BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0331c.5
(837 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {... 51 2e-06
CO985160 50 3e-06
TC229926 similar to UP|Q93VB2 (Q93VB2) AT3g62770/F26K9_200, part... 49 7e-06
TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase ... 49 1e-05
TC225777 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 ... 45 2e-05
TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (... 47 3e-05
TC218421 similar to GB|AAQ65192.1|34365761|BT010569 At3g08670 {A... 47 5e-05
TC215397 weakly similar to UP|Q8S9J6 (Q8S9J6) AT5g10770/T30N20_4... 46 8e-05
TC203681 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 46 8e-05
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 45 1e-04
TC225864 similar to UP|O03990 (O03990) RAD23, isoform I, partial... 45 1e-04
TC225826 homologue to UP|PDX1_PHAVU (Q9FT25) Probable pyridoxin ... 45 1e-04
TC229268 similar to GB|BAB32889.1|13122296|AB047812 hin1 homolog... 45 2e-04
TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich prote... 45 2e-04
TC226467 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 44 2e-04
TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partia... 44 3e-04
TC219020 similar to UP|SRB7_SCHPO (O94376) RNA polymerase II med... 44 3e-04
TC215396 weakly similar to UP|Q8H9F4 (Q8H9F4) 41 kD chloroplast ... 44 4e-04
TC231237 weakly similar to GB|AAL69460.1|18491271|AY074644 At2g4... 44 4e-04
TC230349 weakly similar to UP|Q15287 (Q15287) RNA-binding protei... 43 5e-04
>TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {Arabidopsis
thaliana;} , partial (22%)
Length = 978
Score = 50.8 bits (120), Expect = 2e-06
Identities = 37/129 (28%), Positives = 52/129 (39%), Gaps = 6/129 (4%)
Frame = +1
Query: 386 PTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSN 445
P +VPA++P T T A + SS A + A+ S + + A K A
Sbjct: 64 PASVPANSPPT---TLAATSPSSGTPPAVTQAASPPTTSNPPTISQPPAIVAPKPAPV-- 228
Query: 446 TPVGEKEKENETPKSPSRQDAPPSPPSTHDASS------MPPPPHQGEKSCPGAATTSEA 499
TP K +PK+P+ Q PP PP ++ +PPPP P
Sbjct: 229 TPPAPKVAPASSPKAPTPQTPPPQPPKVSPVAAPTLPPPLPPPPVATPPPLPPPKIAPTP 408
Query: 500 AQIEQAPAP 508
A+ APAP
Sbjct: 409 AKTSPAPAP 435
>CO985160
Length = 777
Score = 50.4 bits (119), Expect = 3e-06
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = -1
Query: 333 AENQAESTKA---PKRRRLVKASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTV 389
A A +T A P A++ A TS+ A T++AP T ++ AAA ++
Sbjct: 756 AATNAATTSADAKPTAASSAVATTAAATSH--ATTATSSAPTTAATTSSAAAAAAATSSA 583
Query: 390 PASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVG 449
P + T+ A AA A SSA A AA+ + T + AA A A AAA++N
Sbjct: 582 PTTAATTSSAAAAAATTSSAAAAAATTSSAATAAATGPAA---AACAAATAAASANPATA 412
Query: 450 EKEKENETP 458
+ TP
Sbjct: 411 AATSTSTTP 385
Score = 40.8 bits (94), Expect = 0.002
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 10/160 (6%)
Frame = -1
Query: 296 LEDMNFTNAELLKARERRMARFSPKFNTEGDVKKRGGAENQAESTKAPKRRRLVKASSGA 355
+E TNA A + A S T A + A +T A +S+ A
Sbjct: 768 VESAAATNAATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAA------TTSSAAA 607
Query: 356 GTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVA---------AE 406
+ + PTTAA + A+ AAA + A+ ++ ATAA A
Sbjct: 606 AAAATSSAPTTAAT-----TSSAAAAAATTSSAAAAAATTSSAATAAATGPAAAACAAAT 442
Query: 407 SSAGATAASVGATTTNISRSSAAEKLA-GVNATKAAATSN 445
++A A A+ AT+T+ + ++ A A V AT AAA ++
Sbjct: 441 AAASANPATAAATSTSTTPTTTATAAASAVTATAAAAATD 322
Score = 37.4 bits (85), Expect = 0.028
Identities = 37/136 (27%), Positives = 56/136 (40%)
Frame = -1
Query: 379 SVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNAT 438
S AA TT + P A + A A +++ AT A+ A TT + SSAA
Sbjct: 762 SAAATNAATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAATTSSAA--------A 607
Query: 439 KAAATSNTPVGEKEKENETPKSPSRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAATTSE 498
AAATS+ P + + + A + +T A++ G + AA T+
Sbjct: 606 AAAATSSAPTTAATTSSAAAAAATTSSAAAAAATTSSAATAAA---TGPAAAACAAATA- 439
Query: 499 AAQIEQAPAPEVGSSS 514
AA A A +S+
Sbjct: 438 AASANPATAAATSTST 391
Score = 35.4 bits (80), Expect = 0.11
Identities = 26/99 (26%), Positives = 39/99 (39%)
Frame = -1
Query: 402 AVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSP 461
A ES+A AA+ A + SSA A + ATS+ P + +
Sbjct: 777 AAIVESAAATNAATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAATTSSAAAAAA 598
Query: 462 SRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAATTSEAA 500
+ AP + +T A++ + AATTS AA
Sbjct: 597 ATSSAPTTAATTSSAAAAAATT---SSAAAAAATTSSAA 490
Score = 31.6 bits (70), Expect = 1.5
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 375 VTEASVAAAI----EPTTVPASTPATAG-ATAAVAAESSAGATAASVGATTTNISRSSAA 429
V E VAAA+ E V A+ A AG AAVAAE A AA+ +
Sbjct: 389 VVEVEVAAAVAGFAEAAAVAAAQAAAAGPVAAAVAAEEVVAAAAAAEEVVAAAAAAEEVV 568
Query: 430 EKLAGVNATKAAATS 444
+ G AAA +
Sbjct: 569 AAVVGAEEVAAAAAA 613
Score = 30.8 bits (68), Expect = 2.6
Identities = 22/78 (28%), Positives = 36/78 (45%), Gaps = 3/78 (3%)
Frame = +2
Query: 363 QPTTAAAPKGKNVTEA---SVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASVGAT 419
QP+ AAA EA +V + V A+ A A A AA+++A A+ A
Sbjct: 317 QPSVAAAAAVAVTAEAAAVAVVVGVVEVEVAAAVAGFAEAAAVAAAQAAAAGPVAAAVAA 496
Query: 420 TTNISRSSAAEKLAGVNA 437
++ ++AAE++ A
Sbjct: 497 EEVVAAAAAAEEVVAAAA 550
>TC229926 similar to UP|Q93VB2 (Q93VB2) AT3g62770/F26K9_200, partial (46%)
Length = 829
Score = 49.3 bits (116), Expect = 7e-06
Identities = 45/163 (27%), Positives = 67/163 (40%), Gaps = 6/163 (3%)
Frame = +1
Query: 358 SNPGAQPTTAAAPKGKNV------TEASVAAAIEPTTVPASTPATAGATAAVAAESSAGA 411
SNP P T + + + + SV + +P P++ + S
Sbjct: 118 SNPTQPPNTKTFLQNQAIHSQ**CLKPSVPMSHPKPPIPTPPPSSTSPSIRTPGASPPPP 297
Query: 412 TAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQDAPPSPP 471
TAAS T T +RSSAA +A AA+ S+T + SPS APP P
Sbjct: 298 TAASASTTATPSARSSAA-----TSAPAAASASST------CSSAATSSPSSAAAPPPTP 444
Query: 472 STHDASSMPPPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSSS 514
+T +P G +CP A+ +S +A+ +A A SS
Sbjct: 445 AT-----LPTRS*SGTTTCPAASASSPSARRSRASASAATESS 558
Score = 35.4 bits (80), Expect = 0.11
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 8/138 (5%)
Frame = +1
Query: 351 ASSGAGTSNPGAQP--------TTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAA 402
+S+ PGA P +T A P ++ S AA ++ +S ++ ++AA
Sbjct: 247 SSTSPSIRTPGASPPPPTAASASTTATPSARSSAATSAPAAASASSTCSSAATSSPSSAA 426
Query: 403 VAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPS 462
+ A S TTT + S+++ A+ +AAT + + SP+
Sbjct: 427 APPPTPATLPTRS*SGTTTCPAASASSPSARRSRASASAATES-----------SSSSPT 573
Query: 463 RQDAPPSPPSTHDASSMP 480
R + SP S S P
Sbjct: 574 RSSSTTSPISKCCTKSRP 627
>TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase
(CBL-interacting protein kinase 4), partial (45%)
Length = 674
Score = 48.5 bits (114), Expect = 1e-05
Identities = 31/125 (24%), Positives = 57/125 (44%)
Frame = +3
Query: 390 PASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVG 449
P +T+ +T+ VAA SS + AA+ + + + S ++ L+ A+ A S T
Sbjct: 303 PPRPRSTSSSTSPVAASSSPSSPAAAASRSPSPAATSRSSSPLS---ASATAMASPTETS 473
Query: 450 EKEKENETPKSPSRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAATTSEAAQIEQAPAPE 509
+ TP + SR SPPS + ++++ P + P +++ +A P P
Sbjct: 474 SHRTSSSTPPATSRSPTSASPPSRNTSTTVSSTPPAARRPSPRQRSSAASATTAXKPTPG 653
Query: 510 VGSSS 514
+SS
Sbjct: 654 PAASS 668
Score = 36.6 bits (83), Expect = 0.047
Identities = 36/138 (26%), Positives = 58/138 (41%), Gaps = 9/138 (6%)
Frame = +3
Query: 386 PTTVPASTPATAGATAAVAAES--SAGATAASVGATTTNISRSSAAEKLAGVNATKAAAT 443
P + STP A T +++S S+ S ++T+ ++ SS+ ++ AAA
Sbjct: 225 PASCVRSTPCAASTTTPTSSKSTRSSPPRPRSTSSSTSPVAASSSP-------SSPAAAA 383
Query: 444 SNTPVGEKEKENETPKSPSRQD-APPSPPSTHDASSMPPP-----PHQGEKSCPGAATT- 496
S +P + +P S S A P+ S+H SS PP P +TT
Sbjct: 384 SRSPSPAATSRSSSPLSASATAMASPTETSSHRTSSSTPPATSRSPTSASPPSRNTSTTV 563
Query: 497 SEAAQIEQAPAPEVGSSS 514
S + P+P SS+
Sbjct: 564 SSTPPAARRPSPRQRSSA 617
Score = 30.4 bits (67), Expect = 3.4
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 13/137 (9%)
Frame = +3
Query: 355 AGTSNPGAQPTTAAAPKGKNVTEAS---VAAAIEPTT--VPASTPATAGATAAVAAESSA 409
A T+ P + +T ++P T +S VAA+ P++ AS + AT+ ++ SA
Sbjct: 258 ASTTTPTSSKSTRSSPPRPRSTSSSTSPVAASSSPSSPAAAASRSPSPAATSRSSSPLSA 437
Query: 410 GATAASVGATTTNISRSSAAEKLAGVNATKAA--------ATSNTPVGEKEKENETPKSP 461
ATA + T++ SS+ + T A+ S+TP + S
Sbjct: 438 SATAMASPTETSSHRTSSSTPPATSRSPTSASPPSRNTSTTVSSTPPAARRPSPRQRSSA 617
Query: 462 SRQDAPPSPPSTHDASS 478
+ P ASS
Sbjct: 618 ASATTAXKPTPGPAASS 668
>TC225777 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 protein
(Corresponding sequence ZK643.8), partial (7%)
Length = 762
Score = 44.7 bits (104), Expect(2) = 2e-05
Identities = 39/104 (37%), Positives = 49/104 (46%), Gaps = 9/104 (8%)
Frame = +2
Query: 352 SSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGA 411
S T N G Q TT KG N + +S AA T+ A+ TA A AA A ++A
Sbjct: 68 SRARSTGNYGPQCTT----KG*NTSTSSGAATTTATSAAAAAATTAAAAAATPAATTATP 235
Query: 412 TAASVGATTTNISR-----SSAA----EKLAGVNATKAAATSNT 446
+ + AT T+IS SSAA A V AT AAA + T
Sbjct: 236 STTTTAATATDISANISSISSAAVPPSPAFAAVPATAAAAATAT 367
Score = 34.7 bits (78), Expect = 0.18
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +2
Query: 357 TSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASV 416
+++ GA TTA + T A+ AAA T +TP+T TAA A + SA ++ S
Sbjct: 128 STSSGAATTTATSAAAAAATTAAAAAATPAATT--ATPSTT-TTAATATDISANISSISS 298
Query: 417 GATTTN-----ISRSSAAEKLAGVNATKAAATSNTP 447
A + + ++AA A A A T++ P
Sbjct: 299 AAVPPSPAFAAVPATAAAAATATATAIPAPGTASFP 406
Score = 33.9 bits (76), Expect = 0.31
Identities = 30/101 (29%), Positives = 42/101 (40%)
Frame = +2
Query: 412 TAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQDAPPSPP 471
+ +S ATTT S ++AA A A AAT+ TP + T + + D +
Sbjct: 128 STSSGAATTTATSAAAAAATTAAAAAATPAATTATP-------STTTTAATATDISANIS 286
Query: 472 STHDASSMPPPPHQGEKSCPGAATTSEAAQIEQAPAPEVGS 512
S A+ P P + AA T+ A I PAP S
Sbjct: 287 SISSAAVPPSPAFAAVPATAAAAATATATAI---PAPGTAS 400
Score = 32.3 bits (72), Expect = 0.89
Identities = 33/111 (29%), Positives = 48/111 (42%), Gaps = 5/111 (4%)
Frame = +2
Query: 309 ARERRMARFSPKFNTEG--DVKKRGGAENQAESTKAPKRRRLVKASS--GAGTSNPGAQP 364
+R R + P+ T+G G A A S A A++ A T+ P
Sbjct: 68 SRARSTGNYGPQCTTKG*NTSTSSGAATTTATSAAAAAATTAAAAAATPAATTATPSTTT 247
Query: 365 TTAAAPK-GKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAA 414
T A A N++ S +AA+ P+ A+ PATA A AA ++A A A
Sbjct: 248 TAATATDISANISSIS-SAAVPPSPAFAAVPATAAA----AATATATAIPA 385
Score = 22.7 bits (47), Expect(2) = 2e-05
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +3
Query: 463 RQDAPPSPPSTHDASSMPPPPHQ 485
+Q PP PP PP HQ
Sbjct: 342 QQQQPPQPPPQLFQHQAQPPSHQ 410
>TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1),
partial (3%)
Length = 784
Score = 47.4 bits (111), Expect = 3e-05
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 4/175 (2%)
Frame = +3
Query: 339 STKAPKRRRLVKASSGAGTSNPGAQPTTAAAPKGKNV---TEASVAAAIE-PTTVPASTP 394
S A KRR S A +++P T++ A K+ AS+ ++ P + P P
Sbjct: 225 SPSASKRRPTPSGPSSAASTSPKPTSTSSRAAPSKSPFTWPSASLGTSMSSPASPPPPAP 404
Query: 395 ATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKE 454
+ ++ AA + ++AA+ + TT S S + A ++SN
Sbjct: 405 NASTSSTTSAASPALASSAANTASATTAPSLPSIPSRTTPTTARSTPSSSNPT--SSTSP 578
Query: 455 NETPKSPSRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAATTSEAAQIEQAPAPE 509
TPK + + P+P S+ + S PP P + P A T + E+A P+
Sbjct: 579 TATPKRT--RVSSPTPSSSSTSRSSPPSPKE-----PTATVTVSHTRGEEANTPQ 722
Score = 33.9 bits (76), Expect = 0.31
Identities = 33/154 (21%), Positives = 57/154 (36%)
Frame = +3
Query: 368 AAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISRSS 427
A P ++ T A TT PA+ +++ ++ S T S S S
Sbjct: 54 APPPHRSQTPTRTTTATRRTTTSTLPPASPRSSSPPSSPPSPSTTPTSSAPGNAPHSSPS 233
Query: 428 AAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQDAPPSPPSTHDASSMPPPPHQGE 487
A+++ + +AA+++ KSP + S +S PPP
Sbjct: 234 ASKRRPTPSGPSSAASTSPKPTSTSSRAAPSKSPFTWPSASLGTSMSSPASPPPPAPNAS 413
Query: 488 KSCPGAATTSEAAQIEQAPAPEVGSSSYYNMLPN 521
S +TTS A+ + A S++ LP+
Sbjct: 414 TS----STTSAASPALASSAANTASATTAPSLPS 503
>TC218421 similar to GB|AAQ65192.1|34365761|BT010569 At3g08670 {Arabidopsis
thaliana;} , partial (46%)
Length = 1256
Score = 46.6 bits (109), Expect = 5e-05
Identities = 41/188 (21%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Frame = +1
Query: 333 AENQAESTKAPKRRRLVKASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPAS 392
+E ++++T AP RR L +++S + TS + P + +SV + T+
Sbjct: 154 SEGESQTTLAPPRRSLTRSTSTSKTSRLAVSQSENNNPASRPARSSSVTRSSISTSHSQY 333
Query: 393 TPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKE 452
+ ++ ++ +S+ A+ +S ++ I+RSS++ + + ++ A+ S+TP +
Sbjct: 334 SSYSSNRHSSSILNTSS-ASVSSYIRPSSPITRSSSSARPSTPSSRPTASRSSTPSKPRP 510
Query: 453 KENETP---KSPSRQDAPPSPPST--HDASSMPPPPHQGEKSCPGAAT---TSEAAQIEQ 504
+ PS Q + PS PS+ H +++ P +S +T S +
Sbjct: 511 VSTSSTAERNRPSSQGSRPSTPSSRPHIPANLHSPSASSTRSLSRPSTPTRRSSMPSLSP 690
Query: 505 APAPEVGS 512
+P+P +GS
Sbjct: 691 SPSPTIGS 714
Score = 39.3 bits (90), Expect = 0.007
Identities = 43/178 (24%), Positives = 73/178 (40%), Gaps = 20/178 (11%)
Frame = +1
Query: 348 LVKASSGAGTSNPGAQPTTAAAP---KGKNVTEASVAAAIEPTTVPASTPATAGATAAVA 404
+ ++SS A S P ++PT + + K + V+ +S A P++ S P+T + +
Sbjct: 421 ITRSSSSARPSTPSSRPTASRSSTPSKPRPVSTSSTAERNRPSS-QGSRPSTPSSRPHIP 597
Query: 405 AE--SSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPV---GEKEKENETPK 459
A S + ++ S+ +T RSS + T + TS V G P
Sbjct: 598 ANLHSPSASSTRSLSRPSTPTRRSSMPSLSPSPSPTIGSLTSAGRVSSNGRNSAPASRPS 777
Query: 460 SPSRQDAPP------------SPPSTHDASSMPPPPHQGEKSCPGAATTSEAAQIEQA 505
SPS + PP +PP+ +++P P +S PG T + QA
Sbjct: 778 SPSPRVRPPPQPIVPPDFPLETPPNLR--TTLPDRPVSAGRSRPGGVTMKTNSSETQA 945
>TC215397 weakly similar to UP|Q8S9J6 (Q8S9J6) AT5g10770/T30N20_40, partial
(76%)
Length = 1447
Score = 45.8 bits (107), Expect = 8e-05
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Frame = +1
Query: 384 IEPTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAE------KLAGVNA 437
I+ P TA +TA V ++ + A +AS T+ + SS+A A A
Sbjct: 322 IQDVPHPPRHAYTASSTATVPSQLATSAASASP*PPPTSSTTSSSAAARTTRASSAAPPA 501
Query: 438 TKAAATSNTPVGEKEKENETPKSPSRQDAPPSPPSTHDASSMPPPPHQGEKSCP 491
+ A+A + +P K N SP+ PP+PP+T S PPP S P
Sbjct: 502 SLASAATPSPSSNKLPPNTVKSSPTASPPPPAPPAT---SPSAPPPQAATSSTP 654
Score = 40.8 bits (94), Expect = 0.002
Identities = 41/163 (25%), Positives = 62/163 (37%), Gaps = 14/163 (8%)
Frame = +1
Query: 378 ASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNA 437
A+ AA+ P P S+ ++ A A SSA A+ A T + S + +
Sbjct: 394 ATSAASASP*PPPTSSTTSSSAAARTTRASSAAPPASLASAATPSPSSNKLPPNTVKSSP 573
Query: 438 TKAA------ATSNTPVGEKEKENETPKSPSRQDAPPS--------PPSTHDASSMPPPP 483
T + ATS + + + TP SP APPS P + ++ S PPP
Sbjct: 574 TASPPPPAPPATSPSAPPPQAATSSTPPSPPSPAAPPSTVSILLPSP*AVSNSQSPPPPS 753
Query: 484 HQGEKSCPGAATTSEAAQIEQAPAPEVGSSSYYNMLPNAIEPS 526
+S A + + Q AP+ + N P PS
Sbjct: 754 PPAVQSSTLAP*SPASPQPPTAPSDPPSVKACQNTPPPGNSPS 882
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/148 (23%), Positives = 61/148 (40%), Gaps = 2/148 (1%)
Frame = +1
Query: 337 AESTKAPKRRRLVKASSGAGTSN--PGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTP 394
+ +T + R +ASS A ++ A P+ ++ N ++S A+ P PA++P
Sbjct: 436 SSTTSSSAAARTTRASSAAPPASLASAATPSPSSNKLPPNTVKSSPTASPPPPAPPATSP 615
Query: 395 ATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKE 454
+ AA ++ + + A+ +T + + S A N+ S V
Sbjct: 616 SAPPPQAATSSTPPSPPSPAAPPSTVSILLPSP*AVS----NSQSPPPPSPPAVQSSTLA 783
Query: 455 NETPKSPSRQDAPPSPPSTHDASSMPPP 482
+P SP AP PPS + PPP
Sbjct: 784 P*SPASPQPPTAPSDPPSVKACQNTPPP 867
>TC203681 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (40%)
Length = 913
Score = 45.8 bits (107), Expect = 8e-05
Identities = 55/226 (24%), Positives = 83/226 (36%), Gaps = 14/226 (6%)
Frame = +3
Query: 353 SGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGAT 412
+ G +P A PTT+ AA P PA+ P+ + A VA+ +S+
Sbjct: 60 AAVGGQSPAASPTTSPP-----------AATTTPFASPATAPSKPKSPAPVASPTSSSPP 206
Query: 413 AASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQDAPPSPPS 472
A+S A T SS A A + P +P SPP+
Sbjct: 207 ASSPNAATATPPASSPTVASPPSKAAAPAPVATPPAATPPAATPPAATPPAVTPVSSPPA 386
Query: 473 THDASSMPPPPHQGEKSCPGAATTSEAAQIE-----QAPAPEVGSSSYYNMLPNAIEPSE 527
SS PP S P A T+ A + APAP+ + + A PS
Sbjct: 387 PVPVSS--PPAPVPVSSPPALAPTTPAPVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSP 560
Query: 528 FLLA----GLNRDAIEKEVLSRG----LNDTKEETLACLLRA-GCI 564
LL + ++ +S G +++ ET+ CL + GC+
Sbjct: 561 SLLGPPAPPVGAPGSSQDSMSPGPAVSEDESGAETIRCLKKVIGCL 698
Score = 40.0 bits (92), Expect = 0.004
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 8/145 (5%)
Frame = +3
Query: 351 ASSGAGTSNPGAQPTTAAAPKGKNVTEASVA---AAIEPT-TVPASTPATAGATAAVAAE 406
+S A T+ P A T A+P K A VA AA P T PA+TP ++ A
Sbjct: 210 SSPNAATATPPASSPTVASPPSKAAAPAPVATPPAATPPAATPPAATPPAVTPVSSPPAP 389
Query: 407 SSAGATAASVGATTTN-ISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQD 465
+ A V ++ ++ ++ A +A A A + +K K++ P
Sbjct: 390 VPVSSPPAPVPVSSPPALAPTTPAPVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSPSLL 569
Query: 466 APPSPPSTHDAS---SMPPPPHQGE 487
PP+PP S SM P P E
Sbjct: 570 GPPAPPVGAPGSSQDSMSPGPAVSE 644
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 45.4 bits (106), Expect = 1e-04
Identities = 41/173 (23%), Positives = 68/173 (38%), Gaps = 35/173 (20%)
Frame = +2
Query: 357 TSNPGAQPTTAAAPKGKNVTEA------SVAAAIEPT---TVPASTPATAGATAAVAAES 407
T++P P T A+P + + S AA P+ T+P P++ + + +++
Sbjct: 80 TTSPACWPHTPASPPSTTTSPSPTWPKRSTAARPSPSWPSTMPPCPPSSTSTSPSPPSKT 259
Query: 408 SAGATAASVGATTTNISRSSAAEKLAGVNATKAA------ATSNTPVGEKEKENETPK-- 459
S+ +T++S + + +RS+ A + + A ATS +P + PK
Sbjct: 260 SSPSTSSSTTSAPKSSTRSTTAPPSSPPCSRPPAPPPAPPATSTSPTSRPARSASPPKTT 439
Query: 460 ------------------SPSRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAA 494
SPS + APP P T PPPP CP A
Sbjct: 440 TAPSTPSTSNPSRKCPTTSPSSKSAPPLAPPTPRHPPPPPPPST*SPLCPNKA 598
>TC225864 similar to UP|O03990 (O03990) RAD23, isoform I, partial (89%)
Length = 1702
Score = 45.4 bits (106), Expect = 1e-04
Identities = 52/197 (26%), Positives = 77/197 (38%), Gaps = 13/197 (6%)
Frame = +2
Query: 331 GGAENQAESTKAPKRRRLVKASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAI-EPTTV 389
G + A STKAP+ + ++ A + P A AP ASV A I P+
Sbjct: 404 GSTTSTAPSTKAPQTSTVPASTPPASVVPQASAPAPAPAPAATGALPASVTAPISSPSPA 583
Query: 390 PASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAG--------VNATKAA 441
PA TPA + AV G A+++ A + + G V A +AA
Sbjct: 584 PAPTPAPISSGTAVEGSDIYGQAASNLVAGSNLEGTIQQILDMGGGSWDRDTVVRALRAA 763
Query: 442 ATSNTPVGEKEKENETPKSPSRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAATTS--EA 499
N P E+ E P + +AP + A PP + + P A T++ A
Sbjct: 764 --YNNP--ERAVEYLYTGIPEQAEAPLVARAPVSAQPTNPPADAPQTAQPAAVTSAGPNA 931
Query: 500 AQIEQAP--APEVGSSS 514
++ P P VGS +
Sbjct: 932 NPLDLFPQGLPNVGSGA 982
Score = 32.7 bits (73), Expect = 0.68
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +2
Query: 358 SNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASVG 417
S G TT+ AP T+A + + +T PAS A A A A ++ GA ASV
Sbjct: 389 SPSGEGSTTSTAPS----TKAPQTSTVPASTPPASVVPQASAPAPAPAPAATGALPASVT 556
Query: 418 ATTTNISRSSA 428
A ++ S + A
Sbjct: 557 APISSPSPAPA 589
>TC225826 homologue to UP|PDX1_PHAVU (Q9FT25) Probable pyridoxin biosynthesis
protein PDX1 (pvPDX1), partial (96%)
Length = 1482
Score = 45.1 bits (105), Expect = 1e-04
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 19/170 (11%)
Frame = +2
Query: 350 KASSGAGTSNPGAQPTTAAAPKGKN------VTEASVAAAIEPTTVPASTPATAGATAAV 403
+ SSG S +P +A + K ++ T ++ PTT ST T+ + ++V
Sbjct: 368 RTSSGPSPSPSWPRPASATSSKPRSSKPSASTTSTRARSSPSPTTPTTSTNTTSASPSSV 547
Query: 404 AAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSR 463
AA +SA +AAS A + R+ A + +A S +G T SPS
Sbjct: 548 AAATSARPSAASARAPP*SAPRARPAPATSS-RPFATSAPS*ATLGFSATWTTTRSSPSP 724
Query: 464 QDA-------------PPSPPSTHDASSMPPPPHQGEKSCPGAATTSEAA 500
+ + SP ST + PPPP C AAT S +A
Sbjct: 725 RTSLRLMTSSCRPSSLAASPLSTSPPAESPPPP-TPRS*CSSAATASSSA 871
Score = 33.5 bits (75), Expect = 0.40
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Frame = +2
Query: 351 ASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVP-ASTPATAGATAAVAAESSA 409
A++ + TS+ +P + P SV+ PT+VP A+ PA A T + + SS
Sbjct: 218 AAASSWTSSTRNRPASRRRPVPARSWPLSVSP---PTSVPRAAWPA*A--TRSSSRTSSG 382
Query: 410 GATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQDAPPS 469
+ + S + S + K + + A +S +P N T SPS A S
Sbjct: 383 PSPSPSWPRPASATSSKPRSSKPSASTTSTRARSSPSPTTPTTSTNTTSASPSSVAAATS 562
Query: 470 PPSTHDASSMPPPPHQGEKSCPGAATTS 497
+ A+S PP ++ P AT+S
Sbjct: 563 --ARPSAASARAPP*SAPRARPAPATSS 640
>TC229268 similar to GB|BAB32889.1|13122296|AB047812 hin1 homolog
{Arabidopsis thaliana;} , partial (31%)
Length = 1043
Score = 44.7 bits (104), Expect = 2e-04
Identities = 32/112 (28%), Positives = 54/112 (47%)
Frame = +3
Query: 386 PTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSN 445
PTT P + ATA A AA AA ++A +TA+ + ++ SS+ + A + + A T +
Sbjct: 144 PTTAPPAAAATAAAAAA*AASAAASSTAS*ASSARSSPQSSSS*QYSAFSSGSSCAPTCS 323
Query: 446 TPVGEKEKENETPKSPSRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAATTS 497
+ P PSR A +PP+T ++ P ++ A+TT+
Sbjct: 324 --------NSTLPTRPSR--ASTTPPTTLSTTTSPSTSRSATRTAGSASTTT 449
>TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich protein, partial
(20%)
Length = 1041
Score = 44.7 bits (104), Expect = 2e-04
Identities = 38/134 (28%), Positives = 55/134 (40%), Gaps = 3/134 (2%)
Frame = -2
Query: 378 ASVAAAIEPTTVPASTP-ATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVN 436
A+V + PTT+P +TP AT+ +++ A + AS T+T + S +A
Sbjct: 977 ATVPVKLPPTTLPPTTPTATSPSSSTPLAVTQPPTVVASPPTTSTPPTTSQPPANVA--- 807
Query: 437 ATKAAATSNTPVGEKEKENETPKSPSRQDAPPSPPSTHDAS--SMPPPPHQGEKSCPGAA 494
K A P K +PK+P Q P PP S +PPPP P
Sbjct: 806 -PKPAPVK--PSAPKVAPASSPKAPPPQIPIPQPPKPSPVSPPPLPPPPVASPPPLPPPK 636
Query: 495 TTSEAAQIEQAPAP 508
A+ +PAP
Sbjct: 635 IAPTPAKTPPSPAP 594
>TC226467 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (6%)
Length = 1017
Score = 44.3 bits (103), Expect = 2e-04
Identities = 42/155 (27%), Positives = 57/155 (36%), Gaps = 7/155 (4%)
Frame = +3
Query: 361 GAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASVGAT- 419
G P+ A AP + A A P T PA+T ++G AV + A+ +
Sbjct: 27 GQLPSNAQAP--------ATAPANSPPTTPAATSPSSGTPLAVTLPPTVVASPPTTSTPP 182
Query: 420 TTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQDAPPSPPSTHDASS- 478
TT+ + A K A V TP K +PK+P Q P PP +
Sbjct: 183 TTSQPPAIVAPKPAPV----------TPPAPKVAPASSPKAPPPQTPQPQPPKVSPVVTP 332
Query: 479 -----MPPPPHQGEKSCPGAATTSEAAQIEQAPAP 508
+PPPP P A+ APAP
Sbjct: 333 TSPPPIPPPPVSTPPPLPPPKIAPTPAKTPPAPAP 437
>TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partial (4%)
Length = 540
Score = 43.9 bits (102), Expect = 3e-04
Identities = 27/88 (30%), Positives = 43/88 (48%)
Frame = +1
Query: 357 TSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASV 416
T+ A TTAAA T +S AAA ++ + ++ TAA A ++A AT A+
Sbjct: 43 TATSSAVATTAAATSHAATTTSSAAAAAAASSAATAAATSSATTAATAPAAAASATPATA 222
Query: 417 GATTTNISRSSAAEKLAGVNATKAAATS 444
A +T+ + ++ A A A AA +
Sbjct: 223 AAASTSTTPTTTATAAASAVAATAATAA 306
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/82 (37%), Positives = 42/82 (50%)
Frame = +1
Query: 366 TAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISR 425
TA A T ++VA T+ A+T ++A AA AA SSA AA+ ATT +
Sbjct: 19 TAPADAKPTATSSAVATTAAATSHAATTTSSA---AAAAAASSAATAAATSSATTAATAP 189
Query: 426 SSAAEKLAGVNATKAAATSNTP 447
++AA A AA+TS TP
Sbjct: 190 AAAASATPATAA--AASTSTTP 249
Score = 38.5 bits (88), Expect = 0.012
Identities = 36/125 (28%), Positives = 50/125 (39%), Gaps = 12/125 (9%)
Frame = +1
Query: 333 AENQAESTKAPKRRRLVKASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPAS 392
A + A +T A +S A + + TAAA T ++ AA P ++
Sbjct: 46 ATSSAVATTAAATSHAATTTSSAAAAAAASSAATAAA------TSSATTAATAPAAAASA 207
Query: 393 TPATAGA--------TAAVAAESSAGATAASVGATTTNISRSSAAEK----LAGVNATKA 440
TPATA A T A AA S+ ATAA+ + SS + AG + T
Sbjct: 208 TPATAAAASTSTTPTTTATAAASAVAATAATAATDGWGRNGSSLWSRPWAVTAGFSGTSF 387
Query: 441 AATSN 445
SN
Sbjct: 388 ITRSN 402
Score = 37.7 bits (86), Expect = 0.021
Identities = 24/92 (26%), Positives = 44/92 (47%)
Frame = +1
Query: 353 SGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGAT 412
S A T+ A+PT ++ S AA ++ A+ A++ ATAA + ++ AT
Sbjct: 7 SAAATAPADAKPTATSSAVATTAAATSHAATTT-SSAAAAAAASSAATAAATSSATTAAT 183
Query: 413 AASVGATTTNISRSSAAEKLAGVNATKAAATS 444
A + A+ T + ++A+ AAA++
Sbjct: 184 APAAAASATPATAAAASTSTTPTTTATAAASA 279
Score = 35.0 bits (79), Expect = 0.14
Identities = 34/93 (36%), Positives = 43/93 (45%), Gaps = 6/93 (6%)
Frame = +1
Query: 392 STPATAGATAAVAAESSAGAT---AASVGATTTNISRSSAAEKLAGVNATKAAATSN--- 445
S ATA A A A SSA AT A S ATTT SSAA A +A AAATS+
Sbjct: 7 SAAATAPADAKPTATSSAVATTAAATSHAATTT----SSAAAAAAASSAATAAATSSATT 174
Query: 446 TPVGEKEKENETPKSPSRQDAPPSPPSTHDASS 478
+ TP + + +P +T A++
Sbjct: 175 AATAPAAAASATPATAAAASTSTTPTTTATAAA 273
Score = 31.2 bits (69), Expect = 2.0
Identities = 31/94 (32%), Positives = 38/94 (39%)
Frame = -2
Query: 353 SGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGAT 412
S A + A AA V E AAA+ + A AGA AAV AE A A
Sbjct: 311 SVAAVAAVAATAEAAAVAVVVGVVEVEAAAAV----AGVAEAAAAGAVAAVVAEEVAAAV 144
Query: 413 AASVGATTTNISRSSAAEKLAGVNATKAAATSNT 446
AA A ++AAE++ AAA T
Sbjct: 143 AAEEAAA------AAAAEEVVVAACEVAAAVVAT 60
>TC219020 similar to UP|SRB7_SCHPO (O94376) RNA polymerase II mediator
complex protein srb7, partial (14%)
Length = 1446
Score = 43.9 bits (102), Expect = 3e-04
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 32/271 (11%)
Frame = +2
Query: 568 AFEKFNAATVEAERL-------KAESAKHQEAAAAWEKRFDKLA---TQAGKDKVYADKM 617
A EKFN E + L + + AK E + + + F++ T + +
Sbjct: 527 AIEKFNNKDSEVQSLLEKIKILEEQIAKAGEQSTSLKNEFEESLSKLTSLESENEDLKRQ 706
Query: 618 IGTAGIKISEL--EDQLAL-----MKEEADELDASLQACKKEKEQAEKDLIARGEAL--- 667
I A K S+ E++L + +K + DEL+ SL EKE A ++L++ ++
Sbjct: 707 ILDAESKSSQSFSENELLVGTNIQLKTKIDELEESLNHALSEKEAAAQELVSHKNSITEL 886
Query: 668 ---------IAKESELAILRAELELVKKALAEQEKKSAESLALAKSDMEAVMQATSEEIK 718
I + +E L+ E +L ++AL +K +E+ ++ + +IK
Sbjct: 887 NDLQSKSSEIQRANEARTLKVESQL-QEALQRHTEKESET-----KELNEKLNTLEGQIK 1048
Query: 719 KATETHAEALATK---DAEIASQLAKIKRLEDELATEKAKATEAREQAADIALDNRERGF 775
E EA+AT AE+ L K+K LE + + K+ ++ A + +N +
Sbjct: 1049LFEEHAREAVATSGTHKAELEQSLIKLKHLEIVIEELQNKSLHHEKETAGLNEENSKLNQ 1228
Query: 776 YLAKDQAQHLYPNFDFSAIGVMKEITAEGLV 806
+A +++ SA V KE T + L+
Sbjct: 1229EIASYESKLSDLQEKLSAALVEKEETDKELL 1321
>TC215396 weakly similar to UP|Q8H9F4 (Q8H9F4) 41 kD chloroplast nucleoid DNA
binding protein (CND41), partial (69%)
Length = 1808
Score = 43.5 bits (101), Expect = 4e-04
Identities = 37/133 (27%), Positives = 58/133 (42%), Gaps = 11/133 (8%)
Frame = +1
Query: 387 TTVPASTP-ATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSN 445
+TV +P AT+ A+ + ++ T++SV A TT S L A+ A+A +
Sbjct: 703 STVTVRSPLATSAASGSP*PPPTSSTTSSSVAAKTTRAS-------LVAPPASSASAATP 861
Query: 446 TPVGEKEKENETPKSPSRQDAPPSPPSTHDASSMP------PPPHQGEKSCPGAATTSE- 498
+P K SP+ PP+PP+ ++ P PP + P A+TS
Sbjct: 862 SPSSNKPPPYIVKSSPTASPPPPAPPAASPSAPPPLPTSSTPPSPPSPAAPPSTASTSPA 1041
Query: 499 ---AAQIEQAPAP 508
AA Q+P P
Sbjct: 1042SPWAAPNSQSPPP 1080
Score = 39.3 bits (90), Expect = 0.007
Identities = 49/187 (26%), Positives = 72/187 (38%), Gaps = 14/187 (7%)
Frame = +1
Query: 343 PKRRRLVKASSGAGTSNPGAQPTTAAAP---KGKNVTEASVAAAIEPTTVPASTPATAGA 399
P ++ ASS +P A + +P + T +SVAA + T P + A
Sbjct: 673 PPQKHAYTASSTVTVRSPLATSAASGSP*PPPTSSTTSSSVAA--KTTRASLVAPPASSA 846
Query: 400 TAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNT------PVGEKEK 453
+AA + SS V ++ T S A A +A TS+T P
Sbjct: 847 SAATPSPSSNKPPPYIVKSSPT-ASPPPPAPPAASPSAPPPLPTSSTPPSPPSPAAPPST 1023
Query: 454 ENETPKSP-----SRQDAPPSPPSTHDASSMPPPPHQGEKSCPGAATTSEAAQIEQAPAP 508
+ +P SP S+ PPSPP+ ++ P P P +A S A P P
Sbjct: 1024ASTSPASPWAAPNSQSPPPPSPPAVQSSTPAP*SPASPPPPTPPSAPPSGKA-CPNTPPP 1200
Query: 509 EVGSSSY 515
G+S Y
Sbjct: 1201--GNSPY 1215
Score = 37.0 bits (84), Expect = 0.036
Identities = 33/152 (21%), Positives = 54/152 (34%)
Frame = +1
Query: 356 GTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPASTPATAGATAAVAAESSAGATAAS 415
G S P A VT S A + P P ++ +++VAA+++ + A
Sbjct: 652 GMSRDVQPPQKHAYTASSTVTVRSPLATSAASGSP*PPPTSSTTSSSVAAKTTRASLVAP 831
Query: 416 VGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEKEKENETPKSPSRQDAPPSPPSTHD 475
++ + + S ++ K + S P P PPSPPS
Sbjct: 832 PASSASAATPSPSSNKPPPYIVKSSPTASPPPPAPPAASPSAPPPLPTSSTPPSPPS--- 1002
Query: 476 ASSMPPPPHQGEKSCPGAATTSEAAQIEQAPA 507
+ PP + P AA S++ PA
Sbjct: 1003-PAAPPSTASTSPASPWAAPNSQSPPPPSPPA 1095
>TC231237 weakly similar to GB|AAL69460.1|18491271|AY074644
At2g41330/F13H10.12 {Arabidopsis thaliana;} , partial
(24%)
Length = 583
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/101 (31%), Positives = 51/101 (49%), Gaps = 4/101 (3%)
Frame = +2
Query: 351 ASSGAGTSNPGAQPTTAAAPKGKN--VTEASVAAAIEPTTVPASTPATAGATAAVAAESS 408
+SS + S A P+T AAP + + + +A P+T ++T +T + AA +
Sbjct: 161 SSSTSPPSASSAAPSTTAAPSDPSSAASASPSTSATSPSTTASATSSTPSSAAAATSPCR 340
Query: 409 AGATAASVGAT-TTNISRSSAAEKLAGVNATKAAA-TSNTP 447
++AAS A TT+ S + AA A NA++A T TP
Sbjct: 341 VSSSAASTSAAPTTSASSTRAASSTASSNASRAPT*TPATP 463
Score = 42.7 bits (99), Expect = 7e-04
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Frame = +2
Query: 335 NQAESTKAPKR--RRLVKASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPAS 392
++A S K P R R L +S+ +G+ P + P AP + + T+ P++
Sbjct: 8 SRASSKKNPNRPLRNLRLSSAASGSPPPCSAPGAPHAPPPPPHSRPASTRVSSSTSPPSA 187
Query: 393 TPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSNTPVGEK- 451
+ A TAA + SSA + + S AT S S+ A + ++ AAATS V
Sbjct: 188 SSAAPSTTAAPSDPSSAASASPSTSAT----SPSTTASATSSTPSSAAAATSPCRVSSSA 355
Query: 452 EKENETPKSPSRQDAPPSPPSTHDASSMP 480
+ P + + S ++ +AS P
Sbjct: 356 ASTSAAPTTSASSTRAASSTASSNASRAP 442
Score = 29.6 bits (65), Expect = 5.8
Identities = 26/112 (23%), Positives = 52/112 (46%)
Frame = +2
Query: 333 AENQAESTKAPKRRRLVKASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTTVPAS 392
++ + ++ +P +++ + TS+ + A +P + + AS +AA PTT +S
Sbjct: 221 SDPSSAASASPSTSATSPSTTASATSSTPSSAAAATSPCRVSSSAASTSAA--PTTSASS 394
Query: 393 TPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATS 444
T A SS ++ AS T T + + A++ L ++A +A S
Sbjct: 395 T----------RAASSTASSNASRAPT*TPATPAEASDSLCAMSAMEATKCS 520
>TC230349 weakly similar to UP|Q15287 (Q15287) RNA-binding protein S1,
serine-rich domain, partial (12%)
Length = 479
Score = 43.1 bits (100), Expect = 5e-04
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Frame = +2
Query: 386 PTTVPASTPATAGATAAVAAESSAGATAASVGATTTNISRSSAAEKLAGVNATKAAATSN 445
P+T P+ P+ SSA + AS +T+ S SS A +TK + +SN
Sbjct: 113 PSTSPSGPPSP----------SSAAPSRASPASTSP*ASTSSPPSTAASDASTKPSPSSN 262
Query: 446 TPVGEKEKENETPKSPSRQDAP--PSPPSTHDASSMPPPPHQGEKSCPGAATTSEAAQIE 503
KSP+ AP PSPPS SS P P + P ATT +
Sbjct: 263 A----------LSKSPTSNAAPITPSPPSPATCSSATPSPCSARSTDPSPATTKASRSRS 412
Query: 504 QAPAPEVGSS 513
+ A + +S
Sbjct: 413 KPSATPIPAS 442
Score = 36.2 bits (82), Expect = 0.062
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 339 STKAPKRRRLVKASSGAGTSNPGAQPTTAAAPKGKNVTEASVAAAIEPTT----VPASTP 394
S+ AP R S A TS+P P+TAA+ + +S A + PT+ + S P
Sbjct: 146 SSAAPSRASPASTSP*ASTSSP---PSTAASDASTKPSPSSNALSKSPTSNAAPITPSPP 316
Query: 395 ATAGATAAVAAESSAGATAASVGATTTNISRS 426
+ A ++A + SA +T S T + SRS
Sbjct: 317 SPATCSSATPSPCSARSTDPSPATTKASRSRS 412
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.310 0.126 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,008,190
Number of Sequences: 63676
Number of extensions: 523233
Number of successful extensions: 10204
Number of sequences better than 10.0: 624
Number of HSP's better than 10.0 without gapping: 5673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8267
length of query: 837
length of database: 12,639,632
effective HSP length: 105
effective length of query: 732
effective length of database: 5,953,652
effective search space: 4358073264
effective search space used: 4358073264
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0331c.5