TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0176a.13
         (515 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC216218 homologue to UP|Q9M7P3 (Q9M7P3) GTP-binding protein, co...    63  3e-10
BU763770 homologue to GP|2345150|gb| developmentally regulated G...    54  2e-07
TC216927 homologue to UP|Q9SVA6 (Q9SVA6) GTP-binding-like protei...    53  3e-07
CD409286                                                               46  4e-05
TC218038 similar to UP|Q9FJM0 (Q9FJM0) GTP binding protein-like,...    44  2e-04
TC217600 homologue to UP|NOG1_ARATH (Q9C6I8) Probable nucleolar ...    43  4e-04
TC223597 homologue to UP|Q9SGT3 (Q9SGT3) T6H22.14 protein, parti...    37  0.028
BQ627620 similar to GP|10176988|db GTP-binding protein-like {Ara...    36  0.047
TC227866 similar to UP|P2B1_DROME (P48456) Serine/threonine prot...    35  0.062
TC233430 similar to UP|Q9LU19 (Q9LU19) Gb|AAB63649.1, partial (4%)     32  0.52
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr...    32  0.52
TC229177 weakly similar to UP|Q21086 (Q21086) C. elegans NST-1 p...    32  0.89
TC205189 similar to UP|Q94G86 (Q94G86) Beta-1,3-glucanase-like p...    31  1.5
TC229893 UP|Q8H928 (Q8H928) Phosphoenolpyruvate carboxylase  , c...    30  2.0
TC206123 weakly similar to UP|DENR_YEAST (P47089) Density-regula...    30  2.0
BM954806                                                               30  2.6
TC204233 homologue to UP|SARA_ARATH (O04834) GTP-binding protein...    30  2.6
TC204226 homologue to UP|SARA_ARATH (O04834) GTP-binding protein...    30  2.6
TC207778 similar to UP|Q9SJF1 (Q9SJF1) T27G7.9, partial (41%)          30  2.6
TC205090 similar to UP|O04237 (O04237) Transcription factor, par...    30  3.4

>TC216218 homologue to UP|Q9M7P3 (Q9M7P3) GTP-binding protein, complete
          Length = 1545

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
 Frame = +3

Query: 316 SENVLILELKSIADVSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNFDDFS 375
           +E  ++    S   +  VG+PN GKSTL   +++      ++ F T+ PN   +N  D  
Sbjct: 108 AERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNVPDER 287

Query: 376 -----------------ITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVV---DLA 415
                            + + DI GL++GAHQ +GLG++FL HI     + +V+   +  
Sbjct: 288 FEWLCQLFKPKSEVSAFLEIHDIAGLVRGAHQGQGLGNSFLSHIRAVDGIFHVLRAFEDP 467

Query: 416 AALHGRKGIPPWEQLKDLILELEYHQDGLSNRPSLIVANKIDEEGADEVYLELQRRVHGV 475
             +H    + P   L+ +  EL         R    +   +      ++ +EL+      
Sbjct: 468 DIIHVDDTVDPVRDLEVITEELRLKDIEFMERKIEDIEKSMKRSNDKQLKIELE------ 629

Query: 476 PIFRVCAVLEEG 487
              RV A+LEEG
Sbjct: 630 CCQRVKALLEEG 665


>BU763770 homologue to GP|2345150|gb| developmentally regulated GTP binding
           protein {Arabidopsis thaliana}, partial (33%)
          Length = 449

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 25/66 (37%), Positives = 40/66 (59%)
 Frame = +3

Query: 330 VSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNFDDFSITVADIPGLIKGAH 389
           V+ +G P+ GKSTLL  ++        Y FTTL    G ++++D  I + D+PG+I+GA 
Sbjct: 243 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 422

Query: 390 QNRGLG 395
           + +G G
Sbjct: 423 EGKGRG 440


>TC216927 homologue to UP|Q9SVA6 (Q9SVA6) GTP-binding-like protein, complete
          Length = 1771

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 38/131 (29%), Positives = 56/131 (42%)
 Frame = +2

Query: 330 VSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNFDDFSITVADIPGLIKGAH 389
           V  VG P+ GKSTLL  ++     V  Y FTTL    G + +    I + D+PG+I+GA 
Sbjct: 407 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAK 586

Query: 390 QNRGLGHAFLRHIERTKVLAYVVDLAAALHGRKGIPPWEQLKDLILELEYHQDGLSNRPS 449
             +G G   +        +  V+D          I P    + +  ELE     L+  P 
Sbjct: 587 DGKGRGRQVISTARTCNCILIVLD---------AIKPITHKRLIEKELEGFGIRLNKEPP 739

Query: 450 LIVANKIDEEG 460
            +   K D+ G
Sbjct: 740 NLTFRKKDKGG 772


>CD409286 
          Length = 432

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +3

Query: 82  GGNGGRGGDVILECSPRVWDFSGLQH--HLIAGKGGPGSSKNKIGTRGADKVVHVPVGT 138
           GG+GGRGGDV +E    +      ++  H  AG+GG G    + G +G D VV VP GT
Sbjct: 255 GGDGGRGGDVYVEVDGAMNTLLPFRNSVHFRAGRGGHGQGSMQSGAKGEDLVVKVPPGT 431


>TC218038 similar to UP|Q9FJM0 (Q9FJM0) GTP binding protein-like, partial
           (62%)
          Length = 1529

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 44/154 (28%), Positives = 73/154 (46%), Gaps = 9/154 (5%)
 Frame = +3

Query: 327 IADVSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNL---NFDDFSIT-----V 378
           +A VS VG  NAGKSTLL  ++ A        F TL P    +   N  +F +T     +
Sbjct: 375 VAVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFI 554

Query: 379 ADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALHGRKGIPPWEQLKDLILELE 438
             +P  +  A +      A L  I  + +L +VVD++  L  ++       +  ++ EL+
Sbjct: 555 QKLPTTLVAAFR------ATLEEISESSLLVHVVDISHPLAEQQ----INAVDKVLSELD 704

Query: 439 YHQDGLSNRPSLIVANKIDE-EGADEVYLELQRR 471
                +S+ P LIV NK+D+     ++ LE ++R
Sbjct: 705 -----VSSIPKLIVWNKVDKVSDPQKLRLEAEKR 791


>TC217600 homologue to UP|NOG1_ARATH (Q9C6I8) Probable nucleolar GTP-binding
           protein 1, partial (31%)
          Length = 630

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 30/102 (29%), Positives = 45/102 (43%)
 Frame = +2

Query: 293 RQHISNLEDSDSVCSSLNAGMPGSENVLILELKSIADVSFVGMPNAGKSTLLGAISRAKP 352
           RQH++ L   D          P +  VLI            G PN GKS+ +  I+RA  
Sbjct: 266 RQHMARLPSID----------PNTRTVLIC-----------GYPNVGKSSFINKITRADV 382

Query: 353 AVGHYAFTTLRPNLGNLNFDDFSITVADIPGLIKGAHQNRGL 394
            V  YAFTT    +G+ ++      V D PG++    ++R +
Sbjct: 383 DVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNI 508


>TC223597 homologue to UP|Q9SGT3 (Q9SGT3) T6H22.14 protein, partial (19%)
          Length = 441

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 333 VGMPNAGKSTLLGA-ISRAKPAVGHYAFTTLRPNLGNLNFDDFSITV 378
           VG+PN GKSTL  A +   K    ++ F T+ PN+G +   D  + V
Sbjct: 241 VGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLHV 381


>BQ627620 similar to GP|10176988|db GTP-binding protein-like {Arabidopsis
           thaliana}, partial (21%)
          Length = 431

 Score = 35.8 bits (81), Expect = 0.047
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
 Frame = +1

Query: 330 VSFVGMPNAGKSTLLGA-ISRAKPAVGHYAFTTLRPNLGNLNFDDFSITVADIPGLIKGA 388
           ++ VG PN GKSTLL A +   +  VG  A  T         F   +I + D  G ++  
Sbjct: 127 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSIRTQFEFQGRTIYLVDTAGWLQRT 306

Query: 389 HQNRGLGHAFL----RHIERTKVLAYVVDLAAALHGRKGI 424
            Q +G     +    + + R  ++A V+D    ++ R+ +
Sbjct: 307 KQEKGAASLSIMQSRKSLLRAHIIALVLDAEEIINARRSM 426


>TC227866 similar to UP|P2B1_DROME (P48456) Serine/threonine protein
           phosphatase 2B catalytic subunit 1
           (Calmodulin-dependent calcineurin A1 subunit) , partial
           (3%)
          Length = 1013

 Score = 35.4 bits (80), Expect = 0.062
 Identities = 20/65 (30%), Positives = 27/65 (40%)
 Frame = +3

Query: 58  KAGDGGSGCSSFHRSRHDRQGRADGGNGGRGGDVILECSPRVWDFSGLQHHLIAGKGGPG 117
           KAG GG    +      + +G+ DGG GG GG    +     +DF         GK G G
Sbjct: 102 KAGGGGGSADTATNKNKNNKGKKDGGGGGGGGGKFDKID---FDFQDFDIPPTKGKNGKG 272

Query: 118 SSKNK 122
            +  K
Sbjct: 273 GNNGK 287


>TC233430 similar to UP|Q9LU19 (Q9LU19) Gb|AAB63649.1, partial (4%)
          Length = 689

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 29/147 (19%), Positives = 61/147 (40%), Gaps = 18/147 (12%)
 Frame = +2

Query: 137 GTVIHLVNGD-IPSIVKTESSADTDPWEISGALVDDLPD----------HGNGSISNATN 185
           G V+ L+ G+ + S + +E +  TD      A V +LPD          HG G  + + N
Sbjct: 263 GQVLGLLGGNQLNSAINSEKAVKTD-----SAAVAELPDLIDTGDLNDYHGTGDNTKSKN 427

Query: 186 GEEVKTIHPT--GCSSSQAAEKNVEKSVKSGHVASTDVLSQLSISNGTPK-----FGTEY 238
           G+ +  + P+     +    E  +   V S  + + D  + +S  +   K     F +  
Sbjct: 428 GQNIANLTPSTPPALADDLFENFMNSGVASDELKNDDPFADVSFHSNDNKEHADIFSSMT 607

Query: 239 IGEEQEEQEILYNVAELTEEGQQMIVA 265
           +G+++ +  + + +    E     ++A
Sbjct: 608 VGDDKLDHHVSHGLGNRNEPDSDDLLA 688


>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
           precursor, partial (11%)
          Length = 678

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -3

Query: 57  AKAGDGGSGCSSFHRSRHDRQG---RADGGNGGRGGDVILECSPRVWDFSGLQHHLIAGK 113
           A  G+GG G S     R   +G   +  GG+GG+GG              G+   +  GK
Sbjct: 418 ASGGNGGGGASGGGDGRFGGEGDGGKGGGGDGGKGG--------------GVDSGIGGGK 281

Query: 114 GGPGSSKNKIGTRGAD 129
           GG G   N  G  G +
Sbjct: 280 GGGGDGGNGGGGDGGN 233


>TC229177 weakly similar to UP|Q21086 (Q21086) C. elegans NST-1 protein
           (Corresponding sequence K01C8.9), partial (21%)
          Length = 1353

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 20/77 (25%), Positives = 37/77 (47%)
 Frame = +2

Query: 323 ELKSIADVSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNFDDFSITVADIP 382
           E+K    V  +G+PN GKS+L+ ++ R+   V   +   L  ++  +  D  ++ + D P
Sbjct: 182 EIKKSITVGLIGLPNVGKSSLINSLKRSH-VVNVGSTPGLTRSMQEVQLDK-NVKLLDCP 355

Query: 383 GLIKGAHQNRGLGHAFL 399
           G++    Q      A L
Sbjct: 356 GVVMLKSQENDASVALL 406


>TC205189 similar to UP|Q94G86 (Q94G86) Beta-1,3-glucanase-like protein,
           partial (91%)
          Length = 1715

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
 Frame = +1

Query: 122 KIGTRGADKVV-----HVPVGTVIHLVNGDIPSIVKTESSADTDPWEISGALVDDLPDHG 176
           K+   GAD  +     +  +G VI   NGDIPS+    ++A    W  +      LP + 
Sbjct: 289 KVRLYGADPAIIKALANSGIGIVIGAANGDIPSLAADPNAA--TQWVNANV----LPYYP 450

Query: 177 NGSISNATNGEEVKTIHPTGCSSSQA-AEKNVEKSV 211
             +I+  T G E+ T+   G  S    A +NV+ ++
Sbjct: 451 ASNITLITVGNEILTLADQGLKSQLVPAMRNVQNAL 558


>TC229893 UP|Q8H928 (Q8H928) Phosphoenolpyruvate carboxylase  , complete
          Length = 3536

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = -3

Query: 440  HQDGLSNRPSLIVANKIDEEGADEVYLELQRRVHGVPIFRVCAVLE 485
            H+D   + P L++ANK  ++  +  Y E+Q+RV  V +  + +VL+
Sbjct: 3450 HRDSTKHSPDLMMANKTKQDLLERRYKEVQKRV-VVAVLSIISVLK 3316


>TC206123 weakly similar to UP|DENR_YEAST (P47089) Density-regulated protein
           homolog, partial (18%)
          Length = 1053

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 32/125 (25%), Positives = 54/125 (42%), Gaps = 18/125 (14%)
 Frame = +3

Query: 148 PSIVKTESSAD--TDPWEISGALVDDLPDHGNGSISNATNGEEVKTIHPTGCSSSQAAEK 205
           P ++K E  AD   D  + +G     +   G+G+ S+A   EEVK +           E 
Sbjct: 240 PDLLKEEKEADKVADKLQSTG-----ISGAGDGAASSAPKQEEVKRLPGGKIKKKDKQEV 404

Query: 206 NVEKSVKSGHVASTDV----LSQLSISNGTPKFGTEYI-------GEEQEEQ-----EIL 249
            +EK V++     T V    L  + +S+ + K G ++        G  ++EQ     +I 
Sbjct: 405 VIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIA 584

Query: 250 YNVAE 254
           Y+V E
Sbjct: 585 YDVVE 599


>BM954806 
          Length = 420

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 148 PSIVKTESSADTDPWEISGALVDDLPDHGNGSISNATN--GEEVKTIHPTGCSSSQAAEK 205
           P+ +K ESSA+TD  +I+    ++LP    G +   TN   ++ +    +  ++  A EK
Sbjct: 205 PTCLKNESSAETDTMDINALHKNNLP----GDVPLQTNKCSKDSQNSRTSQGATISAREK 372

Query: 206 NVEKSVKS 213
            + KSV +
Sbjct: 373 TIAKSVNT 396


>TC204233 homologue to UP|SARA_ARATH (O04834) GTP-binding protein SAR1A,
           complete
          Length = 991

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 33/133 (24%), Positives = 59/133 (43%), Gaps = 3/133 (2%)
 Frame = +3

Query: 328 ADVSFVGMPNAGKSTLLGAISRAKPAVGHYAF---TTLRPNLGNLNFDDFSITVADIPGL 384
           A + F+G+ NAGK+TLL  + + +  V H      T+   ++G + F  F +        
Sbjct: 201 AKILFLGLDNAGKTTLLHML-KDERLVQHQPTQHPTSEELSIGKIKFKAFDL-------- 353

Query: 385 IKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALHGRKGIPPWEQLKDLILELEYHQDGL 444
             G HQ       +  +  +   + Y+VD   A    +     ++L  L+ +     + L
Sbjct: 354 --GGHQ--VARRVWKDYYAKVDAVVYLVD---AFDKERFAESKKELDALLSD-----ESL 497

Query: 445 SNRPSLIVANKID 457
           +N P L++ NKID
Sbjct: 498 ANVPFLVLGNKID 536


>TC204226 homologue to UP|SARA_ARATH (O04834) GTP-binding protein SAR1A,
           complete
          Length = 1062

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 33/133 (24%), Positives = 59/133 (43%), Gaps = 3/133 (2%)
 Frame = +3

Query: 328 ADVSFVGMPNAGKSTLLGAISRAKPAVGHYAF---TTLRPNLGNLNFDDFSITVADIPGL 384
           A + F+G+ NAGK+TLL  + + +  V H      T+   ++G + F  F +        
Sbjct: 294 AKILFLGLDNAGKTTLLHML-KDERLVQHQPTQHPTSEELSIGKIKFKAFDL-------- 446

Query: 385 IKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALHGRKGIPPWEQLKDLILELEYHQDGL 444
             G HQ       +  +  +   + Y+VD   A    +     ++L  L+ +     + L
Sbjct: 447 --GGHQ--VARRVWKDYYAKVDAVVYLVD---AFDKERFAESKKELDALLSD-----ESL 590

Query: 445 SNRPSLIVANKID 457
           +N P L++ NKID
Sbjct: 591 ANVPFLVLGNKID 629


>TC207778 similar to UP|Q9SJF1 (Q9SJF1) T27G7.9, partial (41%)
          Length = 1511

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 24/75 (32%), Positives = 33/75 (44%)
 Frame = +1

Query: 311 AGMPGSENVLILELKSIADVSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLN 370
           AG   S NV+         V FVG PN GKS+ + A+   K   G  +      +   L 
Sbjct: 289 AGSSSSSNVI---------VGFVGYPNVGKSSTINALVGQK-RTGVTSTPGKTKHFQTLI 438

Query: 371 FDDFSITVADIPGLI 385
             D  +T+ D PGL+
Sbjct: 439 ISD-ELTLCDCPGLV 480


>TC205090 similar to UP|O04237 (O04237) Transcription factor, partial (36%)
          Length = 614

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 25/79 (31%), Positives = 31/79 (38%), Gaps = 7/79 (8%)
 Frame = +2

Query: 61  DGGSGCSSFHRSRHDRQGRADGGNGGR---GGDVILECSPRVWDFSGLQHHLIAGKGG-- 115
           +G SG  S  R     +G   GG GGR   GG  I E           +HH   G+G   
Sbjct: 179 EGDSGNHSERRGYGGPRGPYRGGGGGRGRRGGFTIGEVGEEGRPRRAFEHHSGTGRGNEF 358

Query: 116 --PGSSKNKIGTRGADKVV 132
              GS +   GT+  D  V
Sbjct: 359 KRDGSGRGNWGTQNDDIAV 415


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.315    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,589,377
Number of Sequences: 63676
Number of extensions: 272451
Number of successful extensions: 1094
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of query: 515
length of database: 12,639,632
effective HSP length: 101
effective length of query: 414
effective length of database: 6,208,356
effective search space: 2570259384
effective search space used: 2570259384
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)