BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0301c.1
(229 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215389 similar to UP|Q9ZR85 (Q9ZR85) Ethylene-responsive eleme... 299 8e-82
TC215390 similar to UP|Q9ZR83 (Q9ZR83) EREBP-3 homolog, partial ... 295 1e-80
TC219340 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 167 4e-42
TC214134 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 166 8e-42
TC204035 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 164 2e-41
TC214121 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive eleme... 162 1e-40
TC214126 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 162 2e-40
TC214297 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive eleme... 158 2e-39
BE803909 weakly similar to GP|4099921|gb|A EREBP-3 homolog {Styl... 117 6e-27
TC205829 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive eleme... 114 3e-26
TC226783 similar to UP|ERF3_ARATH (O80339) Ethylene responsive e... 114 3e-26
TC226782 homologue to UP|ERF3_ARATH (O80339) Ethylene responsive... 114 4e-26
TC226092 homologue to UP|ERF3_ARATH (O80339) Ethylene responsive... 110 5e-25
TC205830 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive eleme... 110 5e-25
TC204740 similar to UP|Q40478 (Q40478) Ethylene-responsive eleme... 108 3e-24
TC217288 homologue to GB|AAS76737.1|45773866|BT012250 At5g13330 ... 105 2e-23
TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, p... 101 3e-22
TC228091 similar to GB|AAM52243.1|21464577|AY120700 AT4g34410/F1... 99 1e-21
TC219209 similar to GB|BAA95736.1|7939533|AB025608 Nicotiana ERE... 98 3e-21
CF806953 98 3e-21
>TC215389 similar to UP|Q9ZR85 (Q9ZR85) Ethylene-responsive element binding
protein homolog, partial (62%)
Length = 1172
Score = 299 bits (765), Expect = 8e-82
Identities = 171/238 (71%), Positives = 181/238 (75%), Gaps = 9/238 (3%)
Frame = +3
Query: 1 MAPRD-KTNAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD 59
MAPRD KT+ K NGNGN GVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD
Sbjct: 138 MAPRDHKTSNAKA----NGNGNSGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD 305
Query: 60 TAEEAARAYDTAAREFRGPKAKTNFPFPSDNVKNQSPSQSSTVESSSRDRDVAAAADSSS 119
TAEEAARAYD AAREFRGPKAKTNFP P +NVKN SPSQSSTVESSSRDRDV AADSS
Sbjct: 306 TAEEAARAYDAAAREFRGPKAKTNFPLPLENVKNSSPSQSSTVESSSRDRDV--AADSSP 479
Query: 120 LDLNLAP----SVRFPFRPQFP----QMPAANQVLFFDAILRAGMVGGSPASQRYGFDFH 171
LDLNLAP S RFPF+ QFP +PAANQVL+FDA+LRAGM G GF F
Sbjct: 480 LDLNLAPAAAASARFPFQHQFPVFTGAVPAANQVLYFDAVLRAGMAGPR------GFAFG 641
Query: 172 TYNHPVAASEIQAVAGAQSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPPMEDMA 229
+HPVAASE A SDSDSSSVIDLNH E G V G R FDLDLN+PP ++A
Sbjct: 642 YNHHPVAASEFHATT---SDSDSSSVIDLNHNE-GEVKGNGSRIFDLDLNHPPPHEIA 803
>TC215390 similar to UP|Q9ZR83 (Q9ZR83) EREBP-3 homolog, partial (76%)
Length = 975
Score = 295 bits (755), Expect = 1e-80
Identities = 167/237 (70%), Positives = 180/237 (75%), Gaps = 8/237 (3%)
Frame = +3
Query: 1 MAPRDKTNAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 60
MAPRDKT+AVK SGN GVK++HFRGVRKRPWGR+AAEIRDP KK+RVWLGTFDT
Sbjct: 21 MAPRDKTSAVKPSGNA------GVKDLHFRGVRKRPWGRFAAEIRDPAKKTRVWLGTFDT 182
Query: 61 AEEAARAYDTAAREFRGPKAKTNFPFPSDNVKNQSPSQSSTVESSSRDRDVAAAADSSSL 120
AEEAARAYD AAREFRGPKAKTNFP PS+N KN SPSQSSTVESSSRDRDV AADSS L
Sbjct: 183 AEEAARAYDAAAREFRGPKAKTNFPLPSENFKNASPSQSSTVESSSRDRDV--AADSSPL 356
Query: 121 DLNLAP----SVRFPFRPQFP----QMPAANQVLFFDAILRAGMVGGSPASQRYGFDFHT 172
DLNLAP S RFPFR QFP +PAANQV++FDA+LRAGM G GF F
Sbjct: 357 DLNLAPVAVSSARFPFRNQFPVFPGAVPAANQVMYFDAVLRAGMAGPR------GFAFGY 518
Query: 173 YNHPVAASEIQAVAGAQSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPPMEDMA 229
HPVAASE A SDSDSSSVIDLNH E GVV G R FDLDLN+PP ++A
Sbjct: 519 NPHPVAASEYHATT---SDSDSSSVIDLNHNE-GVVKGNGSRMFDLDLNHPPPHEIA 677
>TC219340 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (42%)
Length = 875
Score = 167 bits (423), Expect = 4e-42
Identities = 116/231 (50%), Positives = 133/231 (57%), Gaps = 2/231 (0%)
Frame = +2
Query: 1 MAPRD--KTNAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTF 58
MAPRD ++N V V+G N KE+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTF
Sbjct: 59 MAPRDINRSNVVVVAGVSNPTH----KEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTF 226
Query: 59 DTAEEAARAYDTAAREFRGPKAKTNFPFPSDNVKNQSPSQSSTVESSSRDRDVAAAADSS 118
DTAEEAARAYDTAAREFRG KAKTN FP+ +SPSQSST++SSS
Sbjct: 227 DTAEEAARAYDTAAREFRGTKAKTN--FPTHAAAARSPSQSSTLDSSS----------PP 370
Query: 119 SLDLNLAPSVRFPFRPQFPQMPAANQVLFFDAILRAGMVGGSPASQRYGFDFHTYNHPVA 178
LDL LA + F P A V+FFDA RA + R FD PVA
Sbjct: 371 PLDLTLAAPLTAAGALVF---PVARPVVFFDAFARAEV--------RASFDL-----PVA 502
Query: 179 ASEIQAVAGAQSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPPMEDMA 229
A SDSDSSSV+D V+ DLDLN PP ++A
Sbjct: 503 AF---------SDSDSSSVVDYERVPHRKVL-------DLDLNVPPPPEVA 607
>TC214134 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (43%)
Length = 1032
Score = 166 bits (420), Expect = 8e-42
Identities = 111/232 (47%), Positives = 131/232 (55%), Gaps = 3/232 (1%)
Frame = +3
Query: 1 MAPRDKTNAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 60
MAPRD + A +G G G KE+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT
Sbjct: 99 MAPRD-SRATAFAGPGPGPSPAH-KEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT 272
Query: 61 AEEAARAYDTAAREFRGPKAKTNFPFPSDNVKN---QSPSQSSTVESSSRDRDVAAAADS 117
AEEAARAYDTAAREFRG KAKTNFP PS+ + N +SPSQSST++SSS +
Sbjct: 273 AEEAARAYDTAAREFRGAKAKTNFPTPSELILNNNIRSPSQSSTLDSSS------PPSPP 434
Query: 118 SSLDLNLAPSVRFPFRPQFPQMPAANQVLFFDAILRAGMVGGSPASQRYGFDFHTYNHPV 177
LDL L P P A VLFFDA RA + + GF
Sbjct: 435 PPLDLTLT-----PLSVAVTVFPVARPVLFFDAFARADAMIAVSRREMCGF--------- 572
Query: 178 AASEIQAVAGAQSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPPMEDMA 229
E A ++DSDS Y V++ DLDLN PP+ ++A
Sbjct: 573 ---ERPAADFRRNDSDSD-------YNRRVLL-------DLDLNVPPLPEVA 677
>TC204035 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (37%)
Length = 1004
Score = 164 bits (416), Expect = 2e-41
Identities = 116/233 (49%), Positives = 137/233 (58%), Gaps = 4/233 (1%)
Frame = +1
Query: 1 MAPRD--KTNAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTF 58
MAPRD ++N V G+ N KE+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTF
Sbjct: 157 MAPRDINRSNVVVAGGS-----NPTRKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTF 321
Query: 59 DTAEEAARAYDTAAREFRGPKAKTNFPFPSD--NVKNQSPSQSSTVESSSRDRDVAAAAD 116
DTAEEAARAYD AAREFRG KAKTNFP ++ + +SPSQSST++SSS
Sbjct: 322 DTAEEAARAYDAAAREFRGAKAKTNFPTHAELTHAAARSPSQSSTLDSSS--------PP 477
Query: 117 SSSLDLNLAPSVRFPFRPQFPQMPAANQVLFFDAILRAGMVGGSPASQRYGFDFHTYNHP 176
+ LDL LA + F P A V+FFDA RA + R FD P
Sbjct: 478 TPPLDLTLAAPLAAGGALVF---PVARPVVFFDAFERAEV--------RASFDL-----P 609
Query: 177 VAASEIQAVAGAQSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPPMEDMA 229
VAA SDSDSS+V+D YE G + R DLDLN PP ++A
Sbjct: 610 VAAF---------SDSDSSTVMD---YERG----SRRRVLDLDLNVPPPPEVA 720
>TC214121 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
factor 4-like protein, partial (50%)
Length = 965
Score = 162 bits (410), Expect = 1e-40
Identities = 107/239 (44%), Positives = 131/239 (54%), Gaps = 18/239 (7%)
Frame = +3
Query: 4 RDKTNAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE 63
++K N V + N N + E+HFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAE+
Sbjct: 48 KEKKNVVVKNKKPNNNAD----ELHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAED 215
Query: 64 AARAYDTAAREFRGPKAKTNFPFPSD---------------NVKNQSPSQSSTVESSSRD 108
AARAYD AAR FRGPKAKTNFP P D NVK+ SPSQSSTVES++ +
Sbjct: 216 AARAYDAAARNFRGPKAKTNFPVPPDDNNNNNVNVNKNKSVNVKSHSPSQSSTVESATPE 395
Query: 109 RDVAAAADSSSLDLNLAPSVRFPFRPQFPQMPAANQVLFFDAILRAGMVGGSPASQRYGF 168
R+ + S+++D RFPF +P Q+L + +P +
Sbjct: 396 REATRRSTSAAID-------RFPF------LPIQQQILMTHPV-------AAPMRPVFFL 515
Query: 169 D---FHTYNHPVAASEIQAVAGAQSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPP 224
D F T + P+ QSDSDSSSV VV R +LDLN P
Sbjct: 516 DRAHFMTQSFPLRFEP----GPVQSDSDSSSV---------VVDCQPKRELNLDLNLAP 653
>TC214126 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (36%)
Length = 989
Score = 162 bits (409), Expect = 2e-40
Identities = 109/235 (46%), Positives = 129/235 (54%), Gaps = 6/235 (2%)
Frame = +2
Query: 1 MAPRDKTNAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 60
MAPRD + A + G G KE+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT
Sbjct: 83 MAPRD-SRATALIGPGPSLSPAH-KEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDT 256
Query: 61 AEEAARAYDTAAREFRGPKAKTNFPFPSD------NVKNQSPSQSSTVESSSRDRDVAAA 114
AEEAARAYDTAAREFRG KAKTNFP PS+ N+ +SPSQ+ST++SSS
Sbjct: 257 AEEAARAYDTAAREFRGAKAKTNFPTPSELILNNNNINARSPSQTSTLDSSS-------P 415
Query: 115 ADSSSLDLNLAPSVRFPFRPQFPQMPAANQVLFFDAILRAGMVGGSPASQRYGFDFHTYN 174
LDL L P F P A VLFFDA RA + + GF
Sbjct: 416 PPPPPLDLTLTPLSSAVF-------PVARPVLFFDAFARADTMVAVSRRETCGF------ 556
Query: 175 HPVAASEIQAVAGAQSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPPMEDMA 229
E A + DSDS Y +++ DLDLN PP+ ++A
Sbjct: 557 ------ERPAADFRRGDSDSD-------YNRRILL-------DLDLNVPPLPEVA 661
>TC214297 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
factor 4-like protein, partial (51%)
Length = 996
Score = 158 bits (400), Expect = 2e-39
Identities = 105/216 (48%), Positives = 120/216 (54%), Gaps = 17/216 (7%)
Frame = +3
Query: 26 EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNFP 85
EVHFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAE+AARAYD AAR FRGPKAKTNFP
Sbjct: 114 EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEDAARAYDVAARNFRGPKAKTNFP 293
Query: 86 FPSD--------------NVKNQSPSQSSTVESSSRDRDVAAAADSSSLDLNLAPSVRFP 131
F D NVK+ SPSQSSTVESS+ +R+ A +++D RFP
Sbjct: 294 FLPDNNTNVNLNKKNNNVNVKSDSPSQSSTVESSTPEREFTRRAAPAAMD-------RFP 452
Query: 132 FRPQFPQMPAANQVLFFDAILRAGMVGGSPASQRYGFD---FHTYNHPVAASEIQAVAGA 188
F +P Q+L + +P Y D F T P+
Sbjct: 453 F------LPIQQQILVTHPV--------APMRPVYFLDRAHFMTQPFPLRFEP----GPV 578
Query: 189 QSDSDSSSVIDLNHYESGVVIKAGGRNFDLDLNYPP 224
QSDSDSSSV VV R +LDLN P
Sbjct: 579 QSDSDSSSV---------VVDCQPKRELNLDLNLAP 659
>BE803909 weakly similar to GP|4099921|gb|A EREBP-3 homolog {Stylosanthes
hamata}, partial (20%)
Length = 349
Score = 117 bits (292), Expect = 6e-27
Identities = 69/116 (59%), Positives = 80/116 (68%), Gaps = 8/116 (6%)
Frame = +2
Query: 51 SRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNFPFPSDNVKNQSPSQSSTVESSSRDRD 110
SRVW+G+FD+AEEAA AY A+RE GPKAKT+ P ++ KN SP QS TV S SR RD
Sbjct: 2 SRVWVGSFDSAEEAAGAYYAASREIYGPKAKTDCPLSLEDDKNCSPIQSRTVVSFSRYRD 181
Query: 111 VAAAADSSSLDLNLAP----SVRFPFRPQFP----QMPAANQVLFFDAILRAGMVG 158
DSS+LDLNLAP S RFPFR Q P +PAANQ +FDA+LRAGM G
Sbjct: 182 --DGVDSSALDLNLAPAAAASSRFPFRHQLPGFTGAVPAANQGAYFDAVLRAGMAG 343
>TC205829 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive element binding
factor, partial (52%)
Length = 1040
Score = 114 bits (286), Expect = 3e-26
Identities = 55/73 (75%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
Frame = +1
Query: 25 KEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNF 84
KE FRGVRKRPWGR+AAEIRDP KK RVWLGTFD+AE+AARAYD AAR FRGPKAKTNF
Sbjct: 196 KETRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDKAARSFRGPKAKTNF 375
Query: 85 PF---PSDNVKNQ 94
P P+D+ +Q
Sbjct: 376 PSFPGPTDHHSSQ 414
>TC226783 similar to UP|ERF3_ARATH (O80339) Ethylene responsive element
binding factor 3 (AtERF3), partial (48%)
Length = 1287
Score = 114 bits (286), Expect = 3e-26
Identities = 64/112 (57%), Positives = 69/112 (61%), Gaps = 22/112 (19%)
Frame = +2
Query: 25 KEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNF 84
KE +RGVRKRPWGR+AAEIRDP KK+RVWLGTFDTAEEAARAYDTAAR RGPKAKTNF
Sbjct: 518 KEQRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDTAEEAARAYDTAARTLRGPKAKTNF 697
Query: 85 PFP----------------------SDNVKNQSPSQSSTVESSSRDRDVAAA 114
P D+ + S SSTVES S R A
Sbjct: 698 PLSPPFYHPDPFSDHRHFANTGEDFHDHRRPTSSGMSSTVESFSGPRAAVPA 853
>TC226782 homologue to UP|ERF3_ARATH (O80339) Ethylene responsive element
binding factor 3 (AtERF3), partial (48%)
Length = 1194
Score = 114 bits (285), Expect = 4e-26
Identities = 64/114 (56%), Positives = 69/114 (60%), Gaps = 24/114 (21%)
Frame = +3
Query: 25 KEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNF 84
KE +RGVRKRPWGR+AAEIRDP KK+RVWLGTFDTAEEAARAYDTAAR RGPKAKTNF
Sbjct: 405 KEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDTAEEAARAYDTAARTLRGPKAKTNF 584
Query: 85 PFP------------------------SDNVKNQSPSQSSTVESSSRDRDVAAA 114
P D+ + S SSTVES S R A
Sbjct: 585 PLSPPFYHPDPFSDHRYFDGAGAGEDFQDHRRPTSSGMSSTVESFSGPRAAVPA 746
>TC226092 homologue to UP|ERF3_ARATH (O80339) Ethylene responsive element
binding factor 3 (AtERF3), partial (48%)
Length = 884
Score = 110 bits (275), Expect = 5e-25
Identities = 52/66 (78%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 21 NGGV-KEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPK 79
NG + KE +RGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AE+AARAYD AAR RGPK
Sbjct: 312 NGSILKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEDAARAYDAAARTLRGPK 491
Query: 80 AKTNFP 85
AKTNFP
Sbjct: 492 AKTNFP 509
>TC205830 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive element binding
factor, partial (61%)
Length = 1103
Score = 110 bits (275), Expect = 5e-25
Identities = 52/60 (86%), Positives = 55/60 (91%), Gaps = 1/60 (1%)
Frame = +1
Query: 29 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNF-PFP 87
FRGVRKRPWGR+AAEIRDP KK RVWLGTFD+AE+AARAYD AAR FRGPKAKTNF PFP
Sbjct: 169 FRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDKAARSFRGPKAKTNFPPFP 348
>TC204740 similar to UP|Q40478 (Q40478) Ethylene-responsive element binding
protein, partial (26%)
Length = 1370
Score = 108 bits (269), Expect = 3e-24
Identities = 59/102 (57%), Positives = 69/102 (66%), Gaps = 3/102 (2%)
Frame = +1
Query: 8 NAVKVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAAR 66
N V S + N + H+RGVR+RPWG+YAAEIRDP +K SRVWLGTFDTA EAA+
Sbjct: 478 NQVSSSSFSSDETNNTKDDKHYRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTAIEAAK 657
Query: 67 AYDTAAREFRGPKAKTNFPFP--SDNVKNQSPSQSSTVESSS 106
AYD AA + RG KA NFP SD K +S S SS+V SSS
Sbjct: 658 AYDKAAFKMRGSKAILNFPLEIGSDQSKEESSSSSSSVSSSS 783
>TC217288 homologue to GB|AAS76737.1|45773866|BT012250 At5g13330 {Arabidopsis
thaliana;} , partial (33%)
Length = 1315
Score = 105 bits (262), Expect = 2e-23
Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Frame = +3
Query: 20 GNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPK 79
G +++ H+RGVR+RPWG++AAEIRDP K +RVWLGTFDTAE AA AYD AA F+G K
Sbjct: 462 GIDDIRKKHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAMAYDAAALRFKGNK 641
Query: 80 AKTNFPF-------PSDNVKNQSPSQSSTVESSSRDRDVAAAADSSSLDLNLAPSV 128
AK NFP P N N + S + T +SSS + ++SSL P++
Sbjct: 642 AKLNFPERVVMPIPPQTNNNNSTSSSAPTTQSSSSLPPPQSLHNNSSLSAEGFPNL 809
>TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, partial (31%)
Length = 1156
Score = 101 bits (251), Expect = 3e-22
Identities = 53/109 (48%), Positives = 67/109 (60%), Gaps = 2/109 (1%)
Frame = +2
Query: 11 KVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDT 70
K S + G ++ +RG+R+RPWG++AAEIRDP K RVWLGTF TAEEAARAYD
Sbjct: 323 KKSVSAEKKSGGRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTAEEAARAYDD 502
Query: 71 AAREFRGPKAKTNFP--FPSDNVKNQSPSQSSTVESSSRDRDVAAAADS 117
AA+ RG KAK NFP P + K + S +T E SS + + S
Sbjct: 503 AAKRIRGDKAKLNFPATAPPPSKKQRCLSPDTTTEQSSSSQSTTGSTGS 649
>TC228091 similar to GB|AAM52243.1|21464577|AY120700 AT4g34410/F10M10_180
{Arabidopsis thaliana;} , partial (30%)
Length = 1025
Score = 99.4 bits (246), Expect = 1e-21
Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Frame = +1
Query: 29 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNFPFPS 88
+RGVR+RPWG++AAEIRDP + +RVWLGTF TAE+AARAYD AA EFRGP+AK NFP
Sbjct: 358 YRGVRQRPWGKWAAEIRDPRRAARVWLGTFGTAEDAARAYDKAAIEFRGPRAKLNFPLVD 537
Query: 89 DN--VKNQSPSQSSTVESSSRDRDVAAAADSSS 119
++ ++ P + T E + ++ + S
Sbjct: 538 ESLTLQQSEPERVQTEEEQIKTENLNQGMEMDS 636
>TC219209 similar to GB|BAA95736.1|7939533|AB025608 Nicotiana EREBP-3-like
protein {Arabidopsis thaliana;} , partial (45%)
Length = 781
Score = 98.2 bits (243), Expect = 3e-21
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
Frame = +2
Query: 11 KVSGNGNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAARAYD 69
K+ G + NG V EV +RG+R+RPWG++AAEIRDP +K +R+WLGTFDTAE+AARAYD
Sbjct: 95 KMEGGRSSVSNGNV-EVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYD 271
Query: 70 TAAREFRGPKAKTNFP--FPSDNVKNQSP 96
AA FRG +A NFP + S N + P
Sbjct: 272 AAAFHFRGHRAILNFPNEYQSHNPNSSLP 358
>CF806953
Length = 666
Score = 98.2 bits (243), Expect = 3e-21
Identities = 50/81 (61%), Positives = 60/81 (73%)
Frame = +3
Query: 16 GNGNGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREF 75
GN +G GG + +RGVR+RPWG++AAEIRDP K +RVWLGTFDTAE AARAYD AA F
Sbjct: 357 GNESG-GGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRF 533
Query: 76 RGPKAKTNFPFPSDNVKNQSP 96
RG +AK NF ++NV P
Sbjct: 534 RGNRAKLNF---AENVVQVQP 587
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,755,381
Number of Sequences: 63676
Number of extensions: 109862
Number of successful extensions: 879
Number of sequences better than 10.0: 208
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of query: 229
length of database: 12,639,632
effective HSP length: 94
effective length of query: 135
effective length of database: 6,654,088
effective search space: 898301880
effective search space used: 898301880
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0301c.1