BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0221.11
(142 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC205988 UP|PM1_SOYBN (Q01417) 18 kDa seed maturation protein, c... 210 2e-55
TC207049 UP|Q01527 (Q01527) Maturation protein (Soybean seed mat... 179 4e-46
AW733897 similar to SP|Q01417|PM1_ 18 kDa seed maturation protei... 69 6e-13
TC226209 UP|Q9XET0 (Q9XET0) Seed maturation protein PM30, complete 38 0.001
TC203463 weakly similar to UP|Q8IMS9 (Q8IMS9) CG31439-PA, partia... 35 0.012
TC216904 UP|P93166 (P93166) SCOF-1, complete 33 0.045
BQ253503 weakly similar to GP|22831720|gb CG6775-PA {Drosophila ... 33 0.059
TC214570 homologue to PIR|T05766|T05766 peptidylprolyl isomerase... 33 0.059
TC209064 similar to UP|P93166 (P93166) SCOF-1, partial (93%) 33 0.059
CO985160 32 0.10
TC227495 similar to UP|P93273 (P93273) PAFD103 protein (Fragment... 32 0.10
TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partia... 32 0.10
TC203509 weakly similar to UP|Q8GRJ3 (Q8GRJ3) Glycosyl hydrolase... 32 0.10
TC226603 similar to UP|Q93YR3 (Q93YR3) HSP associated protein li... 32 0.13
TC204211 similar to GB|AAP12844.1|30017221|BT006195 At1g18650 {A... 31 0.17
TC207079 31 0.17
TC204212 weakly similar to UP|Q9XZZ8 (Q9XZZ8) Secretory protein ... 31 0.23
TC209498 similar to UP|Q8L8Z3 (Q8L8Z3) Structural protein-like p... 30 0.29
TC204210 weakly similar to GB|AAP12844.1|30017221|BT006195 At1g1... 30 0.38
TC215256 similar to UP|O80837 (O80837) Remorin, partial (36%) 30 0.38
>TC205988 UP|PM1_SOYBN (Q01417) 18 kDa seed maturation protein, complete
Length = 846
Score = 210 bits (535), Expect = 2e-55
Identities = 112/173 (64%), Positives = 123/173 (70%), Gaps = 33/173 (19%)
Frame = +1
Query: 1 MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVS 60
MQG KKA E++KETA NIGASAK+G EKTKATVQEKAE++TA DPVQKE+ATQKKEAK++
Sbjct: 73 MQGGKKAGESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMN 252
Query: 61 QAELDKLAAREHNAATKQSAAAAAHMG-----TGTGTGTAAYSTTGAHGQPMGAHQTSAL 115
QAELDK AAR+HN A KQSA A HMG TGTGTGTA YSTTG +GQPMGAHQTSA+
Sbjct: 253 QAELDKQAARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAM 432
Query: 116 PGHGTG----------------------------HNTRVGGNPNATGYGTGGT 140
PGHGTG HNTR GG PN GYGTGGT
Sbjct: 433 PGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGTGGT 591
>TC207049 UP|Q01527 (Q01527) Maturation protein (Soybean seed maturation
polypeptides), complete
Length = 759
Score = 179 bits (454), Expect = 4e-46
Identities = 101/170 (59%), Positives = 111/170 (64%), Gaps = 28/170 (16%)
Frame = +1
Query: 1 MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVS 60
MQG KKA E++KETAANIGASAK+G EKTKATVQEKAE++TA DP+QKE+ATQKKEAK+S
Sbjct: 46 MQGGKKAGESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKMS 225
Query: 61 QAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGT 120
QAELDK AAR+HN A KQ AA A HM GQPMG HQTSA+PGHGT
Sbjct: 226 QAELDKQAARQHNTAAKQ-AATAGHM-----------------GQPMGTHQTSAMPGHGT 351
Query: 121 G----------------------------HNTRVGGNPNATGYGTGGTYN 142
G HNTR GGNPN GYGTGGTYN
Sbjct: 352 GQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGTGGTYN 501
>AW733897 similar to SP|Q01417|PM1_ 18 kDa seed maturation protein. [Soybean]
{Glycine max}, partial (63%)
Length = 331
Score = 69.3 bits (168), Expect = 6e-13
Identities = 44/88 (50%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Frame = +2
Query: 64 LDKLAAREHNAATKQSAAAAAHMG-----TGTGTGTAAYSTTGAHGQPMGAHQTSALPGH 118
LDK AAR+HN KQSA A HMG TG T T Y TTG +G MGA QTS + H
Sbjct: 2 LDKHAARQHNTEAKQSATTAGHMGHGHHTTGIRTVTTTYYTTGEYGHRMGADQTSEMQ*H 181
Query: 119 G----TGHNTR--VGGNPNATGYGTGGT 140
G TGH T VG + T G GGT
Sbjct: 182 GTDLPTGHVTERVVGSHAIRTNIGHGGT 265
>TC226209 UP|Q9XET0 (Q9XET0) Seed maturation protein PM30, complete
Length = 727
Score = 38.1 bits (87), Expect = 0.001
Identities = 25/104 (24%), Positives = 40/104 (38%)
Frame = +3
Query: 6 KATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELD 65
+ E +T NIG A++ KEKT+ Q EK K+ +A + + +
Sbjct: 138 RTEEKTNQTMGNIGEKAQAAKEKTQEMAQAAKEKTQQTAQAAKDKTCDTSQAAKEKTQQN 317
Query: 66 KLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGA 109
AA++ + QS +A G G + G GA
Sbjct: 318 TGAAQQKTSEMGQSTKESAQSGKDNTQGFLQQTGEKVKGAAQGA 449
Score = 26.2 bits (56), Expect = 5.6
Identities = 13/39 (33%), Positives = 20/39 (50%)
Frame = +3
Query: 2 QGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKV 40
Q A + E + SA+SGK+ T+ +Q+ EKV
Sbjct: 312 QNTGAAQQKTSEMGQSTKESAQSGKDNTQGFLQQTGEKV 428
>TC203463 weakly similar to UP|Q8IMS9 (Q8IMS9) CG31439-PA, partial (13%)
Length = 875
Score = 35.0 bits (79), Expect = 0.012
Identities = 27/73 (36%), Positives = 29/73 (38%), Gaps = 19/73 (26%)
Frame = +3
Query: 89 GTGTGTAAYSTTGAHGQP----MGAHQTSALPGHGTGHNTRVG---------GNPNATGY 135
GTGT +TT G P TS PG GTG T G GNPN G
Sbjct: 534 GTGTTATPTTTTPTTGTPPTTLTPTTPTSTTPGIGTGTGTTTGTGTGTGTTTGNPNVFGM 713
Query: 136 ------GTGGTYN 142
GTGG +N
Sbjct: 714 SPTSSTGTGGGFN 752
Score = 25.4 bits (54), Expect = 9.5
Identities = 17/37 (45%), Positives = 20/37 (53%)
Frame = +3
Query: 87 GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHN 123
GT TGTGT +TTG + G TS+ G G G N
Sbjct: 648 GTTTGTGTGTGTTTG-NPNVFGMSPTSS-TGTGGGFN 752
>TC216904 UP|P93166 (P93166) SCOF-1, complete
Length = 1114
Score = 33.1 bits (74), Expect = 0.045
Identities = 22/79 (27%), Positives = 34/79 (42%), Gaps = 5/79 (6%)
Frame = +2
Query: 68 AAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAH-----GQPMGAHQTSALPGHGTGH 122
AA + +T S+AAA T + +G A+ + H GQ +G H+ G+G G+
Sbjct: 542 AAEDQPPSTTTSSAAA----TSSASGGKAHECSICHKSFPTGQALGGHKRCHYEGNGNGN 709
Query: 123 NTRVGGNPNATGYGTGGTY 141
N G G T+
Sbjct: 710 NNNSNSVVTVASEGVGSTH 766
>BQ253503 weakly similar to GP|22831720|gb CG6775-PA {Drosophila
melanogaster}, partial (0%)
Length = 361
Score = 32.7 bits (73), Expect = 0.059
Identities = 30/112 (26%), Positives = 41/112 (35%), Gaps = 3/112 (2%)
Frame = +1
Query: 32 TVQEKAEKVTAGD--PVQKEMATQKKEAKVSQAELDKLAAREHNAATKQSAAAAAHMGTG 89
+++ KA + GD PV E + + A AE E AA QSA AA +
Sbjct: 4 SLEVKAFYSSMGDSEPVVTEASAAEAYASAGYAETGSNPTPEAGAAVDQSAGEAAQASST 183
Query: 90 TGTGTAAYSTTGAH-GQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTGGT 140
G G + T A+ G P Q + G + N G G T
Sbjct: 184 YGYGYSNVGDTNAYAGDPNSVLQQAHFSATGDSKPAGAAADANEASAGVGTT 339
>TC214570 homologue to PIR|T05766|T05766 peptidylprolyl isomerase M4E13.20 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(13%)
Length = 944
Score = 32.7 bits (73), Expect = 0.059
Identities = 19/85 (22%), Positives = 35/85 (40%)
Frame = +2
Query: 5 KKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAEL 64
K + + E + K K+K K + + + +K+ K + + S EL
Sbjct: 434 KVKVKKVDEETVEVEVEKKEKKKKKKKNKENSEAASSDEEKTEKKKKKHKDKVEDSSPEL 613
Query: 65 DKLAAREHNAATKQSAAAAAHMGTG 89
DK ++ K++AAA A + G
Sbjct: 614 DKSEKKKKKKKDKEAAAATAEISNG 688
>TC209064 similar to UP|P93166 (P93166) SCOF-1, partial (93%)
Length = 945
Score = 32.7 bits (73), Expect = 0.059
Identities = 23/79 (29%), Positives = 34/79 (42%), Gaps = 3/79 (3%)
Frame = +3
Query: 66 KLAAR--EHNAATKQSAAAAAHMGTGTGTGTAAYSTTG-AHGQPMGAHQTSALPGHGTGH 122
KLAA E T SAA++A+ +G T + GQ +G H+ G+ G+
Sbjct: 396 KLAASGGEDQPTTTSSAASSANTASGGRTHECSICHKSFPTGQALGGHKRCHYEGNSNGN 575
Query: 123 NTRVGGNPNATGYGTGGTY 141
N + A G G T+
Sbjct: 576 NNNSNSSVTAASEGVGSTH 632
>CO985160
Length = 777
Score = 32.0 bits (71), Expect = 0.10
Identities = 29/102 (28%), Positives = 34/102 (32%)
Frame = -1
Query: 15 AANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAAREHNA 74
A + +A S T AT A A AT A + AA A
Sbjct: 678 ATSHATTATSSAPTTAATTSSAAAAAAATSSAPTTAATTSSAAAAAATTSSAAAA----A 511
Query: 75 ATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALP 116
AT SAA AA G AA + A+ A TS P
Sbjct: 510 ATTSSAATAAATGPAAAACAAATAAASANPATAAATSTSTTP 385
Score = 27.7 bits (60), Expect = 1.9
Identities = 29/122 (23%), Positives = 42/122 (33%), Gaps = 2/122 (1%)
Frame = -1
Query: 14 TAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAAREHN 73
T+A+ +A S T A A T+ P + A + + AA +
Sbjct: 735 TSADAKPTAASSAVATTAAATSHATTATSSAPTTAATTSSAAAAAAATSSAPTTAATTSS 556
Query: 74 AATKQS--AAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPN 131
AA + ++AAA T + TAA TG A +A T T P
Sbjct: 555 AAAAAATTSSAAAAAATTSSAATAA--ATGPAAAACAAATAAASANPATAAATSTSTTPT 382
Query: 132 AT 133
T
Sbjct: 381 TT 376
Score = 25.8 bits (55), Expect = 7.3
Identities = 31/107 (28%), Positives = 37/107 (33%), Gaps = 8/107 (7%)
Frame = -1
Query: 4 AKKATETMKETAANIG-----ASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAK 58
A AT + TAA A+A S T AT A AT A
Sbjct: 666 ATTATSSAPTTAATTSSAAAAAAATSSAPTTAATTSSAAAAAATTSSAAAAAATTSSAAT 487
Query: 59 VSQ---AELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGA 102
+ A AA +A +AAA + T T T TAA S A
Sbjct: 486 AAATGPAAAACAAATAAASANPATAAATSTSTTPTTTATAAASAVTA 346
>TC227495 similar to UP|P93273 (P93273) PAFD103 protein (Fragment), partial
(58%)
Length = 832
Score = 32.0 bits (71), Expect = 0.10
Identities = 26/82 (31%), Positives = 42/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 6 KATETMKETAANI-GASAKSGKEKTKATVQEKAEKVTAGDPVQ--KEMATQKKEAKVSQA 62
K+++ KE+ + G A +G ++ EKAE +A D + K++A+ KK K S
Sbjct: 314 KSSKEQKESQDQLDGLDAGTGNATSETAETEKAEDASAIDVKERLKKVASMKK--KKSSK 487
Query: 63 ELDKLAAREHNAATKQSAAAAA 84
E+D A N A ++A AA
Sbjct: 488 EMDAAARAAANEAAARNARLAA 553
Score = 28.1 bits (61), Expect = 1.5
Identities = 24/97 (24%), Positives = 43/97 (43%), Gaps = 2/97 (2%)
Frame = +2
Query: 5 KKATETMKETAANIGASAK--SGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQA 62
KK E ++ A +G + K +G+E ++K E DP + A +KKE ++
Sbjct: 128 KKGLEELEAVLAELGYTRKEPTGQEDDSNGAEKKEE-----DP---KGAVEKKENATGES 283
Query: 63 ELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYST 99
+ K ++ ++ +Q + G GTG A T
Sbjct: 284 KNAKKKKKKDKSSKEQKESQDQLDGLDAGTGNATSET 394
>TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partial (4%)
Length = 540
Score = 32.0 bits (71), Expect = 0.10
Identities = 31/91 (34%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +1
Query: 46 VQKEMATQKKEAK---VSQAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGA 102
V+ AT +AK S A AA H A T SAAAAA + T A S T A
Sbjct: 1 VESAAATAPADAKPTATSSAVATTAAATSHAATTTSSAAAAA-AASSAATAAATSSATTA 177
Query: 103 HGQPMGAHQTSALPGHGTGHNTRVGGNPNAT 133
P A SA P +T AT
Sbjct: 178 ATAPAAA--ASATPATAAAASTSTTPTTTAT 264
Score = 30.0 bits (66), Expect = 0.38
Identities = 34/125 (27%), Positives = 46/125 (36%)
Frame = +1
Query: 16 ANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAAREHNAA 75
A+ +A S T A A T+ ++ A S A A +A
Sbjct: 28 ADAKPTATSSAVATTAAATSHAATTTSSAAAAAAASSAATAAATSSATTAATAPAAAASA 207
Query: 76 TKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGY 135
T +AAAA+ T T T TAA S A T+A G G + + + P A
Sbjct: 208 TPATAAAASTSTTPTTTATAAASAVAA------TAATAATDGWGR-NGSSLWSRPWAVTA 366
Query: 136 GTGGT 140
G GT
Sbjct: 367 GFSGT 381
>TC203509 weakly similar to UP|Q8GRJ3 (Q8GRJ3) Glycosyl hydrolase family
17-like protein, partial (19%)
Length = 653
Score = 32.0 bits (71), Expect = 0.10
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Frame = +2
Query: 87 GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGY------GTGGT 140
G GTGTGT + TG G GTG T GNPN G GTGG
Sbjct: 74 GIGTGTGTTTGTGTGT--------------GTGTGTTT---GNPNVFGMSPTSSTGTGGG 202
Query: 141 YN 142
+N
Sbjct: 203 FN 208
>TC226603 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
(36%)
Length = 809
Score = 31.6 bits (70), Expect = 0.13
Identities = 24/89 (26%), Positives = 37/89 (40%), Gaps = 1/89 (1%)
Frame = +3
Query: 47 QKEMATQKKEAKVSQAELDKLAAREHNAATKQSAAAAAHMGTG-TGTGTAAYSTTGAHGQ 105
+KE Q++ A+ +QA +K +E +++++ G G G GA G
Sbjct: 78 KKERERQRRRAE-AQAAYEKAKKQEQSSSSRNPGGMPGGFPGGFPGAGGMPGGFPGAGGM 254
Query: 106 PMGAHQTSALPGHGTGHNTRVGGNPNATG 134
P G +PG G GG P A G
Sbjct: 255 PGGFPGAGGMPGGFPGAGGMPGGFPGAGG 341
Score = 30.4 bits (67), Expect = 0.29
Identities = 26/93 (27%), Positives = 36/93 (37%)
Frame = +3
Query: 46 VQKEMATQKKEAKVSQAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQ 105
+ KE +KKE + + + AA E +QS+++ G G GA G
Sbjct: 54 LHKEREDKKKERERQRRRAEAQAAYEKAKKQEQSSSSR---NPGGMPGGFPGGFPGAGGM 224
Query: 106 PMGAHQTSALPGHGTGHNTRVGGNPNATGYGTG 138
P G +PG G GG P A G G
Sbjct: 225 PGGFPGAGGMPGGFPGAGGMPGGFPGAGGMPGG 323
>TC204211 similar to GB|AAP12844.1|30017221|BT006195 At1g18650 {Arabidopsis
thaliana;} , partial (38%)
Length = 949
Score = 31.2 bits (69), Expect = 0.17
Identities = 17/38 (44%), Positives = 18/38 (46%), Gaps = 4/38 (10%)
Frame = +3
Query: 75 ATKQSAAAAAHMGTGTGTGTAAYSTT----GAHGQPMG 108
+T GTGTGTGT YSTT G G MG
Sbjct: 483 STSTGTGTGTGTGTGTGTGTTPYSTTPGVLGGIGSGMG 596
Score = 30.0 bits (66), Expect = 0.38
Identities = 20/53 (37%), Positives = 23/53 (42%)
Frame = +3
Query: 88 TGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTGGT 140
+ GTGT +TT MG T+ P TG T G TG GTG T
Sbjct: 408 SAAGTGTTPVTTT----PTMGTTPTTGTPSTSTGTGT---GTGTGTGTGTGTT 545
Score = 27.3 bits (59), Expect = 2.5
Identities = 16/62 (25%), Positives = 21/62 (33%)
Frame = +3
Query: 40 VTAGDPVQKEMATQKKEAKVSQAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYST 99
VTA DP + + T + + GTGTGTGT +
Sbjct: 354 VTASDPSSGGTCVYPSSVSAAGTGTTPVTTTPTMGTTPTTGTPSTSTGTGTGTGTGTGTG 533
Query: 100 TG 101
TG
Sbjct: 534 TG 539
>TC207079
Length = 1972
Score = 31.2 bits (69), Expect = 0.17
Identities = 24/92 (26%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
Frame = +2
Query: 45 PVQKEMATQKKEAKVSQAELDKLAAREHNAAT---KQSAAAAAHMGTGTGTGTAAYSTTG 101
PV + + A + Q +D + T +A T T G Y +
Sbjct: 692 PVAPLQSVSNRPANIYQRYVDDMPRYRSGTGTYLPNPKVSARDRHSTNTRRGNYNYDRSD 871
Query: 102 AHGQPMGAHQT-SALPGHGTGHNTRVGGNPNA 132
HG G T S L G G GHN PN+
Sbjct: 872 HHGDREGNWNTNSKLRGTGRGHNRNQNEKPNS 967
>TC204212 weakly similar to UP|Q9XZZ8 (Q9XZZ8) Secretory protein (LS110p)
precursor, partial (10%)
Length = 457
Score = 30.8 bits (68), Expect = 0.23
Identities = 17/37 (45%), Positives = 20/37 (53%), Gaps = 4/37 (10%)
Frame = +2
Query: 76 TKQSAAAAAHMGTGTGTGTAAYSTT----GAHGQPMG 108
T + + + GTGTGTGT YSTT G G MG
Sbjct: 134 TTGTPSTSTGTGTGTGTGTTPYSTTPGVLGGIGSGMG 244
Score = 26.2 bits (56), Expect = 5.6
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 88 TGTGTGTAAYSTTGAHGQPMGAHQTSALP--GHGTGHNTRVGGNPNATGYGTGG 139
+ GTGT +TT MG T+ P GTG T G P +T G G
Sbjct: 74 SAAGTGTTPVTTT----PTMGTTPTTGTPSTSTGTGTGTGTGTTPYSTTPGVLG 223
>TC209498 similar to UP|Q8L8Z3 (Q8L8Z3) Structural protein-like protein,
partial (51%)
Length = 795
Score = 30.4 bits (67), Expect = 0.29
Identities = 22/77 (28%), Positives = 32/77 (40%), Gaps = 12/77 (15%)
Frame = +2
Query: 74 AATKQSAAAAAH-------MGTGTGTGTAAYSTTGAHGQPMG-----AHQTSALPGHGTG 121
A T A + H G G+G GT +G+ P G + + G G+G
Sbjct: 239 AGTPTGATGSGHGANWDYSWGWGSGPGTGYGYGSGSGRSPTGFARGYGYGFGSGTGSGSG 418
Query: 122 HNTRVGGNPNATGYGTG 138
+ GG +A GYG+G
Sbjct: 419 YGYGSGGGAHAGGYGSG 469
Score = 27.3 bits (59), Expect = 2.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 87 GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPN 131
GTG+G+G S GAH G+ S G G + GG+ N
Sbjct: 398 GTGSGSGYGYGSGGGAHAGGYGSGSGSGNSGGGGYDDKNGGGDDN 532
>TC204210 weakly similar to GB|AAP12844.1|30017221|BT006195 At1g18650
{Arabidopsis thaliana;} , partial (60%)
Length = 1127
Score = 30.0 bits (66), Expect = 0.38
Identities = 18/52 (34%), Positives = 21/52 (39%)
Frame = +1
Query: 88 TGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTGG 139
+ GTGT +TT G S G GTG T G P +T G G
Sbjct: 475 SAAGTGTTPVTTTPTMGTTPTTGTPSTSTGTGTGTGTTTGTTPYSTTPGVLG 630
Score = 28.1 bits (61), Expect = 1.5
Identities = 16/34 (47%), Positives = 17/34 (49%), Gaps = 4/34 (11%)
Frame = +1
Query: 79 SAAAAAHMGTGTGTGTAAYSTT----GAHGQPMG 108
S + GTGT TGT YSTT G G MG
Sbjct: 550 STSTGTGTGTGTTTGTTPYSTTPGVLGGIGSGMG 651
>TC215256 similar to UP|O80837 (O80837) Remorin, partial (36%)
Length = 525
Score = 30.0 bits (66), Expect = 0.38
Identities = 21/64 (32%), Positives = 33/64 (50%)
Frame = -2
Query: 74 AATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNAT 133
+ T ++ ++A GTG GT TA S+ G+ T A G GTG +T V + A+
Sbjct: 278 STTTRALVSSAAAGTGGGTTTAFCSSGRTPQXSGGSGSTGARAGTGTG-STLVWSSAIAS 102
Query: 134 GYGT 137
+G+
Sbjct: 101 EFGS 90
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.301 0.116 0.312
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,980,850
Number of Sequences: 63676
Number of extensions: 44488
Number of successful extensions: 346
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of query: 142
length of database: 12,639,632
effective HSP length: 88
effective length of query: 54
effective length of database: 7,036,144
effective search space: 379951776
effective search space used: 379951776
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0221.11