BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0239.10
(553 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226166 similar to UP|O23724 (O23724) GAI protein, partial (70%) 167 9e-42
TC204219 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial... 152 4e-37
BI426428 145 6e-35
BU547981 131 7e-31
TC226165 GAI1 [Glycine max] 118 8e-27
TC227564 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-... 111 7e-25
TC204217 similar to UP|Q8S4W7 (Q8S4W7) GAI-like protein 1, parti... 109 4e-24
CO981442 108 8e-24
TC228546 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partia... 107 2e-23
TC229255 similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like protein, p... 105 7e-23
TC220761 similar to UP|Q7G7J6 (Q7G7J6) Gibberellin-insensitive p... 103 2e-22
TC208938 weakly similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like pro... 103 3e-22
TC219179 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-... 102 3e-22
TC228139 similar to UP|Q8GVE1 (Q8GVE1) Chitin-inducible gibberel... 101 1e-21
TC231668 homologue to UP|Q9AVK4 (Q9AVK4) SCARECROW, partial (28%) 100 2e-21
TC211103 weakly similar to UP|Q6S5L6 (Q6S5L6) GAI protein, parti... 100 2e-21
TC209743 similar to PIR|E86347|E86347 scarecrow-like 1 protein F... 96 5e-20
TC210169 similar to UP|Q8L553 (Q8L553) SCARECROW transcriptional... 93 3e-19
TC230486 similar to UP|Q8L553 (Q8L553) SCARECROW transcriptional... 92 6e-19
TC220187 similar to PIR|E86347|E86347 scarecrow-like 1 protein F... 89 7e-18
>TC226166 similar to UP|O23724 (O23724) GAI protein, partial (70%)
Length = 1613
Score = 167 bits (424), Expect = 9e-42
Identities = 107/376 (28%), Positives = 180/376 (47%), Gaps = 3/376 (0%)
Frame = +1
Query: 179 IELAQLLLAAAERVSCQQFERASFLLQNFQGNSPHHGSAVQRVIFHFAQALQERINKENG 238
I L L+A AE V A L++ + A+++V +FA+AL RI +
Sbjct: 106 IRLVHSLMACAEAVENNNLAVAEALVKQIGFLAVSQVGAMRKVAIYFAEALARRIYRVFP 285
Query: 239 TTLKGSDERVKERHLIELLEVDTNITILCHQKMPFYQVMQFAGVQAILENVASGTKIHLI 298
SD ++ I ++ P+ + F Q ILE ++H+I
Sbjct: 286 LQHSLSD----------------SLQIHFYETCPYLKFAHFTANQVILEAFQGKNRVHVI 417
Query: 299 NINIGCGVMCTGLMQALSERQENPVEILKITAVG---VANKTKIEETGKRLMSFAESLNL 355
+ I G+ LMQAL+ R P + ++T +G N ++E G +L AE +N+
Sbjct: 418 DFGINQGMQWPALMQALAVRTGGP-PVFRLTGIGPPAADNSDHLQEVGWKLAQLAEEINV 594
Query: 356 PFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDSDSLENLMKVLRKIKPNI 415
F Y + ++ D+ +DE+VAV S + L++ ++E ++ V+R+I+P I
Sbjct: 595 QFEYRGFVANSLADLDASMLDLREDESVAVNSVFEFHKLLARPGAVEKVLSVVRQIRPEI 774
Query: 416 MINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKEEHECRMRIEEMLSEKIRNIVA 475
+ + EANHN SFV+RF E+L YYS FD L+ ++ M E L ++I N+VA
Sbjct: 775 LTVVEQEANHNGLSFVDRFTESLHYYSTLFDSLEGSPVNPNDKAMS-EVYLGKQICNVVA 951
Query: 476 MEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQANLVAKKFACGNSCTIDKNGKCL 535
E +R R ++ WR F L +A QA+++ F G+ +++N CL
Sbjct: 952 CEGMDRVERHETLNQWRNRFGSTGFSPVHLGSNAYKQASMLLSLFGGGDGYRVEENNGCL 1131
Query: 536 LIGWKGTPIHSISAWK 551
++GW P+ + S W+
Sbjct: 1132MLGWHTRPLIATSVWQ 1179
>TC204219 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial (50%)
Length = 1208
Score = 152 bits (384), Expect = 4e-37
Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 8/294 (2%)
Frame = +1
Query: 268 HQKMPFYQVMQFAGVQAILENVASGTKIHLININIGCGVMCTGLMQALSERQENPVEILK 327
++ P+ + F QAILE A+ K+H+I+ + G+ LMQAL+ R P +
Sbjct: 19 YESCPYLKFAHFTANQAILEAFATAGKVHVIDFGLKQGMQWPALMQALALRPGGP-PTFR 195
Query: 328 ITAVGVA---NKTKIEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVA 384
+T +G N +++ G +L A+++ + F + + ++ + ++ EAVA
Sbjct: 196 LTGIGPPQPDNTDALQQVGWKLAQLAQNIGVQFEFRGFVCNSLADLDPKMLEIRPGEAVA 375
Query: 385 VYSPYFLRSLVSDSDSLENLMKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAY 444
V S + L +++ S++ ++ ++KIKP I+ + EANHN P F++RF EAL YYS+
Sbjct: 376 VNSVFELHRMLARPGSVDKVLDTVKKIKPKIVTIVEQEANHNGPGFLDRFTEALHYYSSL 555
Query: 445 FDCLD-----TCMKEEHECRMRIEEMLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYR 499
FD L+ T + ++ + E L +I N+VA E +R R + WR
Sbjct: 556 FDSLEGSSSSTGLGSPNQDLLMSELYLGRQICNVVANEGADRVERHETLSQWRGRLDSAG 735
Query: 500 MVETRLSESAVYQANLVAKKFACGNSCTIDKNGKCLLIGWKGTPIHSISAWKFP 553
L +A QA+++ FA G+ +++N CL++GW P+ + SAWK P
Sbjct: 736 FDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLP 897
>BI426428
Length = 421
Score = 145 bits (365), Expect = 6e-35
Identities = 81/142 (57%), Positives = 107/142 (75%), Gaps = 1/142 (0%)
Frame = +3
Query: 188 AAERVSCQQFERASFLLQNFQGNSPHHGSAVQRVIFHFAQALQERINKENGT-TLKGSDE 246
AAERV CQQFERA+ LL + + +S + VQRVIFHFA+AL+ERI KE G T+KGS +
Sbjct: 3 AAERVGCQQFERANGLLLHCEWSSNASANPVQRVIFHFARALRERIYKETGRMTVKGSGK 182
Query: 247 RVKERHLIELLEVDTNITILCHQKMPFYQVMQFAGVQAILENVASGTKIHLININIGCGV 306
+ER L++ ++DTNI + CH K+PF QVMQF G+QAI+E+VA TKIHLI++ I GV
Sbjct: 183 N-EERELLQ--KMDTNIALKCHLKVPFNQVMQFTGIQAIVEHVACETKIHLIDLEIRSGV 353
Query: 307 MCTGLMQALSERQENPVEILKI 328
T LMQAL+ER++ V++LKI
Sbjct: 354 QYTALMQALAERRDRIVQLLKI 419
>BU547981
Length = 614
Score = 131 bits (330), Expect = 7e-31
Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
Frame = -2
Query: 451 CMKEEHECRMRIEEM-LSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESA 509
CMK + + RM IE M S IRNIVA E ER RSVKIDVWR FF+R+ M E LS +
Sbjct: 610 CMKGDEKNRMIIESMYFSPGIRNIVAAEGAERRSRSVKIDVWRAFFSRFGMEEKELSTLS 431
Query: 510 VYQANLVAKKFACGNSCTIDKNGKCLLIGWKGTPIHSISAWKF 552
+YQA LVAK+F CGN CT ++NG CLLIGWKGTPI+S+S WKF
Sbjct: 430 LYQAELVAKRFPCGNFCTFERNGHCLLIGWKGTPINSVSVWKF 302
>TC226165 GAI1 [Glycine max]
Length = 1313
Score = 118 bits (295), Expect = 8e-27
Identities = 76/267 (28%), Positives = 132/267 (48%), Gaps = 3/267 (1%)
Frame = +3
Query: 179 IELAQLLLAAAERVSCQQFERASFLLQNFQGNSPHHGSAVQRVIFHFAQALQERINKENG 238
I L L+A AE V A L++ + A+++V +FA+AL RI +
Sbjct: 561 IRLVHSLMACAEAVENNNLAVAEALVKQIGFLALSQVGAMRKVATYFAEALARRIYRV-- 734
Query: 239 TTLKGSDERVKERHLIELLEVDTNITILCHQKMPFYQVMQFAGVQAILENVASGTKIHLI 298
++H + ++ I ++ P+ + F QAILE ++H+I
Sbjct: 735 ---------FPQQH-----SLSDSLQIHFYETCPYLKFAHFTANQAILEAFQGKNRVHVI 872
Query: 299 NINIGCGVMCTGLMQALSERQENPVEILKITAVG---VANKTKIEETGKRLMSFAESLNL 355
+ I G+ LMQAL+ R + P + ++T +G N ++E G +L AE +++
Sbjct: 873 DFGINQGMQWPALMQALALRNDGP-PVFRLTGIGPPAADNSDHLQEVGWKLAQLAERIHV 1049
Query: 356 PFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDSDSLENLMKVLRKIKPNI 415
F Y + ++ D+ +DE+VAV S + L++ ++E ++ V+R+I+P I
Sbjct: 1050QFEYRGFVANSLADLDASMLDLREDESVAVNSVFEFHKLLARPGAVEKVLSVVRQIRPEI 1229
Query: 416 MINLGVEANHNSPSFVNRFVEALFYYS 442
+ + EANHN SFV+RF E+L YYS
Sbjct: 1230LTVVEQEANHNGLSFVDRFTESLHYYS 1310
>TC227564 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-like
(Phytochrome A signal transduction 1 protein), partial
(53%)
Length = 1107
Score = 111 bits (278), Expect = 7e-25
Identities = 72/268 (26%), Positives = 140/268 (51%), Gaps = 10/268 (3%)
Frame = +3
Query: 294 KIHLININIGCGVMCTGLMQALSERQENPVEILKITAV-----GVANKTKIEETGKRLMS 348
++H+++ IG G L+QAL+ R P +I +I+ V A + ++ GKRL +
Sbjct: 3 EVHIVDFQIGQGTQWVSLIQALARRPVGPPKI-RISGVDDSYSAYARRGGLDIVGKRLSA 179
Query: 349 FAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDSDSLEN----L 404
A+S ++PF +N + V + E+++E ++ EAVAV L + +S + N L
Sbjct: 180 LAQSCHVPFEFNAVRVP-VTEVQLEDLELRPYEAVAVNFAISLHHVPDESVNSHNHRDRL 356
Query: 405 MKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKEEHECRMRIEE 464
+++ +++ P ++ + E + N+ F+ RFVE + YY A F+ +DT + EH+ R+ +E+
Sbjct: 357 LRLAKQLSPKVVTLVEQEFSTNNAPFLQRFVETMNYYLAVFESIDTVLPREHKERINVEQ 536
Query: 465 -MLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQANLVAKKFACG 523
L+ ++ N++A E ER R ++ WR F + L S+V +++ +
Sbjct: 537 HCLAREVVNLIACEGEERVERHELLNKWRMRFTKAGFTPYPL--SSVINSSIKDLLQSYH 710
Query: 524 NSCTIDKNGKCLLIGWKGTPIHSISAWK 551
T+++ L +GW + + AW+
Sbjct: 711 GHYTLEERDGALFLGWMNQVLVASCAWR 794
>TC204217 similar to UP|Q8S4W7 (Q8S4W7) GAI-like protein 1, partial (29%)
Length = 966
Score = 109 bits (272), Expect = 4e-24
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Frame = +2
Query: 376 DVEDDEAVAVYSPYFLRSLVSDSDSLENLMKVLRKIKPNIMINLGVEANHNSPSFVNRFV 435
++ EAVAV S + L +++ S S++ ++ ++KI P I+ + EANHN P F++RF
Sbjct: 53 EIRPGEAVAVNSVFELHRMLARSGSVDKVLDTVKKINPQIVTIVEQEANHNGPGFLDRFT 232
Query: 436 EALFYYSAYFDCLD------TCMKEEHECRMRIEEMLSEKIRNIVAMEDRERTVRSVKID 489
EAL YYS+ FD L+ T + + + E L +I N+VA E +R R +
Sbjct: 233 EALHYYSSLFDSLEGSSSSSTGLGSPSQDLLMSELYLGRQICNVVAYEGPDRVERHETLT 412
Query: 490 VWRRFFARYRMVETRLSESAVYQANLVAKKFACGNSCTIDKNGKCLLIGWKGTPIHSISA 549
WR L +A QA+++ FA G+ +++N CL++GW P+ + SA
Sbjct: 413 QWRGRLDSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSA 592
Query: 550 WKFP 553
WK P
Sbjct: 593 WKLP 604
>CO981442
Length = 791
Score = 108 bits (269), Expect = 8e-24
Identities = 77/257 (29%), Positives = 129/257 (49%), Gaps = 10/257 (3%)
Frame = -2
Query: 295 IHLININIGCGVMCTGLMQALSERQENPVEILKITAV-----GVANKTKIEETGKRLMSF 349
IH+I+ I G L+ LS R P + L+IT + G+ + ++ ETG+RL +F
Sbjct: 769 IHIIDFGIRYGFKWPALISRLSRRSGGPPK-LRITGIDVPQPGLRPQERVLETGRRLANF 593
Query: 350 AESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDSDSLEN----LM 405
+ N+PF +N I I+VE +E +E VAV + L+ ++ L N ++
Sbjct: 592 CKRFNVPFEFNAI-AQRWDTIRVEDLKIEPNEFVAVNCLFQFEHLLDETVVLNNSRDAVL 416
Query: 406 KVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKEEHECRMRIE-E 464
++++ P+I ++ V +++ P FV+RF EALF+Y+A FD LDT + + R+ E E
Sbjct: 415 RLIKNANPDIFVHGIVNGSYDVPFFVSRFREALFHYTALFDMLDTNVARQDPMRLMFEKE 236
Query: 465 MLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQANLVAKKFACGN 524
+ +I NI+A E ER R W+ R L + + + A N
Sbjct: 235 LFGREIVNIIACEGFERVERPQTYKQWQLRNMRNGFRLLPLDHRIIGKLKDRLRDDAHNN 56
Query: 525 SCTIDKNGKCLLIGWKG 541
+ ++ +G +L GWKG
Sbjct: 55 NFLLEVDGDWVLQGWKG 5
>TC228546 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial (60%)
Length = 1493
Score = 107 bits (266), Expect = 2e-23
Identities = 83/348 (23%), Positives = 157/348 (44%), Gaps = 11/348 (3%)
Frame = +3
Query: 215 GSAVQRVIFHFAQALQERINKENGTTLKGSD-ERVKERHLIELLEVDTNITILCHQKMPF 273
G +QR+ + + L+ R+ K E+ L+ + + +Q P+
Sbjct: 54 GDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSNDLMTYMHI-------LYQICPY 212
Query: 274 YQVMQFAGVQAILENVASGTKIHLININIGCGVMCTGLMQALSERQENPVEILKITAVGV 333
++ + I E + + ++I +I+ I G L+QAL+ R P + +T V
Sbjct: 213 WKFAYTSANAVIGEAMLNESRIRIIDFQIAQGTQWLLLIQALASRPGGP-PFVHVTGVDD 389
Query: 334 ANKTK-----IEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSP 388
+ + GKRL +A+S +PF ++ + E+++E ++ EA+ V P
Sbjct: 390 SQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGS-ELELENLVIQPGEALVVNFP 566
Query: 389 YFLRSLVSDSDSLEN----LMKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAY 444
+ L + +S S EN L+++++ + P ++ + E+N N+ F RFVE L YY+A
Sbjct: 567 FVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYTAM 746
Query: 445 FDCLDTCMKEEHECRMRIEE-MLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVET 503
F+ +D + + + R+ E+ ++ I N+VA E ER R + WR F+
Sbjct: 747 FESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERLERHELLGKWRSRFSMAGFAPC 926
Query: 504 RLSESAVYQANLVAKKFACGNSCTIDKNGKCLLIGWKGTPIHSISAWK 551
LS S + +F + + L +GWK + + SAW+
Sbjct: 927 PLSSSVTAAVRNMLNEF--NENYRLQHRDGALYLGWKSRAMCTSSAWR 1064
>TC229255 similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like protein, partial (37%)
Length = 1561
Score = 105 bits (261), Expect = 7e-23
Identities = 88/363 (24%), Positives = 174/363 (47%), Gaps = 12/363 (3%)
Frame = +1
Query: 200 ASFLLQNFQGNSPHHGSAVQRVIFHFAQALQERINKENGTTLKGSDERVKERHLIELLEV 259
A+ LL + +S G +QR+ +FA LQ R+ GT E +++ ++
Sbjct: 28 ANDLLSQIRQHSSAFGDGLQRLAHYFANGLQTRLAA--GTPSYTPLEGTTSADMLKAYKL 201
Query: 260 DTNITILCHQKMPFYQVMQFAGVQAILENVASGTKIHLININIGCGVMCTGLMQALSERQ 319
+ P ++ + + I+ V + +H+I+ I G L++ LSER
Sbjct: 202 YVTSS-------PLQRLTNYLATKTIVSLVENEGSVHIIDFGICYGFQWPCLIKKLSERH 360
Query: 320 ENPVEILKITAV-----GVANKTKIEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQ 374
P L+IT + G ++EETG+RL ++ + +PF YN + IK+
Sbjct: 361 GGPPR-LRITGIELPQPGFRPAERVEETGRRLANYCKKFKVPFEYNCL-AQKWETIKLAD 534
Query: 375 FDVEDDEAVAVYSPYFLRSLVSDSDSLEN----LMKVLRKIKPNIMINLGVEANHNSPSF 430
++ +E V Y L++L ++ +++ ++K++R+I PN+ I+ V +N+P F
Sbjct: 535 LKIDRNEVTVVSCFYRLKNLPDETVDVKSPRDAVLKLIRRINPNMFIHGVVNGTYNAPFF 714
Query: 431 VNRFVEALFYYSAYFDCLDTCMKEEHECRMRIEEMLSEKIRNIVAMEDRERTVRSVKIDV 490
+ RF EAL+++S+ FD + + E R+ + +++ + + D R + S ++
Sbjct: 715 LTRFREALYHFSSLFDMFEANVPREDP--ERVMPSML*RVKGLRGLRDL-RPISSGRLGT 885
Query: 491 WRRFFARYRMVETRLSESAVYQANLVAKKFACGN---SCTIDKNGKCLLIGWKGTPIHSI 547
R + + S+ +Y ++ KK+ N + ++GK + +GWKG +++I
Sbjct: 886 --------RELGSSKSDLILYW*-MMKKKW*RRNIKKDFVVAEDGKWVWLGWKGRILNAI 1038
Query: 548 SAW 550
SAW
Sbjct: 1039SAW 1047
>TC220761 similar to UP|Q7G7J6 (Q7G7J6) Gibberellin-insensitive protein
OsGAI, partial (23%)
Length = 719
Score = 103 bits (258), Expect = 2e-22
Identities = 68/212 (32%), Positives = 104/212 (48%), Gaps = 5/212 (2%)
Frame = +3
Query: 345 RLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFL-RSLVSDSD---- 399
RL A S+N+ F++ + ++K V +EAVAV S L R L SDSD
Sbjct: 12 RLAELAXSVNVRFAFRGVAAXXXEDVKPWMLQVNPNEAVAVNSIMQLHRLLASDSDPIGS 191
Query: 400 SLENLMKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKEEHECR 459
+E ++ +R + P I+ + EANHN F+ RF EAL YYS FD L+ C E +
Sbjct: 192 GIETVLGWIRSLNPKIISVVEQEANHNQDRFLERFTEALHYYSTVFDSLEACPVEPD--K 365
Query: 460 MRIEEMLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQANLVAKK 519
E L +I N+V+ E R R + WR + L +A QA+++
Sbjct: 366 ALAEMYLQREICNVVSSEGPARVERHEPLAKWRERLEKAGFKPLHLGSNAYKQASMLLTL 545
Query: 520 FACGNSCTIDKNGKCLLIGWKGTPIHSISAWK 551
F+ ++++N CL +GW P+ + SAW+
Sbjct: 546 FS-AEGYSVEENQGCLTLGWHSRPLIAASAWQ 638
>TC208938 weakly similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like protein,
partial (31%)
Length = 915
Score = 103 bits (256), Expect = 3e-22
Identities = 68/245 (27%), Positives = 121/245 (48%), Gaps = 9/245 (3%)
Frame = +2
Query: 315 LSERQENPVEI----LKITAVGVANKTKIEETGKRLMSFAESLNLPFSYNMIFVTDMMEI 370
LSER P ++ + + G ++EETG+ L + + +PF YN + I
Sbjct: 2 LSERPGGPPKLRMMGIDLPQPGFRPAERVEETGRWLEKYCKRFGVPFEYNCL-AQKWETI 178
Query: 371 KVEQFDVEDDEAVAVYSPYFLRSLVSDSDSL----ENLMKVLRKIKPNIMINLGVEANHN 426
++E ++ E V Y L++L ++ + + L++++R+I PNI ++ V +N
Sbjct: 179 RLEDLKIDRSEVTVVNCLYRLKNLSDETVTANCPRDALLRLIRRINPNIFMHGVVNGTYN 358
Query: 427 SPSFVNRFVEALFYYSAYFDCLDTCMKEEHECRMRIEE-MLSEKIRNIVAMEDRERTVRS 485
+P FV RF EALF++S+ FD + + E R+ IE+ + N++A E ER R
Sbjct: 359 APFFVTRFREALFHFSSLFDMFEANVPREDPSRLMIEKGLFGRDAINVIACEGAERVERP 538
Query: 486 VKIDVWRRFFARYRMVETRLSESAVYQANLVAKKFACGNSCTIDKNGKCLLIGWKGTPIH 545
W+ R + L+ V + + KK +D++GK +L GWKG +
Sbjct: 539 ETYKQWQVRNQRAGFKQLPLAPEHVNRVKEMVKK-EHHKDFVVDEDGKWVLQGWKGRILF 715
Query: 546 SISAW 550
++S+W
Sbjct: 716 AVSSW 730
>TC219179 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-like
(Phytochrome A signal transduction 1 protein), partial
(52%)
Length = 1025
Score = 102 bits (255), Expect = 3e-22
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 10/268 (3%)
Frame = +3
Query: 294 KIHLININIGCGVMCTGLMQALSERQENPVEILKITAV-----GVANKTKIEETGKRLMS 348
++H+I+ IG G L+QA + R P I +IT + A + G+RL
Sbjct: 12 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHI-RITGIDDSTSAYARGGGLHIVGRRLSK 188
Query: 349 FAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDSDSLEN----L 404
AE +PF ++ ++ ++++ V EA+AV + L + +S S +N L
Sbjct: 189 LAEHFKVPFEFHAAAISGF-DVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRL 365
Query: 405 MKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKEEHECRMRIEE 464
++++R + P ++ + E+N N+ +F RF+E L YY+A F+ +D + EH+ R+ +E+
Sbjct: 366 LRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYTAMFESIDVTLPREHKERINVEQ 545
Query: 465 -MLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQANLVAKKFACG 523
L+ + NI+A E ER R + WR FA LS + + ++
Sbjct: 546 HCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYS-- 719
Query: 524 NSCTIDKNGKCLLIGWKGTPIHSISAWK 551
+ +++ L +GW + + AWK
Sbjct: 720 DRYRLEERDGALYLGWMNRDLVASCAWK 803
>TC228139 similar to UP|Q8GVE1 (Q8GVE1) Chitin-inducible
gibberellin-responsive protein, partial (47%)
Length = 1497
Score = 101 bits (251), Expect = 1e-21
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 12/279 (4%)
Frame = +1
Query: 284 AILENVASGTKIHLININIGCGVMCTGLMQALSERQENPVEILKITAVG-----VANKTK 338
AI + + IH+I+ I G L+QAL+ R + +IT + A
Sbjct: 37 AIAQACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPHV-RITGIDDPVSKYARGDG 213
Query: 339 IEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDS 398
+E GKRL +E +P ++ + V + E D+ EA+AV P L +S
Sbjct: 214 LEVVGKRLALMSEKFGIPVEFHGVPVF-APNVTREMLDIRPGEALAVNFPLQLHHTADES 390
Query: 399 DSLEN----LMKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKE 454
+ N L++++R + P + + E+N N+ F NRF+E L YY A F+ +D +
Sbjct: 391 VHVSNPRDGLLRLVRSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPR 570
Query: 455 EHECRMRIEE-MLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQA 513
+ + R+ +E+ L+ I NI+A E +ER R W+ +R +M + + Y
Sbjct: 571 DSKERINVEQHCLARDIVNIIACEGKERVERHELFGKWK---SRLKMAGFQQCPLSSYVN 741
Query: 514 NLVAKKFACGNS--CTIDKNGKCLLIGWKGTPIHSISAW 550
+++ C + ++K+G +L+GWK + S SAW
Sbjct: 742 SVIRSLLMCYSEHYTLVEKDG-AMLLGWKDRNLISASAW 855
>TC231668 homologue to UP|Q9AVK4 (Q9AVK4) SCARECROW, partial (28%)
Length = 706
Score = 100 bits (249), Expect = 2e-21
Identities = 74/229 (32%), Positives = 122/229 (52%), Gaps = 1/229 (0%)
Frame = +3
Query: 326 LKITAVGVANKTKIEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAV 385
+++T +G + + +E TGKRL FA L LPF + + + + E+ +V EAVAV
Sbjct: 18 VRLTGLGTSMEA-LEATGKRLSDFANKLGLPFEFFPV-AEKVGNLDPERLNVSKTEAVAV 191
Query: 386 YSPYFLRSLVSDSDSLENLMKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYF 445
+ + SL + S N + +L+++ P ++ + + + N+ SF+ RFVEA+ YYSA F
Sbjct: 192 H--WLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLS-NTGSFLGRFVEAIHYYSALF 362
Query: 446 DCLDTCMKEEHECRMRIE-EMLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETR 504
D L + EE E R +E ++LS +IRN++A+ RT K WR +
Sbjct: 363 DSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRT-GEPKFHNWREKLQQCGFRGIS 539
Query: 505 LSESAVYQANLVAKKFACGNSCTIDKNGKCLLIGWKGTPIHSISAWKFP 553
L+ +A QA+L+ F ++ NG L +GWK + + SAW+ P
Sbjct: 540 LAGNAATQASLLLGMFPSEGYTLVEDNG-ILKLGWKDLCLLTASAWRPP 683
>TC211103 weakly similar to UP|Q6S5L6 (Q6S5L6) GAI protein, partial (27%)
Length = 807
Score = 100 bits (249), Expect = 2e-21
Identities = 63/206 (30%), Positives = 99/206 (47%)
Frame = +3
Query: 346 LMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDSDSLENLM 405
L A S+N+ F++ + + ++K V +EAVAV S L L + ++E ++
Sbjct: 3 LAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSPNEAVAVNSIMQLHRLTAVKSAVEEVL 182
Query: 406 KVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKEEHECRMRIEEM 465
+R + P I+ + EANHN F+ RF EAL YYS FD LD C E + + E
Sbjct: 183 GWIRILNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLDACPVEPDKAAL-AEMY 359
Query: 466 LSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQANLVAKKFACGNS 525
L +I N+V E R R + WR + L +A QA+++ F+
Sbjct: 360 LQREICNVVCCEGPARLERHEPLAKWRDRLGKAGFRPLHLGFNAYKQASMLLTLFSAEGF 539
Query: 526 CTIDKNGKCLLIGWKGTPIHSISAWK 551
C + +N L +GW P+ + SAW+
Sbjct: 540 C-VQENQGSLTLGWHSRPLIAASAWQ 614
>TC209743 similar to PIR|E86347|E86347 scarecrow-like 1 protein F24J8.8 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(47%)
Length = 1078
Score = 95.5 bits (236), Expect = 5e-20
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 12/282 (4%)
Frame = +1
Query: 284 AILENVASGTKIHLININIGCGVMCTGLMQALSERQENPVEILKITAVGVANKTK----- 338
AI E V K+H+I+ +I G L+Q L+ P + ++TAV +
Sbjct: 22 AIAEVVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPPHV-RLTAVDDPESVQRSIGG 198
Query: 339 IEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSL---- 394
I G+RL AE L LPF + + + + + EA+ V + L +
Sbjct: 199 INIIGQRLEKLAEELRLPFEFRAV-ASRTSNVTQSMLNCRPGEALVVNFAFQLHHMRDET 375
Query: 395 VSDSDSLENLMKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKE 454
VS + + L+++++ + P I+ + + N N+ F+ RF+E YYSA F+ LD +
Sbjct: 376 VSTVNERDQLLRMVKSLNPKIVTVVEQDMNTNTSPFLPRFIETYNYYSAVFNTLDATLPR 555
Query: 455 EHECRMRIE-EMLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQA 513
E + RM +E + L++ I NIVA E ER R WR + + +S + V +A
Sbjct: 556 ESQDRMNVERQCLAKDIVNIVACEGEERIERYEVAGKWRARLSMAGFTPSPMSTN-VREA 732
Query: 514 --NLVAKKFACGNSCTIDKNGKCLLIGWKGTPIHSISAWKFP 553
NL+ K++ + I + L GW+ + SAWK P
Sbjct: 733 IRNLIIKQYC--DKFKIKEEMGGLHFGWEDKNLIVASAWK*P 852
>TC210169 similar to UP|Q8L553 (Q8L553) SCARECROW transcriptional
regulator-like, partial (47%)
Length = 872
Score = 93.2 bits (230), Expect = 3e-19
Identities = 64/194 (32%), Positives = 92/194 (46%), Gaps = 5/194 (2%)
Frame = +1
Query: 362 IFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDSDSLEN----LMKVLRKIKPNIMI 417
+ + + E+ E D + DEA+AV Y L + +S S EN L++ ++ + P ++
Sbjct: 103 VLIRRIAELTRESLDCDADEALAVNFAYKLYRMPDESVSTENPRDELLRRVKALAPRVVT 282
Query: 418 NLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKEEHECRMRIEEMLSEKIRNIVAME 477
+ EAN N+ FV R E YY A FD L++ M E+ R+RIEE LS K+ N VA E
Sbjct: 283 LVEQEANANTAPFVARVSELCAYYGALFDSLESTMARENSARVRIEEGLSRKVGNSVACE 462
Query: 478 DRERTVRSVKIDVWRRFFARYRMVETRLSE-SAVYQANLVAKKFACGNSCTIDKNGKCLL 536
R R R WR AR M RL S ++ A+ GN + +
Sbjct: 463 GRNRVERCEVFGKWR---ARMSMAGFRLKPLSQRVAESIKARLGGAGNRVAVKVENGGIC 633
Query: 537 IGWKGTPIHSISAW 550
GW G + SAW
Sbjct: 634 FGWMGRTLTVASAW 675
>TC230486 similar to UP|Q8L553 (Q8L553) SCARECROW transcriptional
regulator-like, partial (44%)
Length = 886
Score = 92.0 bits (227), Expect = 6e-19
Identities = 71/222 (31%), Positives = 105/222 (46%), Gaps = 5/222 (2%)
Frame = +2
Query: 334 ANKTKIEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRS 393
A+ ++ G L AE L + F + ++ + E+ E + DE +AV Y L
Sbjct: 29 ADDERLNIVGVLLGRHAEKLGIGFEFKVL-TRRIAELTRESLGCDADEPLAVNFAYKLYR 205
Query: 394 LVSDSDSLENLM-KVLRKIK---PNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLD 449
+ +S S EN K+LR++K P ++ + +AN N+ FV R E YY A FD L+
Sbjct: 206 MPDESVSTENPRDKLLRRVKTLAPRVVTLVEQDANANTAPFVARVTELCAYYGALFDSLE 385
Query: 450 TCMKEEHECRMRIEEMLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESA 509
+ M E+ R+RIEE LS K+ N VA E R+R R WR AR M RL +
Sbjct: 386 STMARENLKRVRIEEGLSRKVVNSVACEGRDRVERCEVFGKWR---ARMSMAGFRLKPLS 556
Query: 510 VYQANLV-AKKFACGNSCTIDKNGKCLLIGWKGTPIHSISAW 550
A+ + A+ GN + + GW G + SAW
Sbjct: 557 QRVADSIKARLGGAGNRVAVKVENGGICFGWMGRTLTVASAW 682
>TC220187 similar to PIR|E86347|E86347 scarecrow-like 1 protein F24J8.8 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(39%)
Length = 810
Score = 88.6 bits (218), Expect = 7e-18
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 5/220 (2%)
Frame = +3
Query: 339 IEETGKRLMSFAESLNLPFSYNMIFVTDMMEIKVEQFDVEDDEAVAVYSPYFLRSLVSDS 398
++ G+RL AE+L LPF + + + + + DEA+ V + L + +S
Sbjct: 45 LQNIGQRLEKLAEALGLPFEFRAVASRTSI-VTPSMLNCSPDEALVVNFAFQLHHMPDES 221
Query: 399 DSLEN----LMKVLRKIKPNIMINLGVEANHNSPSFVNRFVEALFYYSAYFDCLDTCMKE 454
S N L+++++ + P ++ + + N N+ F+ RFVEA YYSA F+ LD +
Sbjct: 222 VSTANERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDATLPR 401
Query: 455 EHECRMRIE-EMLSEKIRNIVAMEDRERTVRSVKIDVWRRFFARYRMVETRLSESAVYQA 513
E + RM +E + L+ I N+VA E +R R WR + +S + +
Sbjct: 402 ESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEI 581
Query: 514 NLVAKKFACGNSCTIDKNGKCLLIGWKGTPIHSISAWKFP 553
+ K C ++ G L GW+ + SAWK P
Sbjct: 582 RKLIKTVYCDRYKIKEEMG-ALHFGWEDKNLIVASAWKLP 698
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,293,354
Number of Sequences: 63676
Number of extensions: 327371
Number of successful extensions: 1989
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of query: 553
length of database: 12,639,632
effective HSP length: 102
effective length of query: 451
effective length of database: 6,144,680
effective search space: 2771250680
effective search space used: 2771250680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0239.10