BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0207.10
(325 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215669 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, part... 178 3e-45
TC207361 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, part... 175 3e-44
TC229564 weakly similar to UP|Q6VSS7 (Q6VSS7) TOX, partial (18%) 172 2e-43
TC232572 weakly similar to UP|HDA1_HUMAN (Q13547) Histone deacet... 169 1e-42
TC229563 146 1e-35
TC225702 UP|Q9ZRD8 (Q9ZRD8) GMFP5 (Fragment), partial (98%) 127 5e-30
TC225703 homologue to UP|Q9ZRD8 (Q9ZRD8) GMFP5 (Fragment), parti... 112 3e-25
TC219297 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, part... 110 7e-25
TC215670 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, part... 103 1e-22
AI899993 86 3e-17
BM525895 82 3e-16
TC209673 weakly similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP... 80 2e-15
CA802758 79 3e-15
BM522567 similar to GP|4097571|gb|A GMFP5 {Glycine max}, partial... 71 8e-13
AW423697 69 4e-12
BM307907 63 2e-10
AW760279 62 3e-10
TC215671 homologue to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, pa... 61 8e-10
AI495750 57 9e-09
BG652519 similar to GP|28416657|gb| At5g60800 {Arabidopsis thali... 57 1e-08
>TC215669 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, partial (54%)
Length = 1305
Score = 178 bits (451), Expect = 3e-45
Identities = 123/352 (34%), Positives = 174/352 (48%), Gaps = 28/352 (7%)
Frame = +2
Query: 1 MGEEAK----QLKKDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEK----KDPKPPSPC 52
MGEE K Q K + +E K E+ EKP EEKK E+ +E+ P PP+
Sbjct: 134 MGEEEKKPEEQPKAEEKKPEEEKKKEEAAAAEKPSEEKKPEQESKEEVAAPPPPPPPAEI 313
Query: 53 VLFVDLHCVGCARKIEKCIMKLRGVERVLIDMAKKEVMIKGI-VEPKAICNIITKKTKRL 111
VL V +HC GCARK+ + + GV+ V+ D +V++KG +P + I +K+ R
Sbjct: 314 VLKVFMHCEGCARKVRRSLKGFPGVDDVVTDCKSHKVVVKGEKADPLKVLERIQRKSHRQ 493
Query: 112 AKVISPLPEAEGE----------PVPEIVNSQVSEPVTVELNVNMHCEACAEQLKGKILK 161
+++SP+P+ + E P PE + +TV L V MHCEAC++++K +I +
Sbjct: 494 VELLSPIPKPQEEKKVQEEEKPKPTPEEKKEEAQIVMTV-LKVGMHCEACSQEIKRRIQR 670
Query: 162 MRGVQTAVAKLSTGKVIVTGTMDANKLVEYVYRRTKKLAKIIPQPEPELELEPEPEPEPE 221
M+GV++A L +V V G D KLVEYVY+RT K A I+ Q EPE +
Sbjct: 671 MKGVESAEPDLQNSQVSVKGVYDPAKLVEYVYKRTGKHAVIVKQ-------EPEKK---- 817
Query: 222 TEPGQKVEDKDTDEKPEEKKVENSEMKEEGGDDKNENKEEKSGEEGEEEEADREVDGDQN 281
EK EE K E E +++ G + ENKE+K E EE D N
Sbjct: 818 -------------EKVEEAKEEKKEEEKKSGGEGEENKEKKEEEAKVEEATTPATTEDTN 958
Query: 282 GMM---------LNIDEGSMKRMMYYYQPLYMVEHIPPPQLFSDENPNACCI 324
++ N M+ Y P Y H PPQ+FSDENPNAC +
Sbjct: 959 KVVPEVKINEYFYNPPRYGMEVYAYPAHPAYF--HSYPPQMFSDENPNACTV 1108
>TC207361 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, partial (53%)
Length = 1127
Score = 175 bits (443), Expect = 3e-44
Identities = 116/334 (34%), Positives = 176/334 (51%), Gaps = 26/334 (7%)
Frame = +1
Query: 17 DEPPKAESKPKEKP---EEEKKGEKSVEEKK--DPKPPSPCVLFVDLHCVGCARKIEKCI 71
+E E+K +EK EE+K+ EK +EKK + P VL V +HC GCARK+ + +
Sbjct: 49 EEEKSQENKVEEKKVEEEEKKEEEKKSDEKKFKEKSAPPEIVLKVFMHCEGCARKVRRSL 228
Query: 72 MKLRGVERVLIDMAKKEVMIKGI-VEPKAICNIITKKTKRLAKVISPLP----------E 120
GVE +L D +V++KG +P + + +K+ R +++SP+P +
Sbjct: 229 KGFPGVEDILTDCKSHKVVVKGEKADPLKVLERVQRKSHRKVELLSPIPKPPAEEAKKPQ 408
Query: 121 AEGEPVPEIVNSQVSEPVTVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIVT 180
E +P PE N Q + +TV L V+MHCEACA+++K +I KM+GV++A L +V V
Sbjct: 409 EEEKPKPE-ENKQEPQVITVVLKVHMHCEACAQEIKRRIEKMKGVESAEPDLKKSEVSVK 585
Query: 181 GTMDANKLVEYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEK 240
G + KLVE+VY+RT K A I+ + EP + E+++ + K E+K
Sbjct: 586 GVFETAKLVEHVYKRTGKHAVIVKE-----------------EPFMREEEEEEEAKEEKK 714
Query: 241 KVENSEMKEEGGDDKNENKEEKSGE-EGEEEEADREVDGDQNGMMLNIDEGSMKRMMYYY 299
E E K E G + E +EK GE E + EE +E + ++ +K+ YYY
Sbjct: 715 AEEEGEKKNEKGSGEGEENKEKKGEGEAKAEEESKE----ETAVL------ELKKSEYYY 864
Query: 300 Q--PLYMVEHIP-------PPQLFSDENPNACCI 324
P Y +E PPQ+FSDENPNAC +
Sbjct: 865 NPPPRYGMEFYASYPGPSYPPQIFSDENPNACSV 966
Score = 32.7 bits (73), Expect = 0.23
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +1
Query: 222 TEPGQKVEDKDTDEKPEEKKVENSEMKEEGGDDKNENKEEKS 263
T GQ+ E+K + K EEKKVE E KEE + +EKS
Sbjct: 34 TPMGQE-EEKSQENKVEEKKVEEEEKKEEEKKSDEKKFKEKS 156
Score = 29.3 bits (64), Expect = 2.5
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 6 KQLKKDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEKKD 45
K+ K A + +EP E + +E+ +EEKK E+ E+K +
Sbjct: 625 KRTGKHAVIVKEEPFMREEEEEEEAKEEKKAEEEGEKKNE 744
>TC229564 weakly similar to UP|Q6VSS7 (Q6VSS7) TOX, partial (18%)
Length = 609
Score = 172 bits (435), Expect = 2e-43
Identities = 94/162 (58%), Positives = 114/162 (70%), Gaps = 5/162 (3%)
Frame = +3
Query: 169 VAKLSTGKVIVTGTMDANKLVEYVYRRTKKLAKIIPQPEPELELEPE-PEPEPETEPGQK 227
+ + STGKV+VTGTMDANKLV+YVYRRTKK AKI+PQPEPE E + E E E E K
Sbjct: 3 MTEFSTGKVLVTGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEKKEESKEAEKPAEEENK 182
Query: 228 VEDKDTDEKPEEKKVENSEMKEEGGDDKNENKEEKSGEEGEEEEADREVDGDQNGMML-- 285
E+K +EKP E+ E EGG+ ENKEEK GEEG+E E + N +++
Sbjct: 183 PEEKKEEEKPPEE--PKKEEGGEGGEGGGENKEEKGGEEGKE-----EAKKEDNVVVVAN 341
Query: 286 NIDEGSMKRMMYYYQ--PLYMVEHIPPPQLFSDENPNACCIS 325
NID+ +KRMMYYYQ PLY++E IPPPQLFSDENPNACCI+
Sbjct: 342 NIDDEGLKRMMYYYQYPPLYVIERIPPPQLFSDENPNACCIT 467
Score = 33.9 bits (76), Expect = 0.10
Identities = 21/49 (42%), Positives = 27/49 (54%), Gaps = 5/49 (10%)
Frame = +3
Query: 6 KQLKKDASVHHDEPP----KAESKPKEKP-EEEKKGEKSVEEKKDPKPP 49
++ KK A + P K ESK EKP EEE K E+ EE+K P+ P
Sbjct: 78 RRTKKQAKIVPQPEPEPEKKEESKEAEKPAEEENKPEEKKEEEKPPEEP 224
Score = 33.9 bits (76), Expect = 0.10
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 4 EAKQLKKDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEK 43
E + KK+ S ++P + E+KP+EK EEEK E+ +E+
Sbjct: 117 EPEPEKKEESKEAEKPAEEENKPEEKKEEEKPPEEPKKEE 236
>TC232572 weakly similar to UP|HDA1_HUMAN (Q13547) Histone deacetylase 1
(HD1), partial (5%)
Length = 674
Score = 169 bits (429), Expect = 1e-42
Identities = 89/130 (68%), Positives = 102/130 (78%), Gaps = 5/130 (3%)
Frame = +1
Query: 1 MGEEAKQLK----KDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEKKD-PKPPSPCVLF 55
MGEEAKQ + +A + KAE KP E+ +EEK EK+ +EKK+ PKPPSPCVLF
Sbjct: 283 MGEEAKQEQVQPVAEAKPEEKKEEKAEEKPAEEKKEEKPEEKTEDEKKEEPKPPSPCVLF 462
Query: 56 VDLHCVGCARKIEKCIMKLRGVERVLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVI 115
VDLHC GCA+KIE+ IMK+RGVE V+IDMAK EV IKGIVEP+AICN ITKKTKR A VI
Sbjct: 463 VDLHCEGCAKKIERYIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICNTITKKTKRRASVI 642
Query: 116 SPLPEAEGEP 125
SPLPEAEGEP
Sbjct: 643 SPLPEAEGEP 672
Score = 57.4 bits (137), Expect = 9e-09
Identities = 37/124 (29%), Positives = 63/124 (49%), Gaps = 4/124 (3%)
Frame = +1
Query: 95 VEPKAICNIITKKTKRLAKVISPLPEAEGEPVPEIVNSQVSE----PVTVELNVNMHCEA 150
V+P A KK ++ + P E + E E + E P L V++HCE
Sbjct: 310 VQPVAEAKPEEKKEEKAEE--KPAEEKKEEKPEEKTEDEKKEEPKPPSPCVLFVDLHCEG 483
Query: 151 CAEQLKGKILKMRGVQTAVAKLSTGKVIVTGTMDANKLVEYVYRRTKKLAKIIPQPEPEL 210
CA++++ I+KMRGV+ V ++ +V + G ++ + + ++TK+ A +I P PE
Sbjct: 484 CAKKIERYIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICNTITKKTKRRASVI-SPLPEA 660
Query: 211 ELEP 214
E EP
Sbjct: 661 EGEP 672
Score = 34.7 bits (78), Expect = 0.061
Identities = 18/53 (33%), Positives = 29/53 (53%)
Frame = +1
Query: 211 ELEPEPEPEPETEPGQKVEDKDTDEKPEEKKVENSEMKEEGGDDKNENKEEKS 263
+++P E +PE + +K E+K +EK EEK E +E D+K E + S
Sbjct: 307 QVQPVAEAKPEEKKEEKAEEKPAEEKKEEKPEEKTE------DEKKEEPKPPS 447
Score = 32.7 bits (73), Expect = 0.23
Identities = 26/78 (33%), Positives = 39/78 (49%), Gaps = 3/78 (3%)
Frame = +1
Query: 234 DEKPEEKKVENSEMKEEGGDDKNENKEEKSGEEGEEEEADREVDGDQNGMMLNID---EG 290
+ KPEEKK E +E K E KEEK E+ E+E+ +E + +L +D EG
Sbjct: 325 EAKPEEKKEEKAEEK-----PAEEKKEEKPEEKTEDEK--KEEPKPPSPCVLFVDLHCEG 483
Query: 291 SMKRMMYYYQPLYMVEHI 308
K++ Y + VE +
Sbjct: 484 CAKKIERYIMKMRGVEGV 537
Score = 30.0 bits (66), Expect = 1.5
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 205 QPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEKKVENSEMKEE 250
Q +P E +PE + E + E +K ++ +EKPEEK E KEE
Sbjct: 307 QVQPVAEAKPEEKKEEKAE--EKPAEEKKEEKPEEK--TEDEKKEE 432
>TC229563
Length = 669
Score = 146 bits (368), Expect = 1e-35
Identities = 84/146 (57%), Positives = 95/146 (64%), Gaps = 2/146 (1%)
Frame = +1
Query: 181 GTMDANKLVEYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEK 240
G MDANKLV+YVYRRTKK AKI+PQPEPE E + E E ET KPEE+
Sbjct: 16 GIMDANKLVDYVYRRTKKQAKIVPQPEPEPEKKEEKPAEEET-------------KPEEE 156
Query: 241 KVENSEMKEEGGDDKNENKEEKSGEEGEEEEADREVDGDQNGMMLNIDEGSMKRMMYYYQ 300
K KEEGG ENKEEK GEE +EEA +E + NID+ +KRMMYYYQ
Sbjct: 157 KPPEEAKKEEGG----ENKEEKGGEE-SKEEAKKEENNVVVVPYNNIDDEGLKRMMYYYQ 321
Query: 301 --PLYMVEHIPPPQLFSDENPNACCI 324
PL ++E IPPPQLFSDENPNACCI
Sbjct: 322 YPPLSVIERIPPPQLFSDENPNACCI 399
Score = 30.0 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 21/38 (54%)
Frame = +1
Query: 14 VHHDEPPKAESKPKEKPEEEKKGEKSVEEKKDPKPPSP 51
V+ +A+ P+ +PE EKK EK EE+ P+ P
Sbjct: 49 VYRRTKKQAKIVPQPEPEPEKKEEKPAEEETKPEEEKP 162
Score = 29.6 bits (65), Expect = 1.9
Identities = 18/44 (40%), Positives = 25/44 (55%), Gaps = 6/44 (13%)
Frame = +1
Query: 6 KQLKKDASV---HHDEPPKAESKPKE---KPEEEKKGEKSVEEK 43
++ KK A + EP K E KP E KPEEEK E++ +E+
Sbjct: 55 RRTKKQAKIVPQPEPEPEKKEEKPAEEETKPEEEKPPEEAKKEE 186
>TC225702 UP|Q9ZRD8 (Q9ZRD8) GMFP5 (Fragment), partial (98%)
Length = 1431
Score = 127 bits (320), Expect = 5e-30
Identities = 98/357 (27%), Positives = 154/357 (42%), Gaps = 45/357 (12%)
Frame = +3
Query: 13 SVHHDEPPKAESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIM 72
S+ E K + K + EKK E+ +K D P P V +DLHC GC +KI++
Sbjct: 57 SIRQKHHQMGEEKEQPKNDTEKKPEEVAPKKDDG--PIPVVYKLDLHCEGCVKKIKRTCR 230
Query: 73 KLRGVERVLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVISPLPE------------ 120
GVE V D++ +V + G ++ + + + I ++TK+ +IS P+
Sbjct: 231 HFEGVETVKADLSSNKVTVTGKMDAEKLRDKIAERTKKKVDIISAPPKKEAAVAEKPPEK 410
Query: 121 -AEGEPVPEIVNSQVSEPVTVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIV 179
AE + E + + TV L + +HC+ C +++ IL+ +GVQ S V V
Sbjct: 411 KAEDKKPEEKKPEEKPKESTVVLKIKLHCDGCIAKIRRIILRFKGVQLVSLDGSKDLVTV 590
Query: 180 TGTMDANKLVEYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEE 239
GTMD +++ Y+ + K+ +++P P+ + + + E E G E
Sbjct: 591 KGTMDVKEMLPYLNEKLKRNVEVVPPPKKD-------DDKKEKEGGG-------GGGGGE 728
Query: 240 KKVENSEMKEEGGDDKNENKEEKSGEEGEEEEADREV-------------DG----DQNG 282
KK E KE+ GD + K+EK G E ++ DG Q
Sbjct: 729 KKEGGGEKKEKEGDGE---KKEKDGAAAAAAEVINKMEYMHRMAPPSFWYDGGHFPGQTS 899
Query: 283 MMLNIDEGSMKRMMYYY---------------QPLYMVEHIPPPQLFSDENPNACCI 324
+ + G +Y P YM H PPPQ+FSDENPNAC I
Sbjct: 900 YAMEVHPGYGASANNHYVEPGYVNQGYPLQPPLPYYMHPHAPPPQMFSDENPNACSI 1070
Score = 61.2 bits (147), Expect = 6e-10
Identities = 38/116 (32%), Positives = 58/116 (49%), Gaps = 7/116 (6%)
Frame = +3
Query: 9 KKDASVHHDEPPKA-------ESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCV 61
KK+A+V P K E KP+EKP+E S VL + LHC
Sbjct: 372 KKEAAVAEKPPEKKAEDKKPEEKKPEEKPKE-----------------STVVLKIKLHCD 500
Query: 62 GCARKIEKCIMKLRGVERVLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVISP 117
GC KI + I++ +GV+ V +D +K V +KG ++ K + + +K KR +V+ P
Sbjct: 501 GCIAKIRRIILRFKGVQLVSLDGSKDLVTVKGTMDVKEMLPYLNEKLKRNVEVVPP 668
>TC225703 homologue to UP|Q9ZRD8 (Q9ZRD8) GMFP5 (Fragment), partial (79%)
Length = 1098
Score = 112 bits (279), Expect = 3e-25
Identities = 67/234 (28%), Positives = 117/234 (49%), Gaps = 14/234 (5%)
Frame = +3
Query: 23 ESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVERVLI 82
E K + K E EKK E++ K P P V +DLHC GC +KI++ +GVE V
Sbjct: 66 EEKEQPKNETEKKPEEAAAAPKKDDGPIPVVYKLDLHCEGCVKKIKRTCRHFQGVETVKA 245
Query: 83 DMAKKEVMIKGIVEPKAICNIITKKTKRLAKVISPLPEAEGEPVPEIVNSQVSEPVTVE- 141
D++ +V + G ++ + + + I ++TK+ +IS P+ E +V E E
Sbjct: 246 DLSSNKVTVTGKLDAEKLRDKIAERTKKKVDIISAPPKKEAAATENPPEKKVEEKKPEEK 425
Query: 142 ------------LNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIVTGTMDANKLV 189
L + +HC+ C +++ I++ +GVQ+ S V V GTMD ++V
Sbjct: 426 KPEEKPKESMVVLKIKLHCDGCIAKIRRIIMRFKGVQSVSLDGSKDLVTVKGTMDVKEMV 605
Query: 190 EYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVE-DKDTDEKPEEKKV 242
Y+ + K+ +++P P+ + + + E E + G+K E +KD + +EK V
Sbjct: 606 SYLNEKLKRNVEVVPPPKKD-----DDKKEKEGDGGEKKEKEKDGGGEKKEKDV 752
Score = 78.2 bits (191), Expect = 5e-15
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Frame = +3
Query: 5 AKQLKKDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEKKDPKPP--SPCVLFVDLHCVG 62
A++ KK + PPK E+ E P E+K EK EEKK + P S VL + LHC G
Sbjct: 312 AERTKKKVDII-SAPPKKEAAATENPPEKKVEEKKPEEKKPEEKPKESMVVLKIKLHCDG 488
Query: 63 CARKIEKCIMKLRGVERVLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVISP 117
C KI + IM+ +GV+ V +D +K V +KG ++ K + + + +K KR +V+ P
Sbjct: 489 CIAKIRRIIMRFKGVQSVSLDGSKDLVTVKGTMDVKEMVSYLNEKLKRNVEVVPP 653
Score = 74.3 bits (181), Expect = 7e-14
Identities = 49/128 (38%), Positives = 68/128 (52%), Gaps = 3/128 (2%)
Frame = +3
Query: 119 PEAEGEPVPEIVNSQVSE---PVTVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTG 175
P+ E E PE + + P+ V +++HCE C +++K +GV+T A LS+
Sbjct: 81 PKNETEKKPEEAAAAPKKDDGPIPVVYKLDLHCEGCVKKIKRTCRHFQGVETVKADLSSN 260
Query: 176 KVIVTGTMDANKLVEYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDE 235
KV VTG +DA KL + + RTKK II P P+ E P P +KVE+K
Sbjct: 261 KVTVTGKLDAEKLRDKIAERTKKKVDIISAP-PKKEAAATENP-----PEKKVEEK---- 410
Query: 236 KPEEKKVE 243
KPEEKK E
Sbjct: 411 KPEEKKPE 434
>TC219297 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, partial (30%)
Length = 792
Score = 110 bits (276), Expect = 7e-25
Identities = 75/210 (35%), Positives = 105/210 (49%), Gaps = 4/210 (1%)
Frame = +1
Query: 119 PEAEGEPVPEIVNSQVSEPVTVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVI 178
PE + EP PE + VTV L V MHCEACA+ ++ +I K++GV++ L +VI
Sbjct: 10 PEIKEEPQPEEKKEEPPPVVTVVLKVRMHCEACAQVIQKRIRKIQGVESVETSLGNDQVI 189
Query: 179 VTGTMDANKLVEYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPE 238
V G +D KLV+YVY+RTKK A I+ + E E K+ +EK E
Sbjct: 190 VKGVIDPAKLVDYVYKRTKKQASIVKEEEK--------------------EKKEEEEKKE 309
Query: 239 EKKVENSEMKEEGGDDKNENKEEKSGEEGEEEEADREVDGDQNGMMLNIDEGSMKRMMYY 298
E+K K E +EEK GE+GEE + ++ KR Y+
Sbjct: 310 EEK-------------KEEKEEEKKGEDGEEVDTKTDI----------------KRSEYW 402
Query: 299 YQPLYM-VEHIPPP---QLFSDENPNACCI 324
PL V+++ P Q+FSDENPNAC +
Sbjct: 403 --PLRSHVDYVDYPYASQIFSDENPNACTV 486
Score = 66.6 bits (161), Expect = 1e-11
Identities = 32/97 (32%), Positives = 57/97 (57%)
Frame = +1
Query: 19 PPKAESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVE 78
P + E K + +PEE+K+ +P P VL V +HC CA+ I+K I K++GVE
Sbjct: 1 PTRPEIKEEPQPEEKKE---------EPPPVVTVVLKVRMHCEACAQVIQKRIRKIQGVE 153
Query: 79 RVLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVI 115
V + +V++KG+++P + + + K+TK+ A ++
Sbjct: 154 SVETSLGNDQVIVKGVIDPAKLVDYVYKRTKKQASIV 264
Score = 32.7 bits (73), Expect = 0.23
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 3 EEAKQLKKDASVHHDEPPKAESKPKEKPEEEKKGE--KSVEEKKDPK 47
++A +K++ +E K E + KE+ EEEKKGE + V+ K D K
Sbjct: 247 KQASIVKEEEKEKKEEEEKKEEEKKEEKEEEKKGEDGEEVDTKTDIK 387
>TC215670 similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, partial (34%)
Length = 809
Score = 103 bits (256), Expect = 1e-22
Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 13/181 (7%)
Frame = +2
Query: 1 MGEEAKQLKKDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEKKDPKPPSP----CVLFV 56
MGEE K + + ++ P+ E+ ++KPE+E K E + P PP P VL V
Sbjct: 128 MGEEEN--KPEEPMAKEKNPEEEATQEKKPEQESKEEVAAAAAAPPPPPPPPPPEIVLKV 301
Query: 57 DLHCVGCARKIEKCIMKLRGVERVLIDMAKKEVMIKG-IVEPKAICNIITKKTKRLAKVI 115
+HC GCARK+ + + GV+ V+ D +V++KG +P + I +K+ R +++
Sbjct: 302 FMHCEGCARKVRRSLKGFPGVDDVVTDCKSHKVVVKGEKADPLKVLERIQRKSHRQVELL 481
Query: 116 SPLP--------EAEGEPVPEIVNSQVSEPVTVELNVNMHCEACAEQLKGKILKMRGVQT 167
SP+P + E +P P + + L V+MHCEAC++++K +I +M+GV++
Sbjct: 482 SPIPKPQEEKKVQEEEKPKPNPEEKKEEPQIVTVLKVHMHCEACSQEIKRRIQRMKGVES 661
Query: 168 A 168
A
Sbjct: 662 A 664
Score = 55.1 bits (131), Expect = 4e-08
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Frame = +2
Query: 106 KKTKRLAKVISPLPEAEGEPVPEIVNSQV-------------SEPVTVELNVNMHCEACA 152
K + +AK +P EA E PE + + P + L V MHCE CA
Sbjct: 146 KPEEPMAKEKNPEEEATQEKKPEQESKEEVAAAAAAPPPPPPPPPPEIVLKVFMHCEGCA 325
Query: 153 EQLKGKILKMRGVQTAVAKLSTGKVIVTG-TMDANKLVEYVYRRTKKLAKII-PQPEPEL 210
+++ + GV V + KV+V G D K++E + R++ + +++ P P+P+
Sbjct: 326 RKVRRSLKGFPGVDDVVTDCKSHKVVVKGEKADPLKVLERIQRKSHRQVELLSPIPKPQE 505
Query: 211 ELEPEPEPEPETEPGQKVED 230
E + + E +P+ P +K E+
Sbjct: 506 EKKVQEEEKPKPNPEEKKEE 565
>AI899993
Length = 411
Score = 85.5 bits (210), Expect = 3e-17
Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Frame = +3
Query: 1 MGEEAKQLKKDASVHHDEPPKAESKPKEKPEE---EKKGEKSVEEKK-DPKPPSPCVLFV 56
MGEEAKQ P AE+KP+EK EE EKK EK EEKK +PKPPSPCVLFV
Sbjct: 210 MGEEAKQ--------EQVQPVAEAKPEEKKEEMAEEKKEEKPEEEKKKEPKPPSPCVLFV 365
Query: 57 DLHCVGCARKIEKCI 71
DLHCVGCA+KIE+ I
Sbjct: 366 DLHCVGCAKKIERYI 410
Score = 28.5 bits (62), Expect = 4.3
Identities = 13/29 (44%), Positives = 19/29 (64%)
Frame = +3
Query: 234 DEKPEEKKVENSEMKEEGGDDKNENKEEK 262
+ KPEEKK E +E K+E ++ + KE K
Sbjct: 252 EAKPEEKKEEMAEEKKEEKPEEEKKKEPK 338
>BM525895
Length = 428
Score = 82.0 bits (201), Expect = 3e-16
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Frame = +2
Query: 1 MGEEAKQLK--KDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDL 58
MGEE K+L+ K+ + +EP K E K +E+ EE K +K E K+ PS VL V +
Sbjct: 17 MGEEEKKLEESKEENKKAEEPKKEEEKKEERKTEESKDDK---ESKEKVAPSEIVLKVFM 187
Query: 59 HCVGCARKIEKCIMKLRGVERVLIDMAKKEVMIKG-IVEPKAICNIITKKTKRLAKVISP 117
HC GCARK+ + + GVE +L D +V++KG +P + + KK+ R +++SP
Sbjct: 188 HCEGCARKVRRSLKGFPGVEDILTDCKSHKVVVKGEKADPLKVLERLQKKSHRKVELLSP 367
Query: 118 LPEAEGE 124
+P+ E
Sbjct: 368 IPKPPTE 388
Score = 48.5 bits (114), Expect = 4e-06
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +2
Query: 137 PVTVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIVTG-TMDANKLVEYVYRR 195
P + L V MHCE CA +++ + GV+ + + KV+V G D K++E + ++
Sbjct: 158 PSEIVLKVFMHCEGCARKVRRSLKGFPGVEDILTDCKSHKVVVKGEKADPLKVLERLQKK 337
Query: 196 T-KKLAKIIPQPEPELELEPEPEPEPE 221
+ +K+ + P P+P E E +P+ E E
Sbjct: 338 SHRKVELLSPIPKPPTEEEKKPQEEQE 418
Score = 29.3 bits (64), Expect = 2.5
Identities = 12/38 (31%), Positives = 24/38 (62%)
Frame = +2
Query: 238 EEKKVENSEMKEEGGDDKNENKEEKSGEEGEEEEADRE 275
EEKK+E S+ + + ++ + +E+K + EE + D+E
Sbjct: 26 EEKKLEESKEENKKAEEPKKEEEKKEERKTEESKDDKE 139
>TC209673 weakly similar to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, partial
(27%)
Length = 650
Score = 79.7 bits (195), Expect = 2e-15
Identities = 46/110 (41%), Positives = 64/110 (57%), Gaps = 4/110 (3%)
Frame = +3
Query: 23 ESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVERVLI 82
E K E +EE K EK EEKK+ +PP VL VD+HC CARK+ K + +GVE V
Sbjct: 258 EEKKDEGNKEEAKEEKKEEEKKE-EPPPEIVLKVDMHCEACARKVAKALKGFQGVEEVSA 434
Query: 83 DMAKKEVMIKG-IVEPKAICNIITKKTKRLAKVISPL---PEAEGEPVPE 128
D +V++KG +P +C + KK+ + ++ISPL PE + EP E
Sbjct: 435 DSRTSKVVVKGKAADPIKVCERLQKKSGKKVELISPLPKPPEEKKEPPKE 584
Score = 57.4 bits (137), Expect = 9e-09
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +3
Query: 109 KRLAKVISPLPEAEGEPVPEIVNSQVSEPVTVELNVNMHCEACAEQLKGKILKMRGVQTA 168
K AK E + EP PEIV L V+MHCEACA ++ + +GV+
Sbjct: 282 KEEAKEEKKEEEKKEEPPPEIV-----------LKVDMHCEACARKVAKALKGFQGVEEV 428
Query: 169 VAKLSTGKVIVTG-TMDANKLVEYVYRRT-KKLAKIIPQPEPELELEPEPEPEPETE 223
A T KV+V G D K+ E + +++ KK+ I P P+P E + P+ EP E
Sbjct: 429 SADSRTSKVVVKGKAADPIKVCERLQKKSGKKVELISPLPKPPEEKKEPPKEEPPKE 599
>CA802758
Length = 411
Score = 79.0 bits (193), Expect = 3e-15
Identities = 41/98 (41%), Positives = 60/98 (60%), Gaps = 1/98 (1%)
Frame = +3
Query: 28 EKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVERVLIDMAKK 87
E EEE+K E++ EEKK+ +PP VL VD+HC CARK+ K + GVE V D
Sbjct: 120 EMGEEEEKKEETTEEKKEKEPPE-IVLKVDMHCEACARKVAKALKGFEGVEEVTADSKAS 296
Query: 88 EVMIKG-IVEPKAICNIITKKTKRLAKVISPLPEAEGE 124
+V++KG +P +C + KK+ + ++ISPLP+ E
Sbjct: 297 KVVVKGKAADPIKVCERLQKKSGKKVELISPLPKPPEE 410
Score = 51.6 bits (122), Expect = 5e-07
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 109 KRLAKVISPLPEAEGEPVPEIVNSQVSEPVTVELNVNMHCEACAEQLKGKILKMRGVQTA 168
+R +I+ + E E + + EP + L V+MHCEACA ++ + GV+
Sbjct: 96 QRSLSIITEMGEEEEKKEETTEEKKEKEPPEIVLKVDMHCEACARKVAKALKGFEGVEEV 275
Query: 169 VAKLSTGKVIVTG-TMDANKLVEYVYRRT-KKLAKIIPQPEPELE 211
A KV+V G D K+ E + +++ KK+ I P P+P E
Sbjct: 276 TADSKASKVVVKGKAADPIKVCERLQKKSGKKVELISPLPKPPEE 410
>BM522567 similar to GP|4097571|gb|A GMFP5 {Glycine max}, partial (33%)
Length = 428
Score = 70.9 bits (172), Expect = 8e-13
Identities = 43/101 (42%), Positives = 58/101 (56%)
Frame = +1
Query: 20 PKAESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVER 79
P+AE +K EE+K +K EEK PK S VL + LHC GC +KI K I+K +GVE
Sbjct: 1 PRAEFARGKKTEEKKSEDKKAEEKA-PKE-STVVLKIRLHCDGCVQKIRKIILKSKGVES 174
Query: 80 VLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVISPLPE 120
V I+ K V +KG ++ K I + K KR +V+ P E
Sbjct: 175 VNIEGGKDLVSVKGTMDVKEIVPYLNDKLKRNVEVVPPKKE 297
Score = 57.0 bits (136), Expect = 1e-08
Identities = 36/129 (27%), Positives = 61/129 (46%)
Frame = +1
Query: 139 TVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIVTGTMDANKLVEYVYRRTKK 198
TV L + +HC+ C ++++ ILK +GV++ + V V GTMD ++V Y+ + K+
Sbjct: 88 TVVLKIRLHCDGCVQKIRKIILKSKGVESVNIEGGKDLVSVKGTMDVKEIVPYLNDKLKR 267
Query: 199 LAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEKKVENSEMKEEGGDDKNEN 258
+++P P+ E G D K E K + GGD K E
Sbjct: 268 NVEVVP---------------PKKEGG--------DNKKENK-------EGGGGDSKKEG 357
Query: 259 KEEKSGEEG 267
+++ GE+G
Sbjct: 358 GKKQEGEDG 384
>AW423697
Length = 417
Score = 68.6 bits (166), Expect = 4e-12
Identities = 53/177 (29%), Positives = 81/177 (44%)
Frame = +1
Query: 148 CEACAEQLKGKILKMRGVQTAVAKLSTGKVIVTGTMDANKLVEYVYRRTKKLAKIIPQPE 207
C ++L I+ GV++ L+ +VIV G +D KLV++VY+RTKK A I+
Sbjct: 55 CRFTQKKLCVVIIVCAGVESVETDLANDQVIVKGVVDPAKLVDHVYKRTKKQASIV---- 222
Query: 208 PELELEPEPEPEPETEPGQKVEDKDTDEKPEEKKVENSEMKEEGGDDKNENKEEKSGEEG 267
KD ++K EEKK E +K E KEE+ +EG
Sbjct: 223 -----------------------KDEEKKEEEKKEE----------EKREEKEEEK-KEG 300
Query: 268 EEEEADREVDGDQNGMMLNIDEGSMKRMMYYYQPLYMVEHIPPPQLFSDENPNACCI 324
EE+ ++ +KR Y+ Y +++ P++FSDENPNAC +
Sbjct: 301 EED-----------------NKTEIKRSEYWPSKNY-IDYAYDPEIFSDENPNACSV 417
Score = 41.2 bits (95), Expect = 6e-04
Identities = 21/69 (30%), Positives = 38/69 (54%)
Frame = +1
Query: 60 CVGCARKIEKCIMKLRGVERVLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVISPLP 119
C +K+ I+ GVE V D+A +V++KG+V+P + + + K+TK+ A ++
Sbjct: 55 CRFTQKKLCVVIIVCAGVESVETDLANDQVIVKGVVDPAKLVDHVYKRTKKQASIVKDEE 234
Query: 120 EAEGEPVPE 128
+ E E E
Sbjct: 235 KKEEEKKEE 261
Score = 31.6 bits (70), Expect = 0.51
Identities = 19/42 (45%), Positives = 24/42 (56%)
Frame = +1
Query: 6 KQLKKDASVHHDEPPKAESKPKEKPEEEKKGEKSVEEKKDPK 47
K+ KK AS+ DE EK EEEKK E+ EEK++ K
Sbjct: 193 KRTKKQASIVKDE---------EKKEEEKKEEEKREEKEEEK 291
>BM307907
Length = 431
Score = 63.2 bits (152), Expect = 2e-10
Identities = 33/105 (31%), Positives = 58/105 (54%)
Frame = +2
Query: 138 VTVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIVTGTMDANKLVEYVYRRTK 197
+TV L V MHC+ CA ++ + +GV+T A GKV VTG +D K+ + + + +
Sbjct: 80 ITVVLKVEMHCDGCASKIIKHLRCFQGVETVKADSDAGKVTVTGKVDPTKVRDNLAEKIR 259
Query: 198 KLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEKKV 242
K +++ P+P+ E E E E + + +K D+K ++K+V
Sbjct: 260 KKVELV-SPQPKKEQENEKENKDAKANNKSENNKTQDKKTKDKEV 391
Score = 54.3 bits (129), Expect = 7e-08
Identities = 29/93 (31%), Positives = 51/93 (54%)
Frame = +2
Query: 32 EEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVERVLIDMAKKEVMI 91
++K G + K++ VL V++HC GCA KI K + +GVE V D +V +
Sbjct: 26 KKKNGGGNGNNKENEDSTITVVLKVEMHCDGCASKIIKHLRCFQGVETVKADSDAGKVTV 205
Query: 92 KGIVEPKAICNIITKKTKRLAKVISPLPEAEGE 124
G V+P + + + +K ++ +++SP P+ E E
Sbjct: 206 TGKVDPTKVRDNLAEKIRKKVELVSPQPKKEQE 304
>AW760279
Length = 370
Score = 62.4 bits (150), Expect = 3e-10
Identities = 37/115 (32%), Positives = 55/115 (47%)
Frame = +2
Query: 128 EIVNSQVSEPVTVELNVNMHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIVTGTMDANK 187
E+ + P+ V +++HCE C +++K GV+T A L + KV VTG MDA K
Sbjct: 2 EVAPKKDDGPIPVVYKLDLHCEGCVKKIKRTCRHFEGVETVKADLLSNKVTVTGKMDAEK 181
Query: 188 LVEYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEKKV 242
L + RTKK I P P+ E +P K ++ + KP+E V
Sbjct: 182 LRY*IAERTKKKVDFISSP-PKNEAVVADKPSENNAEDNKPDEIIPEYKPKEYSV 343
Score = 56.6 bits (135), Expect = 1e-08
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Frame = +2
Query: 40 VEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVERVLIDMAKKEVMIKGIVEPKA 99
V KKD P P V +DLHC GC +KI++ GVE V D+ +V + G ++ +
Sbjct: 5 VAPKKDDGP-IPVVYKLDLHCEGCVKKIKRTCRHFEGVETVKADLLSNKVTVTGKMDAEK 181
Query: 100 ICNIITKKTKRLAKVISPLPE-------------AEGEPVPEIVNSQVSEPVTVELNVNM 146
+ I ++TK+ IS P+ AE EI+ + +V + + +
Sbjct: 182 LRY*IAERTKKKVDFISSPPKNEAVVADKPSENNAEDNKPDEIIPEYKPKEYSVVMKIKL 361
Query: 147 HCE 149
HCE
Sbjct: 362 HCE 370
>TC215671 homologue to UP|Q9FMU9 (Q9FMU9) Similarity to ATFP3, partial (10%)
Length = 538
Score = 60.8 bits (146), Expect = 8e-10
Identities = 52/155 (33%), Positives = 72/155 (45%), Gaps = 20/155 (12%)
Frame = +3
Query: 190 EYVYRRTKKLAKIIPQPEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEKKVENSEMKE 249
EYVY+RT K A I+ Q EPE + EK EE K E EMK
Sbjct: 3 EYVYKRTGKHAVIMKQ-------EPEKK-----------------EKVEEAKEE--EMKS 104
Query: 250 EGGDDKNENKEEKSGEEGEEEEADR----EVDGDQNGMM--LNIDEGSMKRMMYYYQPLY 303
+G ++N+ K+EK +GEE +A+ + D N ++ + I+E +Y P Y
Sbjct: 105 DGEGEENKEKKEKEEAKGEEAKAEEPTTPTITEDTNKVVPEVKINE------YFYNPPRY 266
Query: 304 MVE--------------HIPPPQLFSDENPNACCI 324
+E H PPQ+FSDENPNAC +
Sbjct: 267 GMEVYAYPAHPAHPAYFHSYPPQIFSDENPNACTV 371
>AI495750
Length = 309
Score = 57.4 bits (137), Expect = 9e-09
Identities = 31/91 (34%), Positives = 49/91 (53%)
Frame = +1
Query: 20 PKAESKPKEKPEEEKKGEKSVEEKKDPKPPSPCVLFVDLHCVGCARKIEKCIMKLRGVER 79
P A + P + E K E EE +P CVL V +HC GC RK++K + + GV
Sbjct: 37 PMAATAPATETRVEIK-EPPTEELLEPLMCKSCVLKVSIHCQGCTRKVKKILQSIDGVYC 213
Query: 80 VLIDMAKKEVMIKGIVEPKAICNIITKKTKR 110
ID+ +++V++KG V+ + +T+ KR
Sbjct: 214 TSIDLRQQKVIVKGNVDSDTLIKKLTETGKR 306
Score = 42.4 bits (98), Expect = 3e-04
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Frame = +1
Query: 112 AKVISPLPEAEGEPVPEIVNSQVSEPVTVEL-----------NVNMHCEACAEQLKGKIL 160
A V+S P A P E ++ EP T EL V++HC+ C ++K +
Sbjct: 16 ASVVSVFPMAATAPATE-TRVEIKEPPTEELLEPLMCKSCVLKVSIHCQGCTRKVKKILQ 192
Query: 161 KMRGVQTAVAKLSTGKVIVTGTMDANKLVEYVYRRTKK 198
+ GV L KVIV G +D++ L++ + K+
Sbjct: 193 SIDGVYCTSIDLRQQKVIVKGNVDSDTLIKKLTETGKR 306
>BG652519 similar to GP|28416657|gb| At5g60800 {Arabidopsis thaliana},
partial (24%)
Length = 420
Score = 57.0 bits (136), Expect = 1e-08
Identities = 25/66 (37%), Positives = 41/66 (61%)
Frame = +2
Query: 58 LHCVGCARKIEKCIMKLRGVERVLIDMAKKEVMIKGIVEPKAICNIITKKTKRLAKVISP 117
LHC GC +I K ++K +GV+ + ID K+ V +KG ++ KA+ + +K KR +V+ P
Sbjct: 8 LHCQGCLDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLKRRVEVVPP 187
Query: 118 LPEAEG 123
+ EG
Sbjct: 188 KKDKEG 205
Score = 53.1 bits (126), Expect = 2e-07
Identities = 32/116 (27%), Positives = 52/116 (44%)
Frame = +2
Query: 146 MHCEACAEQLKGKILKMRGVQTAVAKLSTGKVIVTGTMDANKLVEYVYRRTKKLAKIIPQ 205
+HC+ C +++ +LK +GVQ V V GTMD L E + + K+ +++P
Sbjct: 8 LHCQGCLDRIGKTVLKTKGVQEMAIDKEKEMVTVKGTMDVKALAENLMEKLKRRVEVVP- 184
Query: 206 PEPELELEPEPEPEPETEPGQKVEDKDTDEKPEEKKVENSEMKEEGGDDKNENKEE 261
P+ + E G ++K+ K + K GG DKNEN E+
Sbjct: 185 ------------PKKDKEGGGGDDEKEVSGKKKN--------KGGGGGDKNENIED 292
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.308 0.130 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,538,462
Number of Sequences: 63676
Number of extensions: 200269
Number of successful extensions: 3645
Number of sequences better than 10.0: 364
Number of HSP's better than 10.0 without gapping: 2302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3152
length of query: 325
length of database: 12,639,632
effective HSP length: 97
effective length of query: 228
effective length of database: 6,463,060
effective search space: 1473577680
effective search space used: 1473577680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0207.10