BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0276.7
(180 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG363504 similar to PIR|T07622|T076 extensin homolog - soybean (... 51 3e-07
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 37 2e-06
TC204079 similar to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding ... 40 4e-05
BM527948 weakly similar to GP|397687|gb|AA ipiB2 {Phytophthora i... 38 6e-05
TC208205 hydroxyproline-rich glycoprotein 33 9e-05
BG507592 similar to PIR|S52985|S52 cell wall protein - alfalfa, ... 42 1e-04
TC234725 similar to UP|RFX1_HUMAN (P22670) MHC class II regulato... 42 1e-04
TC215070 similar to UP|Q40336 (Q40336) Proline-rich cell wall pr... 42 1e-04
TC206524 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 39 2e-04
TC210023 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 ... 37 2e-04
TC231868 similar to UP|Q93424 (Q93424) C. elegans GRL-23 protein... 31 3e-04
TC213539 similar to UP|Q9LW52 (Q9LW52) Arabidopsis thaliana geno... 39 3e-04
TC228623 similar to UP|Q9SA21 (Q9SA21) F3O9.2 protein, partial (... 41 3e-04
TC215069 similar to UP|O24300 (O24300) PtxA protein precursor, p... 41 3e-04
TC204070 similar to UP|Q39835 (Q39835) Extensin, partial (34%) 41 3e-04
TC231411 similar to GB|AAP21370.1|30102904|BT006562 At3g27200 {A... 41 3e-04
TC214303 similar to UP|Q9T0K5 (Q9T0K5) Extensin-like protein, pa... 36 6e-04
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 40 6e-04
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 34 7e-04
TC209365 weakly similar to UP|Q9M6T8 (Q9M6T8) Glycine-rich prote... 30 7e-04
>BG363504 similar to PIR|T07622|T076 extensin homolog - soybean (fragment),
partial (19%)
Length = 310
Score = 51.2 bits (121), Expect = 3e-07
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Frame = -1
Query: 31 GWWRRWCW**WWWRWWRVVV--TALAVVVQ------VVAATVVVLEV------MVIMVVT 76
GWW +W WWW W RV+V T V+V V AT+VV +VI VV
Sbjct: 307 GWWSKWVLV-WWWWWTRVLVRRTRSLVLVNRWWRRWVFVATLVVAVTGSGSGKVVISVVI 131
Query: 77 LAAVEEGGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGGSV 126
+ A GGRG+ GGG +V + V +G GDDGG +
Sbjct: 130 VVATSGGGRGNVGGGND--------KDGIGDVDGSSNVGGDGGGDDGGGI 5
Score = 34.7 bits (78), Expect = 0.025
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Frame = -2
Query: 1 GGGQGSCDNND------EGDGGDGCRDGSGDTECWLGWWR-------RW--CW**WWWRW 45
GGGQG G GGDG + W WW+ RW W**WW
Sbjct: 273 GGGQGYL*GGRGHLYL*TGGGGDGYL*-----QRW--WWQ*RVVVVVRW*YQW**WWQ-- 121
Query: 46 WRVVVTALAVVVQVVAATVVVLEVMVIMVVTLAAVEE 82
VVV A +VV + +V+L V+V+ VV + + E
Sbjct: 120 -LVVVVAATLVVAMTKMVLVMLMVVVMSVVMVVVMTE 13
>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (11%)
Length = 678
Score = 37.4 bits (85), Expect(2) = 3e-05
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2
Query: 29 WLGWWRRWCW**WWWRWWR 47
W WW RW W *WW RWWR
Sbjct: 251 WR*WW*RW-WR*WW*RWWR 198
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Frame = -2
Query: 29 WLGWWRRWCW**WWWRW--WR 47
W WW W W WWW W WR
Sbjct: 422 WCKWW*WWWWSQWWW*W*IWR 360
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 21/75 (28%), Positives = 25/75 (33%)
Frame = -3
Query: 83 GGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSGDSEGD 142
GG GD G GG G+G GG V G G+
Sbjct: 364 GGEGDGGKGGG------------------------GDGGKGGGVDSGIGGGKGGGGDGGN 257
Query: 143 NGGDNDNDGGDSDGG 157
GG + +GG DGG
Sbjct: 256 GGGGDGGNGGGGDGG 212
Score = 33.1 bits (74), Expect(2) = 3e-04
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 117 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 157
EG+G GG DSG G GG + +GG DGG
Sbjct: 358 EGDGGKGGGGDGGKGGGVDSGIGGGKGGGGDGGNGGGGDGG 236
Score = 32.3 bits (72), Expect(2) = 4e-04
Identities = 10/16 (62%), Positives = 12/16 (74%), Gaps = 1/16 (6%)
Frame = -2
Query: 32 WWRRWCW**WWW-RWW 46
WW +W W* WWW +WW
Sbjct: 425 WWCKW-W*WWWWSQWW 381
Score = 30.0 bits (66), Expect(2) = 0.053
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Frame = -2
Query: 29 WLGWWRRWCW*----*WWWRWWR 47
W WRR W* *WW RWWR
Sbjct: 290 WR*GWRR*WW*RWWR*WW*RWWR 222
Score = 29.3 bits (64), Expect(2) = 0.004
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 1 GGGQGSCDNNDEGDGGDGCRDGSGD 25
GGG+G + G GGDG G GD
Sbjct: 292 GGGKGGGGDGGNGGGGDGGNGGGGD 218
Score = 28.1 bits (61), Expect = 2.3
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -3
Query: 118 GEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDND-GGDSDGGW**KQ*WWRWRVVVAVVAG 176
G GG S + SG +G GG+ D GG DGG + V + + G
Sbjct: 442 GGSGGGGGASGGNGGGGASGGGDGRFGGEGDGGKGGGGDGG--------KGGGVDSGIGG 287
Query: 177 GNGG 180
G GG
Sbjct: 286 GKGG 275
Score = 27.7 bits (60), Expect = 3.1
Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 7/22 (31%)
Frame = -2
Query: 32 WWRR------WCW**WW-WRWW 46
WW R W W WW W WW
Sbjct: 458 WWDRQWG*RWWWWCKWW*WWWW 393
Score = 27.3 bits (59), Expect(2) = 4e-04
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -3
Query: 82 EGGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSGDSEG 141
+GG GD G GG V++ + +G G DGG+ + + G +G
Sbjct: 343 KGGGGDGGKGGG---------------VDSGIGGGKGGGGDGGN--GGGGDGGNGGGGDG 215
Query: 142 DNGGDNDN---DGGDSDGG 157
NGG + GG S GG
Sbjct: 214 GNGGGGASGIGGGGHSLGG 158
Score = 26.9 bits (58), Expect(2) = 3e-04
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 53 LAVVVQVVAATVVVLEVMVIMVVTLAAVE 81
+AVVV V +VV+E +V+++V LAA E
Sbjct: 438 VAVVVVVQVVVMVVVEPVVVVMVDLAAKE 352
Score = 26.9 bits (58), Expect(2) = 0.004
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 29 WLGWWRRWCW**WWWRWW 46
W WWR W W* WW W
Sbjct: 239 W*RWWR*W-W*RWWRC*W 189
Score = 26.2 bits (56), Expect(2) = 3e-05
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 1 GGGQGSCDNNDEGDGGDGCRDGSGD 25
GGG S +G GGDG G GD
Sbjct: 316 GGGVDSGIGGGKGGGGDGGNGGGGD 242
Score = 22.3 bits (46), Expect(2) = 0.053
Identities = 12/29 (41%), Positives = 14/29 (47%), Gaps = 5/29 (17%)
Frame = -3
Query: 2 GGQGSCDNNDEGDG-----GDGCRDGSGD 25
GG G + GDG GDG + G GD
Sbjct: 412 GGNGGGGASGGGDGRFGGEGDGGKGGGGD 326
>TC204079 similar to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein,
complete
Length = 748
Score = 40.0 bits (92), Expect(2) = 4e-05
Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 29 WLGWWRRWCW**WWW-RWWR 47
W+ WW RW W WWW RWWR
Sbjct: 360 WIWWWSRW-WIWWWWSRWWR 416
Score = 33.9 bits (76), Expect = 0.043
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
Frame = +3
Query: 32 WWR----RWCW**WWW-RWW 46
WWR RW W WWW RWW
Sbjct: 327 WWRWRRRRWRWWIWWWSRWW 386
Score = 30.4 bits (67), Expect = 0.47
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +3
Query: 29 WLGWWRRWCW**WWWRW-WR 47
W W RRW W W WRW WR
Sbjct: 441 WRLWRRRWIW-RWRWRWLWR 497
Score = 28.5 bits (62), Expect = 1.8
Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 9/37 (24%)
Frame = +3
Query: 29 WLGWWRR----WCW**W---WW-RW-WRVVVTALAVV 56
WL W+R W W* W WW RW WR+ L VV
Sbjct: 486 WLWRWQRPWLWWWW*PWLLSWW*RW*WRLEKLGLDVV 596
Score = 23.1 bits (48), Expect(2) = 4e-05
Identities = 11/29 (37%), Positives = 18/29 (61%)
Frame = +2
Query: 49 VVTALAVVVQVVAATVVVLEVMVIMVVTL 77
V A+A+ V VVV+ V+ ++VVT+
Sbjct: 473 VAVAVAMAVAETVVMVVVVTVVTLVVVTV 559
>BM527948 weakly similar to GP|397687|gb|AA ipiB2 {Phytophthora infestans},
partial (15%)
Length = 421
Score = 37.7 bits (86), Expect(2) = 6e-05
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 9/29 (31%)
Frame = +3
Query: 28 CWLGWWRRWCW**WW---------WRWWR 47
CW WW WCW * W W WWR
Sbjct: 126 CWYWWWITWCWC*RWITWCWCWITWCWWR 212
Score = 35.4 bits (80), Expect = 0.015
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 11/34 (32%)
Frame = +3
Query: 28 CWLGW--WRR----WCW**W-WWRW----WRVVV 50
CW+ W WR WCW W WWRW WR ++
Sbjct: 186 CWITWCWWRWITWCWCWITWCWWRWITWCWRWII 287
Score = 30.0 bits (66), Expect = 0.62
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 9/29 (31%)
Frame = +3
Query: 26 TECWLGW------WRRWCW**W--W-WRW 45
T CW W W WCW W W WRW
Sbjct: 195 TWCWWRWITWCWCWITWCWWRWITWCWRW 281
Score = 29.3 bits (64), Expect = 1.1
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +3
Query: 29 WLGW-WRRWCW**WWWRWWR 47
W+ W W RW W W WWR
Sbjct: 297 WIIWCWWRWITWCWRWCWWR 356
Score = 28.9 bits (63), Expect = 1.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 24 GDTECWLGWWRRWCW**WWWRWW 46
G W+ W WCW WWW W
Sbjct: 93 GGVSHWITWC--WCW-YWWWITW 152
Score = 26.6 bits (57), Expect = 6.8
Identities = 8/18 (44%), Positives = 9/18 (49%)
Frame = +3
Query: 29 WLGWWRRWCW**WWWRWW 46
W+ W RWCW W W
Sbjct: 321 WITWCWRWCWWRPSWSCW 374
Score = 25.0 bits (53), Expect(2) = 6e-05
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 48 VVVTALAVVVQVVAATVVVLEVMVIMVVTLAAV 80
V + L + + +VAA VVVL ++IM V L V
Sbjct: 314 VALDYLVLALVLVAAVVVVLAPLLIMQVPLVVV 412
>TC208205 hydroxyproline-rich glycoprotein
Length = 603
Score = 33.1 bits (74), Expect = 0.073
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Frame = -1
Query: 32 WWRR-----WCW**WWWRWWRVV 49
WW R W W *W W WWR+V
Sbjct: 93 WWGR*LINIWRWW*WGWWWWRLV 25
Score = 31.2 bits (69), Expect(2) = 9e-05
Identities = 29/90 (32%), Positives = 32/90 (35%), Gaps = 14/90 (15%)
Frame = -2
Query: 82 EGGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGG----SVSDDSDEDNDSG 137
EGG GD GGG + GEGD GG + D D G
Sbjct: 254 EGGEGDGGGG------------------DLYT*GGGGEGDGGGGDLYT*GGGGDGDGGGG 129
Query: 138 D-------SEGDNGGDN---DNDGGDSDGG 157
D EGD GG + GGD DGG
Sbjct: 128 DL*TYGGGGEGDGGGGDL*IYGGGGDGDGG 39
Score = 30.8 bits (68), Expect(2) = 9e-05
Identities = 14/34 (41%), Positives = 16/34 (46%), Gaps = 13/34 (38%)
Frame = -1
Query: 30 LGWWRRWCW**WWWR-------------WWRVVV 50
+GW RR W WWWR WWR+VV
Sbjct: 357 VGWRRRM*W--WWWRLVIVWRRW*R*WRWWRLVV 262
>BG507592 similar to PIR|S52985|S52 cell wall protein - alfalfa, partial
(36%)
Length = 435
Score = 42.4 bits (98), Expect = 1e-04
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 25 DTECWLGWWRRWCW**WWWRWW 46
D CWL WW W W WWW WW
Sbjct: 425 DGACWLCWW--WVWHHWWWWWW 366
Score = 28.5 bits (62), Expect = 1.8
Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 3/21 (14%)
Frame = -2
Query: 29 WLGWW--RRWCW**WWW-RWW 46
W W RWCW WW WW
Sbjct: 302 WYNRWIHNRWCWHNWWINNWW 240
Score = 26.9 bits (58), Expect = 5.2
Identities = 11/33 (33%), Positives = 12/33 (36%), Gaps = 14/33 (42%)
Frame = -2
Query: 28 CWLGWWR-------------RWCW**WWW-RWW 46
CW WW RWC W+W WW
Sbjct: 272 CWHNWWINNWWFHNGWFWHIRWCNNWWFWHNWW 174
>TC234725 similar to UP|RFX1_HUMAN (P22670) MHC class II regulatory factor
RFX1 (RFX) (Enhancer factor C) (EF-C), partial (3%)
Length = 407
Score = 42.4 bits (98), Expect = 1e-04
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 29 WLGWWRRWCW**WWWRWW 46
W WW WCW WWW WW
Sbjct: 345 WWWWWWWWCWWWWWWWWW 292
Score = 38.1 bits (87), Expect = 0.002
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 29 WLGWWRRWCW**WWWRWW 46
W WW W W WWW WW
Sbjct: 336 WWWWWCWWWWWWWWWWWW 283
Score = 38.1 bits (87), Expect = 0.002
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 29 WLGWWRRWCW**WWWRWW 46
W WW W W WWW WW
Sbjct: 339 WWWWWWCWWWWWWWWWWW 286
>TC215070 similar to UP|Q40336 (Q40336) Proline-rich cell wall protein,
partial (82%)
Length = 1597
Score = 42.4 bits (98), Expect = 1e-04
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -1
Query: 25 DTECWLGWWRRWCW**WWWRWW 46
D CWL WW W W WWW WW
Sbjct: 937 DGACWLCWW--WVWHHWWWWWW 878
Score = 29.3 bits (64), Expect = 1.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 6/24 (25%)
Frame = -1
Query: 29 WLGWWRR---WC-W**WWWR--WW 46
W WW R WC W WW+R WW
Sbjct: 550 WHHWWFRDIWWCNWHHWWFRDIWW 479
Score = 28.5 bits (62), Expect = 1.8
Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 3/21 (14%)
Frame = -1
Query: 29 WLGWW--RRWCW**WWW-RWW 46
W W RWCW WW WW
Sbjct: 814 WYNRWIHNRWCWHNWWINNWW 752
Score = 26.9 bits (58), Expect = 5.2
Identities = 11/33 (33%), Positives = 12/33 (36%), Gaps = 14/33 (42%)
Frame = -1
Query: 28 CWLGWWR-------------RWCW**WWW-RWW 46
CW WW RWC W+W WW
Sbjct: 784 CWHNWWINNWWFHNGWFWHIRWCNNWWFWHNWW 686
Score = 26.6 bits (57), Expect = 6.8
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 17/37 (45%)
Frame = -1
Query: 29 WLGWWRR--------------WCW**--WW-WRWWRV 48
W+ WW R W W * WW W WW V
Sbjct: 283 WMNWWFRVVRRFWNIGRVYMGWFWR*LGWWTWFWWFV 173
>TC206524 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (6%)
Length = 464
Score = 39.3 bits (90), Expect(2) = 2e-04
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 29 WLGWWRRWCW**WWWRWWRV 48
W WWR W* WWW WW +
Sbjct: 35 WKEWWRSIWW*EWWWWWWSI 94
Score = 35.0 bits (79), Expect = 0.019
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 29 WLGWWRRWCW**WWWRWW 46
W WW+RW W WW+WW
Sbjct: 86 WSIWWKRW-WRSIWWKWW 136
Score = 33.9 bits (76), Expect = 0.043
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 4/22 (18%)
Frame = +2
Query: 29 WLGWWR----RWCW**WWWRWW 46
W WWR +W W WW+WW
Sbjct: 98 WKRWWRSIWWKWWWWSIWWKWW 163
Score = 32.3 bits (72), Expect = 0.12
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 32 WWRRWCW**WWWRWWRV 48
WW+ W W WW WW +
Sbjct: 122 WWKWWWWSIWWKWWWPI 172
Score = 29.6 bits (65), Expect = 0.81
Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Frame = +2
Query: 29 WLGWWRRWCW**WW--WRW 45
W WW+ W W WW WRW
Sbjct: 140 WSIWWK-WWWPIWWKRWRW 193
Score = 28.5 bits (62), Expect = 1.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 29 WLGWWRRWCW**WWWRWWR 47
W WW W WW WW+
Sbjct: 125 WKWWWWSIWWKWWWPIWWK 181
Score = 21.9 bits (45), Expect(2) = 2e-04
Identities = 15/37 (40%), Positives = 23/37 (61%), Gaps = 2/37 (5%)
Frame = +1
Query: 48 VVVTALAVVVQVVAATVVVLEVMVIMVVTLAA--VEE 82
VVV + +V +VVA +V + V+V +V + A VEE
Sbjct: 73 VVVVVVDLVEEVVAVDLVEVVVVVDLVEVVVADLVEE 183
>TC210023 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 protein
(Corresponding sequence ZK643.8), partial (12%)
Length = 819
Score = 36.6 bits (83), Expect = 0.007
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 11/32 (34%)
Frame = +2
Query: 28 CWLGW-----------WRRWCW**WWWRWWRV 48
CWL W W WCW WW WWR+
Sbjct: 191 CWLWWRLWKFD*EWWLWTLWCW--LWWLWWRL 280
Score = 32.7 bits (73), Expect(2) = 2e-04
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 7/28 (25%)
Frame = +2
Query: 28 CWLGWWRRWCW**-WW------WRWWRV 48
CWL WWR W + * WW W WWR+
Sbjct: 131 CWL-WWRLWKFD*EWWLRRLWCWLWWRL 211
Score = 31.6 bits (70), Expect(2) = 0.024
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 32 WWRRWCW**WWWRWWRVV 49
WW RW W W WR WR V
Sbjct: 371 WWLRWLW-RWLWRLWRRV 421
Score = 30.8 bits (68), Expect = 0.36
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 12/34 (35%)
Frame = +2
Query: 28 CWLGW--WRRW-------CW**W---WWRWWRVV 49
CWL W WR W W W WWR WR V
Sbjct: 251 CWLWWLWWRLWKFD*EWWLWRLWCGLWWRLWRRV 352
Score = 28.9 bits (63), Expect(2) = 0.015
Identities = 9/17 (52%), Positives = 10/17 (57%)
Frame = +2
Query: 31 GWWRRWCW**WWWRWWR 47
G W WCW WWR W+
Sbjct: 113 GKWWLWCW--LWWRLWK 157
Score = 28.1 bits (61), Expect(2) = 2e-04
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 48 VVVTALAVVVQVVAATVVVLEVMVIMVVTLAAVEEG 83
VVV + VVV+ V + V+ V V++ V + AVEEG
Sbjct: 244 VVVLVVVVVVEAVEI*LRVVVVAVVVRVVVEAVEEG 351
Score = 26.9 bits (58), Expect = 5.2
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 12/32 (37%)
Frame = +2
Query: 27 ECWLGWWRRWCW-----------**WWWR-WW 46
E WL W RW W *W WR WW
Sbjct: 368 EWWLRWLWRWLWRLWRRVWK*VGE*WLWRLWW 463
Score = 26.6 bits (57), Expect = 6.8
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 4/20 (20%)
Frame = +2
Query: 33 WRRW-C---W**WWWRWWRV 48
WR W C W W W WWR+
Sbjct: 92 WRLWKCSGKWWLWCWLWWRL 151
Score = 25.4 bits (54), Expect(2) = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 48 VVVTALAVVVQVVAATVVVLEVMVIM 73
VVV A+ + ++VVA VVVL V+V++
Sbjct: 196 VVVEAVEI*LRVVAVDVVVLVVVVVV 273
Score = 21.9 bits (45), Expect(2) = 0.024
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 1 GGGQGSCDNNDEGDGGDGCRDGSG 24
GG G C N + G GC G G
Sbjct: 261 GGCGGGCGNLIKSGGCGGCGAGCG 332
>TC231868 similar to UP|Q93424 (Q93424) C. elegans GRL-23 protein
(Corresponding sequence E02A10.2), partial (23%)
Length = 790
Score = 31.2 bits (69), Expect(2) = 3e-04
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 12/32 (37%)
Frame = +3
Query: 29 WLGWWRRWCW---------**WW---WRWWRV 48
WL WR WCW * WW W WWR+
Sbjct: 174 WL--WRLWCWLWRRLWKYD*EWWLWFWLWWRL 263
Score = 30.4 bits (67), Expect(2) = 0.086
Identities = 14/34 (41%), Positives = 15/34 (43%), Gaps = 10/34 (29%)
Frame = +3
Query: 25 DTECWLG---WWRRWC-------W**WWWRWWRV 48
D E WL WWR W W WWW W R+
Sbjct: 222 D*EWWLWFWLWWRLWKFD*GWWLWRLWWWLWRRL 323
Score = 30.0 bits (66), Expect(2) = 0.052
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 28 CWLGWWRRWCW**WWWRWWRVV 49
CWL WRR W W WR WR V
Sbjct: 354 CWL--WRRLWW--WLWRLWRRV 407
Score = 29.3 bits (64), Expect(2) = 3e-04
Identities = 21/43 (48%), Positives = 24/43 (54%), Gaps = 6/43 (13%)
Frame = +2
Query: 47 RVVVTALAVVVQVVA------ATVVVLEVMVIMVVTLAAVEEG 83
RVVV A+ VVV A VVVL V +VV + AVEEG
Sbjct: 278 RVVVVAVVVVVVAEAVEI*LRVVVVVLVVAEAVVVVVEAVEEG 406
Score = 26.9 bits (58), Expect = 5.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 46 WRVVVTALAVVVQVVAATVVVLEVMVIMVVTLAAVE 81
W+VV AVV+ V A + L V+V+++V + AVE
Sbjct: 164 WKVVAVE-AVVLVVAEAVEI*LRVVVVVLVVVEAVE 268
Score = 26.9 bits (58), Expect = 5.2
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +2
Query: 47 RVVVTALAVVVQVVAATVVVLEVMVIMVVTLAAVEEGGRGDSGGGGPLWYILVMAMTTTS 106
RVVV L VVV+ V + V+ V V++VV AVE I + +
Sbjct: 227 RVVVVVL-VVVEAVEI*LRVVVVAVVVVVVAEAVE---------------I*LRVVVVVL 358
Query: 107 EVVEAVVVVLE 117
V EAVVVV+E
Sbjct: 359 VVAEAVVVVVE 391
Score = 22.3 bits (46), Expect(2) = 0.052
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 2 GGQGSCDNNDEGDGGDGCRDGSG 24
G G C N +G G GC G G
Sbjct: 247 GCGGGCGNLIKGGGCGGCGGGCG 315
Score = 21.2 bits (43), Expect(2) = 0.086
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 5 GSCDNNDEGDGGDGCRDGSG 24
G C N E G GC G G
Sbjct: 145 GGCGNAMESGGCGGCGAGCG 204
>TC213539 similar to UP|Q9LW52 (Q9LW52) Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MLM24, partial (8%)
Length = 356
Score = 38.9 bits (89), Expect(2) = 3e-04
Identities = 11/16 (68%), Positives = 12/16 (74%)
Frame = +1
Query: 32 WWRRWCW**WWWRWWR 47
WWR W W *WW+ WWR
Sbjct: 34 WWRWWLWS*WWFWWWR 81
Score = 37.4 bits (85), Expect = 0.004
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 29 WLGWWRRWCW**WWWRWW 46
W WW RWCW WW WW
Sbjct: 61 WWFWWWRWCW-IWWRSWW 111
Score = 26.2 bits (56), Expect = 8.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 28 CWLGWWRRWCW 38
CW+ WWR W W
Sbjct: 85 CWI-WWRSWWW 114
Score = 21.6 bits (44), Expect(2) = 3e-04
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 48 VVVTALAVVVQVVAATVVVLEVMVIM 73
VVV +AVV+ +VA VV + V M
Sbjct: 60 VVVLVVAVVLDLVAELVVATRLNVDM 137
>TC228623 similar to UP|Q9SA21 (Q9SA21) F3O9.2 protein, partial (85%)
Length = 1082
Score = 41.2 bits (95), Expect = 3e-04
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +2
Query: 81 EEGGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSG--- 137
EEGGRG GGG + +E A V GEG G V ++ ++ D+G
Sbjct: 260 EEGGRGRKEGGG-----------SRAESGGATVGGAGGEG--AGEVDEEGGQEGDTGVDP 400
Query: 138 DSEGDNGGDNDNDGGDSDGG 157
+EGD GG + +GG + GG
Sbjct: 401 GAEGDGGGAEEAEGGGAGGG 460
>TC215069 similar to UP|O24300 (O24300) PtxA protein precursor, partial (83%)
Length = 1405
Score = 41.2 bits (95), Expect = 3e-04
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 28 CWLGWWRRWCW**WWWRWW 46
CWL WW W W WWW WW
Sbjct: 754 CWLCWW--WIWHHWWWWWW 704
Score = 26.9 bits (58), Expect = 5.2
Identities = 7/17 (41%), Positives = 7/17 (41%)
Frame = -1
Query: 29 WLGWWRRWCW**WWWRW 45
W W W W WW W
Sbjct: 550 WCNWHNWWFWDIWWSNW 500
Score = 26.6 bits (57), Expect = 6.8
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 12/30 (40%)
Frame = -1
Query: 29 WLGWWRR---------WCW**WWWR---WW 46
W+ WW R W + W+WR WW
Sbjct: 280 WMNWWFRVVRRFWDIGWVYMGWFWR*LGWW 191
>TC204070 similar to UP|Q39835 (Q39835) Extensin, partial (34%)
Length = 596
Score = 40.8 bits (94), Expect = 3e-04
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -2
Query: 31 GWWRRWC--W**WWWRWWRVVV 50
GWWRRW W WWW WW +V+
Sbjct: 400 GWWRRWVLVWWWWWWWWWGLVL 335
Score = 35.8 bits (81), Expect = 0.011
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -2
Query: 32 WWRR--WCW**WWWRWWRVVVTAL 53
WWRR + W WW WWRVVV L
Sbjct: 199 WWRRRVFVWLLGWWWWWRVVVVRL 128
Score = 30.8 bits (68), Expect = 0.36
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
Frame = -2
Query: 32 WWRRWCW**WWW------RWWR 47
WWRR + WWW RWWR
Sbjct: 256 WWRR*IFVRWWWGLVLINRWWR 191
>TC231411 similar to GB|AAP21370.1|30102904|BT006562 At3g27200 {Arabidopsis
thaliana;} , partial (57%)
Length = 855
Score = 40.8 bits (94), Expect = 3e-04
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -1
Query: 107 EVVEAVVVVLEGEGDDGGSVSDDSDEDNDS-GDSEGDNGGDNDNDG 151
E +A+V V GE DDGG +D D + DS GDS+GD GDN +G
Sbjct: 564 EAEDALVFV--GEEDDGGDDNDVDDNNGDSDGDSDGDVAGDNAGEG 433
>TC214303 similar to UP|Q9T0K5 (Q9T0K5) Extensin-like protein, partial (18%)
Length = 1014
Score = 35.8 bits (81), Expect(2) = 0.003
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 13/33 (39%)
Frame = -3
Query: 29 WLGWWR--------RWCW**WWWR-----WWRV 48
W WWR W W* WWWR WWR+
Sbjct: 148 WRRWWR**IGINWWWWWW*MWWWRRRWRWWWRI 50
Score = 29.6 bits (65), Expect(2) = 0.007
Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Frame = -1
Query: 83 GGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGG-----SVSDDSDEDNDSG 137
GG GD GGGG L+ I G+GD GG E + G
Sbjct: 372 GGGGD-GGGGELY*IGGGG----------------GDGDGGGW*GAECGDGGGGECSSQG 244
Query: 138 DSEGDNGGDNDNDGGDSDGG 157
G GGD+ GGD GG
Sbjct: 243 GGGGGGGGDSIQGGGDGGGG 184
Score = 29.6 bits (65), Expect(3) = 6e-04
Identities = 14/30 (46%), Positives = 15/30 (49%), Gaps = 8/30 (26%)
Frame = -3
Query: 28 CWLGWWRRWCW**-------WW-WRWWRVV 49
CW WR W W * WW W WWR+V
Sbjct: 376 CWR--WR*WWWW*IILNWGRWW*W*WWRMV 293
Score = 28.9 bits (63), Expect(2) = 0.031
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 15/30 (50%)
Frame = -3
Query: 32 WWR-------RWCW**WWW--------RWW 46
WWR W W *WWW RWW
Sbjct: 406 WWR*IVMINRCWRWR*WWWW*IILNWGRWW 317
Score = 28.9 bits (63), Expect(2) = 0.14
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 19/38 (50%)
Frame = -3
Query: 29 WLGWWRR---------WCW**W---WW-------RWWR 47
W WWRR W W W WW RWWR
Sbjct: 244 WWRWWRRR*LYTRWWRWGWRWW*INWWGRRVNWRRWWR 131
Score = 28.5 bits (62), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 11/27 (40%)
Frame = -3
Query: 32 WWRR--------WCW**W---WWRWWR 47
WWR W W* WWRWWR
Sbjct: 307 WWRMVRCRVW*WWWW*MLFTRWWRWWR 227
Score = 27.3 bits (59), Expect = 4.0
Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 12/31 (38%)
Frame = -3
Query: 29 WLGWWRRWCW**WWWR------------WWR 47
W WW R W WWWR WWR
Sbjct: 97 W*MWWWRRRW-RWWWRIRWRRCRRRIHWWWR 8
Score = 26.6 bits (57), Expect(2) = 0.11
Identities = 26/76 (34%), Positives = 35/76 (45%), Gaps = 8/76 (10%)
Frame = -2
Query: 49 VVTALAVVVQVVAATVV--------VLEVMVIMVVTLAAVEEGGRGDSGGGGPLWYILVM 100
V AL + VQVV TVV VLEV +MVV + +E G ++VM
Sbjct: 452 VAKALHIQVQVVEMTVVAVNCNDKQVLEV-AVMVVVVNYIELG------------EVVVM 312
Query: 101 AMTTTSEVVEAVVVVL 116
M +V V+VV+
Sbjct: 311 VMVADGKVQSVVMVVV 264
Score = 26.2 bits (56), Expect = 8.9
Identities = 11/24 (45%), Positives = 12/24 (49%)
Frame = -1
Query: 1 GGGQGSCDNNDEGDGGDGCRDGSG 24
GGG G C +G GG G G G
Sbjct: 108 GGGGGECGGGGDGGGGGGEYVGGG 37
Score = 25.8 bits (55), Expect(2) = 0.007
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 15/35 (42%)
Frame = -3
Query: 31 GWWRRWC-------------W**WWW--RWWRVVV 50
GWWRR C + WW RWWR +V
Sbjct: 493 GWWRRRCIRDSDDGWQRPFIYRCRWWR*RWWR*IV 389
Score = 24.6 bits (52), Expect(2) = 0.11
Identities = 15/41 (36%), Positives = 19/41 (45%), Gaps = 3/41 (7%)
Frame = -1
Query: 120 GDDGGSVSDDSDEDNDSGDSEGDN---GGDNDNDGGDSDGG 157
GD GG + S + G GD+ GGD GG+ GG
Sbjct: 279 GDGGGG--ECSSQGGGGGGGGGDSIQGGGDGGGGGGE*TGG 163
Score = 24.3 bits (51), Expect(2) = 0.031
Identities = 22/75 (29%), Positives = 28/75 (37%)
Frame = -1
Query: 83 GGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSGDSEGD 142
GG GD GGG W +E + +G GG DS + G G
Sbjct: 327 GGGGDGDGGG--W*--------GAECGDGGGGECSSQGGGGGGGGGDSIQGGGDG---GG 187
Query: 143 NGGDNDNDGGDSDGG 157
GG+ GG+ GG
Sbjct: 186 GGGE*TGGGGE*TGG 142
Score = 24.3 bits (51), Expect(3) = 6e-04
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 118 GEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 157
GE GG D G E GGD GG+ GG
Sbjct: 159 GE*TGGGGGGDK*G*TGGGGGGECGGGGDGGGGGGEYVGG 40
Score = 23.9 bits (50), Expect(3) = 6e-04
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 48 VVVTALAVVVQVVAATVV---VLEVMVIMVVTLAAVEE 82
VVV AL VV+VVA V V+E+ V +VV EE
Sbjct: 269 VVVNALHKVVEVVAEEVTLYKVVEMGVAVVVNKLVGEE 156
Score = 21.9 bits (45), Expect(2) = 0.14
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 48 VVVTALAVVVQVVAATVVVLEVMVIMVVTLAAVEE 82
VVV + VVV+ A VV + + VEE
Sbjct: 110 VVVVVVNVVVEETVAVVVANTLEAVQAANTLVVEE 6
Score = 20.8 bits (42), Expect(2) = 0.003
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 1 GGGQGSCDNNDEGDGGDG 18
GGG G GDGG G
Sbjct: 237 GGGGGGDSIQGGGDGGGG 184
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 40.0 bits (92), Expect = 6e-04
Identities = 19/40 (47%), Positives = 24/40 (59%), Gaps = 2/40 (5%)
Frame = +3
Query: 120 GDDGGSV--SDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 157
GDDGG SDD E N G S+ D+G D+++D D D G
Sbjct: 360 GDDGGEEADSDDDPEANGGGGSDDDDGDDDEDDDNDEDDG 479
Score = 37.0 bits (84), Expect = 0.005
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Frame = +3
Query: 117 EGEGDD-------GGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSD 155
E + DD GGS DD D+D D D++ D+G ++D D GD D
Sbjct: 378 EADSDDDPEANGGGGSDDDDGDDDEDD-DNDEDDGDEDDEDEGDDD 512
Score = 33.1 bits (74), Expect = 0.073
Identities = 14/39 (35%), Positives = 21/39 (52%)
Frame = +3
Query: 119 EGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 157
E + S ++D D+D++ D E DN + D D DGG
Sbjct: 258 EENKDASDTEDDDDDDNVNDGEDDNDDEEDEDFSGDDGG 374
Score = 30.8 bits (68), Expect = 0.36
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +3
Query: 119 EGDDGGSVSDDSDEDNDSGDSE--GDNGG---DNDNDGGDSDGG 157
+ DD +V+D D+++D D + GD+GG D+D+D + GG
Sbjct: 288 DDDDDDNVNDGEDDNDDEEDEDFSGDDGGEEADSDDDPEANGGG 419
Score = 30.4 bits (67), Expect = 0.47
Identities = 15/46 (32%), Positives = 24/46 (51%), Gaps = 11/46 (23%)
Frame = +3
Query: 121 DDGGSVSDDSDEDNDSGDS-----------EGDNGGDNDNDGGDSD 155
+DG +DD ++++ SGD E + GG +D+D GD D
Sbjct: 312 NDGEDDNDDEEDEDFSGDDGGEEADSDDDPEANGGGGSDDDDGDDD 449
Score = 30.0 bits (66), Expect = 0.62
Identities = 14/36 (38%), Positives = 18/36 (49%), Gaps = 4/36 (11%)
Frame = +3
Query: 118 GEGDDGGSVSDDSDEDNDSGDS----EGDNGGDNDN 149
G DD G +D D D D GD EGD+ D ++
Sbjct: 420 GSDDDDGDDDEDDDNDEDDGDEDDEDEGDDDEDEES 527
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 33.9 bits (76), Expect(2) = 7e-04
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = -1
Query: 29 WLGWWRRWCW**WWWRW 45
W GWW RW + WWRW
Sbjct: 444 WWGWWWRWWFYTRWWRW 394
Score = 32.3 bits (72), Expect = 0.12
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 4/22 (18%)
Frame = -1
Query: 29 WLGWWR----RWCW**WWWRWW 46
W WW W W WWWRWW
Sbjct: 480 W*WWWW*MLFTWWWG-WWWRWW 418
Score = 31.6 bits (70), Expect(2) = 0.009
Identities = 11/21 (52%), Positives = 12/21 (56%), Gaps = 4/21 (19%)
Frame = -1
Query: 29 WLGWWRRWCW**WW----WRW 45
W +WR W W *WW WRW
Sbjct: 174 WGEYWRWWRWR*WWRR*RWRW 112
Score = 30.0 bits (66), Expect = 0.62
Identities = 14/30 (46%), Positives = 15/30 (49%), Gaps = 8/30 (26%)
Frame = -1
Query: 28 CWLGWWRRWCW**-------WW-WRWWRVV 49
CW WR W W * WW WRWW +V
Sbjct: 576 CWR--WR*WWWW*IILNRGRWWRWRWWWMV 493
Score = 30.0 bits (66), Expect = 0.62
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 16/35 (45%)
Frame = -1
Query: 29 WLGWWRR--------WCW**WWW--------RWWR 47
W WRR W W *WWW RWWR
Sbjct: 618 WK*RWRR*IVMINRCWRWR*WWWW*IILNRGRWWR 514
Score = 28.5 bits (62), Expect(3) = 0.006
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 12/42 (28%)
Frame = -1
Query: 21 DGSGDTECWLGWW------------RRWCW**WWWRWWRVVV 50
D G W WW R W W WWRW R V+
Sbjct: 342 DWRGRRVNWRRWWW**IGINRWRR*RWWWWGRMWWRWRRRVL 217
Score = 25.0 bits (53), Expect(2) = 7e-04
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = -2
Query: 2 GGQGSCDNNDEGDGGDG 18
GG G C ++ GDGG G
Sbjct: 473 GGGGECSSHGGGDGGGG 423
Score = 24.6 bits (52), Expect(3) = 0.006
Identities = 21/76 (27%), Positives = 25/76 (32%)
Frame = -2
Query: 82 EGGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSGDSEG 141
+GG G+ GGG Y V EG G +GG G
Sbjct: 140 DGGGGEGGGGDLTQY------------------VGEGGGGEGG------------GGGGE 51
Query: 142 DNGGDNDNDGGDSDGG 157
GG + GGD GG
Sbjct: 50 *TGGGGEGGGGDGGGG 3
Score = 24.6 bits (52), Expect(2) = 3.5
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -2
Query: 118 GEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 157
G GD GG G +G GGD GG+ GG
Sbjct: 446 GGGDGGGGGGSIQGGGGGGGSIQG--GGDGGGGGGE*TGG 333
Score = 24.3 bits (51), Expect(2) = 1.7
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 118 GEGDDGGSVSDDSDEDNDSGDSEGDNGGDN--DNDGGDSDGG 157
G GD GG D G+ G GG + GG +GG
Sbjct: 149 GGGDGGGGEGGGGDLTQYVGEGGGGEGGGGGGE*TGGGGEGG 24
Score = 23.5 bits (49), Expect(2) = 0.009
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 80 VEEGGRGDSGGGG 92
V EGG G+ GGGG
Sbjct: 95 VGEGGGGEGGGGG 57
Score = 22.7 bits (47), Expect(2) = 1.7
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -1
Query: 161 KQ*WWRWR 168
++*WWRWR
Sbjct: 24 RR*WWRWR 1
Score = 21.2 bits (43), Expect(2) = 3.5
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = -1
Query: 164 WWRWR 168
WWRWR
Sbjct: 243 WWRWR 229
Score = 20.8 bits (42), Expect(3) = 0.006
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 1 GGGQGSCDNNDEGDGGDG 18
GGG G GDGG G
Sbjct: 407 GGGGGGGSIQGGGDGGGG 354
>TC209365 weakly similar to UP|Q9M6T8 (Q9M6T8) Glycine-rich protein
(Fragment), partial (53%)
Length = 614
Score = 30.0 bits (66), Expect(2) = 7e-04
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 28 CWLGWWRRWCW**WWWRWW 46
C + WWR W WRWW
Sbjct: 94 CQISWWRLWWGLPRQWRWW 150
Score = 28.9 bits (63), Expect(2) = 7e-04
Identities = 22/69 (31%), Positives = 32/69 (45%), Gaps = 6/69 (8%)
Frame = +3
Query: 50 VTALAVVVQVVAATVVVLEVMVIMVVTLA------AVEEGGRGDSGGGGPLWYILVMAMT 103
+ +A++ VVA VVV+ + V +VVTL AVEEG I+ MA+
Sbjct: 138 MAVVAILAVVVATLVVVVAIQVAVVVTLVVVAAIQAVEEG-------------IVAMAVA 278
Query: 104 TTSEVVEAV 112
+E V
Sbjct: 279 VAGHTMEVV 305
Score = 27.3 bits (59), Expect = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 4/22 (18%)
Frame = +1
Query: 29 WLGWWRRWCW**WWW----RWW 46
WL W W WWW RWW
Sbjct: 148 WLSWPWWWLPWSWWWLSRSRWW 213
Score = 26.2 bits (56), Expect = 8.9
Identities = 11/27 (40%), Positives = 12/27 (43%), Gaps = 9/27 (33%)
Frame = +1
Query: 29 WLGWW---RRWCW---**WW---WRWW 46
W WW R+W W WW W WW
Sbjct: 109 WRLWWGLPRQWRWWLSWPWWWLPWSWW 189
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.328 0.147 0.543
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,987,425
Number of Sequences: 63676
Number of extensions: 161989
Number of successful extensions: 7927
Number of sequences better than 10.0: 653
Number of HSP's better than 10.0 without gapping: 4365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6477
length of query: 180
length of database: 12,639,632
effective HSP length: 91
effective length of query: 89
effective length of database: 6,845,116
effective search space: 609215324
effective search space used: 609215324
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0276.7