BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0176a.11
(597 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC232778 similar to UP|Q9LNG5 (Q9LNG5) F21D18.16, partial (5%) 89 7e-18
TC211858 45 8e-14
BI470376 weakly similar to GP|14090338|dbj P0638D12.5 {Oryza sat... 71 2e-12
BQ576456 62 7e-10
AI495080 59 6e-09
TC214082 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, p... 59 6e-09
CO979307 59 6e-09
TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, p... 56 4e-08
TC211545 weakly similar to UP|Q7XHQ1 (Q7XHQ1) Calcineurin-like p... 52 1e-06
TC214230 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, p... 49 5e-06
TC214265 UP|PRP3_SOYBN (P15642) Repetitive proline-rich cell wal... 46 5e-05
TC204103 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, p... 45 1e-04
BG839790 similar to PIR|D96521|D96 protein F21D18.16 [imported] ... 39 2e-04
TC203287 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment... 44 3e-04
BG790175 similar to PIR|T09854|T098 proline-rich cell wall prote... 43 3e-04
TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein pr... 43 3e-04
TC218095 42 6e-04
TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall pr... 42 8e-04
TC220238 UP|Q84VH5 (Q84VH5) Envelope-like protein (Fragment), co... 42 0.001
TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pr... 41 0.001
>TC232778 similar to UP|Q9LNG5 (Q9LNG5) F21D18.16, partial (5%)
Length = 746
Score = 88.6 bits (218), Expect = 7e-18
Identities = 70/252 (27%), Positives = 117/252 (45%), Gaps = 7/252 (2%)
Frame = -1
Query: 172 PVELSLLQHYPDHIAPWTWHTLLGTTDPRYSERGDLRLATAGTKLGLMTCEGDNY--REV 229
PV+ +L P H+ W+ G D + R + T +G+ E+
Sbjct: 689 PVDGDVLWM*PKHVLEHVWN---GELDRKLHIRR-----------AVPTYQGEKQISEEI 552
Query: 230 RLIVERSGLYPLVRCSYVETDPGLISALVERWHEETSSFHMPFGEMTVTLDDVSALLHIP 289
++ + G Y +++ Y++ + LISA +ERW ET +FH+ GE T+TL DV LL +
Sbjct: 551 VPLLRQCGFYWIMKMGYLKINAALISAFIERWRPETHTFHLRCGEATITLQDVLILLGLR 372
Query: 290 VGGRFYTPGVAS-RYDVAETCALLLGGDADLYMAEFDKLRGPTMRFSFLRDLYPKA-VAE 347
G P + S D A+ C LLG + ++ G ++ S+L + + E
Sbjct: 371 TDG---APLIGSTNLDWADLCEELLG-----VRPQEGEIEGSVVKLSWLAHYFSHINIDE 216
Query: 348 GRYEHAARM---YLMHLVGATLFADKSGGHSFSARWIGMLQDLERVSEFAWGAMALATLY 404
G E R +++ +G +F +KS S R++ L+D E S +AWG LA LY
Sbjct: 215 GNVEQLQRFIRAWILRFIGGVIFVNKSSSR-VSLRYLQFLRDFE*CSTYAWGPAMLAYLY 39
Query: 405 DQLGQSSRSGVK 416
++ ++ VK
Sbjct: 38 REMCSTTDYKVK 3
>TC211858
Length = 524
Score = 45.4 bits (106), Expect(3) = 8e-14
Identities = 26/74 (35%), Positives = 37/74 (49%), Gaps = 4/74 (5%)
Frame = -3
Query: 421 YTSLLM--AWVFEHFPDRLVRRYANPAYTEDQPRACRWTESRSGHARLDER--RVLLDEL 476
Y +L+ W++EHFP + + + Y E PRA RW S++ + R D L
Sbjct: 258 YVNLIFL*CWIYEHFPS-VHQCVIDDTY*ETSPRASRWLTSKAHMKGITGAPYRARCDAL 82
Query: 477 TADDVTWTPYEAHR 490
T DV+W PY HR
Sbjct: 81 TVIDVSWLPYTEHR 40
Score = 40.0 bits (92), Expect(3) = 8e-14
Identities = 17/46 (36%), Positives = 30/46 (64%)
Frame = -1
Query: 380 WIGMLQDLERVSEFAWGAMALATLYDQLGQSSRSGVKQMGGYTSLL 425
++ +DL + +AWG AL +Y+QL ++SR+ +Q+ GY +LL
Sbjct: 458 YLDAFRDLGQSGGYAWGVAALVHMYNQLDEASRTTTRQIVGYLTLL 321
Score = 29.3 bits (64), Expect(3) = 8e-14
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2
Query: 357 YLMHLVGATLFADKS 371
YL+HLVG TLFA+KS
Sbjct: 523 YLLHLVGCTLFANKS 479
>BI470376 weakly similar to GP|14090338|dbj P0638D12.5 {Oryza sativa
(japonica cultivar-group)}, partial (5%)
Length = 429
Score = 70.9 bits (172), Expect = 2e-12
Identities = 30/66 (45%), Positives = 48/66 (72%)
Frame = -1
Query: 228 EVRLIVERSGLYPLVRCSYVETDPGLISALVERWHEETSSFHMPFGEMTVTLDDVSALLH 287
E+ +++ SGLYP+++ + ++ + L++A +ERW ET +FH+ +GE T+TL DVS LL
Sbjct: 408 EIIPLLQISGLYPIMKLAQLKVNGALVNAFIERWRPETHTFHLKYGEATITLQDVSVLLG 229
Query: 288 IPVGGR 293
IPV GR
Sbjct: 228 IPVDGR 211
>BQ576456
Length = 424
Score = 62.0 bits (149), Expect = 7e-10
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Frame = +1
Query: 272 FGEMTVTLDDVSALLHIPVGG---RFYTPGVASRYDVAETCAL-LLGGDADLYMAEFDKL 327
+GE+T+TLDD++ LLH+P+ G RF GV D A + LL + A+ +
Sbjct: 28 WGELTITLDDMACLLHLPITGALHRFEPLGV----DEAVLLLMELLEVSREEARAKIVRA 195
Query: 328 RGPTMRFSFLRDLYPKAVAEGRYEHAARMYLMHLVGATLFADKSGGHSFSARWIGMLQDL 387
+R S+LR++Y + A R YL HLV TLFA+KS H G DL
Sbjct: 196 HRAYVRLSWLREVYQSRCQARCWIVAVRAYLFHLVDCTLFANKSATHVHVVHLKG-F*DL 372
Query: 388 ERVSEFAWGAMALATLY 404
+ WG AL +Y
Sbjct: 373 C*SGGYGWGVAALVHMY 423
>AI495080
Length = 407
Score = 58.9 bits (141), Expect = 6e-09
Identities = 31/78 (39%), Positives = 40/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 416 KQMGGYTSLLMAWVFEHFPDRLVRRYANPAYTEDQPRACRW--TESRSGHARLDERRVLL 473
+Q+ GY +LL W++EHFP + A+ Y E PRACRW T+ R R L
Sbjct: 2 RQLSGYITLLQCWIYEHFPS-VAESTAD*DYDEASPRACRWIATKKTVKSIRTPSYRERL 178
Query: 474 DELTADDVTWTPYEAHRE 491
+ L DV W Y HRE
Sbjct: 179 NRLRISDVCWILYGEHRE 232
>TC214082 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, partial (34%)
Length = 1032
Score = 58.9 bits (141), Expect = 6e-09
Identities = 43/120 (35%), Positives = 53/120 (43%), Gaps = 13/120 (10%)
Frame = +1
Query: 54 TTEVPAPATEVPATQ-----VPD------TEVPAPATEVPATQVPATEVPALSTPEVTAT 102
TT P PATE PAT+ VP TEVPAP + A + TE P T E T T
Sbjct: 187 TTPEPVPATEAPATEQAAAEVPAQEEQQATEVPAPESTTEAPKEETTEAPTTETVETTTT 366
Query: 103 EVSPQSTPEVTAHDTVEPSTSSLDID--AVEEPESESGSESGSESEIEGEDVEVEDPNMP 160
E + P+ A +T E T + + A EE E E E+E E E E + P
Sbjct: 367 EEAKPEEPKEVAVETEEVVTKETEEEKPAAEEKSEEKTEEVKEEAEEPKETTETETESAP 546
Score = 56.6 bits (135), Expect = 3e-08
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +1
Query: 50 APKATTEVPA-PATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEV-SPQ 107
A + T VP TEV TQ E P PATE PAT+ A EVPA E ATEV +P+
Sbjct: 124 AHQTPTTVPENETTEVIKTQETTPE-PVPATEAPATEQAAAEVPA--QEEQQATEVPAPE 294
Query: 108 STPEVTAHDTVE-PSTSSLDIDAVEEPESESGSESGSES-EIEGEDVEVEDP 157
ST E +T E P+T +++ EE + E E E+ E+ ++ E E P
Sbjct: 295 STTEAPKEETTEAPTTETVETTTTEEAKPEEPKEVAVETEEVVTKETEEEKP 450
>CO979307
Length = 553
Score = 58.9 bits (141), Expect = 6e-09
Identities = 53/150 (35%), Positives = 72/150 (47%), Gaps = 2/150 (1%)
Frame = -3
Query: 360 HLVGATLFADKSGGHSFSARWIGMLQDLERVSEFAWGAMALATLYDQLGQSSRSGVKQMG 419
HL+ + +FADKS H A ++ L +L + G AL LYD L S KQ G
Sbjct: 551 HLISSMIFADKSLAHVHVA-YL*YLSNLTACHK*V*GVAALVYLYDHLSYVSLDDNKQCG 375
Query: 420 GYTSLLMAWVFEHFPDRLVRRYANPA-YTEDQPRACRWTE-SRSGHARLDERRVLLDELT 477
Y +LLMA VFEH P Y+NP Y++ P RW + HA L + R ++ +
Sbjct: 374 DYMTLLMA*VFEHLPS---VGYSNPEDYSDGDPLNTRWNPLGGTRHALLVKER--MNNIH 210
Query: 478 ADDVTWTPYEAHREWRQRDEGTLLLTGFGY 507
+ PYE ++ R E TL FGY
Sbjct: 209 MNVFI*CPYE*NKLVRPFVEQTL---*FGY 129
>TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, partial (68%)
Length = 1306
Score = 56.2 bits (134), Expect = 4e-08
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Frame = +1
Query: 50 APKATTEVPA-PATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEVSPQS 108
A + T VP TEV TQ APATE PA +VPATE PA P +T +P+
Sbjct: 112 AQQTPTTVPENETTEVSKTQETTPVTEAPATEQPAAEVPATEQPAAEAPAPESTTEAPKE 291
Query: 109 TPEVTAHDTVEPSTSSLDID------------AVEEPESESGSESGSESEIEGEDVEVED 156
+TVE +T+ + + +E E E +E SE + E E E+
Sbjct: 292 ETTEAPTETVEKTTTEVAPEEPKEVPVETEEVVAKETEEEKPAEEKSEEKTEEVKEEAEE 471
Query: 157 P 157
P
Sbjct: 472 P 474
>TC211545 weakly similar to UP|Q7XHQ1 (Q7XHQ1) Calcineurin-like
phosphoesterase-like, partial (11%)
Length = 1127
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +3
Query: 242 VRCSYVETDPGLISALVERWHEETSSFHMPFGEMTVTLDDVSALLHIPVGGRFYTPGVAS 301
++ Y++ + LI+ L+ER +T +FHM E T+TL DVS LL + V G TP + S
Sbjct: 3 IKMGYLKINASLITVLIER*RPKTHTFHMRCRECTITLQDVSVLLGMRVDG---TPLIGS 173
Query: 302 -RYDVAETCALLLGGDADLYMAEFDKLRGPTMRFSFL 337
D A+ C LLG D+L+G +R S+L
Sbjct: 174 TNLDWADLCV*LLG-----VRP*EDELQGSVVRLSWL 269
>TC214230 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, partial (29%)
Length = 396
Score = 49.3 bits (116), Expect = 5e-06
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 50 APKATTEVPA-PATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEVSPQS 108
A + T VP TEV TQ APATE PA +VPATE PA P +T +P+
Sbjct: 116 AQQTPTTVPENETTEVSKTQETTPVTEAPATEQPAAEVPATEQPAAEAPAPESTTEAPKE 295
Query: 109 TPEVTAHDTVEPSTS 123
+TVE +T+
Sbjct: 296 ETTEAPTETVEKTTT 340
>TC214265 UP|PRP3_SOYBN (P15642) Repetitive proline-rich cell wall protein 3
precursor, complete
Length = 849
Score = 45.8 bits (107), Expect = 5e-05
Identities = 35/75 (46%), Positives = 40/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 50 APKATTEVPA-PATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEV-SPQ 107
A + T VP TEV TQ E P PATE PAT+ A EVPA E ATEV +P+
Sbjct: 83 AHQTPTTVPENETTEVIKTQETTPE-PVPATEAPATEQAAAEVPA--QEEQQATEVPAPE 253
Query: 108 STPEVTAHDTVEPST 122
ST E +T E T
Sbjct: 254 STTEAPKEETTETPT 298
>TC204103 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, partial (38%)
Length = 845
Score = 44.7 bits (104), Expect = 1e-04
Identities = 32/104 (30%), Positives = 42/104 (39%), Gaps = 3/104 (2%)
Frame = +3
Query: 55 TEVPAPATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVT---ATEVSPQSTPE 111
T++ E PATQV TE P T A + V EVT EV PE
Sbjct: 189 TKIEETTPEQPATQVTTTEEPKEETTKEAKEEEEAPVETNEATEVTEEVKPEVEENPAPE 368
Query: 112 VTAHDTVEPSTSSLDIDAVEEPESESGSESGSESEIEGEDVEVE 155
T + V+ T + VEE + E + + E + E V VE
Sbjct: 369 RTEEEEVKEETKETESAPVEEQKQEENKPAETVEETKTEQVSVE 500
Score = 34.3 bits (77), Expect = 0.16
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 88 ATEVPALSTPEVTATEVSPQSTPEVTAHDTVEPSTSSLDIDAVEEPESESGSESGSESEI 147
A ++ + + T T V+ EVT + P + + EEP+ E+ E+ E E
Sbjct: 114 AFQMATVEVAQQTPTTVTENEATEVTKIEETTPEQPATQVTTTEEPKEETTKEAKEEEEA 293
Query: 148 ---EGEDVEVEDPNMPPLQRDP 166
E EV + P ++ +P
Sbjct: 294 PVETNEATEVTEEVKPEVEENP 359
>BG839790 similar to PIR|D96521|D96 protein F21D18.16 [imported] -
Arabidopsis thaliana, partial (2%)
Length = 504
Score = 39.3 bits (90), Expect(2) = 2e-04
Identities = 14/39 (35%), Positives = 27/39 (68%)
Frame = -1
Query: 232 IVERSGLYPLVRCSYVETDPGLISALVERWHEETSSFHM 270
++ + G Y +++ SY++ + L++ L+ERW ET +FHM
Sbjct: 261 LLRQCGFY*IMKMSYLKINASLMTVLIERWRPETHTFHM 145
Score = 24.3 bits (51), Expect(2) = 2e-04
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 267 SFHMPFGEMTVTLDDVSALLHIPVGGRFYTP-GVASRYDVAETCALLLG 314
S M E T+TL DVS LL + V TP + D AE+C + G
Sbjct: 151 SHEMRCEECTITLQDVSXLLGLRVD---ETPLXGQTNLDWAESCERIAG 14
>TC203287 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment), partial
(14%)
Length = 967
Score = 43.5 bits (101), Expect = 3e-04
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = +3
Query: 50 APKATTEVPAPATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEVSPQST 109
AP A P T P P PAPA PAT PAT PA +TP + + T
Sbjct: 123 APGAAPTQPPTTTPSPP---PPRSAPAPAPTPPATPPPATPPPAAATPPPATSPPATTPT 293
Query: 110 PEVTAHDTVEPSTSSLDIDAVEEP 133
P TA T S ++ + + P
Sbjct: 294 PTPTAAPTPASSPATSPVPSASSP 365
Score = 43.5 bits (101), Expect = 3e-04
Identities = 38/114 (33%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Frame = +3
Query: 45 GARKGAPKATTEVPAPATEVPATQVPDTEVPAPATEVP--ATQVPATEVPALS-TPEVTA 101
GA P TT P P PA P PAT P AT PAT PA + TP TA
Sbjct: 129 GAAPTQPPTTTPSPPPPRSAPAPAPTPPATPPPATPPPAAATPPPATSPPATTPTPTPTA 308
Query: 102 TEV---SPQSTPEVTAHDTVEPSTSSL---DIDAVEEPESESGSESGSESEIEG 149
SP ++P +A P T+ E P S + S S++ I G
Sbjct: 309 APTPASSPATSPVPSASSPPAPGTAGPAPGPAGGAEPPPPPSAAFSASKAFIAG 470
>BG790175 similar to PIR|T09854|T098 proline-rich cell wall protein - upland
cotton, partial (21%)
Length = 415
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/61 (42%), Positives = 28/61 (45%)
Frame = +1
Query: 50 APKATTEVPAPATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEVSPQST 109
+P PAPA PAT P T PA AT PAT PAT TP T S +T
Sbjct: 13 SPPPPRSAPAPAPTPPATPPPATPPPAAATPPPATSPPAT--TPTPTPTAAPTPASSPAT 186
Query: 110 P 110
P
Sbjct: 187 P 189
Score = 38.9 bits (89), Expect = 0.007
Identities = 27/80 (33%), Positives = 35/80 (43%)
Frame = +1
Query: 70 PDTEVPAPATEVPATQVPATEVPALSTPEVTATEVSPQSTPEVTAHDTVEPSTSSLDIDA 129
P PAPA PAT PAT PA +TP + + TP TA T S ++
Sbjct: 22 PPRSAPAPAPTPPATPPPATPPPAAATPPPATSPPATTPTPTPTAAPTPASSPAT----- 186
Query: 130 VEEPESESGSESGSESEIEG 149
P S + S S++ I G
Sbjct: 187 ---PPPPSAAFSASKAFIAG 237
>TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (44%)
Length = 996
Score = 43.1 bits (100), Expect = 3e-04
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +1
Query: 58 PAPATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEVS--PQSTPEVTAH 115
P PA+ PA+ P T P PA+ P + PAT PA P +T T +S P ++P
Sbjct: 415 PPPASPPPASPPPAT--PPPASPPPFSPPPATPPPATPPPALTPTPLSSPPATSPAPAPA 588
Query: 116 DTVEPSTS-SLDIDAVEEPESESGSESGSE 144
V P+ S SL S SG +SG+E
Sbjct: 589 KVVAPALSPSLAPGPSLSTISPSGDDSGAE 678
Score = 37.0 bits (84), Expect = 0.025
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 51 PKATTEVPAPATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEVSPQSTP 110
P A+T PAP + P P + P PA+ PA+ PA+ PA P P +TP
Sbjct: 286 PPASTPPPAPLSSPPPASPPPSS-PPPASPPPASPPPASPPPASPPPASPPPASPPPATP 462
Score = 34.7 bits (78), Expect = 0.12
Identities = 21/56 (37%), Positives = 27/56 (47%), Gaps = 3/56 (5%)
Frame = +1
Query: 58 PAPATEVPATQVPDTEVPA---PATEVPATQVPATEVPALSTPEVTATEVSPQSTP 110
P PA+ PA+ P + PA PA+ PA+ PAT PA P P +TP
Sbjct: 355 PPPASPPPASPPPASPPPASPPPASPPPASPPPATPPPASPPPFSPPPATPPPATP 522
Score = 30.4 bits (67), Expect = 2.3
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +1
Query: 51 PKATTEVPAPATEVPATQVP--DTEVPAPATEVPATQVPATEVPALSTPEVTATEVSP 106
P ++ P P++ PA P T PAP + P P + P S P + SP
Sbjct: 229 PIQSSPPPVPSSPPPAQSPPPASTPPPAPLSSPPPASPPPSSPPPASPPPASPPPASP 402
>TC218095
Length = 925
Score = 42.4 bits (98), Expect = 6e-04
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 4/70 (5%)
Frame = +1
Query: 508 TYLPMRGGDPPLE---HPVIAIGHVTN-HFVQLKLVSGHPMPPIAPQWEYNVEEPESEWC 563
T+ P+RG PPL H +I+IG V HFVQ+ L + +PP A QW W
Sbjct: 442 TFFPLRGR-PPLSQSSHRLISIGFVHKCHFVQVVLKADSAIPPTALQWSRYCNAESRSWE 618
Query: 564 KPYKERLDRF 573
Y R+ +F
Sbjct: 619 TSYVSRMQQF 648
>TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall protein,
partial (48%)
Length = 1076
Score = 42.0 bits (97), Expect = 8e-04
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +3
Query: 58 PAPATEVPATQVPDTEVP---APATEVPATQVPATEVPALSTPEVTATEVSPQSTPEVTA 114
P PA+ P++ P + P PAT PAT PA P+L TP VT P S+P +
Sbjct: 492 PPPASPPPSSPPPSSPPPFSPPPATPPPATPPPAVPPPSL-TPTVTPLSSPPVSSPAPSP 668
Query: 115 HDTVEPSTS-SLDIDAVEEPESESGSESGSES 145
P+ S SL S SG +SG+++
Sbjct: 669 SKVFAPALSPSLAPGPSLSTISPSGDDSGAQN 764
>TC220238 UP|Q84VH5 (Q84VH5) Envelope-like protein (Fragment), complete
Length = 2128
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 57 VPAPATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTP-EVTATEVSPQSTPEVTAH 115
VP +VP + P+ VP +VP + P EV LS+P + +TE Q+T E A
Sbjct: 490 VPDADKDVPTSSTPNVSVPDAEKDVPTSSTPNAEV--LSSPSKEDSTEEEDQATEETPAP 663
Query: 116 DTVEPSTSSL-DIDAVEEPE 134
EP+ L D++ VE E
Sbjct: 664 RAPEPAPGDLIDLEEVESDE 723
>TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
(AtAGP4) (AT5g10430/F12B17_220), partial (50%)
Length = 966
Score = 41.2 bits (95), Expect = 0.001
Identities = 30/104 (28%), Positives = 36/104 (33%), Gaps = 8/104 (7%)
Frame = +2
Query: 45 GARKGAPKATTEVPAPATEVPATQVPDTEVPAPATEVPATQVP--------ATEVPALST 96
GA P TT P P PA P PAT PA P AT PA +
Sbjct: 200 GAAPSQPPTTTPSPPPPRSAPAPAPTTPATPPPATPPPAATPPPAATPPPAATPTPAPAP 379
Query: 97 PEVTATEVSPQSTPEVTAHDTVEPSTSSLDIDAVEEPESESGSE 140
P T S + + TV PS +S + P +E
Sbjct: 380 PTAAPTPASSPAASPPSPSPTVTPSPTSPNTPPGPSPGPSGSAE 511
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/123 (30%), Positives = 43/123 (34%)
Frame = +2
Query: 50 APKATTEVPAPATEVPATQVPDTEVPAPATEVPATQVPATEVPALSTPEVTATEVSPQST 109
AP A P T P P PAPA PAT PAT PA + P P +T
Sbjct: 194 APGAAPSQPPTTTPSPP---PPRSAPAPAPTTPATPPPATPPPAATPP--------PAAT 340
Query: 110 PEVTAHDTVEPSTSSLDIDAVEEPESESGSESGSESEIEGEDVEVEDPNMPPLQRDPPFP 169
P A T P+ + A P S + S S P + P P P
Sbjct: 341 PPPAATPTPAPAPPT----AAPTPASSPAASPPSPS-----------PTVTPSPTSPNTP 475
Query: 170 GGP 172
GP
Sbjct: 476 PGP 484
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,755,823
Number of Sequences: 63676
Number of extensions: 413805
Number of successful extensions: 3276
Number of sequences better than 10.0: 208
Number of HSP's better than 10.0 without gapping: 2803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3085
length of query: 597
length of database: 12,639,632
effective HSP length: 103
effective length of query: 494
effective length of database: 6,081,004
effective search space: 3004015976
effective search space used: 3004015976
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0176a.11