TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0175.7
         (402 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC216434 similar to UP|Q8GT65 (Q8GT65) Serpin-like protein (Frag...   427  e-120
TC216436 similar to UP|Q8GT65 (Q8GT65) Serpin-like protein (Frag...   180  9e-46
TC216435 similar to UP|Q8GT65 (Q8GT65) Serpin-like protein (Frag...   163  1e-40
TC230456 similar to UP|Q94A50 (Q94A50) AT3g55070/T15C9_70, parti...    30  1.9
TC217458 UP|Q39682 (Q39682) Glycine-rich protein (Fragment), par...    29  3.3
CB063446                                                               28  5.7
CO982496                                                               28  9.6
TC208980 similar to UP|Q9FF46 (Q9FF46) ABC transporter-like prot...    28  9.6
TC229768                                                               28  9.6
TC209589 similar to UP|Q9LU28 (Q9LU28) RNA methyltransferase-lik...    28  9.6
BI316623                                                               28  9.6

>TC216434 similar to UP|Q8GT65 (Q8GT65) Serpin-like protein (Fragment),
           partial (96%)
          Length = 1436

 Score =  427 bits (1097), Expect = e-120
 Identities = 238/392 (60%), Positives = 286/392 (72%), Gaps = 3/392 (0%)
 Frame = +1

Query: 1   MDLQKSIRCQTEVALSITKHLFSKEEYQEKNLVFSPFSLHAILSVMAVGSAGSTLDELFS 60
           MDL++SI  QT+VALSI+K L SKE  ++KNLV+SP SLH +LS++A GS G TLD+L S
Sbjct: 10  MDLRESISNQTDVALSISKLLLSKEA-RDKNLVYSPLSLHVVLSIIAAGSKGPTLDQLLS 186

Query: 61  FLRFDSVDHLNTFFSQVLSTVLSDTTPSF--LLSFVNEMWADKSLALSHSFKQLMTTHYK 118
           FLR  S DHLN+F SQ+ + VLSD +P+    LSF + +W ++SL+L  SFKQL++  YK
Sbjct: 187 FLRSKSTDHLNSFASQLFAVVLSDASPAGGPRLSFADGVWVEQSLSLLPSFKQLVSADYK 366

Query: 119 ATLALVDFRTKGDQVCREVNSWVEKETNGLITELLPTNAVHKLTKLIFANALYFKGVWKH 178
           ATLA VDF+TK  +V  EVNSW EKETNGL+ +LLP  +V   T+LIFANALYFKG W  
Sbjct: 367 ATLASVDFQTKAVEVANEVNSWAEKETNGLVKDLLPPGSVDSSTRLIFANALYFKGAWNE 546

Query: 179 TFDPSMTFVDDFHLLNGTSIEVPFMSSEKKTQFIRTFDGFNVLRLSYKQGRDKKLRFSMC 238
            FD S+T   DFHLL+G SI VPFM+S +K QFIR FDGF VL L YKQG DK+ +F+M 
Sbjct: 547 KFDSSITKDYDFHLLDGRSIRVPFMTS-RKNQFIRAFDGFKVLGLPYKQGEDKR-QFTMY 720

Query: 239 IFLPNAKDGLPSLIEKLASESCFLKGKLPRQKVRVRKFRIPKFKICFELEASNVLKELGV 298
            FLP  KDGL +L EKLASES FL+ KLP  K+ V  FRIP+FKI F  EASNVLKELGV
Sbjct: 721 FFLPETKDGLLALAEKLASESGFLERKLPNNKLEVGDFRIPRFKISFGFEASNVLKELGV 900

Query: 299 VSPFSKSNANFTKMVVSPLDE-LCVESIHHKASIEVNEEGTEAGVACSMCDVKLCVSART 357
           V PFS      T+MV S + + L V  I HK+ IEVNEEGTEA  A +      C    T
Sbjct: 901 VLPFSV--GGLTEMVDSAVGQNLFVSDIFHKSFIEVNEEGTEAAAATAATIQFGCAMFPT 1074

Query: 358 GIDFVADHPFLFLIREDLTGTILFIGQVLHPE 389
            IDFVADHPFLFLIREDLTGT+LFIGQVL+P+
Sbjct: 1075EIDFVADHPFLFLIREDLTGTVLFIGQVLNPQ 1170


>TC216436 similar to UP|Q8GT65 (Q8GT65) Serpin-like protein (Fragment),
           partial (40%)
          Length = 489

 Score =  180 bits (457), Expect = 9e-46
 Identities = 97/163 (59%), Positives = 118/163 (71%)
 Frame = +2

Query: 105 LSHSFKQLMTTHYKATLALVDFRTKGDQVCREVNSWVEKETNGLITELLPTNAVHKLTKL 164
           L  SFKQL+   YKATLA VDF+TK  +V  EVNSW EKETNGL+ +LLP  +V   TKL
Sbjct: 5   LHPSFKQLVRAQYKATLASVDFQTKAVEVTNEVNSWAEKETNGLVKDLLPPGSVDNSTKL 184

Query: 165 IFANALYFKGVWKHTFDPSMTFVDDFHLLNGTSIEVPFMSSEKKTQFIRTFDGFNVLRLS 224
           IFANAL+ KG W   FD S+T   D HLLNG+S++VPFM+S+KK QFI   + F VL LS
Sbjct: 185 IFANALWCKGAWNEKFDASITKHYDLHLLNGSSVKVPFMTSKKK-QFIMA*NSFKVLGLS 361

Query: 225 YKQGRDKKLRFSMCIFLPNAKDGLPSLIEKLASESCFLKGKLP 267
           YKQG DK+ +F+M  FLP  KDGL +L EKLA +S FL+ +LP
Sbjct: 362 YKQGEDKR-QFTMYFFLPETKDGLLALAEKLAFDSGFLERRLP 487


>TC216435 similar to UP|Q8GT65 (Q8GT65) Serpin-like protein (Fragment),
           partial (37%)
          Length = 820

 Score =  163 bits (413), Expect = 1e-40
 Identities = 94/144 (65%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
 Frame = +2

Query: 246 DGLPSLIEKLASESCFLKGKLPRQKVRVRKFRIPKFKICFELEASNVLKELGVVSPFSKS 305
           DGL +L EKLASES FL+ KLP QKV V  FRIP+FKI F  E SNVLKELGVV PFS  
Sbjct: 11  DGLLALAEKLASESGFLERKLPNQKVEVGDFRIPRFKISFGFEVSNVLKELGVVLPFSV- 187

Query: 306 NANFTKMVVSPLDE-LCVESIHHKASIEVNEEGTEAGVACSMCDVKLCVSARTGIDFVAD 364
               T+MV SP+ + LCV +I HK+ IEVNEEGTEA  A S           T IDFVAD
Sbjct: 188 -GGLTEMVDSPVGQNLCVSNIFHKSFIEVNEEGTEAAAATSATIRLRSAMLPTKIDFVAD 364

Query: 365 HPFLFLIREDLTGTILFIGQVLHP 388
           HPFLFLIREDLTGT+LFIGQVL P
Sbjct: 365 HPFLFLIREDLTGTVLFIGQVLDP 436


>TC230456 similar to UP|Q94A50 (Q94A50) AT3g55070/T15C9_70, partial (72%)
          Length = 907

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = +3

Query: 101 KSLALSHSFKQLMTTHYKATLALVDFRTKGDQVCREVNSWVEKETNGLITELLPTNAVHK 160
           +SL L H F ++   +YK TL     R     V +E+++ +        T+L P +AV+ 
Sbjct: 24  ESLKLEHQFLRVPFEYYKKTL-----RANHRAVEKEMSAVISGVNEAAATDLSPDDAVNH 188

Query: 161 LTKLI 165
           L  L+
Sbjct: 189 LNSLV 203


>TC217458 UP|Q39682 (Q39682) Glycine-rich protein (Fragment), partial (9%)
          Length = 918

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 293 LKELGVVSPFSKSNANFTKMVVSPLDELCVE-SIHHK 328
           L  +GVV P+  +N+NF  ++ + +D +    S HH+
Sbjct: 678 LNNVGVVPPYRNTNSNFIGLIATDIDSITATLSRHHR 568


>CB063446 
          Length = 422

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 212 IRTFDGFNVLRLSYKQGRDKKLRFSMCIFLPNAKDGLPSLIEKLASESC 260
           +RTFDGFN          D  + FS C++  +++   PS      S++C
Sbjct: 422 LRTFDGFNC-------AIDFVITFSSCVYKQSSRRVRPSAFNACPSKTC 297


>CO982496 
          Length = 596

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 27/96 (28%), Positives = 39/96 (40%)
 Frame = +1

Query: 44  SVMAVGSAGSTLDELFSFLRFDSVDHLNTFFSQVLSTVLSDTTPSFLLSFVNEMWADKSL 103
           +V  +G+ GST       L      H       +LS +L+  TP+ LLSF N      S 
Sbjct: 220 NVSVIGNKGSTWIPSLHSLHVAGAHH------SLLSLLLAHRTPTILLSFAN----SSSY 369

Query: 104 ALSHSFKQLMTTHYKATLALVDFRTKGDQVCREVNS 139
            LS +F     T ++   A +   T  D V   + S
Sbjct: 370 KLSSAF-----TCHQVCAARISNATNVDPVSTRLES 462


>TC208980 similar to UP|Q9FF46 (Q9FF46) ABC transporter-like protein, partial
           (15%)
          Length = 820

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 31/141 (21%), Positives = 52/141 (35%), Gaps = 13/141 (9%)
 Frame = +1

Query: 49  GSAGSTLDELFSFLRFDSVDHLNT------------FFSQVLSTVLSDTTPSFLLSF-VN 95
           G + S +  L  FL  D++DH NT            FF+  +ST   +      L + V 
Sbjct: 67  GESDSGMSSLAYFLSKDTIDHXNTLIKPVVYLSMFYFFTNPISTFADNYVVLLCLVYCVT 246

Query: 96  EMWADKSLALSHSFKQLMTTHYKATLALVDFRTKGDQVCREVNSWVEKETNGLITELLPT 155
            +    S+       QL +      L L+  + K  +V + + +    +           
Sbjct: 247 GIAYALSIFFEPGAAQLWSVLLPVVLTLIATQPKDSKVLKNIANLCYSKW---------- 396

Query: 156 NAVHKLTKLIFANALYFKGVW 176
                L  L+ ANA  ++GVW
Sbjct: 397 ----ALQALVVANAERYQGVW 447


>TC229768 
          Length = 1023

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
 Frame = -3

Query: 190 FHLLNGTSIEVPFMSSEKKTQFIRTFDGFNVLRLSYKQGRDKKLRFSMCIFLPNAKDGLP 249
           FHLL GTS E+  + S   +  +  FDG ++   S   G    L  S C   P+  +  P
Sbjct: 730 FHLLRGTSSEISAIVSSSSSSGL--FDG-SICDFSISLGLRSALLLS*C---PSESNSCP 569

Query: 250 SLIEKLA--SESCFLKGKLPRQKVRVRKFRIPKFKICFELEASNV 292
            +    A    S  L  +LP   + +    +P  + CF    S+V
Sbjct: 568 LIFSLKAPLDSSTSLSSELPCGTLSLSSESLP-LQSCFSSSDSSV 437


>TC209589 similar to UP|Q9LU28 (Q9LU28) RNA methyltransferase-like protein,
           partial (52%)
          Length = 1491

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 159 HKLTKLIFANALYFKGVWKH 178
           H+L KL  AN L  +GVW+H
Sbjct: 886 HRLLKLQKANTLNMRGVWEH 827


>BI316623 
          Length = 408

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 159 HKLTKLIFANALYFKGVWKH 178
           H+L KL  AN L  +GVW+H
Sbjct: 270 HRLLKLQKANTLNMRGVWEH 211


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.323    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,259,519
Number of Sequences: 63676
Number of extensions: 232172
Number of successful extensions: 1193
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of query: 402
length of database: 12,639,632
effective HSP length: 99
effective length of query: 303
effective length of database: 6,335,708
effective search space: 1919719524
effective search space used: 1919719524
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)