TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0220.1
         (751 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BI968801 similar to GP|24461860|gb CTV.20 {Poncirus trifoliata},...   256  3e-68
BM732229                                                              180  2e-45
AW234331                                                              108  9e-24
TC211261                                                               44  3e-04
TC221434 weakly similar to UP|Q6PAK2 (Q6PAK2) SERTA domain conta...    35  0.16
TC215923 similar to GB|AAS68109.1|45592910|BT011785 At2g38360 {A...    33  0.36
TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, p...    32  0.79
TC218052 similar to UP|2A5D_YEAST (P38903) Serine/threonine prot...    32  0.79
TC206330 weakly similar to UP|Q93W03 (Q93W03) AT3g56130/F18O21_9...    32  1.0
TC233713 similar to GB|AAP31963.1|30387595|BT006619 At1g01300 {A...    32  1.0
AW705224 weakly similar to GP|9759480|dbj| serine/threonine prot...    32  1.4
TC205769 similar to UP|Q9DVW0 (Q9DVW0) PxORF73 peptide, partial ...    32  1.4
TC215880 similar to UP|IF5_PHAVU (P48724) Eukaryotic translation...    31  1.8
TC205939 weakly similar to UP|Q761Z8 (Q761Z8) BRI1-KD interactin...    31  1.8
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara...    31  1.8
TC214014                                                               31  1.8
TC207176                                                               31  1.8
CK605675                                                               31  1.8
TC214121 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive eleme...    31  1.8
TC206332                                                               31  1.8

>BI968801 similar to GP|24461860|gb CTV.20 {Poncirus trifoliata}, partial
           (0%)
          Length = 660

 Score =  256 bits (654), Expect = 3e-68
 Identities = 126/206 (61%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
 Frame = -1

Query: 519 NMTMVATTYVTANSCPESLIVEVLVAGFCGQLKGWWDNYLTEDEKNQILTAIKTDEEGNP 578
           +MTMVAT Y T++ C    I+++LVAGF GQLK WWDNYLT +EK +I +A+KTD  G  
Sbjct: 657 HMTMVATAYQTSHECSXXXIIDILVAGFSGQLKRWWDNYLTNEEK*KIYSAVKTDLNGKV 478

Query: 579 II-EDGKFILDAVNSLIFTIAQHFVGDPSLIKDRFGDLLSNLKCKSLGDFRWYKDTFLTR 637
           I  +D K ILDAVN+LIFTIAQHF+GDPSL KDR  +LLSNLKC++L DFRWY+DTFLTR
Sbjct: 477 ITNDDDKEILDAVNTLIFTIAQHFIGDPSLWKDRSAELLSNLKCRTLADFRWYRDTFLTR 298

Query: 638 VYTREDSQQAFWKEKFLAGLPKSFGDKVREKLRSQNPGGEIPYHTLSYGQLIAIIQRVAL 697
           VYTREDSQQ F KEKFLAGLP+S GDKVR+K+RSQ+  G+IPY +LSYGQLI+ +Q+VA 
Sbjct: 297 VYTREDSQQPF*KEKFLAGLPRSLGDKVRDKIRSQSANGDIPYESLSYGQLISYVQKVAX 118

Query: 698 KICQDDRIQQQLTKEKSQNRRDLGTF 723
           K     +  + +++ K  N+     F
Sbjct: 117 KNLSG*QNSKAISQRKGSNKEGFRFF 40



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 24/36 (66%), Positives = 31/36 (85%)
 Frame = -2

Query: 693 QRVALKICQDDRIQQQLTKEKSQNRRDLGTFCEQFG 728
           +R   KICQDD+IQ+QL KEK+Q ++DLG+FCEQFG
Sbjct: 131 KR*XXKICQDDKIQRQLAKEKAQTKKDLGSFCEQFG 24


>BM732229 
          Length = 421

 Score =  180 bits (456), Expect = 2e-45
 Identities = 90/139 (64%), Positives = 108/139 (76%), Gaps = 3/139 (2%)
 Frame = -3

Query: 483 DLLLEE--SSNFKSFSANNVYEWNIDGENEYGITKILQNMTMVATTYVTANSCPESLIVE 540
           DLLLEE   +NFKSFSANN+YEWNID + EY I   LQ+MTMVAT Y T++ C E  I++
Sbjct: 419 DLLLEERGENNFKSFSANNIYEWNIDAQTEYNIMNTLQHMTMVATAYQTSHECSEETIID 240

Query: 541 VLVAGFCGQLKGWWDNYLTEDEKNQILTAIKTDEEGNPII-EDGKFILDAVNSLIFTIAQ 599
           +LVAGF GQLKGWWDNYLT +EK++I +A+KTD  G  I  +D K I DAVN+LIFTIAQ
Sbjct: 239 ILVAGFSGQLKGWWDNYLTNEEKSKIYSAVKTDLNGKVITNDDDKEIPDAVNTLIFTIAQ 60

Query: 600 HFVGDPSLIKDRFGDLLSN 618
           HF+GDPSL  DR  +LLSN
Sbjct: 59  HFIGDPSLW*DRSAELLSN 3


>AW234331 
          Length = 370

 Score =  108 bits (270), Expect = 9e-24
 Identities = 54/119 (45%), Positives = 74/119 (61%), Gaps = 12/119 (10%)
 Frame = +2

Query: 179 FVIDKEGIRADFYSDVRTKQREWFFAKYQGKKRKKIQEKFYGFLEQTQQNLFFFDWFQSY 238
           F IDKE +R DFYS     QR WFF  Y+G  RK+I++KFY F+E+ + N+ FFDWF +Y
Sbjct: 11  FSIDKETLRKDFYSSENEPQRRWFFQHYKGTNRKQIKDKFYKFVERVKINILFFDWFHAY 190

Query: 239 AIKKKISYPYQVDMI---------KWQHKDGKETLSNLPPKTPFLL---KGAQSTPVLA 285
           AI+K I YP++ D+I          W+ KDG+   S LPP T + L   K + + PV+A
Sbjct: 191 AIRKDIDYPWKQDIIGDPTTNVITNWKIKDGELIQSELPPATQYQLPNVKDSNNKPVMA 367


>TC211261 
          Length = 520

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 24/55 (43%), Positives = 31/55 (55%), Gaps = 3/55 (5%)
 Frame = -2

Query: 469 RKETKLYYPRATAPDLLLEE---SSNFKSFSANNVYEWNIDGENEYGITKILQNM 520
           R  TKLYY + T PDL L+E   +S  + F    +   NIDG+ EY  T  LQ+M
Sbjct: 504 RNSTKLYYQKVTIPDLWLQERDLNSKLQRFRTMGIC**NIDGQIEYNTTHTLQHM 340


>TC221434 weakly similar to UP|Q6PAK2 (Q6PAK2) SERTA domain containing 4,
           partial (7%)
          Length = 820

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 33/139 (23%), Positives = 55/139 (38%), Gaps = 5/139 (3%)
 Frame = +3

Query: 330 RKGKGKVKTEPSSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQTLRAKNESDKELLQKV 389
           R     +  EPS  +D       ++ KP+     + N   HS +T+   +++        
Sbjct: 90  RSASSTMSIEPSDKNDSHASNSHEISKPVETESSLLN---HSDKTISTSSDA-------- 236

Query: 390 VEQLQLLNQVIPETPEPTPEAVSNPAVSAPAPPKTRTSTRNT----STSLNNIEDGKVES 445
           +E L+  +  I   P P     S+   S+P PP   +S   +    S S  N     ++S
Sbjct: 237 LEPLKTESNSISVIPSPVTSLSSSKIPSSPLPPLDTSSVTESGDTESASTGNDSSASLQS 416

Query: 446 DSE-DQSVKSIPVNTVIHN 463
            S+ D S  +    TVI N
Sbjct: 417 SSDTDISHNTKATLTVIKN 473


>TC215923 similar to GB|AAS68109.1|45592910|BT011785 At2g38360 {Arabidopsis
           thaliana;} , partial (76%)
          Length = 1055

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 400 IPETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTS 434
           +P +P PTP+    P V A AP + R +TR ++ S
Sbjct: 152 LPSSPSPTPKQPREPPVQAAAPSRLRPTTRPSALS 256


>TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, partial (68%)
          Length = 1306

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 21/87 (24%), Positives = 32/87 (36%)
 Frame = +1

Query: 373 QTLRAKNESDKELLQKVVEQLQLLNQVIPETPEPTPEAVSNPAVSAPAPPKTRTSTRNTS 432
           QT     E++   + K  E   +      E P     A   PA  APAP  T  + +  +
Sbjct: 118 QTPTTVPENETTEVSKTQETTPVTEAPATEQPAAEVPATEQPAAEAPAPESTTEAPKEET 297

Query: 433 TSLNNIEDGKVESDSEDQSVKSIPVNT 459
           T        K  ++   +  K +PV T
Sbjct: 298 TEAPTETVEKTTTEVAPEEPKEVPVET 378


>TC218052 similar to UP|2A5D_YEAST (P38903) Serine/threonine protein
           phosphatase 2A, 56 kDa regulatory subunit, delta isoform
           (PP2A, B subunit, B' delta isoform) (RTS1 protein) (SCS1
           protein), partial (3%)
          Length = 1248

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 30/98 (30%), Positives = 39/98 (39%)
 Frame = +1

Query: 341 SSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQTLRAKNESDKELLQKVVEQLQLLNQVI 400
           S SSD  +  G    K +  +   S R     +  R KN S  E  QK V  L LL    
Sbjct: 181 SESSDAFLKNGTTKRKYVRDNNYTSKR-----RIRRRKNTSSPEKKQKPVVTLPLL---- 333

Query: 401 PETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNI 438
           PETP+       +   S   P +   +  N S +LN I
Sbjct: 334 PETPDRKDSRAKDLTPSPAKPVRNNNNNNNKSKNLNII 447


>TC206330 weakly similar to UP|Q93W03 (Q93W03) AT3g56130/F18O21_90, partial
           (65%)
          Length = 1307

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 33/138 (23%), Positives = 53/138 (37%), Gaps = 22/138 (15%)
 Frame = +2

Query: 315 YLQTLGESQSHDDSSRKGK------GK----VKTEPSSSSDLDIPKGCQLEKPL------ 358
           ++Q L   Q H +S  KGK      GK    +    S +S  + P+G   +KPL      
Sbjct: 329 FIQHLAYGQKHINSHTKGKNTLISCGKTAEAINASKSDASSDNTPQGSLEKKPLQTATFP 508

Query: 359 --FKHFQISNRSRHSAQTLRAK-NESDKELLQKVVEQLQLLNQVIPETPEPTPEA---VS 412
             F+   +          L+ K  + +  + + +      L+ + P TP P P      S
Sbjct: 509 NGFEALVLEVCDETEIAELKVKVGDFEMHIKRNIGATKVPLSNISPTTPPPIPSKPMDES 688

Query: 413 NPAVSAPAPPKTRTSTRN 430
            P    P+PPK+     N
Sbjct: 689 APGSLPPSPPKSSPEKNN 742


>TC233713 similar to GB|AAP31963.1|30387595|BT006619 At1g01300 {Arabidopsis
           thaliana;} , partial (33%)
          Length = 516

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 401 PETPEPTPEAVSNP-AVSAPAPPKTRTSTRNTST 433
           P  PEPTPE+ + P + +A  PP   T TR  ST
Sbjct: 218 PPNPEPTPESPAGPLSAAAWTPPAATTRTRFAST 319


>AW705224 weakly similar to GP|9759480|dbj| serine/threonine protein
           kinase-like protein {Arabidopsis thaliana}, partial
           (26%)
          Length = 469

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 15/36 (41%), Positives = 22/36 (60%), Gaps = 2/36 (5%)
 Frame = +3

Query: 401 PETPE--PTPEAVSNPAVSAPAPPKTRTSTRNTSTS 434
           P TP   PTP +  +P  S+PAPP T   T +++T+
Sbjct: 162 PWTPAGPPTPTSSRSPGTSSPAPPTTSALTSSSATA 269


>TC205769 similar to UP|Q9DVW0 (Q9DVW0) PxORF73 peptide, partial (13%)
          Length = 464

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 402 ETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTS 434
           + PEP P  +S+P    P PP + T+T  +S S
Sbjct: 361 QNPEPPPSPLSHPPPPPPTPPPSTTATSPSSDS 263


>TC215880 similar to UP|IF5_PHAVU (P48724) Eukaryotic translation initiation
           factor 5 (eIF-5), partial (93%)
          Length = 1624

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 24/97 (24%), Positives = 41/97 (41%), Gaps = 6/97 (6%)
 Frame = +1

Query: 80  DRRNSFSI--PRSIRTSSDFQSAMSRRSFSMSRR----NQPESSARPSLSHEGSTIHLAG 133
           D+  +F I  P  ++  S  + AM R      +     ++ +   +  +  +GS+    G
Sbjct: 316 DKLTTFIIKNPPEVKKGSKDKKAMRRAEKERQKEGELADEEQKKVKKEVKKKGSSSSKDG 495

Query: 134 YVNTTPVKTTYDKSDEDHQSTLSPTYSSLETPGETSD 170
              +T  K     SDEDH    SPT+S ++   E  D
Sbjct: 496 TAKSTSSKKKASGSDEDH---TSPTHSQIDEKEEAPD 597


>TC205939 weakly similar to UP|Q761Z8 (Q761Z8) BRI1-KD interacting protein
           116 (Fragment), partial (46%)
          Length = 1434

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/92 (29%), Positives = 46/92 (49%)
 Frame = +3

Query: 138 TPVKTTYDKSDEDHQSTLSPTYSSLETPGETSDFIGAITTEFVIDKEGIRADFYSDVRTK 197
           +P K+ +D  DED+ S  S + +S  T  ++   +G+  T    D+   R +FY  +  K
Sbjct: 558 SPRKSYHD--DEDNWSAASSSVASART-AKSKVTVGSAPTFRCSDRAEKRREFYLKLEEK 728

Query: 198 QREWFFAKYQGKKRKKIQEKFYGFLEQTQQNL 229
            R     K Q + RKK +E     ++Q ++NL
Sbjct: 729 HRALEEEKNQYEARKKEEED--AAIKQLRKNL 818


>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
           arabinogalactan-protein 2, partial (57%)
          Length = 1652

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/38 (44%), Positives = 18/38 (46%), Gaps = 4/38 (10%)
 Frame = +2

Query: 401 PETPEPTPEAVSNPAVSAPA----PPKTRTSTRNTSTS 434
           P  P P P A S    S PA    PPKT T+    STS
Sbjct: 353 PPAPPPAPPATSTSPTSRPARSASPPKTTTAPSTPSTS 466


>TC214014 
          Length = 454

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/31 (41%), Positives = 18/31 (57%)
 Frame = +2

Query: 399 VIPETPEPTPEAVSNPAVSAPAPPKTRTSTR 429
           V P TP P P ++ +P V+ P P   R+S R
Sbjct: 224 VRPNTPPPKPLSIPSPTVAPPTPSPPRSSMR 316


>TC207176 
          Length = 1616

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 28/99 (28%), Positives = 42/99 (42%)
 Frame = -3

Query: 324  SHDDSSRKGKGKVKTEPSSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQTLRAKNESDK 383
            SHD    +   ++K+   S   L         +PL    Q SN S+  ++TL  KN   K
Sbjct: 1206 SHDVPMLESSQQLKSSNGSKQWLQT-----FSQPLQSTLQASNSSQ--SKTLHQKNN*KK 1048

Query: 384  ELLQKVVEQLQLLNQVIPETPEPTPEAVSNPAVSAPAPP 422
            +   K V  L    Q IP    P P    + +++A +PP
Sbjct: 1047 KKTMK*VLFLLFHRQAIPTGSAPPPSLSPSLSLTALSPP 931


>CK605675 
          Length = 408

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 22/76 (28%), Positives = 36/76 (46%)
 Frame = -2

Query: 349 PKGCQLEKPLFKHFQISNRSRHSAQTLRAKNESDKELLQKVVEQLQLLNQVIPETPEPTP 408
           P     +KPLF+ F+  NR +  +  L+ K +  K L  K  +++   ++    T    P
Sbjct: 224 PNSTTFQKPLFQTFK-QNRQKKQSSNLKIKRKKHKTLNAK--KKVG**SK*GKHTNGS*P 54

Query: 409 EAVSNPAVSAPAPPKT 424
           E  + P  + P PPKT
Sbjct: 53  EKKARPTHNKPTPPKT 6


>TC214121 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
           factor 4-like protein, partial (50%)
          Length = 965

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 23/99 (23%), Positives = 35/99 (35%)
 Frame = +1

Query: 401 PETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESDSEDQSVKSIPVNTV 460
           P TP P   A   P  ++P PP T T+T  T T                   + + +N  
Sbjct: 226 PMTPPPATSAAPKPKPTSPCPPTTTTTTTLT*T-----------------KTRVLTLNLT 354

Query: 461 IHNSRNQWRKETKLYYPRATAPDLLLEESSNFKSFSANN 499
           +      W    +   PRA  P      S ++ S S ++
Sbjct: 355 VPARAAPWSPPPRSVKPRAAPPPPQSTVSRSYPSSSKSS 471


>TC206332 
          Length = 519

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 16/107 (14%)
 Frame = +1

Query: 268 PPKTPFLLKGAQSTPVLAS---PFKTREEEGEVTSKDIKDLMEQANYTNK---YLQTLGE 321
           PP  PF     +S+P + S   P  T         K     +  A + +K   ++Q L  
Sbjct: 169 PPILPFPFLPMESSPAIRSFHYPMGTMSHVRACLEKQAVLPIHNARWNSKRRLFIQHLAY 348

Query: 322 SQSHDDSSRKGKGK----------VKTEPSSSSDLDIPKGCQLEKPL 358
            Q H +S  KGK            + T  S +S  + P+G   +KPL
Sbjct: 349 GQKHINSHMKGKSTLVSSAKTAEAINTSNSDASSDNTPQGSLEKKPL 489


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.314    0.131    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,589,572
Number of Sequences: 63676
Number of extensions: 449739
Number of successful extensions: 3181
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 2848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3147
length of query: 751
length of database: 12,639,632
effective HSP length: 104
effective length of query: 647
effective length of database: 6,017,328
effective search space: 3893211216
effective search space used: 3893211216
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)