BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0314.17
(1113 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BM107943 186 4e-47
TC220513 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {A... 159 6e-39
TC223451 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {A... 159 8e-39
CD403754 122 7e-28
BF066638 91 3e-18
TC206131 similar to UP|Q9LYF9 (Q9LYF9) Clathrin binding protein-... 45 2e-04
TC228567 38 0.022
TC216774 weakly similar to UP|SP96_DICDI (P14328) Spore coat pro... 37 0.063
TC220550 similar to GB|AAR28023.1|39545920|AY463621 TAF6 {Arabid... 34 0.41
TC216775 similar to UP|Q9MAJ3 (Q9MAJ3) F27F5.24, partial (20%) 33 0.70
TC205200 similar to UP|HS7M_PEA (P37900) Heat shock 70 kDa prote... 33 0.70
BE657503 similar to SP|P31235|CAQ2_ Calsequestrin cardiac muscl... 33 0.92
TC219518 similar to UP|Q9FYT8 (Q9FYT8) Cyclin-dependent kinase B... 33 0.92
TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 32 1.2
TC213605 weakly similar to UP|RN12_HUMAN (Q9NVW2) RING finger pr... 32 1.2
TC205199 homologue to UP|HS7M_PEA (P37900) Heat shock 70 kDa pro... 32 1.2
TC205202 homologue to UP|HS7M_PEA (P37900) Heat shock 70 kDa pro... 32 1.6
TC219123 similar to GB|AAQ65145.1|34365667|BT010522 At5g09260 {A... 32 2.0
TC216626 similar to UP|VIL2_ARATH (O81644) Villin 2, partial (36%) 31 2.7
TC231968 30 4.5
>BM107943
Length = 376
Score = 186 bits (473), Expect = 4e-47
Identities = 95/125 (76%), Positives = 102/125 (81%)
Frame = +2
Query: 903 TRSAAETQTPGSSSVLVAYFDGEALHAANVGNTGFIIIRDGFIFKKSTAKFHEFNFPLHI 962
TR AAETQ+PGS S+LV FDG+ LHAANVGNTGFIIIRDG IFKKST FHEFNFPL I
Sbjct: 2 TRGAAETQSPGSCSILVTNFDGQVLHAANVGNTGFIIIRDGSIFKKSTPMFHEFNFPLQI 181
Query: 963 VKGDDPSEIIEGYKVDLCDGDVIIFATNGLFDNLYDQEIASTISKSLQASLGPQEIAEVL 1022
VKGDDPSE+IEGY +DL DGDVI+ ATNGLFD LY QEIAS IS SL+A L P EIAZ L
Sbjct: 182 VKGDDPSELIEGYTMDLHDGDVIVTATNGLFDXLYXQEIASIISXSLEAXLTPXEIAZFL 361
Query: 1023 AKRAQ 1027
RAQ
Sbjct: 362 XTRAQ 376
>TC220513 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {Arabidopsis
thaliana;} , partial (81%)
Length = 1332
Score = 159 bits (402), Expect = 6e-39
Identities = 95/253 (37%), Positives = 142/253 (55%), Gaps = 3/253 (1%)
Frame = +1
Query: 810 SVEMASYGENTSRTELFLVSAAACLPHPSKALTGREDAYFI-SHQNWVAVADGVGQWSPE 868
S++ ++G L L S + LPHP K TG EDA+FI + + + VADGVG W+
Sbjct: 433 SIDQTNFGGE----RLKLFSGSCYLPHPDKEDTGGEDAHFICTDEQAIGVADGVGGWADV 600
Query: 869 GNNSGPYIRELMEKCKNIVSSHENISTIKPAEVLTRSAAETQTPGSSSVLVAYFDGEALH 928
G N+G + RELM + E ++I PA VL ++ + T+ GSS+ + LH
Sbjct: 601 GVNAGLFARELMSHSVRAIEE-EPKNSINPARVLEKAHSCTKAKGSSTACIITLTDTGLH 777
Query: 929 AANVGNTGFIIIRDGFIFKKSTAKFHEFNFP--LHIVKGDDPSEIIEGYKVDLCDGDVII 986
A N+G++GFI++RDG +S + H FNF L I G D E + + + GDV++
Sbjct: 778 AINLGDSGFIVVRDGCTIFRSPVQQHGFNFTYQLEIGNGGDLPSSGEVFTIPVAPGDVVV 957
Query: 987 FATNGLFDNLYDQEIASTISKSLQASLGPQEIAEVLAKRAQEVGKSTSTRSPFADAAQAI 1046
T+GLFDNLY E+ + S++A L PQ A+ +A A++ + +PF+ AAQ
Sbjct: 958 AGTDGLFDNLYHDEVTEVVLHSVRAGLEPQVTAQKIAVLARQRALDRNRPTPFSTAAQEA 1137
Query: 1047 GYVGYSGGKLDDL 1059
G+ Y GGKLDD+
Sbjct: 1138 GF-RYYGGKLDDI 1173
>TC223451 similar to GB|AAO63356.1|28950865|BT005292 At4g16580 {Arabidopsis
thaliana;} , partial (81%)
Length = 858
Score = 159 bits (401), Expect = 8e-39
Identities = 89/238 (37%), Positives = 139/238 (58%), Gaps = 3/238 (1%)
Frame = +2
Query: 825 LFLVSAAACLPHPSKALTGREDAYFI-SHQNWVAVADGVGQWSPEGNNSGPYIRELMEKC 883
L ++S + LPHP K TG EDA+FI + + + VADGVG W+ G N+ + +EL+
Sbjct: 38 LKMLSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGINALLFAQELISNL 217
Query: 884 KNIVSSHENISTIKPAEVLTRSAAETQTPGSSSVLVAYFDGEALHAANVGNTGFIIIRDG 943
+ E + VL + A T+ GSS+ + + LHA N+G++GFI++RDG
Sbjct: 218 VRAIQK-EPKGSFNLTRVLREAHANTKVKGSSTACIVALTDKGLHAINLGDSGFIVVRDG 394
Query: 944 FIFKKSTAKFHEFNFPLHIVKGD--DPSEIIEGYKVDLCDGDVIIFATNGLFDNLYDQEI 1001
+S ++ H+FNFP + G+ D E + + + GDV+I T+GLFDNLY+ EI
Sbjct: 395 CTIFESPSQQHDFNFPYQLESGNGADLPSSGEVFTIPVASGDVVISGTDGLFDNLYNSEI 574
Query: 1002 ASTISKSLQASLGPQEIAEVLAKRAQEVGKSTSTRSPFADAAQAIGYVGYSGGKLDDL 1059
+ +++A L PQ A+ +A A++ S S+R+PF+ AA+ G+ Y GGKLDD+
Sbjct: 575 TGVVEHAIRAGLEPQVTAQKIAALARQRALSKSSRTPFSTAAEKAGFC-YYGGKLDDI 745
>CD403754
Length = 476
Score = 122 bits (307), Expect = 7e-28
Identities = 62/102 (60%), Positives = 75/102 (72%)
Frame = -2
Query: 1 MADLFSRSYHCLWIPCRNVPSKHSEQFRISAPFPFPFPRRRISLTHHTHLVSNASSSSSS 60
MA LFSRS+HCLW+PC NVP K SE+ RI AP P P P +S THHT L+ NA+SS +S
Sbjct: 304 MALLFSRSFHCLWLPCCNVPPKSSERLRIYAPIPLPKPW--VSFTHHTRLLPNATSSPNS 131
Query: 61 VPDDVDILSSTECSDGSFVFQFAKASEIRDKLAELEREKLAC 102
P+D DILSSTE SDGSFVF+FA A+EIR+ +EK+ C
Sbjct: 130 DPEDFDILSSTEHSDGSFVFRFASANEIREH*MN*TKEKIRC 5
>BF066638
Length = 413
Score = 90.9 bits (224), Expect = 3e-18
Identities = 47/134 (35%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +3
Query: 898 PAEVLTRSAAETQTPGSSSVLVAYFDGEALHAANVGNTGFIIIRDGFIFKKSTAKFHEFN 957
PA VL ++ + T+ GSS+ + + L+A N+G++GF+++RDG +S + H+FN
Sbjct: 3 PARVLEKAHSSTKARGSSTACIIALTDQGLNAINLGDSGFMVVRDGCTIFRSPVQQHDFN 182
Query: 958 FPLHI---VKGDDPSEIIEGYKVDLCDGDVIIFATNGLFDNLYDQEIASTISKSLQASLG 1014
F + GD PS + + + + GDVI+ T+GLFDNLY+ EI + + +++A L
Sbjct: 183 FTYQLECGSNGDLPSS-GQVFTIPVAPGDVIVAGTDGLFDNLYNNEITAVVVHAMRAGLS 359
Query: 1015 PQEIAEVLAKRAQE 1028
PQ A+ +A A++
Sbjct: 360 PQVTAQKIAALARQ 401
>TC206131 similar to UP|Q9LYF9 (Q9LYF9) Clathrin binding protein-like, partial
(52%)
Length = 2220
Score = 44.7 bits (104), Expect = 2e-04
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 17/187 (9%)
Frame = +3
Query: 355 ESDMFSD-LNNGASGEVEEKLDGDEEDAISTVTPESDMFSDMNNGASGEVEEKLDFHEAD 413
+ D F+D + S E E+ G A + E+ AS E K
Sbjct: 825 DGDRFNDSYRDKGSYEEEKDYQGKSHHATAGDNQENSFKKGSARSASKSQENKSSRVSKS 1004
Query: 414 ALSTDTPGSNVNSDMNNGASGEVEEKIDDHEEASVSSITP-----ESDMFTDISSGALGE 468
+ + + GS V S ++ + E+ +DD + S+ T + D+F G L
Sbjct: 1005 STNANNYGS-VPSQSSSVPANSTEDDMDDFDPRGTSTKTSAGNSNQVDLFGQDLIGDL-- 1175
Query: 469 VDEKLDVPEEVAVSAVTPESDMFSD---------MNNGSAGEVEEKLD--HEEVAVSTVT 517
+D VP E A ++ PE D+F+D ++ G+ + + ++D + A+ TVT
Sbjct: 1176 MDAPTSVPVEKAATSNVPEVDLFADASFVSAEPHLDKGAISQPQAEVDLFSSQPAIPTVT 1355
Query: 518 PEADMFT 524
P D+F+
Sbjct: 1356 PTVDLFS 1376
Score = 34.3 bits (77), Expect = 0.31
Identities = 64/297 (21%), Positives = 119/297 (39%), Gaps = 28/297 (9%)
Frame = +3
Query: 216 SQADDHKEVVVSRTVT------AVSDVFSDINGGASEEVEEKVD--GQEEVVVSAVNPEL 267
S++ ++K VS++ T +V S + ++E+ + D G + + ++
Sbjct: 963 SKSQENKSSRVSKSSTNANNYGSVPSQSSSVPANSTEDDMDDFDPRGTSTKTSAGNSNQV 1142
Query: 268 DMFG-DPVSSAFDGHKEV-----VSAVTPELDVFGGLNSGASGEVEEEVDGLAVSAATQE 321
D+FG D + D V ++ PE+D+F + ++ E +D A+S E
Sbjct: 1143 DLFGQDLIGDLMDAPTSVPVEKAATSNVPEVDLFADASFVSA---EPHLDKGAISQPQAE 1313
Query: 322 LDMFGDLNSGGALGEVEEKLDGDEDDAISTVTPESDMFS----DLNNGASGEVEEKLDGD 377
+D+F AI TVTP D+FS + E ++
Sbjct: 1314 VDLFSS------------------QPAIPTVTPTVDLFSIPEPAVQPNNKSEKSVPMNNS 1439
Query: 378 EEDAISTVT----PESDMFSDMNNGASGEVEEKLDFHEADALSTDTPGSNVNSDMNNGAS 433
D + V SD+F D + ++D++S+ P +NV SD G
Sbjct: 1440 SIDPFAAVPLNNFDGSDIFGDFTS-------------QSDSVSSQ-PSNNVVSD---GKH 1568
Query: 434 GEVEEKIDDHEEASVSSITPESDMFTDISSG------ALGEVDEKLDVPEEVAVSAV 484
V K + S ++P+ D F + SG + G +D + P++V+++ V
Sbjct: 1569 DNVTGK-----SLADSKVSPKKDNF-QVKSGVWADSLSRGLIDLNITAPKKVSLADV 1721
>TC228567
Length = 1531
Score = 38.1 bits (87), Expect = 0.022
Identities = 66/334 (19%), Positives = 128/334 (37%), Gaps = 30/334 (8%)
Frame = +2
Query: 490 MFSDMNNGSAGEVEEKLDHEEVAVSTVTPEADMFTDVNSGALGEVDEKLDVPEEVAVSAV 549
M S +N E +E+++ ++ + T +DVN + V K + EE +V A
Sbjct: 332 MESKVNEEFYKEQKEEVEELKLNIEKAT------SDVNRLRVASVSLKSKLEEEKSVLAS 493
Query: 550 TPESD---------------------MFSDMNNGSAGEVEEKLDHEEVATVSTVTREADM 588
+S+ F M A E+ +L + + ++EAD
Sbjct: 494 LKQSEEKASAAVVNLQAELEKSRSAIAFIQMKENEAREMMTELPKK----LQKASQEADE 661
Query: 589 FTDINNGAPGEVEEKLDDKEEVSVSTVTLEADMFTDMNSSAPGEVDEKLDGHEEVA-DLT 647
+ A E+ E ++ E+ + TLE+ + +V E L A + +
Sbjct: 662 AKSLAQAAQAELIEAQEEVEQAKAKSSTLESSLLAAQKEIEAAKVAEMLARDAITALEKS 841
Query: 648 SGASGEVEEKLDALEEVVISIVTESDLFSDMNSGASEEVEEKEGRRTADKGHGVDVATSY 707
A G +K D+ V +++ +L S + + EE+ R ++ ATS
Sbjct: 842 ESAKGNKNDK-DSSSMVTLTLEEYHEL-----SRRAYKAEEQANAR-------IEAATSQ 982
Query: 708 LTGSVDADLSELVPASTLLDSEQAVNTEANNLTTSLESELVANDEETTHDIVDDSIDASE 767
+ + +++L L L+ E +V E+ + T + H++ + +
Sbjct: 983 IQIARESELRSLEKLEE-LNEELSVRRESLKIATGNSEKANEGKLAVEHELRTWRAEQKQ 1159
Query: 768 MEKSTMLHDLPA--------SSDMENKIDVGNTE 793
EK+T L++ + SS + K+ NTE
Sbjct: 1160QEKATELNEQTSDPTEPAHDSSSPKGKVPSNNTE 1261
>TC216774 weakly similar to UP|SP96_DICDI (P14328) Spore coat protein SP96,
partial (5%)
Length = 1306
Score = 36.6 bits (83), Expect = 0.063
Identities = 53/244 (21%), Positives = 91/244 (36%), Gaps = 18/244 (7%)
Frame = +1
Query: 238 SDINGGASEEVEEKVDGQEEVVVS----AVNPE-LDMFGDPVSSAFDGHKEVVSAVTPEL 292
SD+ G +EEV + + E+ V + +P+ LD+ G G K P+
Sbjct: 46 SDMPQGQNEEVGDAQNEDGEIAVGNDEESKDPQNLDVTGQ---EELQGDKTGTLEENPDQ 216
Query: 293 DVFGGLNSGASGEVEEEVDG----LAVSAATQELDMF---GDLNSGGALGEVEEKLDGDE 345
V + S + + D LA S +E ++ GDL L + E + E
Sbjct: 217 PVDAKMLSDEMQRDQTDPDNQQSTLAPSGEREEGELLPDIGDLEGASDLSNIAENQESRE 396
Query: 346 DDAISTVTPE------SDMFSDLNNGASGEVEEKLDGDEEDAISTVTPESDMFSDMNNGA 399
+ S TPE D + S E+ DE D++ SD D+N
Sbjct: 397 GLSESAATPERSPATVDDDALEAGEINSPELSSDDKNDEGDSVEDAADASDKLMDVNEQI 576
Query: 400 SGEVEEKLDFHEADALSTDTPGSNVNSDMNNGASGEVEEKIDDHEEASVSSITPESDMFT 459
S E ++ A+ + G+ + S + +S +V + + + T E+ +
Sbjct: 577 SAESDQ-----VAEPTPVASEGATLTSSVVESSSSKVNLPVPRQGTPNAPAETEETKQAS 741
Query: 460 DISS 463
I S
Sbjct: 742 PIGS 753
>TC220550 similar to GB|AAR28023.1|39545920|AY463621 TAF6 {Arabidopsis
thaliana;} , partial (23%)
Length = 915
Score = 33.9 bits (76), Expect = 0.41
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 1016 QEIAEVLAKRAQEVGKSTSTRSPFADAAQAIGYVGYSGGKLDDLKTSGLLTMQWK--LNY 1073
QE A A A + S+S+ + + G V +GG LKTS LT WK LN
Sbjct: 536 QEEAGTQASSADSIIGSSSSNTQMKNETTLDGEVRSNGGDTQALKTSAALTQVWKDELNS 715
Query: 1074 SGTIAELHE 1082
T+ L E
Sbjct: 716 GRTLVSLFE 742
>TC216775 similar to UP|Q9MAJ3 (Q9MAJ3) F27F5.24, partial (20%)
Length = 1074
Score = 33.1 bits (74), Expect = 0.70
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Frame = +3
Query: 313 LAVSAATQELDMF---GDLNSGGALGEVEEKLDGDEDDAISTVTPE------SDMFSDLN 363
LA S +E ++ GDL L + E + E + S TPE D +
Sbjct: 45 LAPSGEREEGELMPDTGDLEGASDLSNIAENQESREGQSESAATPERSPARVDDDALEAG 224
Query: 364 NGASGEVEEKLDGDEEDAISTVTPESDMFSDMNNGASGEVEEKLD-FHEADALSTDTPGS 422
S E+ DE D + SD D+N S E ++ + A ST T
Sbjct: 225 EINSPELSSDDKNDEGDLVEEAADGSDKLIDVNEPISAESDQVAEPVASETATSTSTVAE 404
Query: 423 NVNSDMN 429
+ +S +N
Sbjct: 405 SSSSKVN 425
>TC205200 similar to UP|HS7M_PEA (P37900) Heat shock 70 kDa protein,
mitochondrial precursor, partial (21%)
Length = 646
Score = 33.1 bits (74), Expect = 0.70
Identities = 23/75 (30%), Positives = 34/75 (44%)
Frame = +3
Query: 442 DHEEASVSSITPESDMFTDISSGALGEVDEKLDVPEEVAVSAVTPESDMFSDMNNGSAGE 501
D E ++ I +D +LGE EK +P EVA SD+ M+ + E
Sbjct: 123 DQERKALIDIRNSADTTIYSIEKSLGEYREK--IPSEVAKEIEDAVSDLRQAMSGDNVDE 296
Query: 502 VEEKLDHEEVAVSTV 516
++ KLD AVS +
Sbjct: 297 IKSKLDAANKAVSKI 341
Score = 32.0 bits (71), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 501 EVEEKLDHEEVAVSTVTPEADMFTDVNSGALGEVDEKLDVPEEVAVSAVTPESDMFSDMN 560
E+ + D E A+ + AD +LGE EK +P EVA SD+ M+
Sbjct: 105 ELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYREK--IPSEVAKEIEDAVSDLRQAMS 278
Query: 561 NGSAGEVEEKLD 572
+ E++ KLD
Sbjct: 279 GDNVDEIKSKLD 314
>BE657503 similar to SP|P31235|CAQ2_ Calsequestrin cardiac muscle isoform
precursor (Calsequestrin 2). [Rabbit] {Oryctolagus
cuniculus}, partial (4%)
Length = 662
Score = 32.7 bits (73), Expect = 0.92
Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 2/148 (1%)
Frame = -2
Query: 305 EVEEEVDGLAVSAATQELDMFGDLNSGGALGEVEEKLDGDEDDAISTVTPESDMFSDLNN 364
+V EE G+ V E +M AL + G EDD + E D D N+
Sbjct: 496 DVMEEAAGIFVQEEINEGEM-----EAAALNASSSERSGYEDDVYQEIGDEYDYLVDNND 332
Query: 365 GASGEVEEKLDGDEEDAISTVTPESDMFSDMNNGASGEVEEKLDFHEADALSTDTPGSNV 424
G G K + + V + DM D N + K+D D G +
Sbjct: 331 GYQGVFSGKSENLLHGSHYNVVGKEDMDIDDNVDDDDDDNGKIDL--------DVEGYII 176
Query: 425 --NSDMNNGASGEVEEKIDDHEEASVSS 450
NSD + E+ +D S SS
Sbjct: 175 GGNSDARDRKEENAEQNMDLDGVGSTSS 92
>TC219518 similar to UP|Q9FYT8 (Q9FYT8) Cyclin-dependent kinase B1-2,
complete
Length = 1333
Score = 32.7 bits (73), Expect = 0.92
Identities = 24/54 (44%), Positives = 27/54 (49%), Gaps = 4/54 (7%)
Frame = -1
Query: 85 ASEIRDKLAELEREKLACEVVEGGG----KVGIQALLSDSIEILNNEVDDNLQE 134
A + LAELE E L EG G VGI LL +EIL N+V D L E
Sbjct: 424 AVAVSHALAELEEEALDEGRREGPGIGALAVGIDELLEIGVEILENKVKDGLGE 263
>TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 857
Score = 32.3 bits (72), Expect = 1.2
Identities = 23/90 (25%), Positives = 39/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 367 SGEVEEKLDGDEEDAISTVTPE---SDMFSDMNNGASGEVEEKLDFHEADALSTDTPGSN 423
+ E E++ DGDE+D E + FS G+ E++ + +D D G +
Sbjct: 358 NSETEDEEDGDEDDEDGPDEDEDGDDEEFSGEEGDEGGDPEDEANGEGSDDGDEDDDGDD 537
Query: 424 VNSDMNNGASGEVEEKIDDHEEASVSSITP 453
N D + GE EE+ ++ +E P
Sbjct: 538 -NGDEEDDDDGEDEEEDEEEDEEETPQPPP 624
>TC213605 weakly similar to UP|RN12_HUMAN (Q9NVW2) RING finger protein 12
(LIM domain interacting RING finger protein) (RING
finger LIM domain-binding protein) (R-LIM) (NY-REN-43
antigen), partial (6%)
Length = 704
Score = 32.3 bits (72), Expect = 1.2
Identities = 31/118 (26%), Positives = 49/118 (41%)
Frame = -3
Query: 336 EVEEKLDGDEDDAISTVTPESDMFSDLNNGASGEVEEKLDGDEEDAISTVTPESDMFSDM 395
E+E LD + T+ P+SD D + + E +E L GD DA + SDM
Sbjct: 648 EIENLLDSTDP----TLGPDSDYDYDDLDEVADEEDEDLIGDVSDAEMNMDIPSDM---- 493
Query: 396 NNGASGEVEEKLDFHEADALSTDTPGSNVNSDMNNGASGEVEEKIDDHEEASVSSITP 453
EE++D D D +V+ D ++G E ++ HE ++P
Sbjct: 492 -------EEEEVDASPPDDDDIDIQVGDVD-DASDGDEEEAGKRKRKHESGGKKGVSP 343
>TC205199 homologue to UP|HS7M_PEA (P37900) Heat shock 70 kDa protein,
mitochondrial precursor, partial (94%)
Length = 2204
Score = 32.3 bits (72), Expect = 1.2
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +3
Query: 442 DHEEASVSSITPESDMFTDISSGALGEVDEKLDVPEEVAVSAVTPESDMFSDMNNGSAGE 501
D E ++ I +D +LGE +K +P EVA SD+ + M +A E
Sbjct: 1671 DQERKALIDIRNSADTSIYSIEKSLGEYRDK--IPSEVAKEIEDAVSDLRTAMAGDNADE 1844
Query: 502 VEEKLDHEEVAVSTV 516
++ KLD AVS +
Sbjct: 1845 IKAKLDAANKAVSKI 1889
Score = 31.2 bits (69), Expect = 2.7
Identities = 22/72 (30%), Positives = 34/72 (46%)
Frame = +3
Query: 501 EVEEKLDHEEVAVSTVTPEADMFTDVNSGALGEVDEKLDVPEEVAVSAVTPESDMFSDMN 560
E+ + D E A+ + AD +LGE +K +P EVA SD+ + M
Sbjct: 1653 ELHAQKDQERKALIDIRNSADTSIYSIEKSLGEYRDK--IPSEVAKEIEDAVSDLRTAMA 1826
Query: 561 NGSAGEVEEKLD 572
+A E++ KLD
Sbjct: 1827 GDNADEIKAKLD 1862
>TC205202 homologue to UP|HS7M_PEA (P37900) Heat shock 70 kDa protein,
mitochondrial precursor, partial (51%)
Length = 1228
Score = 32.0 bits (71), Expect = 1.6
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 442 DHEEASVSSITPESDMFTDISSGALGEVDEKLDVPEEVAVSAVTPESDMFSDMNNGSAGE 501
D E ++ I +D +LGE +K +P EVA SD+ M+ + E
Sbjct: 722 DQERKALIDIRNSADTTIYSIEKSLGEYRDK--IPSEVAKEIEDAVSDLRKAMSEDNVDE 895
Query: 502 VEEKLDHEEVAVSTV 516
++ KLD AVS +
Sbjct: 896 IKSKLDAANKAVSKI 940
Score = 30.8 bits (68), Expect = 3.5
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +2
Query: 501 EVEEKLDHEEVAVSTVTPEADMFTDVNSGALGEVDEKLDVPEEVAVSAVTPESDMFSDMN 560
E+ + D E A+ + AD +LGE +K +P EVA SD+ M+
Sbjct: 704 ELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYRDK--IPSEVAKEIEDAVSDLRKAMS 877
Query: 561 NGSAGEVEEKLD 572
+ E++ KLD
Sbjct: 878 EDNVDEIKSKLD 913
>TC219123 similar to GB|AAQ65145.1|34365667|BT010522 At5g09260 {Arabidopsis
thaliana;} , partial (92%)
Length = 852
Score = 31.6 bits (70), Expect = 2.0
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Frame = +1
Query: 397 NGASGEVEEKLDFHEADALSTDTPGSN-----VNSDMNNGASGEVEEKIDDHEEASVSSI 451
N A ++ +++ + L DT + +N M S E EE+I E +
Sbjct: 295 NDAMKAIQSEINIEDVQKLMDDTAEAKAYQDEINEIMGEKLSAEDEEEILAEFEDLEIQL 474
Query: 452 TPESDMFTDISSGALGEVDEKLDVPEEVAVSAVTPESDM 490
T + ++ A E++EKLD+P+ + VT ++++
Sbjct: 475 TVQD--LPEVPPSANEEIEEKLDLPDVPTKAPVTSDAEV 585
Score = 30.4 bits (67), Expect = 4.5
Identities = 36/155 (23%), Positives = 61/155 (39%)
Frame = +1
Query: 436 VEEKIDDHEEASVSSITPESDMFTDISSGALGEVDEKLDVPEEVAVSAVTPESDMFSDMN 495
VE+++ D E AS ES + A+ + ++++ + + T E+ + D
Sbjct: 223 VEQQLADIELASKQKAVFES---LKAGNDAMKAIQSEINIEDVQKLMDDTAEAKAYQDEI 393
Query: 496 NGSAGEVEEKLDHEEVAVSTVTPEADMFTDVNSGALGEVDEKLDVPEEVAVSAVTPESDM 555
N GE D EE+ E + D+PE V P ++
Sbjct: 394 NEIMGEKLSAEDEEEILAEFEDLEIQLTVQ-------------DLPE------VPPSANE 516
Query: 556 FSDMNNGSAGEVEEKLDHEEVATVSTVTREADMFT 590
E+EEKLD +V T + VT +A++ T
Sbjct: 517 ----------EIEEKLDLPDVPTKAPVTSDAEVST 591
>TC216626 similar to UP|VIL2_ARATH (O81644) Villin 2, partial (36%)
Length = 1777
Score = 31.2 bits (69), Expect = 2.7
Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 7/175 (4%)
Frame = +3
Query: 280 GHKEVVSAVTPELDVFGGLNSGASGEVEEEVDGLAVSAATQELDMFGDLNSGGALGEVEE 339
G ++ A+ + FG + ASG ++ ++GL Q + LNS
Sbjct: 639 GPRQRAEALAALSNAFGSSSEKASGLAQDRLNGLGQGGPRQRAEALAALNSA-------- 794
Query: 340 KLDGDEDDAISTVTPESDMFSDLNNGASGE-------VEEKLDGDEEDAISTVTPESDMF 392
+ T TP + A+ + EK + +++ +P ++
Sbjct: 795 ---FNSSSGTKTFTPRPSGRGQGSQRAAAVAALSQVLMAEKKKSPDGSPVASRSPITEGS 965
Query: 393 SDMNNGASGEVEEKLDFHEADALSTDTPGSNVNSDMNNGASGEVEEKIDDHEEAS 447
+ S EVEE + E + L +T G++G++E K ++ EE +
Sbjct: 966 ATETKSDSSEVEEVAEAKETEELPPET-----------GSNGDLELKQENAEEGN 1097
>TC231968
Length = 610
Score = 30.4 bits (67), Expect = 4.5
Identities = 28/109 (25%), Positives = 48/109 (43%), Gaps = 7/109 (6%)
Frame = +1
Query: 467 GEVDEKLDVPEEVAVSAVTPESDMFSDMNNG--SAGEVEEKLDH-EEVAVSTVTPEADMF 523
G VDE LDV + + P++ ++ NG AG + + +E+ V P+ +
Sbjct: 7 GRVDEMLDVFASIKDTGFVPDTVSYNTXINGLRKAGRXDMCFVYFKEMTEKGVEPDLLTY 186
Query: 524 TDVNS--GALGEVDEKLDVPEEVAVSAVTPESDMFSDM--NNGSAGEVE 568
T + G G V+E L E+ + V P ++ + N G+VE
Sbjct: 187 TAIIEIFGRSGNVEESLKCFREMKLKGVLPSIYIYRSLIHNLNKTGKVE 333
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.307 0.127 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,290,725
Number of Sequences: 63676
Number of extensions: 478049
Number of successful extensions: 2328
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of query: 1113
length of database: 12,639,632
effective HSP length: 107
effective length of query: 1006
effective length of database: 5,826,300
effective search space: 5861257800
effective search space used: 5861257800
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0314.17