BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0207.3
(227 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203635 similar to PIR|T46225|T46225 alpha NAC-like protein - A... 372 e-104
TC203654 similar to PIR|T46225|T46225 alpha NAC-like protein - A... 367 e-102
TC204851 similar to GB|AAM16178.1|20334844|AY094022 AT3g12390/T2... 247 3e-66
TC204849 similar to GB|AAM16178.1|20334844|AY094022 AT3g12390/T2... 244 2e-65
TC204848 similar to UP|Q6ICZ8 (Q6ICZ8) At5g13850, partial (89%) 242 9e-65
TC204850 similar to GB|AAM16178.1|20334844|AY094022 AT3g12390/T2... 240 4e-64
AW099376 similar to GP|13899101|gb| alpha NAC-like protein {Arab... 123 8e-29
BE802762 similar to GP|10177651|dbj contains similarity to nasce... 121 2e-28
TC215452 similar to UP|P93488 (P93488) NAP1Ps, partial (29%) 53 1e-07
TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%) 49 1e-06
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 49 2e-06
TC215451 weakly similar to UP|Q94K07 (Q94K07) Nucleosome assembl... 47 5e-06
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 47 7e-06
TC218919 homologue to UP|Q39892 (Q39892) Nucleosome assembly pro... 45 2e-05
TC215450 similar to UP|P93488 (P93488) NAP1Ps, partial (30%) 45 2e-05
TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Pro... 45 3e-05
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 45 3e-05
TC218918 UP|Q39892 (Q39892) Nucleosome assembly protein 1, complete 45 3e-05
TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g4... 44 8e-05
TC204794 similar to UP|Q9LK52 (Q9LK52) Dbj|BAA90629.1, complete 43 1e-04
>TC203635 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
thaliana {Arabidopsis thaliana;} , partial (71%)
Length = 1007
Score = 372 bits (955), Expect = e-104
Identities = 195/227 (85%), Positives = 206/227 (89%)
Frame = +1
Query: 1 MAPGPVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDD 60
M+PGPVVDAS E +A +Q+ S ++ T KK PQPQEDDAP+VED+KDDDKD DDDED+DD
Sbjct: 55 MSPGPVVDASPEVDAEQQLPSVDDATQKKIPQPQEDDAPLVEDLKDDDKD--DDDEDDDD 228
Query: 61 DDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 120
DDEDD KED A GG+EGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP
Sbjct: 229 DDEDD-KEDDAQGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 405
Query: 121 DVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQPEEE 180
DVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSV AKQ+ AA QPEEE
Sbjct: 406 DVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVTAKQEDAAAA-AAQPEEE 582
Query: 181 EEVDETGVEPHDIDLVMTQAGVSRGKAVKALKTHNGDIVGAIMELTT 227
EEVDETGVEPHDIDLVMTQAGVSR KAVKALKTHNGDIVGAIMELTT
Sbjct: 583 EEVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 723
>TC203654 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
thaliana {Arabidopsis thaliana;} , partial (76%)
Length = 1139
Score = 367 bits (942), Expect = e-102
Identities = 189/228 (82%), Positives = 205/228 (89%), Gaps = 1/228 (0%)
Frame = +3
Query: 1 MAPGPVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDD 60
M+PGPV+DA+++ A +Q+ S ++ LKKK PQEDDAPIVEDVKDDDK+E EDED+
Sbjct: 87 MSPGPVIDAATDPGADQQIPSVDDAILKKKAHPQEDDAPIVEDVKDDDKEET---EDEDE 257
Query: 61 DDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 120
DD+DDDKED A GG+EG KQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP
Sbjct: 258 DDDDDDKEDDAQGGAEGGKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 437
Query: 121 DVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQP-EE 179
DVFKSPNSETY+IFGEAKIEDLSSQLQTQAAQQFRMPD+GSV+AKQDQ AA QP EE
Sbjct: 438 DVFKSPNSETYIIFGEAKIEDLSSQLQTQAAQQFRMPDVGSVLAKQDQDAAAAAAQPEEE 617
Query: 180 EEEVDETGVEPHDIDLVMTQAGVSRGKAVKALKTHNGDIVGAIMELTT 227
EEEVDETGVEPHDIDLVMTQAGVSR KAVKALKTHNGDIVGAIMELTT
Sbjct: 618 EEEVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 761
>TC204851 similar to GB|AAM16178.1|20334844|AY094022 AT3g12390/T2E22_130
{Arabidopsis thaliana;} , partial (86%)
Length = 868
Score = 247 bits (631), Expect = 3e-66
Identities = 137/224 (61%), Positives = 166/224 (73%), Gaps = 2/224 (0%)
Frame = +2
Query: 5 PVVDASSEAEALEQVLSAEETTLKKKPQPQ-EDDAPIVEDVKDDDKDEADDDEDEDDDDE 63
PV D S++ + EE + Q + DD P+ ED D DE +DD+D D+DDE
Sbjct: 38 PVCDTKSKSLFTMTTQTQEELLAQHLEQQKIHDDEPVAED----DNDEEEDDDD-DEDDE 202
Query: 64 DDDKEDGALGGSEG-SKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDV 122
DDD DG G + G SKQ+RSEKKSRKAMLKLG+KPVTGVSRVT+K++KNILF ISKPDV
Sbjct: 203 DDDHADGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDV 382
Query: 123 FKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQPEEEEE 182
FKSP S+TY+IFGEAKIEDLSSQLQTQAA+QF+ P++ +V +K + A +++EE
Sbjct: 383 FKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGSKPESSAVA-----QDDEE 547
Query: 183 VDETGVEPHDIDLVMTQAGVSRGKAVKALKTHNGDIVGAIMELT 226
VDE GV+P DI+LVMTQAGVSR KAVKALK GDIV AIMELT
Sbjct: 548 VDEAGVDPKDIELVMTQAGVSRPKAVKALKAAGGDIVAAIMELT 679
>TC204849 similar to GB|AAM16178.1|20334844|AY094022 AT3g12390/T2E22_130
{Arabidopsis thaliana;} , partial (96%)
Length = 883
Score = 244 bits (623), Expect = 2e-65
Identities = 136/223 (60%), Positives = 166/223 (73%), Gaps = 1/223 (0%)
Frame = +2
Query: 5 PVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDED 64
P + + A+ E++L+ + Q D P+VED DDD++E DDD DDDED
Sbjct: 47 P*IQVTMTAQTQEELLAQH-----LEQQKIHDGEPVVED--DDDEEEDDDD----DDDED 193
Query: 65 DDKEDGALGGSEG-SKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF 123
DD +G G + G SKQ+RSEKKSRKAMLKLG+KPVTGVSRVT+K++KNILF ISKPDVF
Sbjct: 194 DDHAEGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVF 373
Query: 124 KSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQPEEEEEV 183
KSP SETY+IFGEAKIEDLSSQLQTQAA+QF+ P++ +V K + A +++EEV
Sbjct: 374 KSPTSETYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGLKPESSAVA-----QDDEEV 538
Query: 184 DETGVEPHDIDLVMTQAGVSRGKAVKALKTHNGDIVGAIMELT 226
DE GV+P DI+LVMTQAGVSR KAVKALK +GDIV AIMELT
Sbjct: 539 DEAGVDPKDIELVMTQAGVSRPKAVKALKAASGDIVAAIMELT 667
>TC204848 similar to UP|Q6ICZ8 (Q6ICZ8) At5g13850, partial (89%)
Length = 916
Score = 242 bits (618), Expect = 9e-65
Identities = 132/214 (61%), Positives = 163/214 (75%)
Frame = +3
Query: 13 AEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGAL 72
A+ E++L+A+ + Q DD P+VED DD++DEDDDDEDDD +G
Sbjct: 84 AQTQEELLAAD-----LEQQKIHDDEPVVED---------DDEDDEDDDDEDDDNVEGDA 221
Query: 73 GGSEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYV 132
G SKQ+RSEKKSRKAMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+
Sbjct: 222 SGR--SKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYI 395
Query: 133 IFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQPEEEEEVDETGVEPHD 192
IFGEAKIEDLSSQLQTQAA+QF+ P++ + +K + AA +++E+VDETGV+P D
Sbjct: 396 IFGEAKIEDLSSQLQTQAAEQFKAPNVSNDGSKPETSAAA----AQDDEDVDETGVDPKD 563
Query: 193 IDLVMTQAGVSRGKAVKALKTHNGDIVGAIMELT 226
I+LVMTQAGV R +AVKALK NGDIV AIMELT
Sbjct: 564 IELVMTQAGVLRSRAVKALKAANGDIVAAIMELT 665
>TC204850 similar to GB|AAM16178.1|20334844|AY094022 AT3g12390/T2E22_130
{Arabidopsis thaliana;} , partial (85%)
Length = 878
Score = 240 bits (612), Expect = 4e-64
Identities = 130/196 (66%), Positives = 153/196 (77%), Gaps = 1/196 (0%)
Frame = +1
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEG-SKQSRSEKKSRKA 90
Q DD P+VED DD +E DDD DDDEDDD ++G G + G SKQ+RSEKKSRKA
Sbjct: 100 QKIHDDEPVVED---DDDEEVDDD----DDDEDDDHDEGLEGDASGRSKQTRSEKKSRKA 258
Query: 91 MLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQA 150
MLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGEAKIEDLSSQLQTQA
Sbjct: 259 MLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQA 438
Query: 151 AQQFRMPDMGSVMAKQDQGTAADGGQPEEEEEVDETGVEPHDIDLVMTQAGVSRGKAVKA 210
A+QF+ P++ + K + A +++EEVDE GV+P DI+LVMTQAGVSR KAVKA
Sbjct: 439 AEQFKAPNLSNDGLKPESSAVA-----QDDEEVDEAGVDPKDIELVMTQAGVSRPKAVKA 603
Query: 211 LKTHNGDIVGAIMELT 226
LK GDIV AIMELT
Sbjct: 604 LKAAGGDIVAAIMELT 651
>AW099376 similar to GP|13899101|gb| alpha NAC-like protein {Arabidopsis
thaliana}, partial (32%)
Length = 268
Score = 123 bits (308), Expect = 8e-29
Identities = 66/89 (74%), Positives = 70/89 (78%)
Frame = +2
Query: 74 GSEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI 133
G++GS+ S +EK SRKAMLKLGLKPVTGVSR TI T NIL FI KPDVFKSPNSETY I
Sbjct: 2 GADGSQHS*TEKNSRKAMLKLGLKPVTGVSRATINSTYNILLFIYKPDVFKSPNSETYRI 181
Query: 134 FGEAKIEDLSSQLQTQAAQQFRMPDMGSV 162
GEAKIED SSQL TQA QQ PD SV
Sbjct: 182 LGEAKIED*SSQLLTQADQQLMTPDSASV 268
>BE802762 similar to GP|10177651|dbj contains similarity to nascent
polypeptide associated complex alpha
chain~gene_id:MAC12.19, partial (49%)
Length = 325
Score = 121 bits (304), Expect = 2e-28
Identities = 67/119 (56%), Positives = 84/119 (70%), Gaps = 7/119 (5%)
Frame = +2
Query: 79 KQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAK 138
+Q+ SEKK KAMLKLG+KPVTGVSRVT +R+K+IL IS+PDV KSP S+TY+IFGEAK
Sbjct: 2 QQTISEKKMSKAMLKLGMKPVTGVSRVTAERSKDILLCISRPDVIKSPTSDTYIIFGEAK 181
Query: 139 IEDLSSQLQTQAAQQFRMPDMGSVMAKQDQGTAADGGQPE-------EEEEVDETGVEP 190
IED S Q+QTQAA+QF P++ + DG PE + E+V ETGV+P
Sbjct: 182 IEDWSLQVQTQAAEQFNAPNV-----------SYDGSNPETCADAV*DHEDVVETGVDP 325
>TC215452 similar to UP|P93488 (P93488) NAP1Ps, partial (29%)
Length = 609
Score = 52.8 bits (125), Expect = 1e-07
Identities = 28/59 (47%), Positives = 39/59 (65%)
Frame = +3
Query: 34 QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAML 92
Q D+ +ED +DD+ E DDDEDE+DDD+DDD +D S+ K+S + KKS +A L
Sbjct: 114 QGDEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDE-EESKTKKKSSAPKKSGRAQL 287
Score = 30.0 bits (66), Expect = 0.90
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 34 QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSR 82
+EDD ED DDD D+ D++E + K+ G +G + R
Sbjct: 165 EEDDDEDEEDDDDDDDDDDDEEESKTKKKSSAPKKSGRAQLGDGQQGER 311
>TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%)
Length = 1495
Score = 49.3 bits (116), Expect = 1e-06
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +2
Query: 34 QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAML 92
Q D+ +ED +DD+ E DDDE+E++D++DDD ED S+ K+S + KKS +A L
Sbjct: 1019 QGDEFGDLEDDEDDEDIEEDDDEEEEEDEDDDDDEDDE-EESKTKKKSSAPKKSGRAQL 1192
Score = 37.7 bits (86), Expect = 0.004
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 42 EDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRK 89
E ++ D+ + +DDED++D +EDDD+E+ + + E K++K
Sbjct: 1010 EAIQGDEFGDLEDDEDDEDIEEDDDEEEEEDEDDDDDEDDEEESKTKK 1153
Score = 34.3 bits (77), Expect = 0.048
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 48 DKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLKLG 95
D ++ +DDED ++DD+++++ED E ++ KK A K G
Sbjct: 1037 DLEDDEDDEDIEEDDDEEEEEDEDDDDDEDDEEESKTKKKSSAPKKSG 1180
Score = 31.6 bits (70), Expect = 0.31
Identities = 17/61 (27%), Positives = 30/61 (48%)
Frame = +2
Query: 34 QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLK 93
+EDD E+ +DDD DE D++E + K+ G +G + R + ++ M K
Sbjct: 1070 EEDDDEEEEEDEDDDDDEDDEEESKTKKKSSAPKKSGRAQLGDGQQGERPPECKQQ*MQK 1249
Query: 94 L 94
+
Sbjct: 1250 V 1252
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 48.9 bits (115), Expect = 2e-06
Identities = 23/72 (31%), Positives = 39/72 (53%)
Frame = +2
Query: 14 EALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALG 73
E EQV E L ++ + + V D +DD+DE +DD+D++ DD DD+++D G
Sbjct: 236 ELSEQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDG 415
Query: 74 GSEGSKQSRSEK 85
G + + E+
Sbjct: 416 GDDDDDEDDEEE 451
Score = 44.7 bits (104), Expect = 4e-05
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +2
Query: 11 SEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDE-----DDDDEDD 65
+E + L + E ++ + EDD ED DD+ D+ DD+ED+ DDDD++D
Sbjct: 260 NEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGGDDDDDED 439
Query: 66 DKEDGAL--GGSEGSKQSRSEKKS 87
D+E+G + GG + S+ S
Sbjct: 440 DEEEGDVQRGGEPDDDDNDSDDDS 511
Score = 41.6 bits (96), Expect = 3e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 23 EETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALG 73
EE +++ +P +DD +D D++DDDEDED++DE++ E+ LG
Sbjct: 446 EEGDVQRGGEPDDDD--------NDSDDDSDDDEDEDEEDEEEQGEEEDLG 574
Score = 40.8 bits (94), Expect = 5e-04
Identities = 26/95 (27%), Positives = 41/95 (42%), Gaps = 24/95 (25%)
Frame = +2
Query: 6 VVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDD----- 60
V + E E++++V+ E ++ +D+ +D +DD D DDD+DEDD
Sbjct: 278 VEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGGDDDDDEDDEEEGD 457
Query: 61 -------------------DDEDDDKEDGALGGSE 76
DDED+D+ED G E
Sbjct: 458 VQRGGEPDDDDNDSDDDSDDDEDEDEEDEEEQGEE 562
Score = 40.4 bits (93), Expect = 7e-04
Identities = 23/61 (37%), Positives = 32/61 (51%), Gaps = 9/61 (14%)
Frame = +2
Query: 34 QEDDAPIVEDVKDDDKDEADDDE---------DEDDDDEDDDKEDGALGGSEGSKQSRSE 84
+EDDAP D DDD DE D++E D+DD+D DDD +D E ++ E
Sbjct: 392 EEDDAP---DGGDDDDDEDDEEEGDVQRGGEPDDDDNDSDDDSDDDEDEDEEDEEEQGEE 562
Query: 85 K 85
+
Sbjct: 563 E 565
Score = 35.4 bits (80), Expect = 0.021
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Frame = +2
Query: 21 SAEETTLKKKPQPQEDDAPIVEDVKDDDKDEAD----------DDEDEDDDDEDDDK 67
+AEE +P+E+ EDV D+D ++A+ DD D+DD EDD++
Sbjct: 602 TAEEEEASSDFEPEENGEEEEEDVDDEDCEKAEAPPKRKRSDKDDSDDDDGGEDDER 772
Score = 32.7 bits (73), Expect = 0.14
Identities = 12/49 (24%), Positives = 30/49 (60%)
Frame = +2
Query: 21 SAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKED 69
S + T + Q +E++ ++ + D++ + D+ D+ +DDED++++D
Sbjct: 215 SKMKATKELSEQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDD 361
Score = 28.9 bits (63), Expect = 2.0
Identities = 21/78 (26%), Positives = 36/78 (45%)
Frame = +2
Query: 8 DASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDK 67
D E E E+ E ++ +E++A D + +E ++E+ED DDED +K
Sbjct: 530 DEEDEEEQGEEEDLGTEYLIRPLETAEEEEAS-----SDFEPEENGEEEEEDVDDEDCEK 694
Query: 68 EDGALGGSEGSKQSRSEK 85
+ K+ RS+K
Sbjct: 695 AEAP------PKRKRSDK 730
>TC215451 weakly similar to UP|Q94K07 (Q94K07) Nucleosome assembly protein,
partial (20%)
Length = 777
Score = 47.4 bits (111), Expect = 5e-06
Identities = 23/53 (43%), Positives = 35/53 (65%)
Frame = +2
Query: 34 QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKK 86
Q D+ +ED +DD+ E DDDEDE+DDD+DDD +D ++S+++KK
Sbjct: 65 QGDEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDD-------DEEESKTKKK 202
Score = 41.2 bits (95), Expect = 4e-04
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKE 68
+ EDD I ED +D++D+ DDD+D+DD++E K+
Sbjct: 89 EDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESKTKK 199
Score = 36.2 bits (82), Expect = 0.013
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = +2
Query: 42 EDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLKL 94
E ++ D+ + +DDED++D +EDDD+++ + E K++K + +L
Sbjct: 56 EAIQGDEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESKTKKKV*QL 214
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 47.0 bits (110), Expect = 7e-06
Identities = 18/44 (40%), Positives = 31/44 (69%)
Frame = -1
Query: 42 EDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEK 85
E+ +D+D D+ DDDED+DDDD+D++ E G +G++ +E+
Sbjct: 418 EEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEE 287
Score = 44.3 bits (103), Expect = 5e-05
Identities = 23/77 (29%), Positives = 41/77 (52%), Gaps = 4/77 (5%)
Frame = -1
Query: 21 SAEETTLKKKPQP----QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSE 76
S ++ KK P+ E++ ED DD+D+ +DD+D+DDD+ED+ E+ G+E
Sbjct: 484 SNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAE 305
Query: 77 GSKQSRSEKKSRKAMLK 93
+ E+ + L+
Sbjct: 304 DEENEEDEEDEEEEALQ 254
Score = 36.6 bits (83), Expect = 0.010
Identities = 23/80 (28%), Positives = 37/80 (45%)
Frame = -1
Query: 10 SSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKED 69
S+ +A E E ++ DD ED DDD DE D+ +E+D+D +D+E+
Sbjct: 472 SNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEEN 293
Query: 70 GALGGSEGSKQSRSEKKSRK 89
E + + KK +K
Sbjct: 292 EEDEEDEEEEALQPPKKRKK 233
Score = 33.5 bits (75), Expect = 0.081
Identities = 18/41 (43%), Positives = 24/41 (57%), Gaps = 1/41 (2%)
Frame = -1
Query: 45 KDDDKDEADDDEDED-DDDEDDDKEDGALGGSEGSKQSRSE 84
K +D+ D E ED +DDE DD +DG G EG ++ SE
Sbjct: 631 KTQSQDKQRDAEGEDGNDDEGDDDDDGDGGFGEGEEELSSE 509
Score = 32.3 bits (72), Expect = 0.18
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -1
Query: 6 VVDASSEAEALEQVLSAEETTLK--KKPQPQEDDAPIVEDVKDDDKDEADDDEDE--DDD 61
VV A+ A L ++L T K +K Q Q+ + +DD+ + DDD D +
Sbjct: 709 VVKATLLAPDLYRLLLTNTPTTKGERKTQSQDKQRDAEGEDGNDDEGDDDDDGDGGFGEG 530
Query: 62 DEDDDKEDGALGGSEGSKQSRSEK 85
+E+ EDG G+ + +S S+K
Sbjct: 529 EEELSSEDGGGYGNNSNNKSNSKK 458
>TC218919 homologue to UP|Q39892 (Q39892) Nucleosome assembly protein 1,
partial (33%)
Length = 729
Score = 45.4 bits (106), Expect = 2e-05
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +1
Query: 42 EDVKDDDKDEADDDEDED---DDDEDDDKEDGALGGSEGSKQSRSEKKSRKA 90
ED++DD+ +E D+DEDED D+DEDD++ED ++ K+ + KKS KA
Sbjct: 181 EDLEDDEDEEEDEDEDEDEEYDEDEDDEEED----DTKTKKKLSAVKKSGKA 324
Score = 38.5 bits (88), Expect = 0.003
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +1
Query: 34 QEDDAPIVEDVKDDDKDEADD-----DEDEDDDDEDDDKEDGALGGSEGSKQSRS 83
Q D+ +ED +D+++DE +D DEDEDD++EDD K L + S ++++
Sbjct: 166 QGDEFEDLEDDEDEEEDEDEDEDEEYDEDEDDEEEDDTKTKKKLSAVKKSGKAQA 330
Score = 35.4 bits (80), Expect = 0.021
Identities = 15/54 (27%), Positives = 30/54 (54%)
Frame = +1
Query: 42 EDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLKLG 95
E + D+ ++ +DDEDE++D+++D+ E+ + + KK A+ K G
Sbjct: 157 EXAQGDEFEDLEDDEDEEEDEDEDEDEEYDEDEDDEEEDDTKTKKKLSAVKKSG 318
Score = 29.3 bits (64), Expect = 1.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDD 60
+ ED+ ++ +D++ DE +DDE+EDD
Sbjct: 190 EDDEDEEEDEDEDEDEEYDEDEDDEEEDD 276
>TC215450 similar to UP|P93488 (P93488) NAP1Ps, partial (30%)
Length = 672
Score = 45.4 bits (106), Expect = 2e-05
Identities = 23/59 (38%), Positives = 36/59 (60%)
Frame = +3
Query: 34 QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAML 92
Q D+ +ED +DD+ E DDDE+E++D++DDD ED + + +KKS +A L
Sbjct: 186 QGDEFGDLEDDEDDEDIEEDDDEEEEEDEDDDDDED------DEEESKTKKKKSGRAQL 344
Score = 39.7 bits (91), Expect = 0.001
Identities = 15/37 (40%), Positives = 26/37 (69%)
Frame = +3
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKE 68
+ EDD I ED ++++++ DDD+DEDD++E K+
Sbjct: 210 EDDEDDEDIEEDDDEEEEEDEDDDDDEDDEEESKTKK 320
Score = 37.7 bits (86), Expect = 0.004
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +3
Query: 42 EDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRK 89
E ++ D+ + +DDED++D +EDDD+E+ + + E K++K
Sbjct: 177 EAIQGDEFGDLEDDEDDEDIEEDDDEEEEEDEDDDDDEDDEEESKTKK 320
Score = 37.4 bits (85), Expect = 0.006
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = +3
Query: 43 DVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAMLKLG 95
D++DD+ DE +++D+++++ED+D +D E ++ KK + +LG
Sbjct: 204 DLEDDEDDEDIEEDDDEEEEEDEDDDD-----DEDDEEESKTKKKKSGRAQLG 347
>TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23),
partial (8%)
Length = 581
Score = 45.1 bits (105), Expect = 3e-05
Identities = 24/56 (42%), Positives = 28/56 (49%)
Frame = +2
Query: 29 KKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSE 84
K + DA ED DDD D+ +D ED DDDDEDD+ G GG E E
Sbjct: 242 KHTSEENKDASDTED--DDDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDDPE 403
Score = 43.1 bits (100), Expect = 1e-04
Identities = 18/28 (64%), Positives = 21/28 (74%)
Frame = +2
Query: 42 EDVKDDDKDEADDDEDEDDDDEDDDKED 69
ED DDD D +DD DEDDDDE+D+ ED
Sbjct: 437 EDDDDDDDDNDEDDGDEDDDDEEDEDED 520
Score = 42.7 bits (99), Expect = 1e-04
Identities = 20/58 (34%), Positives = 29/58 (49%)
Frame = +2
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRK 89
+ DD P + D D+ DDD+D+DD+DEDD ED E + + S+K
Sbjct: 377 EADSDDDPEANGGGESDDDDEDDDDDDDDNDEDDGDEDDDDEEDEDEDEETPQPPSKK 550
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 46 DDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRK 89
DDD ++ DDD+D++D+D+ D+ +D E + + K RK
Sbjct: 425 DDDDEDDDDDDDDNDEDDGDEDDDDEEDEDEDEETPQPPSKKRK 556
Score = 37.4 bits (85), Expect = 0.006
Identities = 15/43 (34%), Positives = 26/43 (59%)
Frame = +2
Query: 28 KKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDG 70
K + +D + +D DDD ++ +D +D+D+DDED +DG
Sbjct: 242 KHTSEENKDASDTEDDDDDDDVNDGEDGDDDDEDDEDFSGDDG 370
Score = 37.0 bits (84), Expect = 0.007
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 19/70 (27%)
Frame = +2
Query: 35 EDDAPIVEDVKDDDKD-----------EADDDED--------EDDDDEDDDKEDGALGGS 75
+DD ED DDD+D EAD D+D DDDDEDDD +D
Sbjct: 296 DDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDDPEANGGGESDDDDEDDDDDDDDNDED 475
Query: 76 EGSKQSRSEK 85
+G + E+
Sbjct: 476 DGDEDDDDEE 505
Score = 36.2 bits (82), Expect = 0.013
Identities = 25/87 (28%), Positives = 36/87 (40%), Gaps = 32/87 (36%)
Frame = +2
Query: 16 LEQVLSAEETTLKKKPQPQEDDAPIVEDVKD----DDKDE-------------------- 51
L+Q + T+ + K +D +DV D DD DE
Sbjct: 221 LDQPCKGKHTSEENKDASDTEDDDDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDDP 400
Query: 52 --------ADDDEDEDDDDEDDDKEDG 70
DDDED+DDDD+D+D++DG
Sbjct: 401 EANGGGESDDDDEDDDDDDDDNDEDDG 481
Score = 35.8 bits (81), Expect = 0.016
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Frame = +2
Query: 37 DAPIVEDVKDDDKDEADDDEDEDDDD--------EDDDKEDGALGGSEGSKQSRSE 84
D P ++ +A D ED+DDDD +DDD++D G +G +++ S+
Sbjct: 224 DQPCKGKHTSEENKDASDTEDDDDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSD 391
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 45.1 bits (105), Expect = 3e-05
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = -3
Query: 21 SAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQ 80
S ++ KK P E A E+ ++D+DE DD+D+DD+D+DDD E+ G E
Sbjct: 517 SNNKSNSKKAP---EGGAGGAEENGEEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDG 347
Query: 81 SRSEKKSRKAMLKLGLKP 98
+ E+ + L+P
Sbjct: 346 AEDEENEEDEEDEEALQP 293
Score = 34.7 bits (78), Expect = 0.036
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = -3
Query: 34 QEDDAPIVEDVKDDDKDEADDDED------EDDDDEDDDKEDGALGGSEGSKQSRSEKK 86
+ED+ +D DDD+D+ DDDE+ ED+D +D++ + E + + KK
Sbjct: 451 EEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEEDEEALQPPKKRKK 275
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/79 (30%), Positives = 38/79 (47%)
Frame = -3
Query: 6 VVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDD 65
VV AS A L ++L T K + + Q +D + +A+ ++ DD+ +DD
Sbjct: 742 VVKASLLAPDLYRLLLINTPTAKGESKIQSEDK----------QRDAEGEDGNDDEGDDD 593
Query: 66 DKEDGALGGSEGSKQSRSE 84
D DG G EG ++ SE
Sbjct: 592 DDGDGGFG--EGEEELSSE 542
Score = 32.7 bits (73), Expect = 0.14
Identities = 16/58 (27%), Positives = 32/58 (54%)
Frame = -3
Query: 29 KKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKK 86
++ + ++ D +D DDD DE D+ +E+D+D +D+E+ E + Q ++K
Sbjct: 451 EEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEEDEEALQPPKKRK 278
Score = 32.7 bits (73), Expect = 0.14
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -3
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRK 89
+ +++D +D +DD D+ ++DE +++DED +++ E + + KK +K
Sbjct: 448 EDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEENEEDEEDEEALQPPKKRKK 275
Score = 32.7 bits (73), Expect = 0.14
Identities = 20/59 (33%), Positives = 32/59 (53%), Gaps = 1/59 (1%)
Frame = -3
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDD-KEDGALGGSEGSKQSRSEKKSRK 89
+ ED+ +D D+D D+ DD+EDE ++ED+D ED E +++ K RK
Sbjct: 451 EEDEDEDGDDQDDDDEDDDD-DDEEDEAGEEEDEDGAEDEENEEDEEDEEALQPPKKRK 278
>TC218918 UP|Q39892 (Q39892) Nucleosome assembly protein 1, complete
Length = 1507
Score = 45.1 bits (105), Expect = 3e-05
Identities = 17/36 (47%), Positives = 30/36 (83%)
Frame = +1
Query: 34 QEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKED 69
Q D+ +ED +D+++DE +D+++EDD+DEDD++ED
Sbjct: 979 QGDEFEDLEDDEDEEEDEDEDEDEEDDEDEDDEEED 1086
Score = 41.2 bits (95), Expect = 4e-04
Identities = 22/49 (44%), Positives = 31/49 (62%)
Frame = +1
Query: 42 EDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKA 90
ED++DD+ +E +DEDED+D+EDD+ ED E +KKS KA
Sbjct: 994 EDLEDDEDEE--EDEDEDEDEEDDEDED----DEEEDDTKTKKKKSGKA 1122
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +1
Query: 5 PVVDASSEAEALEQVLSAEE------TTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDE 58
P DA + + E++ + E +TL+ K P E + D+ ++ +DDEDE
Sbjct: 841 PEDDADIDEDLAEELQNQMEQDYDIGSTLRDKIIPHAVSWFTGEAAQGDEFEDLEDDEDE 1020
Query: 59 -DDDDEDDDKEDGALGGSEGSKQSRSEKK 86
+D+DED+D+ED E ++++KK
Sbjct: 1021EEDEDEDEDEEDDEDEDDEEEDDTKTKKK 1107
Score = 36.2 bits (82), Expect = 0.013
Identities = 15/54 (27%), Positives = 30/54 (54%)
Frame = +1
Query: 35 EDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSR 88
++D ED +D++D+ D+D++E+DD + K+ G +G + E K +
Sbjct: 1009 DEDEEEDEDEDEDEEDDEDEDDEEEDDTKTKKKKSGKAQAGDGDGERPPECKQQ 1170
Score = 32.7 bits (73), Expect = 0.14
Identities = 22/93 (23%), Positives = 40/93 (42%), Gaps = 32/93 (34%)
Frame = +1
Query: 29 KKPQPQEDDAPIVEDVKDD----------------DK----------------DEADDDE 56
K P+ EDDA I ED+ ++ DK DE +D E
Sbjct: 826 KPPEVPEDDADIDEDLAEELQNQMEQDYDIGSTLRDKIIPHAVSWFTGEAAQGDEFEDLE 1005
Query: 57 DEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRK 89
D++D++ED+D+++ + + + K++K
Sbjct: 1006DDEDEEEDEDEDEDEEDDEDEDDEEEDDTKTKK 1104
>TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g47970
{Arabidopsis thaliana;} , partial (39%)
Length = 867
Score = 43.5 bits (101), Expect = 8e-05
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Frame = +1
Query: 35 EDDAPIVEDVKDDDKDEAD---------DDEDEDDDDEDDDKEDGALGGSE 76
EDDAP D DD+ +E + DD+D DDDDED+D+ED G E
Sbjct: 250 EDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEEDEEEQGEE 402
Score = 41.6 bits (96), Expect = 3e-04
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +1
Query: 32 QPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALG 73
+ +E+++ + + DD D DDDEDED++DE++ E+ LG
Sbjct: 289 EDEEEESDVQRGGEPDDDDNDDDDEDEDEEDEEEQGEEADLG 414
Score = 41.2 bits (95), Expect = 4e-04
Identities = 17/39 (43%), Positives = 27/39 (68%)
Frame = +1
Query: 36 DDAPIVEDVKDDDKDEADDDEDEDDDDEDDDKEDGALGG 74
DD ED +DDD+D+A D D+DDD++++++ D GG
Sbjct: 211 DDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEESDVQRGG 327
Score = 37.0 bits (84), Expect = 0.007
Identities = 19/62 (30%), Positives = 33/62 (52%), Gaps = 10/62 (16%)
Frame = +1
Query: 16 LEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEAD----------DDEDEDDDDEDD 65
+ +++AEE +P+E+ EDV D+D ++++ DD D+DD EDD
Sbjct: 427 IRPLVTAEEEEASSDFEPEENGEEEEEDVDDEDGEKSEAPPKRKRSDKDDSDDDDGGEDD 606
Query: 66 DK 67
D+
Sbjct: 607 DE 612
Score = 35.4 bits (80), Expect(2) = 0.002
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 54 DDEDEDDDDEDDDKEDGALGGSEGSKQSRSEK 85
DD+D+++D+EDDD++D GG + + E+
Sbjct: 211 DDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEE 306
Score = 33.5 bits (75), Expect = 0.081
Identities = 22/79 (27%), Positives = 43/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 34 QEDDAPIVEDVKDDDKDEADDDE-DEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRKAML 92
+E++ ++ D ++D++ E++D+ D+ +DDEDDD + + K+RK +
Sbjct: 98 EENEVTVLVDEEEDEEYESEDEVVDDGEDDEDDD---------DYLLTMTTTMKTRKTTM 250
Query: 93 KLGLKPVTGVSRVTIKRTK 111
K+ L T V+ T+K K
Sbjct: 251 KMMLP--TAVTTTTMKTKK 301
Score = 33.1 bits (74), Expect = 0.11
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 55 DEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKS 87
D+D+D++DE+DD ED A G + E++S
Sbjct: 211 DDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEES 309
Score = 30.4 bits (67), Expect = 0.69
Identities = 21/78 (26%), Positives = 36/78 (45%)
Frame = +1
Query: 8 DASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDEDEDDDDEDDDK 67
D E E E+ E ++ +E++A D + +E ++E+ED DDED +K
Sbjct: 370 DEEDEEEQGEEADLGTEYLIRPLVTAEEEEAS-----SDFEPEENGEEEEEDVDDEDGEK 534
Query: 68 EDGALGGSEGSKQSRSEK 85
+ K+ RS+K
Sbjct: 535 SEAP------PKRKRSDK 570
Score = 22.3 bits (46), Expect(2) = 0.002
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 23 EETTLKKKPQPQEDDAPIVEDVKDDDKDEADDDED 57
EE + +ED+ ED DD ++ +DD+D
Sbjct: 98 EENEVTVLVDEEEDEEYESEDEVVDDGEDDEDDDD 202
>TC204794 similar to UP|Q9LK52 (Q9LK52) Dbj|BAA90629.1, complete
Length = 1037
Score = 42.7 bits (99), Expect = 1e-04
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 36 DDAPIVEDVKDDDKD-EADDDEDEDDDDEDDDKEDGALGGSEGSKQSRSEKKSRK 89
+D + V DD D E D+D DDD++D+D + L E K+ R+E+K RK
Sbjct: 409 EDRIVARSVDADDSDVEVKSDDDSDDDEDDEDDTEALLAELEQIKKERAEEKLRK 573
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.305 0.127 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,099,461
Number of Sequences: 63676
Number of extensions: 70280
Number of successful extensions: 4790
Number of sequences better than 10.0: 392
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2533
length of query: 227
length of database: 12,639,632
effective HSP length: 94
effective length of query: 133
effective length of database: 6,654,088
effective search space: 884993704
effective search space used: 884993704
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0207.3