BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0304.6
(243 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC217169 homologue to UP|O81926 (O81926) Thaumatin-like protein ... 466 e-132
TC226775 homologue to UP|P21_SOYBN (P25096) P21 protein, partial... 322 7e-89
TC226774 UP|P21_SOYBN (P25096) P21 protein, complete 311 2e-85
TC226941 weakly similar to UP|Q8LEV9 (Q8LEV9) Osmotin, partial (... 301 2e-82
TC226940 weakly similar to UP|Q93XD4 (Q93XD4) Thaumatin-like pro... 299 9e-82
BF068736 similar to GP|3549691|emb thaumatin-like protein PR-5b ... 193 5e-50
TC217170 homologue to UP|O81926 (O81926) Thaumatin-like protein ... 182 1e-46
TC228135 similar to PIR|T05694|T05694 pathogenesis-related prote... 182 2e-46
TC205651 similar to UP|TLPH_ARATH (P50699) Thaumatin-like protei... 172 2e-43
TC222863 similar to GB|AAP13435.1|30023804|BT006327 At1g20030 {A... 167 5e-42
TC204396 similar to GB|AAC36740.1|3643249|AF090143 thaumatin-lik... 166 9e-42
TC205652 similar to UP|TLPH_ARATH (P50699) Thaumatin-like protei... 152 1e-37
TC228763 similar to GB|AAP13435.1|30023804|BT006327 At1g20030 {A... 149 2e-36
TC227925 similar to UP|OLP1_LYCES (Q41350) Osmotin-like protein ... 140 4e-34
TC228762 similar to GB|AAP13435.1|30023804|BT006327 At1g20030 {A... 124 5e-29
TC209980 similar to UP|TP1B_MALDO (P83336) Thaumatin-like protei... 122 1e-28
TC231432 weakly similar to UP|Q9CA24 (Q9CA24) Thaumatin-like pro... 111 3e-25
TC212209 similar to UP|O22973 (O22973) Thaumatin isolog, partial... 103 5e-23
TC222077 similar to PIR|T05493|T05493 pathogenesis-related prote... 103 7e-23
TC220668 similar to UP|Q9MB90 (Q9MB90) Thaumatin-like protein (F... 97 7e-21
>TC217169 homologue to UP|O81926 (O81926) Thaumatin-like protein PR-5b
precursor (Fragment), partial (87%)
Length = 945
Score = 466 bits (1199), Expect = e-132
Identities = 212/238 (89%), Positives = 221/238 (92%)
Frame = +2
Query: 1 MGYLTLSSLLLMLTASLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNA 60
M YL L SLL L SL T T AANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNL VN
Sbjct: 23 MVYLALCSLLT-LALSLAT-THAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLWVNP 196
Query: 61 GTAMARIWGRTGCNFDGAGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNQDFYDI 120
GTAMARIWGRTGCNFDG+GRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQ+GNQDFYDI
Sbjct: 197 GTAMARIWGRTGCNFDGSGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQFGNQDFYDI 376
Query: 121 SLVDGFNIPMDFFPLNGGCHKISCTADINGQCPNELRAPGGCNNPCTVYKTNEFCCTNGQ 180
SLVDGFNIPMDF+PLNGGCHKISC+ADINGQCP LRAPGGCNNPCTV+KTNE+CCTNGQ
Sbjct: 377 SLVDGFNIPMDFYPLNGGCHKISCSADINGQCPGPLRAPGGCNNPCTVFKTNEYCCTNGQ 556
Query: 181 GTCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCPLGSPHVTLMMPGN 238
G+CGPTN+SRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCPLG PHVTL MP +
Sbjct: 557 GSCGPTNYSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCPLGEPHVTLHMPAS 730
>TC226775 homologue to UP|P21_SOYBN (P25096) P21 protein, partial (90%)
Length = 781
Score = 322 bits (826), Expect = 7e-89
Identities = 145/224 (64%), Positives = 177/224 (78%), Gaps = 2/224 (0%)
Frame = +3
Query: 4 LTLSSLLLMLTASLVTLTR-AANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNAGT 62
+TL+ L +TA T AA F+I N C Y VWAAA PGGGRRL+ GQ+W L V AGT
Sbjct: 36 MTLTKALFFVTALCCTSAAYAARFDITNRCSYPVWAAAVPGGGRRLNSGQSWALDVPAGT 215
Query: 63 AMARIWGRTGCNFDGAGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNQDFYDISL 122
AR+W RTGCNFDG+GRG CQTGDC G L+C+ +G PPNTLAE+ALNQ+ N DF+DISL
Sbjct: 216 KGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGTPPNTLAEYALNQFSNLDFFDISL 395
Query: 123 VDGFNIPMDFFPLNGGCHK-ISCTADINGQCPNELRAPGGCNNPCTVYKTNEFCCTNGQG 181
VDGFN+PMDF P + GC + I CTADINGQCP++L+ GGCNNPCTV+KT+++CC + G
Sbjct: 396 VDGFNVPMDFSPTSNGCTRGIRCTADINGQCPSQLKTQGGCNNPCTVFKTDQYCCNS--G 569
Query: 182 TCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
+C PT++SRFFK RC D+YSYP+DDPTSTFTC G+NY+VVFCP
Sbjct: 570 SCVPTDYSRFFKQRCPDAYSYPKDDPTSTFTCKGGTNYRVVFCP 701
>TC226774 UP|P21_SOYBN (P25096) P21 protein, complete
Length = 815
Score = 311 bits (796), Expect = 2e-85
Identities = 137/205 (66%), Positives = 169/205 (81%), Gaps = 2/205 (0%)
Frame = +1
Query: 23 AANFEIVNNCPYTVWAAASP-GGGRRLDRGQTWNLGVNAGTAMARIWGRTGCNFDGAGRG 81
AA FEI N C YTVWAA+ P GGG +L+ GQ+W++ V AGT AR+W RTGCNFDG+GRG
Sbjct: 64 AARFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRG 243
Query: 82 RCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNQDFYDISLVDGFNIPMDFFPLNGGCHK 141
CQTGDC G L+C+ +G PPNTLAE+ LN + N DF+DISLVDGFN+PMDF P + GC +
Sbjct: 244 GCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTR 423
Query: 142 -ISCTADINGQCPNELRAPGGCNNPCTVYKTNEFCCTNGQGTCGPTNFSRFFKDRCHDSY 200
ISCTADINGQCP+EL+ GGCNNPCTV+KT+++CC + G+CGPT++SRFFK RC D+Y
Sbjct: 424 GISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNS--GSCGPTDYSRFFKQRCPDAY 597
Query: 201 SYPQDDPTSTFTCPAGSNYKVVFCP 225
SYP+DDPTSTFTC G++Y+VVFCP
Sbjct: 598 SYPKDDPTSTFTCNGGTDYRVVFCP 672
>TC226941 weakly similar to UP|Q8LEV9 (Q8LEV9) Osmotin, partial (78%)
Length = 1047
Score = 301 bits (770), Expect = 2e-82
Identities = 131/218 (60%), Positives = 158/218 (72%)
Frame = +1
Query: 8 SLLLMLTASLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNAGTAMARI 67
S+ L + S V +AANF I NNC YTVWAAA PGGG RL+ G++WN+ V GT RI
Sbjct: 67 SIFLFIAMSCVAAAQAANFNITNNCTYTVWAAAVPGGGARLNPGESWNISVTNGTTRGRI 246
Query: 68 WGRTGCNFDGAGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNQDFYDISLVDGFN 127
WGRT C FD AGRG+C TGDC G L C G PPNT+ +FALNQY N DFYDISLVDGFN
Sbjct: 247 WGRTNCTFDNAGRGKCLTGDCEGVLECNKTGTPPNTVVDFALNQYNNLDFYDISLVDGFN 426
Query: 128 IPMDFFPLNGGCHKISCTADINGQCPNELRAPGGCNNPCTVYKTNEFCCTNGQGTCGPTN 187
+P+ P C + C ADI G+CP +L+ PGGCNNPCTV+ T ++CC+ G CGPT+
Sbjct: 427 VPLQLTP-TYNCSSVKCAADIIGECPTQLQVPGGCNNPCTVFNTTQYCCSTGAAGCGPTD 603
Query: 188 FSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
+S+FFK+RC D+YSYP DD TS FTC GS+Y+VVFCP
Sbjct: 604 YSKFFKERCPDAYSYPMDDATSMFTC-MGSDYRVVFCP 714
>TC226940 weakly similar to UP|Q93XD4 (Q93XD4) Thaumatin-like protein,
partial (87%)
Length = 865
Score = 299 bits (765), Expect = 9e-82
Identities = 129/210 (61%), Positives = 155/210 (73%)
Frame = +1
Query: 16 SLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNAGTAMARIWGRTGCNF 75
S V + +AANF I NNC YTVWAAA PGGG RL+ G++WN+ V GT RIWGRT C F
Sbjct: 82 SCVAVAQAANFNITNNCTYTVWAAAVPGGGSRLNPGESWNISVTNGTTGGRIWGRTNCTF 261
Query: 76 DGAGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNQDFYDISLVDGFNIPMDFFPL 135
D AGRG+C TGDC G L C G PPNTL EFALNQY N DFYDISLVDGFNIP+ P
Sbjct: 262 DNAGRGKCLTGDCDGVLECNKTGTPPNTLVEFALNQYNNLDFYDISLVDGFNIPLQVSP- 438
Query: 136 NGGCHKISCTADINGQCPNELRAPGGCNNPCTVYKTNEFCCTNGQGTCGPTNFSRFFKDR 195
C + C ADI G+CP +L+ PGGCNNPCTV+ T ++CC+ G CGPT++S+FFK+R
Sbjct: 439 TYNCSSVKCAADIIGECPTQLQVPGGCNNPCTVFNTTQYCCSTGAAGCGPTDYSKFFKER 618
Query: 196 CHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
C D++SYP DD +S FTC GS+Y++VFCP
Sbjct: 619 CPDAFSYPMDDASSMFTCMGGSDYRLVFCP 708
>BF068736 similar to GP|3549691|emb thaumatin-like protein PR-5b {Cicer
arietinum}, partial (47%)
Length = 457
Score = 193 bits (491), Expect = 5e-50
Identities = 98/144 (68%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +2
Query: 15 ASLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNAGTAMARIWGRTGCN 74
AS + T AAN E VNN P+TVWAAASPGGGRRLDRGQTWNL VN GTAMAR WGRTGCN
Sbjct: 23 ASPLATTHAANSETVNNRPHTVWAAASPGGGRRLDRGQTWNLWVNPGTAMARTWGRTGCN 202
Query: 75 FDGAGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNQDFYDISLVD-GFNIPMDFF 133
DG+GRGR QTGDCTGGLNCQGWGVPPNTLAEFALNQ+G +D YDI L G + F
Sbjct: 203 SDGSGRGRRQTGDCTGGLNCQGWGVPPNTLAEFALNQFGIEDLYDILLGGRGQHFRQTFN 382
Query: 134 PLNGGCHKISCTADINGQCPNELR 157
G K+S GQC LR
Sbjct: 383 L*TEGVTKVSMDGRRIGQCTESLR 454
>TC217170 homologue to UP|O81926 (O81926) Thaumatin-like protein PR-5b
precursor (Fragment), partial (45%)
Length = 554
Score = 182 bits (462), Expect = 1e-46
Identities = 77/90 (85%), Positives = 83/90 (91%)
Frame = +3
Query: 149 NGQCPNELRAPGGCNNPCTVYKTNEFCCTNGQGTCGPTNFSRFFKDRCHDSYSYPQDDPT 208
N + P LRAPGGCNNPCTV+KTNE+CCTNGQG+CGPTN+SRFFKDRCHDSYSYPQDDPT
Sbjct: 171 NVEPPGSLRAPGGCNNPCTVFKTNEYCCTNGQGSCGPTNYSRFFKDRCHDSYSYPQDDPT 350
Query: 209 STFTCPAGSNYKVVFCPLGSPHVTLMMPGN 238
STFTCPAGSNYKVVFCPLG PHVTL MP +
Sbjct: 351 STFTCPAGSNYKVVFCPLGEPHVTLHMPAS 440
Score = 81.3 bits (199), Expect = 4e-16
Identities = 43/55 (78%), Positives = 43/55 (78%)
Frame = +1
Query: 1 MGYLTLSSLLLMLTASLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWN 55
M YL L SLL L SL T T AANFEIV NCPYTVWAA SPGGGRRLDRGQTWN
Sbjct: 22 MVYLALCSLLT-LALSLAT-THAANFEIVYNCPYTVWAAGSPGGGRRLDRGQTWN 180
>TC228135 similar to PIR|T05694|T05694 pathogenesis-related protein
F20M13.220 - Arabidopsis thaliana {Arabidopsis
thaliana;} , partial (72%)
Length = 1451
Score = 182 bits (461), Expect = 2e-46
Identities = 108/245 (44%), Positives = 135/245 (55%), Gaps = 20/245 (8%)
Frame = +3
Query: 1 MGYLTLSSLLLMLTASLVTLT----RAANFEIVNNCPYTVW------AAASPGGGRRLDR 50
MG L S +L+ +L+ LT A F N C YTVW A + P +
Sbjct: 189 MGLLASSCFILI---ALLLLTPKGVMGATFTFFNKCDYTVWPGILANAGSPPLDSTGFEL 359
Query: 51 GQTWNLGVNAGTAMA-RIWGRTGCNFDGAGRGRCQTGDC-TGGLNCQGWG-VPPNTLAEF 107
+ + A T + R WGRTGC FDG+G G C TGDC +G + C G G PP TLAEF
Sbjct: 360 PKDTSRAFQAPTGWSGRFWGRTGCTFDGSGAGSCLTGDCGSGQVECNGAGAAPPATLAEF 539
Query: 108 ALNQYGNQDFYDISLVDGFNIPMDFFPLNGG--CHKISCTADINGQCPNELRAPGG--CN 163
L G QDFYD+SLVDG+N+PM G C CT+D+N QCP ELRA G C
Sbjct: 540 TLGT-GGQDFYDVSLVDGYNLPMIVEGTGGSGLCASTGCTSDLNQQCPAELRASEGSACK 716
Query: 164 NPCTVYKTNEFCCTNGQG---TCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYK 220
+ C + + E+CC+ G TC P+ +S FK C SYSY DD TSTFTC +G++Y
Sbjct: 717 SACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDATSTFTC-SGADYT 893
Query: 221 VVFCP 225
V FCP
Sbjct: 894 VTFCP 908
>TC205651 similar to UP|TLPH_ARATH (P50699) Thaumatin-like protein precursor,
partial (91%)
Length = 1285
Score = 172 bits (435), Expect = 2e-43
Identities = 90/236 (38%), Positives = 123/236 (51%), Gaps = 20/236 (8%)
Frame = +1
Query: 10 LLMLTASLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNAGTAM----- 64
+ LT +++ ++ +++ N C + VW P G+ + + L N ++
Sbjct: 40 IFFLTLTVLKVSASSSVIFYNKCQHPVWPGIQPSAGKPVLARGGFKLAPNRAYSLQLPAL 219
Query: 65 --ARIWGRTGCNFDGAGRGRCQTGDCTGGLNCQG-WGVPPNTLAEFALNQYGNQDFYDIS 121
R WGR GC+FD GRGRC TGDC G L C G G PP TLAEF L QDFYD+S
Sbjct: 220 WSGRFWGRHGCSFDAGGRGRCATGDCGGSLFCNGIGGSPPATLAEFTLG--NEQDFYDVS 393
Query: 122 LVDGFNIPMDFFPLNGG--CHKISCTADINGQCPNELRAPG-------GCNNPCTVYKTN 172
LVDG+N+P+ P G C C +D+N CP L+ C + C+ + +
Sbjct: 394 LVDGYNLPISITPFKGSGKCSYAGCVSDLNTMCPVGLQVRSRDNKRVVACKSACSAFNSP 573
Query: 173 EFCCTNGQGT---CGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
+CCT G+ C PT +S+ FK C +YSY DDPTS TC +NY V FCP
Sbjct: 574 RYCCTGSYGSPQACKPTVYSKIFKTACPKAYSYAYDDPTSIATC-TKANYLVTFCP 738
>TC222863 similar to GB|AAP13435.1|30023804|BT006327 At1g20030 {Arabidopsis
thaliana;} , partial (75%)
Length = 1057
Score = 167 bits (422), Expect = 5e-42
Identities = 96/240 (40%), Positives = 127/240 (52%), Gaps = 24/240 (10%)
Frame = +2
Query: 10 LLMLTASLVTLTRAANFEIVNNCPYTVWA--------AASPGGGRRLDRGQTWNLGVNAG 61
L+ A +V T +F +VN C YTVW A P G L G++ V A
Sbjct: 161 LINFGAGVVATT---SFTLVNKCDYTVWPGILSNAGIATLPTTGFVLQTGESKT--VTAP 325
Query: 62 TAMA-RIWGRTGCNFDGAGRGRCQTGDC-TGGLNCQG-WGVPPNTLAEFALNQYGNQDFY 118
T+ R WGRT C D AG+ C +GDC +G L C G PP TLAEF L+ G DF+
Sbjct: 326 TSWGGRFWGRTLCTQDSAGKFSCLSGDCGSGKLECAGNAATPPATLAEFTLDGAGGLDFF 505
Query: 119 DISLVDGFNIPMDFFPLNGG---CHKISCTADINGQCPNELRAPG-------GCNNPCTV 168
D+SLVDG+N+PM P G C C D+NG CP+ELR C + C
Sbjct: 506 DVSLVDGYNVPMLVAPQGGSGDNCTSTGCVGDLNGACPSELRVTSVDGKQSVACKSACEA 685
Query: 169 YKTNEFCCTNGQG---TCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
+ + ++CC+ G TC P+ +S+ FK+ C +YSY DD TSTFTC + + Y + FCP
Sbjct: 686 FGSPQYCCSGAYGSPTTCKPSPYSQIFKNACPRAYSYAYDDKTSTFTCASAAAYTITFCP 865
>TC204396 similar to GB|AAC36740.1|3643249|AF090143 thaumatin-like protein
precursor Mdtl1 {Malus x domestica;} , partial (92%)
Length = 1028
Score = 166 bits (420), Expect = 9e-42
Identities = 92/236 (38%), Positives = 119/236 (49%), Gaps = 20/236 (8%)
Frame = +2
Query: 10 LLMLTASLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNAGTAM----- 64
L +L A L A N C YTVW G + + LG A ++
Sbjct: 68 LCLLFAFLFYAAEGAKVSFNNKCTYTVWPGTLTGDQKPQLSTTGFELGPGASNSVDLPSP 247
Query: 65 --ARIWGRTGCNFDGAGRGRCQTGDCTGG-LNCQGWG-VPPNTLAEFALNQYGNQDFYDI 120
R W RTGC+ + GR C T DC G + C G G +PP TL E + G QDFYD+
Sbjct: 248 WSGRFWARTGCS-NNNGRFSCATADCASGQVACNGAGAIPPATLVEITVAANGGQDFYDV 424
Query: 121 SLVDGFNIPMDFFPLNGG--CHKISCTADINGQCPNELRAPGG------CNNPCTVYKTN 172
S VDGFN+PM P G C SC +IN CP EL+ G C + C +K +
Sbjct: 425 SNVDGFNVPMSVTPQGGSGDCKTSSCPKNINSVCPAELQVKGSDGNVIACKSACEAFKED 604
Query: 173 EFCCT---NGQGTCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
+CCT N TC PTN+S+ F+++C D+YSY DD +STFTC +Y + FCP
Sbjct: 605 RYCCTGPNNTAETCPPTNYSQIFEEQCPDAYSYAYDDKSSTFTCSNRPDYAITFCP 772
>TC205652 similar to UP|TLPH_ARATH (P50699) Thaumatin-like protein precursor,
partial (85%)
Length = 695
Score = 152 bits (384), Expect = 1e-37
Identities = 84/227 (37%), Positives = 114/227 (50%), Gaps = 20/227 (8%)
Frame = +1
Query: 6 LSSLLLMLTASLVTLTRAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLGVNAGTAM- 64
L+++ + T V+ + + F N CP+ VW P G+ + + L N ++
Sbjct: 25 LTTIFFLFTVLKVSASSSVIF--YNKCPHPVWPGIQPSAGKPVLARGGFKLAPNRAYSLQ 198
Query: 65 ------ARIWGRTGCNFDGAGRGRCQTGDCTGGLNCQG-WGVPPNTLAEFALNQYGNQDF 117
R WGR GC FD GRGRC TGDC G L C G G PP TLAE L QDF
Sbjct: 199 LPALWSGRFWGRHGCAFDVGGRGRCATGDCGGSLFCNGIGGSPPATLAELTLG--NEQDF 372
Query: 118 YDISLVDGFNIPMDFFPLNGG--CHKISCTADINGQCPNELRAPG-------GCNNPCTV 168
YD+SLVDG+N+P+ P G C C +D+N CP L+ C + C+
Sbjct: 373 YDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNTMCPVGLQVRSRDNKRVVACKSACSA 552
Query: 169 YKTNEFCCTNGQGT---CGPTNFSRFFKDRCHDSYSYPQDDPTSTFT 212
+ + ++CCT G+ C PT +S+ FK C + SY DDPTS T
Sbjct: 553 FNSPKYCCTGSYGSPQACKPTVYSKIFKTACPKANSYAYDDPTSIAT 693
>TC228763 similar to GB|AAP13435.1|30023804|BT006327 At1g20030 {Arabidopsis
thaliana;} , partial (69%)
Length = 699
Score = 149 bits (376), Expect(2) = 2e-36
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 17/177 (9%)
Frame = +2
Query: 66 RIWGRTGCNFDG-AGRGRCQTGDC-TGGLNCQGWGV-PPNTLAEFALNQYGNQDFYDISL 122
R WGRT C+ D +G+ C TGDC +G L C G G PP TLAEF L+ G DF+D+SL
Sbjct: 137 RFWGRTLCSQDSTSGKFSCVTGDCGSGKLECSGNGAAPPATLAEFTLDGAGGLDFFDVSL 316
Query: 123 VDGFNIPMDFFPLNGG---CHKISCTADINGQCPNELRAPGG--------CNNPCTVYKT 171
VDG+N+PM P G C C D+NG CP+EL+ G C + C + +
Sbjct: 317 VDGYNVPMLVVPQGGSGEKCSATGCVGDLNGACPSELKVMSGDGREGVVACKSACEAFNS 496
Query: 172 NEFCCTNGQG---TCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
++CC+ G TC +++S FK C +YSY DD TSTFTC A ++Y + FCP
Sbjct: 497 PQYCCSGAYGTPDTCKSSSYSEIFKSACPRAYSYAYDDKTSTFTC-ASADYTITFCP 664
Score = 20.8 bits (42), Expect(2) = 2e-36
Identities = 7/16 (43%), Positives = 7/16 (43%)
Frame = +1
Query: 30 NNCPYTVWAAASPGGG 45
N C YTVW G
Sbjct: 7 NKCEYTVWPGILSNAG 54
>TC227925 similar to UP|OLP1_LYCES (Q41350) Osmotin-like protein precursor,
partial (88%)
Length = 1035
Score = 140 bits (354), Expect = 4e-34
Identities = 86/245 (35%), Positives = 119/245 (48%), Gaps = 24/245 (9%)
Frame = +1
Query: 4 LTLSSLLLMLTASLVTLTRAANFEIVNNCPYTVWAAASP--------GGGRRLDRGQTWN 55
L L SLL++ + + T A +VNNC YTVW P GGG L +
Sbjct: 37 LFLCSLLILAVTTFSSPTGALILTLVNNCNYTVWPGIQPNAGHPVLAGGGLTLRSLTHQS 216
Query: 56 LGVNAGTAMARIWGRTGCNFDGAGRGRCQTGDCTGGLNCQG-WGVPPNTLAEFALNQYGN 114
+ V R+W RTGC++ G C +GDC G L C G G P TLA+ ++ +G+
Sbjct: 217 IPVPDAHWSGRVWARTGCSYSGTAFS-CASGDCGGRLQCNGAGGAAPATLAQLEVH-HGS 390
Query: 115 QDF--YDISLVDGFNIPMDFFPLNGG--CHKISCTADINGQCPNEL--RAPGG------C 162
D+ Y +SLVDGFN+PM F P G C + C D+ CP L R P G C
Sbjct: 391 NDYASYGVSLVDGFNVPMTFTPHEGKGVCPVVGCRNDLLATCPRVLQHRVPAGHGPVVAC 570
Query: 163 NNPCTVYKTNEFCCTN---GQGTCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNY 219
+ C + T+E CC N TC + +S FFK C ++++ D P+ C +
Sbjct: 571 KSGCEAFHTDELCCRNHFNNPNTCKGSIYSSFFKHACPATFTFAHDTPSLMHQCSSPREL 750
Query: 220 KVVFC 224
KV+FC
Sbjct: 751 KVIFC 765
>TC228762 similar to GB|AAP13435.1|30023804|BT006327 At1g20030 {Arabidopsis
thaliana;} , partial (43%)
Length = 1251
Score = 124 bits (310), Expect = 5e-29
Identities = 60/140 (42%), Positives = 80/140 (56%), Gaps = 14/140 (10%)
Frame = +2
Query: 100 PPNTLAEFALNQYGNQDFYDISLVDGFNIPMDFFPLNGG---CHKISCTADINGQCPNEL 156
PP TLAEF L+ G DF+D+SLVDG+N+PM P G C C D+NG CP+EL
Sbjct: 8 PPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVVPQGGSGEKCTATGCVGDLNGACPSEL 187
Query: 157 RAPG--------GCNNPCTVYKTNEFCCTNGQG---TCGPTNFSRFFKDRCHDSYSYPQD 205
+ G C + C + + ++CC+ G TC P+ +S FK C +YSY D
Sbjct: 188 KVMGADGREGVVACKSACEAFNSPQYCCSGAYGTPDTCKPSAYSAIFKSACPRAYSYAYD 367
Query: 206 DPTSTFTCPAGSNYKVVFCP 225
D TSTFTC A ++Y + FCP
Sbjct: 368 DKTSTFTC-ASADYTITFCP 424
>TC209980 similar to UP|TP1B_MALDO (P83336) Thaumatin-like protein 1b
(Pathogenesis-related protein 5b) (PR-5b) (Fragment),
partial (65%)
Length = 927
Score = 122 bits (306), Expect = 1e-28
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 13/140 (9%)
Frame = +3
Query: 99 VPPNTLAEFALNQYGNQDFYDISLVDGFNIPMDFFPLNGG--CHKISCTADIN--GQCPN 154
+PP TL E + G QDFYD+S VDGFN+P+ P G C SC +IN CP+
Sbjct: 15 IPPATLVEITVAPNGGQDFYDVSNVDGFNVPVSITPQGGSGECKTSSCPNNINDVNVCPS 194
Query: 155 ELRAPGG------CNNPCTVYKTNEFCCTNG---QGTCGPTNFSRFFKDRCHDSYSYPQD 205
EL+ G CN+ C + +++CC + TC PTN+S+ +++C D+YSY D
Sbjct: 195 ELQVKGSDGNVIACNSACVAFNEDQYCCRGDYDTEETCPPTNYSQIVEEQCPDAYSYAYD 374
Query: 206 DPTSTFTCPAGSNYKVVFCP 225
D +STFTC G +Y ++FCP
Sbjct: 375 DKSSTFTCFNGPDYAIIFCP 434
>TC231432 weakly similar to UP|Q9CA24 (Q9CA24) Thaumatin-like protein;
12104-13574, partial (35%)
Length = 761
Score = 111 bits (278), Expect = 3e-25
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Frame = +3
Query: 94 CQGWGVPPNTLAEFALNQYGNQDFYDISLVDGFNIPMDFFPLNG--GCHKISCTADINGQ 151
C G PP T A+F L G DFYD+SLVDGFN+P+ +NG C + C D+
Sbjct: 3 CTVPGSPPATSADFTL---GEPDFYDVSLVDGFNLPIVVKAINGTGNCSTVGCDGDLRQN 173
Query: 152 CPNELRAPGG-----CNNPCTVYKTNEFCCTNGQG---TCGPTNFSRFFKDRCHDSYSYP 203
CP+EL + C + C V+ T+E+CC G TC +N+S+ FK C +YS+
Sbjct: 174 CPSELASKDNDKVIACRSACDVFNTDEYCCRGTYGNPATCLASNYSKIFKQVCPAAYSFA 353
Query: 204 QDDPTSTFTCPAGSNYKVVFC 224
DDPTS TC + +N+ V+FC
Sbjct: 354 LDDPTSLITC-SKANFVVIFC 413
>TC212209 similar to UP|O22973 (O22973) Thaumatin isolog, partial (42%)
Length = 668
Score = 103 bits (258), Expect = 5e-23
Identities = 54/120 (45%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Frame = +1
Query: 123 VDGFNIPM--DFFPLNGGCHKISCTADINGQCPNELRAPGG--CNNPCTVYKTNEFCCT- 177
VDG+N+PM D G C C AD+N +CP ELR GG C + C + EFCC+
Sbjct: 1 VDGYNLPMMVDXSGGXGXCAATGCGADLNRRCPAELRVDGGDACQSACRAFGKPEFCCSG 180
Query: 178 --NGQGTCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCPLGSPHVTLMM 235
N C P+ +S+ FK C SYSY DD TSTFTC A ++Y V FCP SP + +M
Sbjct: 181 AFNSPAACAPSMYSQIFKAACPKSYSYAFDDATSTFTCTA-ADYTVTFCPFSSPSLKSLM 357
>TC222077 similar to PIR|T05493|T05493 pathogenesis-related protein 19K4.140
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(22%)
Length = 948
Score = 103 bits (257), Expect = 7e-23
Identities = 60/170 (35%), Positives = 85/170 (49%), Gaps = 10/170 (5%)
Frame = +2
Query: 66 RIWGRTGCNFDGAGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNQDFYDISLVDG 125
R+WGRT C+++ G C TGDC G P TLAEF LN G D++D+SLVDG
Sbjct: 5 RLWGRTLCSYNITGSFTCVTGDCISSTVECGGATAPVTLAEFTLNGTGGLDYFDVSLVDG 184
Query: 126 FNIPMDFFPLNG----GCHKISCTADINGQCPNELR------APGGCNNPCTVYKTNEFC 175
FN+P+ P + C C ++N +CP EL+ GC + C V++
Sbjct: 185 FNLPLVVEPRSAIGAENCRATGCRRNLNKKCPVELQVIKEGEGVVGCKSSCEVHEP---- 352
Query: 176 CTNGQGTCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
C+N FS F K RC D+Y ++FTC +++ + FCP
Sbjct: 353 CSNNSNL-----FSHFLKTRCPDAYH------NASFTC-VXADFTITFCP 466
>TC220668 similar to UP|Q9MB90 (Q9MB90) Thaumatin-like protein (Fragment),
partial (66%)
Length = 493
Score = 97.1 bits (240), Expect = 7e-21
Identities = 48/118 (40%), Positives = 65/118 (54%), Gaps = 11/118 (9%)
Frame = +1
Query: 119 DISLVDGFNIPMDFFPLNG--GCHKISCTADINGQCPNELRAPGG------CNNPCTVYK 170
D+SLVDG+N+ + G C C+ D+N CP EL+ G C + C +
Sbjct: 10 DVSLVDGYNVGVGVRATGGTGDCKYAGCSEDLNAACPAELQVKDGGGEVVACKSACAAFN 189
Query: 171 TNEFCCTNGQG---TCGPTNFSRFFKDRCHDSYSYPQDDPTSTFTCPAGSNYKVVFCP 225
T EFCCT TC PT +S+ FK+ C +YSY DDP+S TC +GS+Y + FCP
Sbjct: 190 TAEFCCTGDHSSPQTCSPTLYSKIFKNACPAAYSYAYDDPSSICTC-SGSDYVITFCP 360
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.140 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,167,020
Number of Sequences: 63676
Number of extensions: 267514
Number of successful extensions: 1336
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of query: 243
length of database: 12,639,632
effective HSP length: 95
effective length of query: 148
effective length of database: 6,590,412
effective search space: 975380976
effective search space used: 975380976
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0304.6