbjct: 478 FFNPFTMEIIKLPRFEMSYQI--VAFSCAPTSPD--CVLVTGKH----VSPTGVAISTCY 633

Query: 251 VGDKQWFAVDYRKDLVRAS 269
            G  +W  + Y+  L   S
Sbjct: 634 PGATEWTTLSYQNRLAFVS 690


>TC220039 similar to UP|Q9FZ10 (Q9FZ10) Serine threonine kinase homolog
           COK-4, partial (27%)
          Length = 1636

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 18/67 (26%), Positives = 32/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 176 GWCV-LEKGGKEKVRELLLWNPFLQEKIHLPSLKHENRIRNCILSCSPTETDQVCSIFLF 234
           GW    ++   ++ ++LLL +         P  + EN + +CI+SC  T T     + LF
Sbjct: 830 GWITRCDQTKPKQYKKLLLSSVIGTISTTYPPWQQENLVPDCIISCISTRTPIYTIVLLF 651

Query: 235 PHEAYGY 241
           P + Y +
Sbjct: 650 PAKYYAF 630


>TC222432 
          Length = 951

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 237 EAYGYGPNILFYCEVGDKQWFA--VDYRKDLVRASPPEEDGVVYNPFLYSPVYFNGRLYA 294
           E +G+ P +  Y  + D    A  +D  ++L++  P + +G++ + FL++  YFN  L A
Sbjct: 194 EIFGFAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLRA 373

Query: 295 VSYSRLLVIIEKLE 308
               R+L  + K++
Sbjct: 374 ---ERVLKEVVKMD 406


>BI892693 
          Length = 422

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 102 VVDALAKLAVREGWDWKGQNKTECLLPPTTQSYPWLLYVHNNLAIIRSILD 152
           +++AL KL V +G            +PPT+ S+   LY+H ++ I   I+D
Sbjct: 261 IIEALGKLTVEQG------------IPPTSDSWVAKLYIHTHIYIYIYIVD 377


>TC234316 weakly similar to UP|IE68_PRVKA (P24827) Immediate-early protein
           RSP40, partial (6%)
          Length = 422

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 15/38 (39%), Positives = 19/38 (49%)
 Frame = +2

Query: 134 YPWLLYVHNNLAIIRSILDPTETYSRSIPELSGANLLT 171
           +P LL +HN +A    I  PT+T     P L G  L T
Sbjct: 146 FPQLLLIHNQIAQHGRICAPTQTNLTETPRLPGPQLQT 259


>TC205465 weakly similar to GB|AAP42752.1|30984578|BT008739 At1g57790
           {Arabidopsis thaliana;} , partial (15%)
          Length = 490

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 2/65 (3%)
 Frame = +3

Query: 135 PWLLYVHNNLAIIRSILDPT--ETYSRSIPELSGANLLTVQHGGWCVLEKGGKEKVRELL 192
           PWL+Y            DP   +TYS  +PELSG+ +   +  GW +L    + +   + 
Sbjct: 309 PWLMYFPK-FGDWYEFYDPVHRKTYSIELPELSGSRVCYTK-DGWLLLY---RPRTHRVF 473

Query: 193 LWNPF 197
            +NPF
Sbjct: 474 FFNPF 488


>TC203856 homologue to GB|AAG40366.1|11762176|AF325014 At2g01140 {Arabidopsis
           thaliana;} , partial (93%)
          Length = 1641

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 23/61 (37%), Positives = 29/61 (46%), Gaps = 2/61 (3%)
 Frame = +2

Query: 106 LAKLAVREGWDWKGQNKTECLLPPTTQSYPWLLYVHNNLA--IIRSILDPTETYSRSIPE 163
           L  L  +  W W+ Q+ T C LP  + + P LL V   LA  + RS L  T T S   P 
Sbjct: 95  LFTLKSKHPWPWRLQSSTPC-LPSGSPTIPSLLAVDPLLAESLFRSALLLTNTNSSKPPN 271

Query: 164 L 164
           L
Sbjct: 272 L 274


>TC204197 homologue to UP|Q9SWS9 (Q9SWS9) Ribosomal protein S26, partial
           (93%)
          Length = 1152

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = +1

Query: 162 PELSGANL-LTVQHGGWCVLEKGGKEKVRELLLWNPFLQEKIHLPSLKHENRIRNCILSC 220
           P L+G ++ L     G  ++ KG    V+ L+L     Q+ +  P  K +++    ++ C
Sbjct: 325 PALTGGSVTLHSDSSGAGMMHKGPVSLVKHLVL---LAQQHLSEPKNKSQDK---ALMLC 486

Query: 221 SPTET-DQVCSIFLFPHEAYG 240
            PT + +Q+C  F+F H+  G
Sbjct: 487 *PTIS*EQICCCFIFEHQFCG 549


>TC203423 similar to GB|AAG40366.1|11762176|AF325014 At2g01140 {Arabidopsis
           thaliana;} , partial (33%)
          Length = 607

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 115 WDWKG-QNKTECLLPPTTQSYPWLLYVHNNLA--IIRSILDPTETYSRSIP 162
           W W+  Q+ T CLLP  + + P LL V   LA  + RS L  T T S   P
Sbjct: 144 WPWQRLQSSTPCLLPSGSPTIPSLLAVDPLLAESLFRSALLLTNTNSSKPP 296


>TC213599 homologue to UP|EXBB_PASHA (P72202) Biopolymer transport exbB
           protein, partial (8%)
          Length = 825

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 16/52 (30%), Positives = 24/52 (45%)
 Frame = +3

Query: 3   GGGIRGDGGRWVSGFAMAQGAGDAFKSKLLALQKGLLHVWELGFRPVNCFVD 54
           GG +R   GRW + F    G   AF ++L     GL   W+ G + +   +D
Sbjct: 360 GGLLRDCHGRWAASFV*KLGNTSAFVAEL*GAYLGLSLAWDKGDKNLEVNID 515


>TC231475 similar to UP|Q8LFC0 (Q8LFC0) NAD+ dependent isocitrate
           dehydrogenase subunit 1, partial (24%)
          Length = 589

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 11/32 (34%), Positives = 18/32 (55%)
 Frame = -2

Query: 203 HLPSLKHENRIRNCILSCSPTETDQVCSIFLF 234
           H+ +  HE R  +C L+CS T   ++  +F F
Sbjct: 546 HMETTLHEPRNGHCFLACSGTNFTKISRVFFF 451


>TC204446 similar to UP|ATP4_IPOBA (Q40089) ATP synthase delta' chain,
           mitochondrial precursor  , partial (92%)
          Length = 954

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 14/22 (63%), Positives = 15/22 (67%)
 Frame = -3

Query: 4   GGIRGDGGRWVSGFAMAQGAGD 25
           GGIRG G R V G A A GAG+
Sbjct: 223 GGIRGGGRRHVGGEAAAGGAGE 158


>TC204642 similar to UP|ADK2_ARATH (Q9LZG0) Adenosine kinase 2  (AK 2)
           (Adenosine 5'-phosphotransferase 2) , partial (52%)
          Length = 873

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 197 FLQEKIHLPSLKHENRIRNCILSCSPTETDQVCSIFLFP 235
           F +E  HLP L + NRIR    +C P     VCS  L+P
Sbjct: 382 FHRELFHLPILSNTNRIRTLCDNCYPF----VCS*CLWP 278


>TC227577 UP|PROC_SOYBN (P17817) Pyrroline-5-carboxylate reductase  (P5CR)
           (P5C reductase) , complete
          Length = 1263

 Score = 28.5 bits (62), Expect = 6.0
 Identities = 15/69 (21%), Positives = 36/69 (51%)
 Frame = +1

Query: 62  VITNSDVQNYWHGAVILLIREVIARNLSVSVTPVPKEQKMVVDALAKLAVREGWDWKGQN 121
           V+  SDV       V+L ++  + +++   +TP+  + K++V   A   +++  +W G +
Sbjct: 382 VVRESDV-------VVLSVKPQLVKDVVSKLTPLLTKNKLLVSVAAGTKLKDLQEWAGND 540

Query: 122 KTECLLPPT 130
           +   ++P T
Sbjct: 541 RFIRVMPNT 567


>AW472011 similar to SP|P29530|OLE1 P24 oleosin isoform A (P89). [Soybean]
           {Glycine max}, partial (50%)
          Length = 418

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 296 SYSRLLVIIEKLEPPNGLQIHSADVYLPDPFPHT 329
           SY R   + +++    GLQ HSA V L DP  HT
Sbjct: 298 SYGRHQPVRDQVPDIRGLQAHSAGVLLLDPELHT 399


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.323    0.142    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,909,323
Number of Sequences: 63676
Number of extensions: 415058
Number of successful extensions: 2309
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of query: 426
length of database: 12,639,632
effective HSP length: 100
effective length of query: 326
effective length of database: 6,272,032
effective search space: 2044682432
effective search space used: 2044682432
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)