Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0226.11
         (231 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC213905                                                              107  3e-24
TC233522                                                               87  8e-18
TC205377                                                               85  3e-17
TC205379                                                               79  1e-15
TC205382                                                               79  1e-15
TC221763 similar to UP|O49561 (O49561) Gibberellin 20-oxidase-li...    76  1e-14
TC221474 homologue to UP|O04281 (O04281) Gibberellin 20-oxidase ...    73  1e-13
TC208325 similar to GB|AAQ65160.1|34365697|BT010537 At4g10500 {A...    71  5e-13
TC217747 similar to UP|Q9FFF6 (Q9FFF6) Leucoanthocyanidin dioxyg...    70  8e-13
TC207871 similar to UP|O82017 (O82017) Adventitious rooting rela...    69  1e-12
TC217748                                                               69  2e-12
TC223554 weakly similar to UP|Q9FXW0 (Q9FXW0) Gibberellin 3b-hyd...    67  5e-12
TC226020 similar to UP|Q9SP53 (Q9SP53) Flavanone 3-hydroxylase, ...    67  9e-12
TC216796 similar to GB|AAQ65160.1|34365697|BT010537 At4g10500 {A...    66  1e-11
TC234107 similar to UP|G2O2_PEA (Q9XHM5) Gibberellin 2-beta-diox...    65  2e-11
TC225815                                                               65  2e-11
TC227113                                                               65  2e-11
TC220111 similar to PIR|T49209|T49209 leucoanthocyanidin dioxyge...    64  4e-11
TC230890 similar to UP|Q8LA31 (Q8LA31) Naringenin 3-dioxygenase ...    64  8e-11
TC229614 similar to UP|O48631 (O48631) Ethylene-forming-enzyme-l...    64  8e-11

>TC213905 
          Length = 530

 Score =  107 bits (268), Expect = 3e-24
 Identities = 59/113 (52%), Positives = 72/113 (63%)
 Frame = +1

Query: 116 DTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWS 175
           + ++G   HTD +  TIL Q+ V+ L V T +G  WI    SS + SF+VM  D   AWS
Sbjct: 1   EPQLGFVAHTDKSFTTILHQNHVNALMVETTNGN-WIDVDFSSPT-SFVVMAGDALMAWS 174

Query: 176 NGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPFD 228
           N R+ SP H VMM GNE RYS  LF   +G  I+K PEEL+DEEHPL YKPFD
Sbjct: 175 NDRIKSPNHMVMMNGNETRYSLGLFAFYRG--ILKVPEELIDEEHPLQYKPFD 327


>TC233522 
          Length = 800

 Score = 86.7 bits (213), Expect = 8e-18
 Identities = 49/121 (40%), Positives = 69/121 (56%)
 Frame = +1

Query: 108 KYKGPQTSDTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMM 167
           KY+  +  +T +G+  HTD+  LTIL Q +++GLE+  KDG +W  +K  +      V+ 
Sbjct: 22  KYRTXKGGETNLGVHPHTDSGFLTILNQ-KLNGLEIQLKDG-EW--FKVDASPNMXAVLA 189

Query: 168 NDCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPF 227
            D F  WSN R+    H+V M     RY   L  +   G +++  EELVDEEHPL YKPF
Sbjct: 190 GDAFMVWSNDRIRGCVHQVFMNSKVDRYCLGL--LSYAGKVMEPEEELVDEEHPLRYKPF 363

Query: 228 D 228
           D
Sbjct: 364 D 366


>TC205377 
          Length = 1345

 Score = 84.7 bits (208), Expect = 3e-17
 Identities = 44/127 (34%), Positives = 68/127 (52%)
 Frame = +3

Query: 101 TYFLKTMKYKGPQTSDTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSES 160
           T F++   Y      D  +G+  H D   LTIL Q +V GLEV  K  ++WI  KP+ ++
Sbjct: 681 TSFIRLNHYPPCPYPDLALGVGRHKDPGALTILAQDEVGGLEVRRKADQEWIRVKPTPDA 860

Query: 161 QSFIVMMNDCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEH 220
             +I+ + D    WSN    S  HRV++   + R+S   FF P     +K  EEL++E++
Sbjct: 861 --YIINIGDTVQVWSNDAYESVDHRVVVNSEKERFSIPFFFFPAHDTEVKPLEELINEQN 1034

Query: 221 PLLYKPF 227
           P  Y+P+
Sbjct: 1035PSKYRPY 1055


>TC205379 
          Length = 774

 Score = 79.3 bits (194), Expect = 1e-15
 Identities = 40/109 (36%), Positives = 60/109 (54%)
 Frame = +2

Query: 119 VGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGR 178
           +G+  H D   LT+L Q +V GLEV  K  ++WI  KP+ ++  +I+ + D    WSN  
Sbjct: 161 LGVGRHKDGGALTVLAQDEVGGLEVKRKADQEWIRVKPTPDA--YIINVGDLIQVWSNDA 334

Query: 179 LHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPF 227
             S  HRVM+   + R+S   FF P     +K  EEL +E +P  Y+P+
Sbjct: 335 YESVEHRVMVNSEKERFSIPFFFNPAHDIEVKPLEELTNEHNPSKYRPY 481


>TC205382 
          Length = 613

 Score = 79.3 bits (194), Expect = 1e-15
 Identities = 40/108 (37%), Positives = 61/108 (56%)
 Frame = +2

Query: 119 VGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGR 178
           +G+  H D   LTIL Q +V GLEV  K  ++WI  KP+ ++  +I+ + D    WSN  
Sbjct: 296 LGVARHKDPGALTILAQDEVGGLEVKRKADQEWIGVKPTLDA--YIINVGDIIQVWSNDA 469

Query: 179 LHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKP 226
             S  HRV++   + R+S   FF P     +K  EEL++E++P  Y+P
Sbjct: 470 YESVEHRVVVNSEKERFSIPFFFYPAHETEVKPLEELINEQNPSKYRP 613


>TC221763 similar to UP|O49561 (O49561) Gibberellin 20-oxidase-like protein,
           partial (54%)
          Length = 782

 Score = 76.3 bits (186), Expect = 1e-14
 Identities = 51/135 (37%), Positives = 69/135 (50%)
 Frame = +1

Query: 93  FRYASQPITYFLKTMKYKGPQTSDTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWI 152
           F+    P T +L+  +Y          GL  HTD+  LTIL+Q QV GL+ L KD  KWI
Sbjct: 43  FKENCLPNTCYLRLNRYPPCPIGFGIHGLMPHTDSDFLTILYQDQVGGLQ-LVKDS-KWI 216

Query: 153 SYKPSSESQSFIVMMNDCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAP 212
           + KP+ ++   I+ + D F AWSNG   S  HRVM      R+S A FF P    +I++ 
Sbjct: 217 AVKPNPDA--LIINIGDLFQAWSNGVYKSVEHRVMTNPKLERFSMAYFFCPSNDTVIESC 390

Query: 213 EELVDEEHPLLYKPF 227
            E      P  Y+ F
Sbjct: 391 RE------PSFYRKF 417


>TC221474 homologue to UP|O04281 (O04281) Gibberellin 20-oxidase , partial
           (34%)
          Length = 410

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 43/109 (39%), Positives = 56/109 (50%)
 Frame = +3

Query: 119 VGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGR 178
           +G   H D   LTIL Q QV GL+V   +  +W S KP  +  +F+V + D F A SNGR
Sbjct: 3   LGTGPHCDPTSLTILHQDQVGGLQVCVDN--EWHSIKP--DLNAFVVNVGDTFMALSNGR 170

Query: 179 LHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPF 227
             S  HR ++     R S A F  P+   ++  P ELVD   P LY  F
Sbjct: 171 YKSCLHRAVVNSQTTRKSLAFFLCPRSDKVVSPPCELVDNLSPRLYPDF 317


>TC208325 similar to GB|AAQ65160.1|34365697|BT010537 At4g10500 {Arabidopsis
           thaliana;} , partial (32%)
          Length = 640

 Score = 70.9 bits (172), Expect = 5e-13
 Identities = 43/108 (39%), Positives = 57/108 (51%)
 Frame = +3

Query: 120 GLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGRL 179
           GL  H D   +TIL Q+QV GL+VL  DG KW++  P   +  FIV + D     SN R 
Sbjct: 54  GLPAHADPNAITILLQNQVPGLQVL-HDG-KWLTVNPVPNT--FIVNIADQIQVISNDRY 221

Query: 180 HSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPF 227
            S  HR ++   + R S   F+ P    +IK   +LVD+EHP  Y  F
Sbjct: 222 KSVLHRALVNCEKERMSIPTFYCPSPDALIKPAPQLVDKEHPAQYTNF 365


>TC217747 similar to UP|Q9FFF6 (Q9FFF6) Leucoanthocyanidin dioxygenase-like
           protein (AT5g05600/MOP10_14), partial (53%)
          Length = 713

 Score = 70.1 bits (170), Expect = 8e-13
 Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = +1

Query: 110 KGPQTSDTKVGLDTHTDTAILTILFQSQ-VDGLEVLTKDGRKWISYKPSSESQSFIVMMN 168
           K PQ  D   GL  H+D   +TIL     V GL+V  + G +WI+ KP   +  FI+ + 
Sbjct: 187 KCPQP-DLTFGLSPHSDPGGMTILLPDDFVSGLQV--RRGDEWITVKPVPNA--FIINIG 351

Query: 169 DCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPFD 228
           D     SN    S  HRV++  N+ R S ALF+ P+   +I+  +ELV EE P LY P  
Sbjct: 352 DQIQVLSNAIYKSVEHRVIVNSNKDRVSLALFYNPRSDLLIQPAKELVTEEKPALYSPMT 531

Query: 229 RED 231
            ++
Sbjct: 532 YDE 540


>TC207871 similar to UP|O82017 (O82017) Adventitious rooting related
           oxygenase, partial (41%)
          Length = 611

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
 Frame = +2

Query: 120 GLDTHTDTAILTILFQSQ-VDGLEVLTKDGRKWISYKPSSESQ-SFIVMMNDCFHAWSNG 177
           G+  HTD+  LTIL   + V GLEVL        S+ P      S +V + D    WSNG
Sbjct: 26  GVQIHTDSGFLTILQDDENVGGLEVLHSS----TSFVPIPLFPGSLLVNLGDIARVWSNG 193

Query: 178 RLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPFDRED 231
           R  +  HRV       R+S A F +      ++AP ELVD +HP LY+PF  ED
Sbjct: 194 RFCNLTHRVQCKEATKRFSIATFMIAPRNRNVEAPAELVDHDHPRLYQPFIYED 355


>TC217748 
          Length = 1003

 Score = 68.9 bits (167), Expect = 2e-12
 Identities = 44/123 (35%), Positives = 64/123 (51%), Gaps = 1/123 (0%)
 Frame = +1

Query: 110 KGPQTSDTKVGLDTHTDTAILTILFQSQ-VDGLEVLTKDGRKWISYKPSSESQSFIVMMN 168
           K PQ  D   GL  H+D   +TIL     V GL+V  + G +W+  KP   +  F++ + 
Sbjct: 352 KCPQP-DLTFGLSPHSDPGGMTILLSDDFVSGLQV--RRGDEWVIVKPVPNA--FVINIG 516

Query: 169 DCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPFD 228
           D     SN    S  HRV++  N+ R S ALF+ P+   +I+  +ELV EE P LY P  
Sbjct: 517 DQIQVLSNAIYKSVEHRVIVNSNKDRVSLALFYNPRSDLLIQPAKELVTEERPALYSPMT 696

Query: 229 RED 231
            ++
Sbjct: 697 YDE 705


>TC223554 weakly similar to UP|Q9FXW0 (Q9FXW0) Gibberellin 3b-hydroxylase
           No3, partial (36%)
          Length = 614

 Score = 67.4 bits (163), Expect = 5e-12
 Identities = 33/85 (38%), Positives = 48/85 (55%)
 Frame = +3

Query: 119 VGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGR 178
           +GL  HTDT++ TIL QS++ GL++  K+G++W+   P     + +V   D  H  SN R
Sbjct: 177 MGLAPHTDTSLFTILHQSRITGLQIF-KEGKEWVPVHP--HPNTLVVHTGDLLHIISNAR 347

Query: 179 LHSPFHRVMMTGNEARYSAALFFVP 203
             S  HRV +     RYS A F+ P
Sbjct: 348 FRSALHRVTVNSTRERYSVAYFYSP 422


>TC226020 similar to UP|Q9SP53 (Q9SP53) Flavanone 3-hydroxylase, partial
           (93%)
          Length = 1441

 Score = 66.6 bits (161), Expect = 9e-12
 Identities = 39/117 (33%), Positives = 62/117 (52%)
 Frame = +3

Query: 110 KGPQTSDTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMND 169
           K PQ  D  +GL  HTD   +T+L Q QV GL+    +G+ WI+ +P     +F+V + D
Sbjct: 678 KCPQP-DLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQP--VEAAFVVNLGD 848

Query: 170 CFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKP 226
             H  SNGR  +  H+ ++  N +R S A F  P     +  P ++ + E P++ +P
Sbjct: 849 HAHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPNATV-YPLKIREGEKPVMEEP 1016


>TC216796 similar to GB|AAQ65160.1|34365697|BT010537 At4g10500 {Arabidopsis
           thaliana;} , partial (72%)
          Length = 1454

 Score = 66.2 bits (160), Expect = 1e-11
 Identities = 41/109 (37%), Positives = 57/109 (51%), Gaps = 1/109 (0%)
 Frame = +1

Query: 120 GLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAWSNGRL 179
           GL  HTD  ++TIL Q +V GL+VL KDG KW++  P   +  F+V + D     SN + 
Sbjct: 745 GLPGHTDPTVITILLQDEVPGLQVL-KDG-KWVAVNPIPNT--FVVNVGDQIQVISNDKY 912

Query: 180 HSPFHRVMMTGNEARYSAALFFVPKGGCII-KAPEELVDEEHPLLYKPF 227
            S  HR ++  N+ R S   F+ P    II  AP+ +    HP  Y  F
Sbjct: 913 KSVLHRAVVNCNKDRISIPTFYFPSNDAIIGPAPQLIHHHHHPPQYNNF 1059


>TC234107 similar to UP|G2O2_PEA (Q9XHM5) Gibberellin 2-beta-dioxygenase 2
           (Gibberellin 2-beta-hydroxylase 2) (Gibberellin
           2-oxidase 2) (GA 2-oxidase 2) , partial (40%)
          Length = 687

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 40/113 (35%), Positives = 55/113 (48%)
 Frame = +3

Query: 115 SDTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAW 174
           ++  +G   H+D  ILTI+  + VDGL++ T DG  WI   P  +     VM+ D     
Sbjct: 33  NNNNIGXXEHSDPQILTIMRSNNVDGLQISTHDGL-WIPVPP--DPNEXXVMVGDALQVL 203

Query: 175 SNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKPF 227
           +NGR  S  HRV+    +AR S   F  P     I     +V   +P LYKPF
Sbjct: 204 TNGRFASVRHRVLTNTTKARMSMMYFAAPPLNRWITPLPMMVTPHNPSLYKPF 362


>TC225815 
          Length = 945

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 40/132 (30%), Positives = 66/132 (49%), Gaps = 2/132 (1%)
 Frame = +3

Query: 102 YFLKTMKYKGPQTSDTKVGLDTHTDTAILTILFQSQ-VDGLEVLTKDGR-KWISYKPSSE 159
           + L+T+K+          G   H+DT  +T+L   + V GLE++   G  K +   P + 
Sbjct: 153 FILRTIKFSFTPDVIGSTGAQLHSDTGFITLLQDDEHVSGLEMMDDFGSFKAVPPIPGA- 329

Query: 160 SQSFIVMMNDCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEE 219
              F+ ++ D  H WSNG+  +  HRV+      RYS   F +      ++AP++LV+ +
Sbjct: 330 ---FLCIVGDVGHVWSNGKFWNARHRVICKETGTRYSFGAFMLSPRDGNVEAPKKLVEVD 500

Query: 220 HPLLYKPFDRED 231
           H   Y+PF  ED
Sbjct: 501 HVQRYRPFKYED 536


>TC227113 
          Length = 1270

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = +2

Query: 103 FLKTMKYKGPQTSDTKV-GLDTHTDTAILTILFQSQVDGLEVLT-KDGRKWISYKPSSES 160
           FL+ + Y G   SD ++ G   H+D  ++T+L    V GL++   K  +  +        
Sbjct: 512 FLRLLHYPGELGSDEQICGASPHSDYGMITLLMTDGVPGLQICKDKVNQPQVWEDVPHVE 691

Query: 161 QSFIVMMNDCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEH 220
            + IV + D    W+N    S  HRVM TG E RYS A FF P   C+++  E    E  
Sbjct: 692 GALIVNIGDMMERWTNCLYRSTLHRVMPTGKE-RYSVAFFFDPASDCVVECFESCCSESS 868

Query: 221 PLLYKPFDRED 231
           P  + P    D
Sbjct: 869 PPRFSPIRSGD 901


>TC220111 similar to PIR|T49209|T49209 leucoanthocyanidin dioxygenase-like
           protein - Arabidopsis thaliana {Arabidopsis thaliana;} ,
           partial (43%)
          Length = 786

 Score = 64.3 bits (155), Expect = 4e-11
 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = +3

Query: 110 KGPQTSDTKVGLDTHTDTAILTILFQSQ-VDGLEVLTKDGRKWISYKPSSESQSFIVMMN 168
           K PQ  D  +GL  H+D   +TIL   + V GL+V  + G  WI+ KP   +  FI+ M 
Sbjct: 186 KCPQP-DLTLGLSPHSDPGGMTILLPDENVSGLQV--RRGEDWITVKPVPNA--FIINMG 350

Query: 169 DCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKP 226
           D     SN    S  HRV++  ++ R S A F+ P+    I+  +ELV ++ P LY P
Sbjct: 351 DQIQVLSNAIYKSIEHRVIVNSDKDRVSLAFFYNPRSDIPIQPAKELVTKDRPALYPP 524


>TC230890 similar to UP|Q8LA31 (Q8LA31) Naringenin 3-dioxygenase like
           protein, partial (64%)
          Length = 677

 Score = 63.5 bits (153), Expect = 8e-11
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
 Frame = +1

Query: 106 TMKYKGP-QTSDTKVGLDTHTDTAILTILFQSQVDGLEVLTKDGRKWISYKPSSESQSFI 164
           T+ Y  P    D  +GL +H+D   +T+L Q  V GL+VL K   KW++ +P S++   +
Sbjct: 79  TISYYPPCPEPDLTLGLQSHSDMGAITLLIQDDVGGLQVL-KGSDKWVTVQPLSDA--VL 249

Query: 165 VMMNDCFHAWSNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLY 224
           V++ D     +NG+  S  HR +   + AR S A F  P     I    EL+++  P  Y
Sbjct: 250 VLLADQTEIITNGKYRSCEHRAITNPDRARLSVATFHDPAKTAKISPASELINDSSPAKY 429

Query: 225 K 225
           +
Sbjct: 430 R 432


>TC229614 similar to UP|O48631 (O48631) Ethylene-forming-enzyme-like
           dioxygenase, partial (52%)
          Length = 1289

 Score = 63.5 bits (153), Expect = 8e-11
 Identities = 38/112 (33%), Positives = 61/112 (53%), Gaps = 1/112 (0%)
 Frame = +1

Query: 116 DTKVGLDTHTDTAILTILFQS-QVDGLEVLTKDGRKWISYKPSSESQSFIVMMNDCFHAW 174
           D  +G+  H D + +T L Q  +V+GL+VL  D  +W  +K      + ++ + D     
Sbjct: 673 DHVLGVKPHADGSTITFLLQDKEVEGLQVLKDD--QW--FKVPIIPDALLINVGDQIEIM 840

Query: 175 SNGRLHSPFHRVMMTGNEARYSAALFFVPKGGCIIKAPEELVDEEHPLLYKP 226
           SNG   SP HRV++   + R + A+F VP     IK  ++LV+E  P+LY+P
Sbjct: 841 SNGIFRSPVHRVVINKAKERLTVAMFCVPDSEKEIKPVDKLVNESRPVLYRP 996


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.135    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,344,350
Number of Sequences: 63676
Number of extensions: 140010
Number of successful extensions: 761
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of query: 231
length of database: 12,639,632
effective HSP length: 94
effective length of query: 137
effective length of database: 6,654,088
effective search space: 911610056
effective search space used: 911610056
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)


Lotus: description of TM0226.11