TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0322.4
         (153 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC208817 similar to GB|AAP68295.1|31711878|BT008856 At5g37370 {A...   205  1e-60
TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partia...    42  9e-05
TC216146 similar to UP|Q7Y256 (Q7Y256) Beta-cyanoalanine synthas...    32  0.12
TC232943 similar to UP|OLE2_ORYSA (Q40646) Oleosin 18 kDa (OSE72...    28  1.7
TC217208 similar to UP|Q9M090 (Q9M090) Kinase binding protein-li...    27  5.0
TC231169                                                               26  8.5
AW755299                                                               26  8.5

>TC208817 similar to GB|AAP68295.1|31711878|BT008856 At5g37370 {Arabidopsis
           thaliana;} , partial (53%)
          Length = 838

 Score =  205 bits (522), Expect(2) = 1e-60
 Identities = 99/112 (88%), Positives = 101/112 (89%)
 Frame = +1

Query: 6   IMEIQTSGRPIESLLEKVLCMNILSSDYFKELYRLKTYLEVIDEIYNQVDHVEPWMAGNC 65
           IMEIQT GRPI+SLLEKVLCMNILSSDYFKELYRLKTY EVIDEIYNQVDHVEPWM GNC
Sbjct: 190 IMEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNC 369

Query: 66  RGPSTFFCLLY*FFTMMLTVKQMHGLLKHPDSPYIRVVGFLYLRYVPDPNTV 117
           RGPST FCLLY FFTM LTVKQMHGLLKH DSPYIR VGFLYLRY  DP T+
Sbjct: 370 RGPSTAFCLLYKFFTMKLTVKQMHGLLKHLDSPYIRAVGFLYLRYCADPKTL 525



 Score = 43.9 bits (102), Expect(2) = 1e-60
 Identities = 23/32 (71%), Positives = 26/32 (80%)
 Frame = +3

Query: 115 NTV*LV*TIYKG**GIFSWI*WTNDYNGCIYP 146
           +T+ LV* I K **GIFS I*W+NDYNGCI P
Sbjct: 519 DTMELV*AICKR**GIFSRI*WSNDYNGCICP 614


>TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partial (88%)
          Length = 1691

 Score = 42.4 bits (98), Expect = 9e-05
 Identities = 27/93 (29%), Positives = 49/93 (52%)
 Frame = +3

Query: 17  ESLLEKVLCMNILSSDYFKELYRLKTYLEVIDEIYNQVDHVEPWMAGNCRGPSTFFCLLY 76
           ++L+EK+L   I  + Y+KE     T   ++D+   ++DH+     GN R P+ F CL+ 
Sbjct: 261 QNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAM-ELDHLGGTYGGN-RKPTPFMCLVM 434

Query: 77  *FFTMMLTVKQMHGLLKHPDSPYIRVVGFLYLR 109
               +    + +   +K+ D  Y+R++G  YLR
Sbjct: 435 KMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLR 533


>TC216146 similar to UP|Q7Y256 (Q7Y256) Beta-cyanoalanine synthase, partial
           (96%)
          Length = 1431

 Score = 32.0 bits (71), Expect = 0.12
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -2

Query: 91  LLKHPDSPYIRVVGFLYLRYVPDPNTV 117
           LL    +PYI  +GFL LRY P P TV
Sbjct: 938 LLSLGSTPYILTLGFLDLRYCPTPETV 858


>TC232943 similar to UP|OLE2_ORYSA (Q40646) Oleosin 18 kDa (OSE721), partial
           (8%)
          Length = 444

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 10/22 (45%), Positives = 17/22 (76%)
 Frame = +2

Query: 16  IESLLEKVLCMNILSSDYFKEL 37
           +E+++++ LC NIL  +Y KEL
Sbjct: 248 VEAIIQQCLCENILQLEYIKEL 313


>TC217208 similar to UP|Q9M090 (Q9M090) Kinase binding protein-like, partial
           (60%)
          Length = 1498

 Score = 26.6 bits (57), Expect = 5.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 93  KHPDSPYIRVVGFLYLRYVPDP 114
           +HP  PY+  +G+LY R  P P
Sbjct: 181 RHPLRPYLDYIGYLYQRMDPLP 246


>TC231169 
          Length = 884

 Score = 25.8 bits (55), Expect = 8.5
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -2

Query: 35  KELY-RLKTYLEVIDE---IYNQVDHVEPWMAGN 64
           +ELY RL  Y +++ +    Y+Q +H  PW  G+
Sbjct: 385 RELYPRLSVYNQIVGQKVYSYHQYNHPHPWQEGS 284


>AW755299 
          Length = 427

 Score = 25.8 bits (55), Expect = 8.5
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -2

Query: 35  KELY-RLKTYLEVIDE---IYNQVDHVEPWMAGN 64
           +ELY RL  Y +++ +    Y+Q +H  PW  G+
Sbjct: 423 RELYPRLSVYNQIVGQKVYSYHQYNHPHPWQEGS 322


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.352    0.162    0.599 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,464,773
Number of Sequences: 63676
Number of extensions: 104530
Number of successful extensions: 773
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of query: 153
length of database: 12,639,632
effective HSP length: 89
effective length of query: 64
effective length of database: 6,972,468
effective search space: 446237952
effective search space used: 446237952
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 55 (25.8 bits)