BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0195b.8
(83 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC208930 similar to UP|Q7XAC3 (Q7XAC3) Peptide transporter 1, pa... 110 2e-25
TC219570 similar to UP|Q7XAC3 (Q7XAC3) Peptide transporter 1, pa... 109 3e-25
TC230839 similar to PIR|T47573|T47573 peptide transport-like pro... 79 4e-16
TC207109 similar to UP|Q9SZY4 (Q9SZY4) Nitrate transporter, part... 76 3e-15
TC210758 weakly similar to PIR|T47573|T47573 peptide transport-l... 73 3e-14
TC217273 similar to UP|Q8LG02 (Q8LG02) Nitrate transporter, part... 72 5e-14
TC229887 similar to UP|Q9SVS9 (Q9SVS9) Peptide transporter-like ... 71 8e-14
TC219571 similar to UP|Q7XAC3 (Q7XAC3) Peptide transporter 1, pa... 70 1e-13
BE805851 similar to GP|15076661|dbj peptide transporter {Oryza s... 70 2e-13
TC219207 weakly similar to UP|Q9M1I2 (Q9M1I2) Oligopeptide trans... 69 4e-13
TC213873 weakly similar to UP|Q9M331 (Q9M331) Transporter-like p... 67 1e-12
TC233239 weakly similar to UP|O48542 (O48542) Peptide transporte... 67 2e-12
TC230623 UP|Q9FRU2 (Q9FRU2) Nitrate transporter NRT1-5 (Fragment... 60 2e-10
TC234323 55 5e-09
TC218799 similar to UP|Q8W4N9 (Q8W4N9) Nitrate transporter (NTL1... 55 6e-09
BU762646 55 6e-09
TC219714 weakly similar to UP|Q8RX77 (Q8RX77) At1g69870/T17F3_10... 53 3e-08
TC207519 52 5e-08
BM188327 similar to GP|6635838|gb| amino acid/peptide transporte... 52 7e-08
TC206831 similar to UP|Q96400 (Q96400) Nitrite transporter, part... 51 9e-08
>TC208930 similar to UP|Q7XAC3 (Q7XAC3) Peptide transporter 1, partial (35%)
Length = 610
Score = 110 bits (274), Expect = 2e-25
Identities = 53/73 (72%), Positives = 60/73 (81%)
Frame = +3
Query: 9 VSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMM 68
VSD ES+SGDY+NPWRL VTQVEELKI IR+ P+WAT VFSAVY +STL VEQGT+M
Sbjct: 249 VSDYESKSGDYSNPWRLCPVTQVEELKIFIRMFPMWATGAVFSAVYTQMSTLFVEQGTVM 428
Query: 69 NRSFGSFNIPPAS 81
N + GSF IPPAS
Sbjct: 429 NTNIGSFEIPPAS 467
>TC219570 similar to UP|Q7XAC3 (Q7XAC3) Peptide transporter 1, partial (19%)
Length = 505
Score = 109 bits (272), Expect = 3e-25
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = +3
Query: 4 ENIDLVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVE 63
+ + +VSD ES+SGDY+NPWRL TVTQVEELKILI V PIWAT I+F+A YA +STL +E
Sbjct: 177 DRVAIVSDYESKSGDYSNPWRLCTVTQVEELKILICVFPIWATRIIFAAAYAQMSTLFME 356
Query: 64 QGTMMNRSFGSFNIP 78
QGTMMN GSF +P
Sbjct: 357 QGTMMNTCIGSFKLP 401
>TC230839 similar to PIR|T47573|T47573 peptide transport-like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(44%)
Length = 853
Score = 79.0 bits (193), Expect = 4e-16
Identities = 39/63 (61%), Positives = 47/63 (73%), Gaps = 2/63 (3%)
Frame = +3
Query: 21 NPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFG--SFNIP 78
NPWRL TVTQVEELK ++R+LP+WAT I+FS VY +STL V QG M+ G +F IP
Sbjct: 87 NPWRLCTVTQVEELKSILRLLPVWATGIIFSTVYGQMSTLFVLQGQTMDTRVGNSTFKIP 266
Query: 79 PAS 81
PAS
Sbjct: 267 PAS 275
>TC207109 similar to UP|Q9SZY4 (Q9SZY4) Nitrate transporter, partial (61%)
Length = 1416
Score = 75.9 bits (185), Expect = 3e-15
Identities = 33/65 (50%), Positives = 47/65 (71%)
Frame = +2
Query: 17 GDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFN 76
G NPW+L ++T+VEE+K+++R+LP+WAT I+F +YA L T VEQ + M R+ GSF
Sbjct: 323 GSGPNPWKLCSLTRVEEVKMMVRLLPVWATTIIFWTIYAQLITFSVEQASTMERNIGSFQ 502
Query: 77 IPPAS 81
IP S
Sbjct: 503 IPAGS 517
>TC210758 weakly similar to PIR|T47573|T47573 peptide transport-like protein
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(49%)
Length = 1064
Score = 72.8 bits (177), Expect = 3e-14
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = +3
Query: 18 DYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGS--F 75
D NPWRL TVTQVEELK +IR+LPIWAT I+FS VY+ + + + QG MN G+
Sbjct: 117 DPVNPWRLCTVTQVEELKAIIRLLPIWATGIIFSTVYSQMGSYFILQGDTMNNRVGNIKL 296
Query: 76 NIPPAS 81
+I PA+
Sbjct: 297 HISPAT 314
>TC217273 similar to UP|Q8LG02 (Q8LG02) Nitrate transporter, partial (42%)
Length = 1148
Score = 72.0 bits (175), Expect = 5e-14
Identities = 31/74 (41%), Positives = 52/74 (69%)
Frame = +2
Query: 8 LVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTM 67
++ ++ S+ + NPW + TVTQVEE+K+++++LPIW+T I+F +Y+ ++T +EQ T
Sbjct: 113 ILDENCSKDENKENPWIVSTVTQVEEVKMVLKLLPIWSTCILFWTIYSQMNTFTIEQATF 292
Query: 68 MNRSFGSFNIPPAS 81
MNR GS +P S
Sbjct: 293 MNRKVGSLVVPAGS 334
>TC229887 similar to UP|Q9SVS9 (Q9SVS9) Peptide transporter-like protein,
partial (60%)
Length = 1414
Score = 71.2 bits (173), Expect = 8e-14
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +1
Query: 21 NPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFNIPPA 80
+PW L TVTQVEE+K ++R+LPIW I++S V+A +++L VEQG M+ F+IPPA
Sbjct: 490 SPWYLSTVTQVEEVKCILRLLPIWLCTILYSVVFAQMASLFVEQGDAMDTRISRFHIPPA 669
Query: 81 S 81
S
Sbjct: 670 S 672
>TC219571 similar to UP|Q7XAC3 (Q7XAC3) Peptide transporter 1, partial (27%)
Length = 697
Score = 70.5 bits (171), Expect = 1e-13
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = +2
Query: 30 QVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFNIP 78
+VEELKILI V PIWAT I+F+AVYA +STL +EQGTMMN GSF +P
Sbjct: 170 RVEELKILICVFPIWATRIIFAAVYAQMSTLFMEQGTMMNTCIGSF*LP 316
>BE805851 similar to GP|15076661|dbj peptide transporter {Oryza sativa
(japonica cultivar-group)}, partial (11%)
Length = 422
Score = 70.1 bits (170), Expect = 2e-13
Identities = 34/48 (70%), Positives = 39/48 (80%)
Frame = +1
Query: 31 VEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFNIP 78
VEELKILI V PIWAT I+F+AVYA +STL +EQGTMMN GSF +P
Sbjct: 199 VEELKILICVFPIWATRIIFAAVYAQMSTLFMEQGTMMNTCIGSF*LP 342
>TC219207 weakly similar to UP|Q9M1I2 (Q9M1I2) Oligopeptide transporter-like
protein, partial (43%)
Length = 1120
Score = 68.9 bits (167), Expect = 4e-13
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +1
Query: 11 DSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNR 70
D+ES++ D PWRL ++TQVEE+K+++R++PIW + ++F+ V + + T ++QG M R
Sbjct: 34 DAESKTRD---PWRLCSLTQVEEVKLVLRLIPIWLSCLMFTVVQSQVHTFFIKQGATMER 204
Query: 71 SFG-SFNIPPASCE 83
S G F +PPAS +
Sbjct: 205 SIGPHFQVPPASLQ 246
>TC213873 weakly similar to UP|Q9M331 (Q9M331) Transporter-like protein,
partial (20%)
Length = 489
Score = 67.4 bits (163), Expect = 1e-12
Identities = 31/75 (41%), Positives = 48/75 (63%), Gaps = 2/75 (2%)
Frame = +3
Query: 9 VSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMM 68
+ ++E + +PWRL TVT+VEELK++I ++PIW + F + ST ++QG +M
Sbjct: 210 IIENEGNIAEKQSPWRLATVTKVEELKLIINMIPIWVFTLPFGICASQTSTFFIKQGAIM 389
Query: 69 NRSFGS--FNIPPAS 81
NR G+ F +PPAS
Sbjct: 390 NRKIGNNGFVVPPAS 434
>TC233239 weakly similar to UP|O48542 (O48542) Peptide transporter, partial
(16%)
Length = 829
Score = 66.6 bits (161), Expect = 2e-12
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 20 ANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGS-FNIP 78
+N WR+ TVTQVEE K IRVLP+WA+ I S YA LST + Q +M+R+ G+ F IP
Sbjct: 14 SNRWRICTVTQVEEFKSFIRVLPVWASTIALSVSYAQLSTFFLSQANIMDRTLGTHFKIP 193
Query: 79 PAS 81
S
Sbjct: 194AGS 202
>TC230623 UP|Q9FRU2 (Q9FRU2) Nitrate transporter NRT1-5 (Fragment), complete
Length = 1873
Score = 60.1 bits (144), Expect = 2e-10
Identities = 33/73 (45%), Positives = 41/73 (55%), Gaps = 2/73 (2%)
Frame = +3
Query: 11 DSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNR 70
D G A+PW L ++ QVEE K ++RVLPIW IV+ V + TLLV Q +R
Sbjct: 870 DKIKPDGSAADPWNLCSIQQVEEAKCVVRVLPIWFAAIVYHLVIVQMHTLLVFQALQSDR 1049
Query: 71 SFGS--FNIPPAS 81
GS F IP AS
Sbjct: 1050RLGSSNFKIPGAS 1088
>TC234323
Length = 616
Score = 55.5 bits (132), Expect = 5e-09
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = -1
Query: 17 GDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFN 76
G NPW L TV QVEELK LI+++PIW T I+ + S L++E +M +F
Sbjct: 571 GXXLNPWNLCTVDQVEELKALIKIVPIWTTGIMMGVSISQGSFLVLEASSMDRHITSNFE 392
Query: 77 IPPAS 81
IP S
Sbjct: 391 IPSGS 377
>TC218799 similar to UP|Q8W4N9 (Q8W4N9) Nitrate transporter (NTL1), partial
(41%)
Length = 1012
Score = 55.1 bits (131), Expect = 6e-09
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 27 TVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFNIPPAS 81
TV QVE++KI+++VLPI+A I+ + A LST VEQ M+ GS +PPAS
Sbjct: 151 TVEQVEDVKIVLKVLPIFACTIMLNCCLAQLSTFSVEQAATMDTKLGSLKVPPAS 315
>BU762646
Length = 429
Score = 55.1 bits (131), Expect = 6e-09
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 8 LVSDSESRS-GDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGT 66
L++D + +S G PWRL TV QVE+ K +I +LP+W+T I S + ++ V Q
Sbjct: 64 LITDGDLQSDGSIEKPWRLCTVQQVEDFKAIIGILPLWSTSIFLSTPIGIQGSMTVLQAL 243
Query: 67 MMNRSFG-SFNIPPAS 81
M+R G F P S
Sbjct: 244 AMDRQIGPHFKFPAGS 291
>TC219714 weakly similar to UP|Q8RX77 (Q8RX77) At1g69870/T17F3_10, partial
(38%)
Length = 959
Score = 52.8 bits (125), Expect = 3e-08
Identities = 28/66 (42%), Positives = 35/66 (52%), Gaps = 1/66 (1%)
Frame = +2
Query: 17 GDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGS-F 75
G N WRL ++ QVEE+K L R++PIWA I+ T V Q MNR G+ F
Sbjct: 53 GTRVNQWRLVSIQQVEEVKCLARIIPIWAAGILSLISMTQQGTFTVSQAMKMNRHLGAKF 232
Query: 76 NIPPAS 81
IP S
Sbjct: 233 QIPAGS 250
>TC207519
Length = 1557
Score = 52.0 bits (123), Expect = 5e-08
Identities = 29/66 (43%), Positives = 40/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 17 GDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGS-F 75
G +NPW+L TV QVEELK +I+V+P+W+T I+ S LL Q ++R S F
Sbjct: 395 GSASNPWKLCTVDQVEELKAIIKVIPLWSTGIMMSVNIGGSFGLL--QAKSLDRHITSHF 568
Query: 76 NIPPAS 81
+PP S
Sbjct: 569 QVPPGS 586
>BM188327 similar to GP|6635838|gb| amino acid/peptide transporter {Prunus
dulcis}, partial (27%)
Length = 460
Score = 51.6 bits (122), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3
Query: 8 LVSDSESRSGDYANPWRLFTVTQVEELK 35
+VSD ES+SGDY+NPWRL TVTQVEELK
Sbjct: 372 IVSDYESKSGDYSNPWRLCTVTQVEELK 455
>TC206831 similar to UP|Q96400 (Q96400) Nitrite transporter, partial (68%)
Length = 1500
Score = 51.2 bits (121), Expect = 9e-08
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 23 WRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFG-SFNIPPAS 81
W+L TV +VEELK +IR+LPIWA+ I+ + L + +++Q M+R SF I PAS
Sbjct: 511 WKLATVHRVEELKSIIRMLPIWASGILLITSSSHLHSFVIQQARTMDRHLSPSFQISPAS 690
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,473,291
Number of Sequences: 63676
Number of extensions: 33874
Number of successful extensions: 183
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of query: 83
length of database: 12,639,632
effective HSP length: 59
effective length of query: 24
effective length of database: 8,882,748
effective search space: 213185952
effective search space used: 213185952
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)
Lotus: description of TM0195b.8