TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0237.14
         (1754 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AI960492                                                              148  2e-35
AW570169                                                               45  3e-04
TC207977                                                               36  0.13
TC205520 ferredoxin:sulfite reductase precursor [Glycine max]          33  1.1
TC215926                                                               33  1.4
CO982321                                                               32  3.2
TC205959 similar to UP|ACPM_ARATH (P53665) Acyl carrier protein,...    30  7.1
TC219755                                                               30  7.1

>AI960492 
          Length = 391

 Score =  148 bits (373), Expect = 2e-35
 Identities = 70/80 (87%), Positives = 76/80 (94%), Gaps = 2/80 (2%)
 Frame = +2

Query: 466 DLLELADCCKAKKLHLIYDKREHPRQSLLQHNLGEFQGPALVAIFEGACLSREEFSNFQL 525
           DLLELADCCKAK+LHLIYDKREHPRQSLLQHNLGEFQGPALVAIFE ACLSREEFSNFQL
Sbjct: 8   DLLELADCCKAKRLHLIYDKREHPRQSLLQHNLGEFQGPALVAIFECACLSREEFSNFQL 187

Query: 526 LPPWKLRGNTLN--YGLGLV 543
            PPW+LRGNT+N  +G+GL+
Sbjct: 188 RPPWRLRGNTIN*WFGIGLL 247



 Score = 90.1 bits (222), Expect = 8e-18
 Identities = 43/52 (82%), Positives = 45/52 (85%)
 Frame = +3

Query: 536 LNYGLGLVGCYSICDLLSVVSGGYFYMFDPRGLVLSAPSSNAPSGKMFSLIG 587
           L  GLGLV CYSICDLLSV+SGGYFYMFDPRG VL APS+N PS KMFSLIG
Sbjct: 219 LTNGLGLVCCYSICDLLSVISGGYFYMFDPRG*VLGAPSTNPPSAKMFSLIG 374


>AW570169 
          Length = 366

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 23/60 (38%), Positives = 36/60 (59%)
 Frame = +2

Query: 449 KVSELLALYGNSEFLLFDLLELADCCKAKKLHLIYDKREHPRQSLLQHNLGEFQGPALVA 508
           ++ E+L  Y     +L +L++ AD   A  + L  D+R HP  SLL  +L ++QGPAL+A
Sbjct: 179 RIREVLLNYPEGTTVLKELIQNADDAGATTVSLCLDRRSHPAGSLLSDSLAQWQGPALLA 358


>TC207977 
          Length = 763

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 15/124 (12%)
 Frame = +2

Query: 1145 SIAAELKGLPCPTATNHLQKLGLTELWIGNKEQQSLMDPLREKFVHPKVLERPLLGEIFS 1204
            SIA  L+   CP  T+HLQ L  T L   + E   L         HP +L     GE+  
Sbjct: 137  SIAIFLQVCQCPQ-TDHLQCLVGTHLLHLHLENPKLHHN------HPLLLGE---GEVGV 286

Query: 1205 NLSLQGLLKLQNFSL--------HLLANHMKLIFHEDWVNHVMGSNMAP-------WLSW 1249
            +L L G L +Q   L         L+ NH+  IFH + +   + +N  P       WL+ 
Sbjct: 287  HLVLSGPLSMQRNHLLLRIRVNQFLMKNHLATIFHRNMIGFFLKTNSYPKMLVLTKWLTH 466

Query: 1250 KKLP 1253
            K +P
Sbjct: 467  KLIP 478


>TC205520 ferredoxin:sulfite reductase precursor [Glycine max]
          Length = 2633

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +3

Query: 209 DCPNIGVLSRQLIELSKSYQQLKTHSLLDPDFDVKLQKEIPCLYSKLQEYINTDDFND 266
           D PNI   + QLI+   SYQQ          +   ++ + PC     Q Y+  DD  D
Sbjct: 354 DAPNISEAATQLIKFHGSYQQYNREERGSRSYSFMIRTKNPCGKVSNQLYLTMDDLAD 527


>TC215926 
          Length = 1915

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 24/71 (33%), Positives = 35/71 (48%), Gaps = 1/71 (1%)
 Frame = +2

Query: 1161 HLQKLGLTELWIGNKEQQSLMDPLREKFVHP-KVLERPLLGEIFSNLSLQGLLKLQNFSL 1219
            H Q LGL   W+G+  Q            HP K L+  LL E+FS ++LQGL   +   +
Sbjct: 494  HSQLLGL---WVGDLSQDLFPRISFRIQFHPFKWLKHYLLQELFSPITLQGLKLTRQLLI 664

Query: 1220 HLLANHMKLIF 1230
             L+   + L+F
Sbjct: 665  RLVLFRLMLVF 697


>CO982321 
          Length = 777

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 21/66 (31%), Positives = 34/66 (50%)
 Frame = +2

Query: 1013 DLLKVSSKPIVLRSVDMYIDVLEYCLSNFQQSVPSSLPRDSAQVDPTNINVICRETDVGS 1072
            DL ++ + P +L ++        YC ++   SVP SLPR S    P  I++I  +    +
Sbjct: 596  DLTRIIATPGILTAIG-------YCCASQNTSVPGSLPRVSVPA-PIEIHIIFVKDIPTA 751

Query: 1073 TSQPES 1078
            TS+P S
Sbjct: 752  TSRPSS 769


>TC205959 similar to UP|ACPM_ARATH (P53665) Acyl carrier protein,
           mitochondrial precursor (ACP) (NADH-ubiquinone
           oxidoreductase 9.6 kDa subunit) (MtACP-1), partial (68%)
          Length = 624

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 783 IMTPLPLSGCINLPVTVLGCFLVC 806
           +M  L +S  +NLP+T  GC LVC
Sbjct: 435 LMLNLSISATLNLPLTFTGCLLVC 506


>TC219755 
          Length = 732

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 14/37 (37%), Positives = 25/37 (66%)
 Frame = -3

Query: 1259 GGPSSEWIKIFWKSFRGSQEELSLFSDWPLIPAFLGR 1295
            G P+SE   +F+   RG++ ELS+F+DW ++   +G+
Sbjct: 145  GAPASENGVVFF--VRGNEVELSVFNDWAIVEESVGQ 41


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.320    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,066,349
Number of Sequences: 63676
Number of extensions: 1299317
Number of successful extensions: 5932
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5932
length of query: 1754
length of database: 12,639,632
effective HSP length: 111
effective length of query: 1643
effective length of database: 5,571,596
effective search space: 9154132228
effective search space used: 9154132228
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)