TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0221.10
         (296 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC204631 weakly similar to UP|NOA1_MOUSE (Q9JKN6) RNA-binding pr...   472  e-133
TC204632 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing prot...   437  e-123
TC204634 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing prot...   399  e-112
TC204633 similar to GB|AAO63324.1|28950801|BT005260 At5g06770 {A...   305  2e-83
TC204636 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing prot...   166  6e-46
TC204635 similar to GB|AAO63324.1|28950801|BT005260 At5g06770 {A...   162  1e-40
TC204637 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing prot...   145  2e-35
BM521616                                                               93  1e-19
CA784839                                                               76  2e-14
TC204720 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17...    51  5e-07
TC204721 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17...    47  1e-05
CO983887                                                               45  3e-05
TC229606 similar to UP|Q941Q3 (Q941Q3) Floral homeotic protein H...    42  3e-04
TC227946 similar to UP|Q6K6Z4 (Q6K6Z4) KH domain-containing prot...    40  0.001
BE805631                                                               40  0.002
AW279255                                                               39  0.003
TC208136 weakly similar to UP|Q84ZX0 (Q84ZX0) HEN4, partial (13%)      38  0.006
BG510472                                                               36  0.024
TC203702 weakly similar to GB|AAP68215.1|31711718|BT008776 At1g5...    36  0.024
TC228692 similar to UP|Q8S9A6 (Q8S9A6) Glucosyltransferase-3, pa...    28  0.050

>TC204631 weakly similar to UP|NOA1_MOUSE (Q9JKN6) RNA-binding protein Nova-1
           (Neuro-oncological ventral antigen 1) (Ventral
           neuron-specific protein 1) (Fragment), partial (6%)
          Length = 1150

 Score =  472 bits (1214), Expect = e-133
 Identities = 237/294 (80%), Positives = 251/294 (84%), Gaps = 4/294 (1%)
 Frame = +2

Query: 1   MDFRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60
           MD RKRGRP+   N NG +KK+KQELESLSSGVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 128 MDVRKRGRPD--VNLNGAVKKTKQELESLSSGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 301

Query: 61  VPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTP-AVKTRICNKFNTAEGCKFGDK 119
           VPGGYN VAHMMNL P+A  PPR VAAPPP +PNGS P AVKTRICNKFNTAEGCKFGDK
Sbjct: 302 VPGGYNVVAHMMNLKPAAP-PPRTVAAPPP-IPNGSAPSAVKTRICNKFNTAEGCKFGDK 475

Query: 120 CHFAHGEWELGKHIAPSFDDH---RPIGHAPAGRIGGRMEPPPGPATGFGANATAKISVE 176
           CHFAHGEWELGK IAPS DDH   RP+G    GR+ GR+EPPP  A  FGA +TAKISVE
Sbjct: 476 CHFAHGEWELGKPIAPSIDDHHHHRPLGPPAGGRMAGRIEPPPAMAGSFGAISTAKISVE 655

Query: 177 ASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFDQIKEASNMVKDLL 236
           ASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEG+F+QIKEASNMVKDLL
Sbjct: 656 ASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIKEASNMVKDLL 835

Query: 237 LTLQMSAPPKSNQGGAGGPGGHGHHGSNNFKTKLCENFAKGTCTFGERCHFAHG 290
           LT+ MSAPPKS  G  G P   G    +NFKTKLCENFAKG+CTFGERCHFAHG
Sbjct: 836 LTVSMSAPPKSTPGVPGAPAPPG----SNFKTKLCENFAKGSCTFGERCHFAHG 985



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +2

Query: 236 LLTLQMSAPPKSNQGGAGGPGGHGHHGSNNFKTKLCENF--AKGTCTFGERCHFAHGPAE 293
           ++ L+ +APP      A  P        +  KT++C  F  A+G C FG++CHFAHG  E
Sbjct: 332 MMNLKPAAPPPRTV--AAPPPIPNGSAPSAVKTRICNKFNTAEG-CKFGDKCHFAHGEWE 502

Query: 294 LRK 296
           L K
Sbjct: 503 LGK 511


>TC204632 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing protein-like,
           partial (58%)
          Length = 1220

 Score =  437 bits (1123), Expect = e-123
 Identities = 211/253 (83%), Positives = 220/253 (86%), Gaps = 1/253 (0%)
 Frame = +2

Query: 45  STAGCPFGESCHFLHYVPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTP-AVKTR 103
           STAGCPFGE CHFLHYVPGGYNAVAHMMNL P+A  PP    A  P VPNGS P AVKTR
Sbjct: 275 STAGCPFGEGCHFLHYVPGGYNAVAHMMNLTPAAPPPPSRNVAALPHVPNGSAPSAVKTR 454

Query: 104 ICNKFNTAEGCKFGDKCHFAHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPPPGPAT 163
           ICNKFNTAEGCKFGDKCHFAHGEWELGKHIAPSFDDHR +G   AGR+ GRMEPPPGPA 
Sbjct: 455 ICNKFNTAEGCKFGDKCHFAHGEWELGKHIAPSFDDHRAMGPPGAGRLAGRMEPPPGPAA 634

Query: 164 GFGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFD 223
            FGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSF+
Sbjct: 635 SFGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFE 814

Query: 224 QIKEASNMVKDLLLTLQMSAPPKSNQGGAGGPGGHGHHGSNNFKTKLCENFAKGTCTFGE 283
           QIKEASNMVKDLLLTLQMSAPPK+  G  G P  HG    +NFKTKLCENF KG+CTFG+
Sbjct: 815 QIKEASNMVKDLLLTLQMSAPPKTTPGVPGAPASHG----SNFKTKLCENFTKGSCTFGD 982

Query: 284 RCHFAHGPAELRK 296
           RCHFAHG +ELRK
Sbjct: 983 RCHFAHGASELRK 1021



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 28/76 (36%), Positives = 35/76 (45%), Gaps = 9/76 (11%)
 Frame = +2

Query: 36  KSKPCTKFFSTAGCPFGESCHFLHYVPGGYNAVAHMMNLAPS-----AQAPP--RNVAA- 87
           K++ C KF +  GC FG+ CHF H   G +    H   +APS     A  PP    +A  
Sbjct: 446 KTRICNKFNTAEGCKFGDKCHFAH---GEWELGKH---IAPSFDDHRAMGPPGAGRLAGR 607

Query: 88  -PPPPVPNGSTPAVKT 102
             PPP P  S  A  T
Sbjct: 608 MEPPPGPAASFGANAT 655



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 9   PEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKF 43
           P+PGF+ NGG K+SKQ L  L + +   +  CT F
Sbjct: 228 PKPGFSLNGGFKRSKQAL--LVAHLVRAATSCTMF 326



 Score = 30.0 bits (66), Expect = 1.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 30  SSGVGSKSKPCTKFFSTAGCPFGESCHFLH 59
           S G   K+K C  F +   C FG+ CHF H
Sbjct: 914 SHGSNFKTKLCENF-TKGSCTFGDRCHFAH 1000


>TC204634 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing protein-like,
           partial (67%)
          Length = 1248

 Score =  399 bits (1025), Expect = e-112
 Identities = 194/299 (64%), Positives = 231/299 (76%), Gaps = 6/299 (2%)
 Frame = +1

Query: 4   RKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKRGRPE  FN NGG KKS+ E +S  +G+GSKSKPCTKFFST+GCPFGE CHFLHYVPG
Sbjct: 205 RKRGRPEAAFNFNGGAKKSRPETDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 384

Query: 64  GYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGST-PAVKTRICNKFNTAEGCKFGDKCHF 122
           G+ AV+ ++N+  +   P       PP  P+GS+ P VKTR+CNKFNTAEGCKFGDKCHF
Sbjct: 385 GFKAVSQLINVGSNPVTPQVGRNPVPPSFPDGSSPPVVKTRLCNKFNTAEGCKFGDKCHF 564

Query: 123 AHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPP---PGPATGFGANATAKISVEASL 179
           AHGEWELG+  APS++D R +G  P+ R+GGR+EPP    G A  FGA+ATAKIS+ ASL
Sbjct: 565 AHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVEPPHPAHGAAASFGASATAKISINASL 744

Query: 180 AGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFDQIKEASNMVKDLLLTL 239
           AGA+IGK GVNSKQICR TGAKLSIR+H++DPNLRNIELEGSFDQIK+AS MV +++L +
Sbjct: 745 AGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQASAMVHEVILNV 924

Query: 240 QMSA--PPKSNQGGAGGPGGHGHHGSNNFKTKLCENFAKGTCTFGERCHFAHGPAELRK 296
             ++  P KS       P       ++NFKTKLCENFAKG+CTFGERCHFAHG  ELRK
Sbjct: 925 SSASGPPMKSFTSQTSAP-------TSNFKTKLCENFAKGSCTFGERCHFAHGTDELRK 1080


>TC204633 similar to GB|AAO63324.1|28950801|BT005260 At5g06770 {Arabidopsis
           thaliana;} , partial (38%)
          Length = 741

 Score =  305 bits (780), Expect = 2e-83
 Identities = 145/172 (84%), Positives = 151/172 (87%), Gaps = 1/172 (0%)
 Frame = +3

Query: 1   MDFRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60
           MD RKRGRPEPGF+ NGG KKSKQE+ESLS+GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 228 MDTRKRGRPEPGFSLNGGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 407

Query: 61  VPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTP-AVKTRICNKFNTAEGCKFGDK 119
           VPGGYNAVAHMMNL P+A    RNVAA P  VPNGS P AVKTRICNKFNTAEGCKFGDK
Sbjct: 408 VPGGYNAVAHMMNLTPAAPPASRNVAALPH-VPNGSAPSAVKTRICNKFNTAEGCKFGDK 584

Query: 120 CHFAHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPPPGPATGFGANATA 171
           CHFAHGEWELGKHIAPSFDDHR +G   AGR+ GRMEPPPGPA  FGANATA
Sbjct: 585 CHFAHGEWELGKHIAPSFDDHRAMGPPGAGRLAGRMEPPPGPAASFGANATA 740



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
 Frame = +3

Query: 236 LLTLQMSAPPKSNQGGAGGPGGHGHHGS--NNFKTKLCENF--AKGTCTFGERCHFAHGP 291
           ++ L  +APP S    A     H  +GS  +  KT++C  F  A+G C FG++CHFAHG 
Sbjct: 438 MMNLTPAAPPASRNVAALP---HVPNGSAPSAVKTRICNKFNTAEG-CKFGDKCHFAHGE 605

Query: 292 AELRK 296
            EL K
Sbjct: 606 WELGK 620



 Score = 28.1 bits (61), Expect = 4.9
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 267 KTKLCENF-AKGTCTFGERCHFAH 289
           K+K C  F +   C FGE CHF H
Sbjct: 333 KSKPCTKFFSTAGCPFGEGCHFLH 404


>TC204636 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing protein-like,
           partial (21%)
          Length = 654

 Score =  166 bits (421), Expect(2) = 6e-46
 Identities = 75/124 (60%), Positives = 93/124 (74%), Gaps = 1/124 (0%)
 Frame = +1

Query: 46  TAGCPFGESCHFLHYVPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTP-AVKTRI 104
           T+GCPFGE CHFLHYVPGG+ AV+ ++N+  +   P       PP  P+GS+P  VKTR+
Sbjct: 286 TSGCPFGEGCHFLHYVPGGFKAVSQLINVGSNPVTPQVGRNPVPPSFPDGSSPPVVKTRL 465

Query: 105 CNKFNTAEGCKFGDKCHFAHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPPPGPATG 164
           CNKFNTAEGCKFGDKCHFAHGEWELG+  APS++D R +G  P+ R+GGR+E PP PA G
Sbjct: 466 CNKFNTAEGCKFGDKCHFAHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVE-PPHPAHG 642

Query: 165 FGAN 168
             A+
Sbjct: 643 AAAS 654



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = +1

Query: 267 KTKLCENF--AKGTCTFGERCHFAHGPAEL 294
           KT+LC  F  A+G C FG++CHFAHG  EL
Sbjct: 454 KTRLCNKFNTAEG-CKFGDKCHFAHGEWEL 540



 Score = 35.4 bits (80), Expect = 0.031
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 36  KSKPCTKFFSTAGCPFGESCHFLH 59
           K++ C KF +  GC FG+ CHF H
Sbjct: 454 KTRLCNKFNTAEGCKFGDKCHFAH 525



 Score = 35.4 bits (80), Expect(2) = 6e-46
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +2

Query: 4   RKRGRPEPGFNSNGGIKKSK 23
           RKRGRPE  FN NGG KKS+
Sbjct: 221 RKRGRPEAAFNFNGGAKKSR 280


>TC204635 similar to GB|AAO63324.1|28950801|BT005260 At5g06770 {Arabidopsis
           thaliana;} , partial (30%)
          Length = 464

 Score =  162 bits (411), Expect = 1e-40
 Identities = 76/88 (86%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
 Frame = +3

Query: 1   MDFRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60
           MD RKRGRPEPGF+ NGG KKSKQE+ESLS+GVGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 198 MDIRKRGRPEPGFSLNGGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 377

Query: 61  VPGGYNAVAHMMNLAPSAQAPP-RNVAA 87
           VPGGYNAVAHMMNL P+A  PP RNVAA
Sbjct: 378 VPGGYNAVAHMMNLTPAAPLPPTRNVAA 461



 Score = 34.7 bits (78), Expect = 0.053
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 101 KTRICNKFNTAEGCKFGDKCHFAH 124
           K++ C KF +  GC FG+ CHF H
Sbjct: 303 KSKPCTKFFSTAGCPFGEGCHFLH 374



 Score = 28.1 bits (61), Expect = 4.9
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 267 KTKLCENF-AKGTCTFGERCHFAH 289
           K+K C  F +   C FGE CHF H
Sbjct: 303 KSKPCTKFFSTAGCPFGEGCHFLH 374


>TC204637 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing protein-like,
           partial (21%)
          Length = 503

 Score =  145 bits (366), Expect = 2e-35
 Identities = 69/81 (85%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = +3

Query: 45  STAGCPFGESCHFLHYVPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGST-PAVKTR 103
           STAGCPFGE CHFLHYVPGGYNAVAHMMNL P+A    RNVAA  PPVPNGS  PAVKTR
Sbjct: 264 STAGCPFGEGCHFLHYVPGGYNAVAHMMNLTPAAPPASRNVAA-LPPVPNGSAPPAVKTR 440

Query: 104 ICNKFNTAEGCKFGDKCHFAH 124
           ICNKFNTAEGCK GDKCHFAH
Sbjct: 441 ICNKFNTAEGCKXGDKCHFAH 503



 Score = 47.8 bits (112), Expect(2) = 8e-10
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 1   MDFRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKF 43
           MD RKRGRPEPGF+ NGG KKSKQ L  L + +   +  CT F
Sbjct: 193 MDTRKRGRPEPGFSLNGGFKKSKQAL--LVAHLVRAATSCTMF 315



 Score = 35.0 bits (79), Expect = 0.040
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 236 LLTLQMSAPPKSNQGGAGGPGGHGHHGSNNFKTKLCENF--AKGTCTFGERCHFAH 289
           ++ L  +APP S    A  P  +G       KT++C  F  A+G C  G++CHFAH
Sbjct: 342 MMNLTPAAPPASRNVAALPPVPNGS-APPAVKTRICNKFNTAEG-CKXGDKCHFAH 503



 Score = 32.7 bits (73), Expect(2) = 8e-10
 Identities = 11/24 (45%), Positives = 15/24 (61%)
 Frame = +3

Query: 36  KSKPCTKFFSTAGCPFGESCHFLH 59
           K++ C KF +  GC  G+ CHF H
Sbjct: 432 KTRICNKFNTAEGCKXGDKCHFAH 503


>BM521616 
          Length = 428

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 41/55 (74%), Positives = 43/55 (77%)
 Frame = +3

Query: 45  STAGCPFGESCHFLHYVPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTPA 99
           STAGCPFGE CHFLHYVPGGYNAVAHMMNL P+A  PP    A  P VPNGS P+
Sbjct: 255 STAGCPFGEGCHFLHYVPGGYNAVAHMMNLTPAAPLPPTRNVAALPHVPNGSAPS 419



 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 26/43 (60%), Positives = 28/43 (64%)
 Frame = +1

Query: 1   MDFRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKF 43
           MD RKRGRPEPGF+ NGG KKSKQ L    S   + S  CT F
Sbjct: 184 MDIRKRGRPEPGFSLNGGFKKSKQALLVAHSVRAATS--CTMF 306


>CA784839 
          Length = 438

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +1

Query: 1   MDFRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFF 44
           MD RKRGR E GF+ NGG K+SKQE+ESLS+GVGSKSKPCTKFF
Sbjct: 115 MDIRKRGRHETGFSLNGGFKRSKQEMESLSTGVGSKSKPCTKFF 246


>TC204720 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17H15.1
           {Arabidopsis thaliana;} , partial (31%)
          Length = 1936

 Score = 51.2 bits (121), Expect = 5e-07
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
 Frame = +3

Query: 169 ATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSI-REHESDPN--LRNIELEGSFDQI 225
           A+ KI +     G IIGKGG   K +  Q+GAK+ + R+ ++DPN   R +EL GS D I
Sbjct: 120 ASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAI 299

Query: 226 KEASNMVKDLLLTLQMSAPPKSNQGGAG--GPGGHGHHGSNNFKTKLCEN 273
             A  ++ ++L         ++  GG+G       G  GS+ + +K+  N
Sbjct: 300 ATAEKLINEVL--------AEAETGGSGIIARRVAGQAGSDEYVSKIPNN 425



 Score = 35.4 bits (80), Expect = 0.031
 Identities = 19/60 (31%), Positives = 32/60 (52%), Gaps = 4/60 (6%)
 Frame = +3

Query: 181 GAIIGKGGVNSKQICRQTGAKLSIREHESDP----NLRNIELEGSFDQIKEASNMVKDLL 236
           G +IGKGG   K +   TGA++ +      P      R +++EG+ +QI+ A  MV  ++
Sbjct: 432 GLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIESAKQMVNQVI 611


>TC204721 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17H15.1
           {Arabidopsis thaliana;} , partial (30%)
          Length = 1762

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 34/104 (32%), Positives = 51/104 (48%), Gaps = 3/104 (2%)
 Frame = +2

Query: 173 ISVEASLAGAIIGKGGVNSKQICRQTGAKLSI-REHESDPN--LRNIELEGSFDQIKEAS 229
           I +     G IIGKGG   K +  Q+GAK+ I R+ ++DPN   R +EL G+ + I  A 
Sbjct: 2   IDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAISSAE 181

Query: 230 NMVKDLLLTLQMSAPPKSNQGGAGGPGGHGHHGSNNFKTKLCEN 273
            ++ ++L      A  +S   G       G  GS+ F  K+  N
Sbjct: 182 KLINEVL------AEAESGGSGIVTRRFTGQAGSDEFVMKIPNN 295



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +2

Query: 163 TGFGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDP----NLRNIEL 218
           TG   +    + +  +  G IIGKGG   K +   TGA++ +      P      R +++
Sbjct: 248 TGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKI 427

Query: 219 EGSFDQIKEASNMVKDLL 236
           +G+ +QI+ A  +V  ++
Sbjct: 428 DGTPEQIESAKQLVYQVI 481


>CO983887 
          Length = 795

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -2

Query: 101 KTRICNKFNTAEGCKFGDKCHFAHGEWEL 129
           KT++C KF T   C FGD CHFAHG+ EL
Sbjct: 638 KTKLCIKFETTGHCPFGDDCHFAHGQAEL 552



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 259 GHHGSNNFKTKLCENF-AKGTCTFGERCHFAHGPAELR 295
           G+  S  +KTKLC  F   G C FG+ CHFAHG AEL+
Sbjct: 662 GNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQ 549



 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 18/34 (52%), Positives = 21/34 (60%), Gaps = 5/34 (14%)
 Frame = -2

Query: 36  KSKPCTKFFSTAGCPFGESCHFLH-----YVPGG 64
           K+K C KF +T  CPFG+ CHF H      VPGG
Sbjct: 638 KTKLCIKFETTGHCPFGDDCHFAHGQAELQVPGG 537


>TC229606 similar to UP|Q941Q3 (Q941Q3) Floral homeotic protein HUA1, partial
           (50%)
          Length = 1569

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 34/122 (27%), Positives = 48/122 (38%), Gaps = 4/122 (3%)
 Frame = +3

Query: 7   GRPEPGFNSNGGIKKSKQELESLSSGVGSK--SKPCTKFFSTAGCPFGESCHFLH--YVP 62
           G+ E  +++N   K+ + E  S  +    +   K C  +  T  C FG+SC F H  +VP
Sbjct: 168 GQSEAWYSTNPLAKRPRYESASNMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPFWVP 347

Query: 63  GGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTPAVKTRICNKFNTAEGCKFGDKCHF 122
            G           P  +  P   +  PP  P           C  F   + CKFG KC F
Sbjct: 348 EGG---------IPDWKEVPIVTSETPPERPGEPD-------CPYFLKTQRCKFGSKCKF 479

Query: 123 AH 124
            H
Sbjct: 480 NH 485



 Score = 32.3 bits (72), Expect = 0.26
 Identities = 22/85 (25%), Positives = 27/85 (30%)
 Frame = +3

Query: 40   CTKFFSTAGCPFGESCHFLHYVPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTPA 99
            C  +  T  C FGE C + H +                  AP  +  A     P G    
Sbjct: 1041 CDFYMKTGECKFGERCKYHHPI---------------DRSAPSLSKQATVKLTPAGLPRR 1175

Query: 100  VKTRICNKFNTAEGCKFGDKCHFAH 124
                IC  +     CKFG  C F H
Sbjct: 1176 EGAVICPYYLKTGTCKFGATCKFDH 1250



 Score = 30.0 bits (66), Expect = 1.3
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 14/136 (10%)
 Frame = +3

Query: 3   FRKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSK--PCTKFFSTAGCPFGESCHFLH- 59
           F K  R + G        K   E   +SSG+  +    PC  +  T  C +G +C F H 
Sbjct: 435 FLKTQRCKFGSKCKFNHPKVSSENADVSSGLPERPSEPPCAFYMKTGKCRYGAACKFHHP 614

Query: 60  ------YVPGGYNAVAH-----MMNLAPSAQAPPRNVAAPPPPVPNGSTPAVKTRICNKF 108
                         VA      +M  A     P +++ +P      G    +    C  +
Sbjct: 615 KDIQIQLSNDSSQTVAQTQTNSIMGWATGDTPPIQSLISPSLQNSKGLPVRLGEVDCPFY 794

Query: 109 NTAEGCKFGDKCHFAH 124
                CK+G  C + H
Sbjct: 795 MKTGSCKYGVTCRYNH 842



 Score = 28.5 bits (62), Expect = 3.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 105 CNKFNTAEGCKFGDKCHFAHGEW 127
           C  +     CKFGD C F H  W
Sbjct: 273 CAHYMLTRTCKFGDSCKFDHPFW 341



 Score = 27.7 bits (60), Expect = 6.5
 Identities = 20/85 (23%), Positives = 25/85 (28%)
 Frame = +3

Query: 40  CTKFFSTAGCPFGESCHFLHYVPGGYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTPA 99
           C  F  T  C FG  C F H      N        A  +   P   + PP          
Sbjct: 426 CPYFLKTQRCKFGSKCKFNHPKVSSEN--------ADVSSGLPERPSEPP---------- 551

Query: 100 VKTRICNKFNTAEGCKFGDKCHFAH 124
                C  +     C++G  C F H
Sbjct: 552 -----CAFYMKTGKCRYGAACKFHH 611


>TC227946 similar to UP|Q6K6Z4 (Q6K6Z4) KH domain-containing protein
           NOVA-like, partial (58%)
          Length = 1228

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
 Frame = +2

Query: 157 PPPGPATGFGANAT-AKISVEASLAGAIIGKGGVNSKQICRQTGAKLSI-REHESDPNL- 213
           PP  P+       T  +  V  S AG++IGKGG        Q+GA++ + R HE  P   
Sbjct: 476 PPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTT 655

Query: 214 -RNIELEGSFDQIKEASNMVKDLLLTLQMS-----APPKSN------QGGAGGPGGHG 259
            R I + G+ ++I+ A  ++   LL+   S     A PK+        G  GG  G G
Sbjct: 656 DRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKG 829



 Score = 30.4 bits (67), Expect = 1.00
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 172 KISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESD---PNLRNIELEGSFDQIKEA 228
           ++ V     G IIGKGG   +     + A + I   +++    N R + L GSFD+   A
Sbjct: 782 RLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRA 961

Query: 229 SNMV 232
             ++
Sbjct: 962 IELI 973


>BE805631 
          Length = 196

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 16/29 (55%), Positives = 18/29 (61%)
 Frame = +2

Query: 101 KTRICNKFNTAEGCKFGDKCHFAHGEWEL 129
           KT +C  +     CKFGDKC FAHG  EL
Sbjct: 5   KTEMCKNWELRGACKFGDKCCFAHGRHEL 91



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = +2

Query: 266 FKTKLCENFA-KGTCTFGERCHFAHGPAELR 295
           +KT++C+N+  +G C FG++C FAHG  EL+
Sbjct: 2   YKTEMCKNWELRGACKFGDKCCFAHGRHELK 94



 Score = 27.3 bits (59), Expect = 8.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 36  KSKPCTKFFSTAGCPFGESCHFLH 59
           K+K C ++  +  CP+G  C +LH
Sbjct: 122 KTKRC*QYHHSGYCPYGLRCQYLH 193


>AW279255 
          Length = 409

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
 Frame = +1

Query: 181 GAIIGKGGVNSKQICRQTGAKLS-IREH---ESDPNLRNIELEGSFDQIKEASNMVKDLL 236
           G IIG+GG   K +  ++GA++  I +H     D   R +++ G   QI+ A  ++K++ 
Sbjct: 25  GLIIGRGGETIKSLQTKSGARIQLIPQHLPEGDDSKERTVQVTGDKRQIEIAQELIKEV- 201

Query: 237 LTLQMSAPPKSNQG-----------GAGGPGGHGHHGSN 264
               M+ P K + G           G+GGP   G  GS+
Sbjct: 202 ----MNQPVKPSSGGFGQQAYRPPRGSGGPPQWGQRGSH 306


>TC208136 weakly similar to UP|Q84ZX0 (Q84ZX0) HEN4, partial (13%)
          Length = 1163

 Score = 37.7 bits (86), Expect = 0.006
 Identities = 25/92 (27%), Positives = 47/92 (50%), Gaps = 10/92 (10%)
 Frame = +1

Query: 166 GANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDP-----NLRNIELEG 220
           G+  T ++ V +S  G +IGKGGV   ++ + TGA + I   +  P     N + +++ G
Sbjct: 334 GSIVTVRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISG 513

Query: 221 SFDQIKEA-----SNMVKDLLLTLQMSAPPKS 247
            F  +++A       +  +L ++ Q SA  +S
Sbjct: 514 EFSSVQDALYNAMGRLRDNLFVSTQNSAGTRS 609


>BG510472 
          Length = 428

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 16/31 (51%), Positives = 20/31 (63%)
 Frame = +1

Query: 266 FKTKLCENFAKGTCTFGERCHFAHGPAELRK 296
           FKTKLC  + +G C     C FAHG A+LR+
Sbjct: 241 FKTKLCVLYQRGRCN-RHNCSFAHGSADLRR 330


>TC203702 weakly similar to GB|AAP68215.1|31711718|BT008776 At1g51580
           {Arabidopsis thaliana;} , partial (25%)
          Length = 1642

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
 Frame = +3

Query: 167 ANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHES----DPNLRNIELEGSF 222
           A   AK+ V +   G ++GKGG+   ++ R TGA + I   E       N   +++ GS 
Sbjct: 150 AAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQIKYISQNEEVVQVIGSL 329

Query: 223 DQIKEA----SNMVKDLLLTLQ----MSAPP 245
             +++A    +N +++ +  ++     SAPP
Sbjct: 330 QSVQDALFHITNRIRETIFPIRTPPNFSAPP 422


>TC228692 similar to UP|Q8S9A6 (Q8S9A6) Glucosyltransferase-3, partial (48%)
          Length = 775

 Score = 28.5 bits (62), Expect(2) = 0.050
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = +2

Query: 119 KCHFAHGEWELGKHIAPSFDDHRPIGHAPAGRIGGRMEPPPGP 161
           +CH  H    L  H +     HRP  H P  R   R  PPP P
Sbjct: 272 RCHRRHPLHHLPPHPS-DLHPHRPPSHGPHLRALPRHRPPPPP 397



 Score = 28.1 bits (61), Expect = 4.9
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +1

Query: 76  PSAQAPPRNVA--APPPPVPNGSTPAVKT 102
           PS   PP N +  +PPPP P+ ST ++++
Sbjct: 238 PSPATPPPNTSPLSPPPPPPSPSTASLRS 324



 Score = 25.0 bits (53), Expect(2) = 0.050
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 81  PPRNVAAPPPPVPNGSTPAVKT 102
           PP     PPPP P+ +TP   T
Sbjct: 202 PPXPRHXPPPPPPSPATPPPNT 267


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.316    0.135    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,806,785
Number of Sequences: 63676
Number of extensions: 300831
Number of successful extensions: 4317
Number of sequences better than 10.0: 164
Number of HSP's better than 10.0 without gapping: 3016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4089
length of query: 296
length of database: 12,639,632
effective HSP length: 97
effective length of query: 199
effective length of database: 6,463,060
effective search space: 1286148940
effective search space used: 1286148940
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)