TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0331c.2
         (1291 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CF922488                                                              201  2e-51
NP595172 polyprotein [Glycine max]                                    187  2e-47
NP395547 reverse transcriptase [Glycine max]                          158  2e-38
NP334778 reverse transcriptase [Glycine max]                          152  1e-36
NP395548 reverse transcriptase [Glycine max]                          145  9e-35
TC233837 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, part...   135  1e-31
BG725601 similar to PIR|H86337|H86 protein F5M15.26 [imported] -...   100  5e-21
TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotei...    80  4e-15
TC211067 similar to UP|Q9LQH2 (Q9LQH2) F15O4.13, partial (9%)          58  3e-12
BQ628592                                                               50  4e-12
BE802896                                                               65  3e-10
BG839293                                                               55  3e-07
CF922341                                                               50  8e-06
BI498328                                                               47  5e-05
BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvo...    46  9e-05
TC231868 similar to UP|Q93424 (Q93424) C. elegans GRL-23 protein...    44  4e-04
TC227244 similar to UP|Q941A9 (Q941A9) At1g26300/F28B23_4, parti...    44  6e-04
AW620463                                                               44  6e-04
TC233861 weakly similar to UP|Q41192 (Q41192) NaPRP3, partial (21%)    43  0.001
TC207742 similar to UP|Q9FYG0 (Q9FYG0) F1N21.15 (At1g67330), par...    42  0.001

>CF922488 
          Length = 741

 Score =  201 bits (511), Expect = 2e-51
 Identities = 108/245 (44%), Positives = 147/245 (59%)
 Frame = +3

Query: 844  VKKANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGNHQIRMHP 903
            V K +GK  MCVDY DLN A PKD +PLP I+ LVD  +     S MD +SG +QI++ P
Sbjct: 3    VLKEDGKV*MCVDYRDLN*ASPKDKFPLPHINVLVDNTTSFSQFSFMDGFSGYNQIKIAP 182

Query: 904  ADEDKTAFMTARANYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVR 963
             D +KT F+T    +CY+ M FGLKN GATYQR M  +F   + + +EVY+DDMIVKS  
Sbjct: 183  EDMEKTTFITLWGTFCYKAMSFGLKNVGATYQRAMVALF*DMMHKEIEVYMDDMIVKSRT 362

Query: 964  GLDHHQDLEEAFGEIRKHNMRLNPEKCYFGVQGGKFLGFMITSRGIEINPEKCKAIQQMK 1023
              +H  +L + F  +RK+ +RLNP KC F V+  K L F+ + RGIE++  K K I +M 
Sbjct: 363  EEEHLVNLRKLFRRLRKYRLRLNPAKCMFEVKSRKLLDFIDS*RGIEVDSNKVKVILEMA 542

Query: 1024 SPSNVKEVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLS 1083
             P   K+VQ   GR+  + RF+        P F  L KN   +W  +C  AF R+K+ L 
Sbjct: 543  KPHTEKQVQGFLGRLNYIVRFIS*LIATCEPLFILLCKNQFVKWDHDC*VAFERIKQCLI 722

Query: 1084 SPPIL 1088
            +P +L
Sbjct: 723  NPHVL 737


>NP595172 polyprotein [Glycine max]
          Length = 4659

 Score =  187 bits (476), Expect = 2e-47
 Identities = 116/379 (30%), Positives = 187/379 (48%)
 Frame = +1

Query: 790  HRLALNPSLKPVS*LRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVIVKKANG 849
            H + L     PV     R    +   +++ + ++L    I+    P  L  +++VKK +G
Sbjct: 1759 HAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSLP-ILLVKKKDG 1935

Query: 850  KWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGNHQIRMHPADEDKT 909
             WR C DY  LN    KDS+P+P++D L+D   G +  S +D  SG HQI + P D +KT
Sbjct: 1936 SWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQPEDREKT 2115

Query: 910  AFMTARANYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQ 969
            AF T   +Y +  MPFGL NA AT+Q LM+++F   + + + V+ DD+++ S    DH +
Sbjct: 2116 AFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLK 2295

Query: 970  DLEEAFGEIRKHNMRLNPEKCYFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVK 1029
             LE     +++H +     KC FG     +LG  ++  G+ +   K +A+    +P+NVK
Sbjct: 2296 HLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPNNVK 2475

Query: 1030 EVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILS 1089
            +++   G      RF+    + + P    L+K+ +F W  E E AFV+LK+ ++  P+LS
Sbjct: 2476 QLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKD-SFLWNNEAEAAFVKLKKAMTEAPVLS 2652

Query: 1090 KPIQGHPLHLYFAVSDGALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLV 1149
             P    P  L    S   + +V+ Q     H I YF S  L     +     +  LA+  
Sbjct: 2653 LPDFSQPFILETDASGIGVGAVLGQ---NGHPIAYF-SKKLAPRMQKQSAYTRELLAITE 2820

Query: 1150 TARRLRPYFQSFPVKVRTD 1168
               + R Y       +RTD
Sbjct: 2821 ALSKFRHYLLGNKFIIRTD 2877


>NP395547 reverse transcriptase [Glycine max]
          Length = 762

 Score =  158 bits (399), Expect = 2e-38
 Identities = 90/248 (36%), Positives = 129/248 (51%), Gaps = 18/248 (7%)
 Frame = +1

Query: 816  VQQEVDKLLAAEFIREVKYPTWLANVVIVKKANG------------------KWRMCVDY 857
            V++EV KLL A  I  +   +W++ V +V K  G                  +WRMC+DY
Sbjct: 1    VRKEVFKLLEAGLIYPISDSSWVSPVQVVPKKGGMTVVKNDRNELIPTRRVTRWRMCIDY 180

Query: 858  TDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGNHQIRMHPADEDKTAFMTARAN 917
              LN+A  KD YPLP +D ++   +       +D YSG +QI + P D++KTAF    + 
Sbjct: 181  RKLNEATRKDHYPLPFMDQMLKRLARQSFYRFLDGYSGYNQIAVDPQDQEKTAFTCPFSV 360

Query: 918  YCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGE 977
            + YR MPFGL NA  T+QR M  +F   V + +EV++DD         +   +LE+    
Sbjct: 361  FAYRRMPFGLCNASTTFQRCMMAIFDDMVEKCIEVFMDDFSFFGASFGNCLANLEKVLQR 540

Query: 978  IRKHNMRLNPEKCYFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGR 1037
              K N+ LN EKC+F VQ G  LG  I+ RGIE+  EK   I ++  P NVK +    G 
Sbjct: 541  CEKSNLVLNWEKCHFMVQEGIVLGHKISKRGIEVVKEKLDVIDKLPPPVNVKGIHSFLGH 720

Query: 1038 IAALSRFL 1045
            +    RF+
Sbjct: 721  VGFYRRFI 744


>NP334778 reverse transcriptase [Glycine max]
          Length = 431

 Score =  152 bits (383), Expect = 1e-36
 Identities = 71/143 (49%), Positives = 96/143 (66%)
 Frame = +3

Query: 852 RMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGNHQIRMHPADEDKTAF 911
           RMCVDY DLN+A PKD++PLP ID L+   +   L S MD +SG +QI+M P D +KT F
Sbjct: 3   RMCVDYRDLNRASPKDNFPLPHIDILMANMASFALFSFMDGFSGYNQIKMAPEDMEKTTF 182

Query: 912 MTARANYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDL 971
           +T    +CY+ M FGLKN GATY R M  +F   + + +E YVD+MI KS    +H  +L
Sbjct: 183 ITLWGTFCYKVMSFGLKNFGATYHRAMVALFQDMMHKEIEAYVDEMIAKSRMEEEHLVNL 362

Query: 972 EEAFGEIRKHNMRLNPEKCYFGV 994
           +  FG++RK+ +RLNP KC FG+
Sbjct: 363 QNLFGQLRKYRLRLNPRKCVFGL 431


>NP395548 reverse transcriptase [Glycine max]
          Length = 762

 Score =  145 bits (367), Expect = 9e-35
 Identities = 84/248 (33%), Positives = 132/248 (52%), Gaps = 18/248 (7%)
 Frame = +1

Query: 816  VQQEVDKLLAAEFIREVKYPTWLANVVIVKKANG------------------KWRMCVDY 857
            V++EV KLL    I  +    W++ V++V K  G                   W++C+DY
Sbjct: 1    VRKEVLKLLEVGLIYPISDSAWVSPVLVVSKKEGMTVIRNEKNDLIPTRTVTSWKLCIDY 180

Query: 858  TDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGNHQIRMHPADEDKTAFMTARAN 917
              LN+A  KD +PLP +D +++  +G+     +DAY G +QI + P D++K AF      
Sbjct: 181  RKLNEATRKDHFPLPFMDQMLERLAGHAYYCFLDAYFGYNQIVVDPKDQEKMAFTCPFGV 360

Query: 918  YCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGE 977
            + YR +PFGL NA  T+Q  M  +FA  V +++EV++DD  V         + LE     
Sbjct: 361  FAYRRIPFGLCNAPTTFQMCMLAIFADIVEKSIEVFMDDFSVFVPSLESCLKKLEMVLQR 540

Query: 978  IRKHNMRLNPEKCYFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGR 1037
              + N+ LN EKC+F V+ G  LG  I++RGIE++  K   I+++  PSNVK ++   G+
Sbjct: 541  CVETNLVLNWEKCHFMVREGIVLGHKISTRGIEVDQTKIDVIEKLPPPSNVKGIRSFLGQ 720

Query: 1038 IAALSRFL 1045
                 RF+
Sbjct: 721  ARFYRRFI 744


>TC233837 similar to UP|Q6WAY3 (Q6WAY3) Gag/pol polyprotein, partial (6%)
          Length = 402

 Score =  135 bits (340), Expect = 1e-31
 Identities = 66/132 (50%), Positives = 90/132 (68%)
 Frame = +2

Query: 888  SLMDAYSGNHQIRMHPADEDKTAFMTARANYCYRTMPFGLKNAGATYQRLMDRVFAGQVG 947
            S MD +SG +QI M   D +KT F+T    + YR M FGLKN GATYQR M  +F   + 
Sbjct: 5    SFMDGFSGYNQI*MAREDVEKTTFVTLWGTFSYRVMAFGLKNTGATYQRAMVALFHDMMH 184

Query: 948  RNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHNMRLNPEKCYFGVQGGKFLGFMITSR 1007
            + +EVYVDDMI KS    +H  +L + FG ++K+ ++LNP KC FGV+ GK LGF+++ +
Sbjct: 185  KEIEVYVDDMIAKSRTETEHLVNLCKLFGRLQKYQLKLNPTKCTFGVKSGKLLGFIVSQK 364

Query: 1008 GIEINPEKCKAI 1019
            GIEI+PEK KA+
Sbjct: 365  GIEIDPEKVKAL 400


>BG725601 similar to PIR|H86337|H86 protein F5M15.26 [imported] - Arabidopsis
           thaliana, partial (1%)
          Length = 285

 Score =  100 bits (248), Expect = 5e-21
 Identities = 48/91 (52%), Positives = 66/91 (71%)
 Frame = -3

Query: 790 HRLALNPSLKPVS*LRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVIVKKANG 849
           H+LA+   +K V+  +R++  ++ + V QEV KL  A FIR++ Y T L +VV+VKK NG
Sbjct: 277 HKLAICNDVKLVTQRKRKIREERCQTV*QEVVKLAIASFIRDINYST*LFSVVMVKKPNG 98

Query: 850 KWRMCVDYTDLNKACPKDSYPLPSIDSLVDG 880
           KWR+C DY DLN ACPKD+YPLP+ID + DG
Sbjct: 97  KWRICTDYIDLN*ACPKDAYPLPNIDHMTDG 5


>TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotein (Fragment),
            partial (8%)
          Length = 1320

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = +3

Query: 736  EETKALKFGD----RTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHR 791
            EET+ +  G     R +KIGT +T      L  LL +  D+FAWS +DMPG+  + + HR
Sbjct: 978  EETELVDLGSGSGKREVKIGTGITAPIREELIILLRDYQDIFAWSYQDMPGLSSDIVQHR 1157

Query: 792  LALNPSLKPVS*LRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVV 842
            L LNP   PV    RR+  +    +++EV K   A F+   +YP W+AN+V
Sbjct: 1158 LPLNPECSPVKQKLRRMKPETSLKIKEEVKK*FDAGFLAVARYPKWVANIV 1310


>TC211067 similar to UP|Q9LQH2 (Q9LQH2) F15O4.13, partial (9%)
          Length = 589

 Score = 57.8 bits (138), Expect(2) = 3e-12
 Identities = 43/162 (26%), Positives = 73/162 (44%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1027 NVKEVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPP 1086
            +V +++   G  +   RF+P     + P  + ++KN+AF W  + E+AF  LKE L+  P
Sbjct: 109  SVGDIRSFHGLASFYRRFVPNFSTVASPLNELVKKNMAFTWGEKQEQAFALLKEKLTKAP 288

Query: 1087 ILSKPIQGHPLHLYFAVSDGALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALA 1146
            +L+ P       L    S   + +V+LQ   G H I YF S  L  A + Y   +K   A
Sbjct: 289  VLALPDFSKTFELECDASGVGVRAVLLQ---GGHPIAYF-SEKLHSATLNYPTYDKELYA 456

Query: 1147 VLVTARRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAW 1187
            ++   +    +       + +D   L+ +  K  L+ R   W
Sbjct: 457  LIRAPQTWEHFLVCKEFVIHSDHQSLKYIRGKSKLNKRHAKW 582



 Score = 33.5 bits (75), Expect(2) = 3e-12
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +2

Query: 999  FLGFMITSRGIEINPEKCKAIQQMKSPSNVKEV 1031
            F GF++   G++++PEK KAIQ+   P  V E+
Sbjct: 23   FSGFVVGRNGVQMDPEKIKAIQEWPPP*KVWEI 121


>BQ628592 
          Length = 423

 Score = 50.4 bits (119), Expect(2) = 4e-12
 Identities = 23/71 (32%), Positives = 42/71 (58%), Gaps = 2/71 (2%)
 Frame = -1

Query: 1059 LRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDGALSSVMLQEIDG 1118
            L KN A  W +  +EAF ++K+ L++P +L  P+ G P  LY  + D ++  V++Q  D 
Sbjct: 423  LPKNQAILWNSNYQEAFEKIKQSLANPSVLMPPVTGRPFLLYMTMLDESMGCVLVQHDDS 244

Query: 1119 --EHRIVYFVS 1127
              + + +Y++S
Sbjct: 243  GKKEQAIYYLS 211



 Score = 40.4 bits (93), Expect(2) = 4e-12
 Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = -3

Query: 1134 EVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDL-PLRQVLQKPDLSGRLVAWSVELS 1192
            ++ Y  +E+    ++  + RLR Y  S    + + + P++ + +KP L+GR+  W V LS
Sbjct: 193  KMNYSMLERTCCTLVWASHRLRQYMLSHTTWLISKMDPVKYIFEKPALTGRIARWQVLLS 14

Query: 1193 EYSL 1196
            E+++
Sbjct: 13   EFNI 2


>BE802896 
          Length = 416

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 40/133 (30%), Positives = 60/133 (45%)
 Frame = -2

Query: 1036 GRIAALSRFLPKSGDRSFPFFKCLRKNVAFEWTAECEEAFVRLKELLSSPPILSKPIQGH 1095
            G      RF+      + P    L+K V F++  +C+ AF  LK  L + PI+  P    
Sbjct: 406  GHAGFYRRFIRDFRKVALPLSNLLQKEVEFDFNDKCK*AFDCLKRALITTPIIQAPDWTA 227

Query: 1096 PLHLYFAVSDGALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLR 1155
            P  L    S+ AL  V+ Q+ID   R++Y+ S TL  A+  Y   EK  LA++    +  
Sbjct: 226  PFELMCDASNYALGVVLAQKIDKLPRVIYYSSRTLDAAQANYTTTEKELLAIVFALEKFH 47

Query: 1156 PYFQSFPVKVRTD 1168
             Y     + V  D
Sbjct: 46   SYLLGTRIIVYID 8


>BG839293 
          Length = 781

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 26/58 (44%), Positives = 35/58 (59%)
 Frame = +1

Query: 744 GDRTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSLKPV 801
           G R +KIGT +T      L  LL +  D+FAWS +DMPG+  + + H+L LNP   PV
Sbjct: 550 GKREVKIGTGITAPIREELIILLKDYQDIFAWSYQDMPGLSSDIVQHQLPLNPECSPV 723


>CF922341 
          Length = 675

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 31/137 (22%), Positives = 62/137 (44%), Gaps = 4/137 (2%)
 Frame = +1

Query: 84  HLMRSIGNIQQRNEHLQAQLDFYRREQRDDGSREADSVAEFRPFSED----VESVAIPDN 139
           HL+ S  +   +N H+ A++   + +  ++G R  +   ++   + +    V ++  P  
Sbjct: 250 HLLHSTTS---KNPHVMAEMG--KLDHLEEGLRAIEGGEDYAFANLEELFLVPNIITPPK 414

Query: 140 MKTLVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKSTAMAWFTTLPRGSI 199
            K L  D Y G + PK+HL  +  KM   A  + +    F  +    A+ W+T L    +
Sbjct: 415 FKVLDFDKYKGTTCPKNHLKMYCQKMGAYAKDEELLIHSFQESLTGVAVTWYTNLEPSRV 594

Query: 200 SNFRDFSSKFLVQFSAN 216
            +++D    F+ Q+  N
Sbjct: 595 HSWKDLMVAFVRQYQYN 645


>BI498328 
          Length = 335

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 21/62 (33%), Positives = 34/62 (53%)
 Frame = +1

Query: 1227 QWTLFVDGSSNSSGSGAGVTLEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVK 1286
            +W +  DG+SN+ G G G  L  P +  +  + +  F  TNN AEYEA   G++ A +  
Sbjct: 148  KWIVCFDGASNALGHGVGAVLVSPDDQCIPFTARLGFDCTNNMAEYEACALGVQAAIDFD 327

Query: 1287 IR 1288
            ++
Sbjct: 328  VK 333


>BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
           nagariensis}, partial (25%)
          Length = 407

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 22/53 (41%), Positives = 24/53 (44%)
 Frame = -1

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAP 71
           PP  P  + L  P +T     P PPP PP PPPPPSP         P   P P
Sbjct: 260 PPLSPPSLXLSPP*KTPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPP 102



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = -3

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P   +   P   + +++P PPP PP PPPPP P         P   P P   P
Sbjct: 276 PPPPPPPPLPPLPXSLSPLKNPPPPPPPPPPPPPPPPPPPFPPPPPPPPPPPPPPPP 106



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 22/57 (38%), Positives = 23/57 (39%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P      SP+       P PPP PP PPPPP PS        P   P P   P
Sbjct: 361 PPPPPPPPPPPSPLPPPPPPXPPPPPPPP-PPPPPPPSPPPPXXSLPPKKPPPPPPP 194



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = -3

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPP--PPSPSQVGSLERSPENSPAPEQQP 75
           PP  P      SP        P PPP PP PPP  PP P  +  L+  P   P P   P
Sbjct: 354 PPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPLPPLPXSLSPLKNPPPPPPPPPPPP 178



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = -1

Query: 28  LDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           L  P   + + SP PPP PP PPPPP P         P   P P   P
Sbjct: 407 LPPPPPPSSLPSPPPPPPPPPPPPPPLPPPPPPPPXPPPPPPPPPPPP 264



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/57 (36%), Positives = 22/57 (37%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P       P+       P PPP PP PPPPPSP         P   P P   P
Sbjct: 196 PPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPP 26



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/57 (36%), Positives = 23/57 (39%)
 Frame = -3

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P      SP++      P PPP PP PPPPP P         P   P P   P
Sbjct: 261 PPPLPPLPXSLSPLKNPPPPPPPPPPPPPPPPPPPFPPPPPPPPPPPPPPPPPLPPP 91



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 20/58 (34%), Positives = 22/58 (37%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQPA 76
           PP  P       P +      P PPP PP PPPPP P         P   P P   P+
Sbjct: 262 PPPSPPPPXXSLPPKKPPPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPS 89



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 20/57 (35%), Positives = 21/57 (36%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P       P     +    PPP PP PPPPP P     L   P   P P   P
Sbjct: 283 PPPPPPPPPPSPPPPXXSLPPKKPPPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPP 113



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/57 (36%), Positives = 22/57 (37%)
 Frame = -3

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P       P        P PPP PP PPPPP P        SP  +P P   P
Sbjct: 363 PPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPLPPLPXSLSPLKNPPPPPPP 193



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 19/37 (51%), Positives = 19/37 (51%)
 Frame = -2

Query: 39  SPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           SP PPP PP PPPPP PS    L   P   P P   P
Sbjct: 379 SPPPPPPPPPPPPPPPPS---PLPPPPPPXPPPPPPP 278



 Score = 40.0 bits (92), Expect = 0.007
 Identities = 23/65 (35%), Positives = 24/65 (36%)
 Frame = -1

Query: 11  SPMRQRISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPA 70
           SP  +   PP  P       P        P PPP PP PPPPPSP         P   P 
Sbjct: 230 SPP*KTPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPSPPLPPPPPPPPPPPPP 51

Query: 71  PEQQP 75
           P   P
Sbjct: 50  PPPPP 36



 Score = 40.0 bits (92), Expect = 0.007
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 40  PSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQ 73
           P PPPSPP+PPPPP P         P   P P Q
Sbjct: 116 PPPPPSPPLPPPPPPPPPPPPPPPPPPPPPPPGQ 15



 Score = 38.5 bits (88), Expect = 0.019
 Identities = 17/39 (43%), Positives = 18/39 (45%)
 Frame = -1

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQ 57
           PP  P       P+       P PPP PP PPPPP P Q
Sbjct: 131 PPPPPPPPPPSPPLPPPPPPPPPPPPPPPPPPPPPPPGQ 15



 Score = 37.7 bits (86), Expect = 0.033
 Identities = 22/62 (35%), Positives = 25/62 (39%)
 Frame = -1

Query: 17  ISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQPA 76
           + PP  P    L SP        P PPP PP PPPPP P         P   P P   P 
Sbjct: 407 LPPPPPPSS--LPSPPPPPPPPPPPPPPLPPPPPPPPXPP-------PPPPPPPPPPPPP 255

Query: 77  VT 78
           ++
Sbjct: 254 LS 249



 Score = 37.4 bits (85), Expect = 0.043
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -1

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSP 65
           PP  P       P  +  +  P PPP PP PPPPP P      + SP
Sbjct: 146 PPPPPPPPPPPPPPPSPPLPPPPPPPPPPPPPPPPPPPPPPPGQTSP 6



 Score = 37.0 bits (84), Expect = 0.056
 Identities = 19/53 (35%), Positives = 20/53 (36%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAP 71
           PP  P  +    P        P PPP PP PPPPP P         P   P P
Sbjct: 178 PPPPPPPLPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPP 20



 Score = 36.2 bits (82), Expect = 0.096
 Identities = 22/64 (34%), Positives = 27/64 (41%)
 Frame = -2

Query: 12  PMRQRISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAP 71
           P+    SPP  P       P   + +  P PP  PP PPPPP P    S    P  S  P
Sbjct: 397 PLLPPPSPPPPPPPPPPPPPPPPSPLPPPPPPXPPPPPPPPPPPPPPPS-PPPPXXSLPP 221

Query: 72  EQQP 75
           ++ P
Sbjct: 220 KKPP 209



 Score = 35.8 bits (81), Expect = 0.13
 Identities = 19/53 (35%), Positives = 19/53 (35%)
 Frame = -3

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAP 71
           PP  P       P        P PPP PP PPPPP P         P   P P
Sbjct: 180 PPPPPPPPFPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPPPPPP 22



 Score = 35.8 bits (81), Expect = 0.13
 Identities = 19/57 (33%), Positives = 21/57 (36%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P   +   P        P PPP PP  PPPP P         P   P P  +P
Sbjct: 181 PPPPPPPPLPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPGKP 11



 Score = 35.8 bits (81), Expect = 0.13
 Identities = 18/57 (31%), Positives = 21/57 (36%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P   +   P        P PPP PP P PPP    +   +  P   P P   P
Sbjct: 346 PPPPPPSPLPPPPPPXPPPPPPPPPPPPPPPSPPPPXXSLPPKKPPPPPPPPPPPPP 176



 Score = 35.4 bits (80), Expect = 0.16
 Identities = 19/57 (33%), Positives = 20/57 (34%)
 Frame = -2

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           PP  P  +    P        P PPP PP  PPPP  S        P   P P   P
Sbjct: 343 PPPPPSPLPPPPPPXPPPPPPPPPPPPPPPSPPPPXXSLPPKKPPPPPPPPPPPPPP 173



 Score = 33.9 bits (76), Expect = 0.48
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -2

Query: 40  PSPPPSPPVPPPPPSPSQVGSLERSPENSPAP 71
           P P P PP PPPPP P         P   P P
Sbjct: 100 PPPSPPPPPPPPPPPPPPPPPPPPPPPGKPLP 5



 Score = 30.8 bits (68), Expect = 4.0
 Identities = 21/73 (28%), Positives = 22/73 (29%), Gaps = 16/73 (21%)
 Frame = -1

Query: 19  PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPP----------------PPPSPSQVGSLE 62
           PP  P    L  P        P PPP PP PP                PPP P       
Sbjct: 356 PPPPPPPPPLPPPPPPPPXPPPPPPPPPPPPPPPLSPPSLXLSPP*KTPPPPPPPPPPPP 177

Query: 63  RSPENSPAPEQQP 75
             P   P+P   P
Sbjct: 176 PPPPPPPSPPPPP 138


>TC231868 similar to UP|Q93424 (Q93424) C. elegans GRL-23 protein
           (Corresponding sequence E02A10.2), partial (23%)
          Length = 790

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 16/83 (19%)
 Frame = -3

Query: 9   HHSPMRQRISPPRQPHRVVLDSPVRTTGVQSPSPPPSP----------------PVPPPP 52
           H   +R    PP QP + +L +       Q P PPP P                P P PP
Sbjct: 482 HLLSIRSPPQPPPQPPQPLLSNLFPHPPPQPPQPPPQPPPQPAPQPPLLIKFPQPPPQPP 303

Query: 53  PSPSQVGSLERSPENSPAPEQQP 75
           P P Q   L + P+  P PE QP
Sbjct: 302 PQPPQPPPLIKFPQPPPQPEPQP 234



 Score = 38.1 bits (87), Expect = 0.025
 Identities = 25/79 (31%), Positives = 32/79 (39%), Gaps = 13/79 (16%)
 Frame = -3

Query: 10  HSPMRQRISPPRQPHRVVLDSPVRTTGVQSP-SPPPSPPVPPP-------PPSPSQVGSL 61
           H P +    PP+ P +     P+     Q P  PPP PP PPP       PP P     L
Sbjct: 407 HPPPQPPQPPPQPPPQPAPQPPLLIKFPQPPPQPPPQPPQPPPLIKFPQPPPQPEPQPPL 228

Query: 62  -----ERSPENSPAPEQQP 75
                +  P+ +P P Q P
Sbjct: 227 LIIFPQPPPQPAPQPPQPP 171



 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -3

Query: 24  HRVVLDSPVRTTGVQSPSPPPSPPVPPP-PPSPSQVGSLERSPENSPAPEQQP 75
           H     S ++ + +       SPP PPP PP P         P   P P  QP
Sbjct: 527 HETYFSSSLKCSSIPHLLSIRSPPQPPPQPPQPLLSNLFPHPPPQPPQPPPQP 369


>TC227244 similar to UP|Q941A9 (Q941A9) At1g26300/F28B23_4, partial (67%)
          Length = 1408

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 26/75 (34%), Positives = 34/75 (44%), Gaps = 15/75 (20%)
 Frame = +1

Query: 12  PMRQRISPPRQPHRVVLDSPVR----TTGVQSPSP-----------PPSPPVPPPPPSPS 56
           P  +R SPP+ P R    +P R    T    SP+P           PP PP+P PPP P 
Sbjct: 220 PRNRRSSPPKPPRRPTSSNPPRSARPTRSSPSPTPSPFLPNSPPLPPPPPPLPLPPPPPP 399

Query: 57  QVGSLERSPENSPAP 71
           +     RS  +S +P
Sbjct: 400 RPLRRRRSSRSSASP 444



 Score = 36.6 bits (83), Expect = 0.074
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = +1

Query: 20  PRQPHRVVLDSPVRTTG--VQSPSPP----PSPPVPPPPPSPSQVGSLERSPENSPAPEQ 73
           P++P R    SP+   G  + SP PP     SPP PP  P+ S      R   +SP+P  
Sbjct: 145 PKRPRRNPNPSPLPPPGSPISSPKPPRNRRSSPPKPPRRPTSSNPPRSARPTRSSPSPTP 324

Query: 74  QP 75
            P
Sbjct: 325 SP 330


>AW620463 
          Length = 398

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 18  SPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPE--NSPAPEQQP 75
           +PP         S   +T    P P P PP+PPPPP PS   S   SP   ++P+P   P
Sbjct: 159 NPPSSHGSATPASSKSSTTAPPPPPQPPPPLPPPPPPPSSPAS*PSSPSSPSTPSPSSPP 338



 Score = 32.3 bits (72), Expect = 1.4
 Identities = 18/44 (40%), Positives = 22/44 (49%), Gaps = 4/44 (9%)
 Frame = +3

Query: 17  ISPPRQPHRVVLDSPVRTTGVQSPSP--PP--SPPVPPPPPSPS 56
           + PP  P       P   +   +PSP  PP  SPP PPP P+PS
Sbjct: 249 LPPPPPPPSSPAS*PSSPSSPSTPSPSSPPMTSPPTPPPGPAPS 380


>TC233861 weakly similar to UP|Q41192 (Q41192) NaPRP3, partial (21%)
          Length = 438

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 23/66 (34%), Positives = 30/66 (44%)
 Frame = +2

Query: 18  SPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQPAV 77
           SPP++P      SP   +  + PS PPSPP PPPPP P    S   S  ++         
Sbjct: 65  SPPQRPWNWTSTSP-SASS*RKPSRPPSPPSPPPPPPPPPRSSNNPSSSSTMTTSTP*RC 241

Query: 78  TQEQWR 83
           +   WR
Sbjct: 242 SARSWR 259


>TC207742 similar to UP|Q9FYG0 (Q9FYG0) F1N21.15 (At1g67330), partial (70%)
          Length = 1115

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -2

Query: 18  SPPRQPHRVVLDSPVRTTGVQSPSPPP--SPPVPPPPPSPSQVGSLERSPENSPAPEQQP 75
           SPP  PHR    +  R     SPSPPP  SPP  P PP  +   S  RS  N P P  +P
Sbjct: 727 SPPSDPHRARTRASHRIPSCPSPSPPPRISPPCAPAPPQSTP--SARRS*SN-PTPSHKP 557


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,480,156
Number of Sequences: 63676
Number of extensions: 844051
Number of successful extensions: 33335
Number of sequences better than 10.0: 1148
Number of HSP's better than 10.0 without gapping: 10558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18944
length of query: 1291
length of database: 12,639,632
effective HSP length: 108
effective length of query: 1183
effective length of database: 5,762,624
effective search space: 6817184192
effective search space used: 6817184192
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)