BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0174.1
(590 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC231051 similar to UP|Q94AA8 (Q94AA8) AT5g63200/MDC12_17, parti... 358 5e-99
TC207489 weakly similar to UP|Q94AA8 (Q94AA8) AT5g63200/MDC12_17... 347 1e-95
TC207490 weakly similar to UP|Q94AA8 (Q94AA8) AT5g63200/MDC12_17... 293 1e-79
AI736725 141 9e-34
AW734141 64 2e-10
TC218328 similar to UP|Q84VX9 (Q84VX9) At4g08320, partial (32%) 55 7e-08
TC205633 similar to UP|O81280 (O81280) Peroxisomal targeting sig... 47 3e-05
TC215378 similar to UP|Q94EJ1 (Q94EJ1) At1g22700/T22J18_13, part... 45 7e-05
BQ299342 similar to GP|18139887|gb O-linked N-acetyl glucosamine... 45 9e-05
TC205632 similar to UP|O82444 (O82444) Peroxisomal targeting seq... 43 3e-04
TC231862 similar to GB|AAL60196.1|18139887|AF441079 O-linked N-a... 38 0.002
TC220196 similar to GB|AAO63361.1|28950875|BT005297 At5g48850 {A... 38 0.011
TC210267 similar to UP|Q8LGU6 (Q8LGU6) HOBBIT protein, partial (... 38 0.011
TC210367 similar to UP|Q8GZN1 (Q8GZN1) Pollen-specific calmoduli... 36 0.042
AW308911 similar to GP|19913115|em SPY protein {Lycopersicon esc... 33 0.27
TC209590 similar to GB|AAP13360.1|30023654|BT006252 At4g30480 {A... 33 0.27
BQ454144 weakly similar to GP|9802536|gb| F17L21.25 {Arabidopsis... 33 0.35
TC233446 similar to UP|Q6K715 (Q6K715) Kinesin light chain-like,... 32 0.60
TC220511 31 1.8
TC222841 31 1.8
>TC231051 similar to UP|Q94AA8 (Q94AA8) AT5g63200/MDC12_17, partial (35%)
Length = 706
Score = 358 bits (918), Expect = 5e-99
Identities = 180/204 (88%), Positives = 194/204 (94%)
Frame = +3
Query: 123 EIERPDLLSLVQIHHAQCLILESSSENSSDKELEPHELKEILSKLKESVQFDIRQAAVWN 182
EI+RP+LLSLVQIHHAQCLILESSSENSSDKELEP EL+EILSKLKESV+ DIRQ AVWN
Sbjct: 3 EIDRPELLSLVQIHHAQCLILESSSENSSDKELEPDELEEILSKLKESVKSDIRQTAVWN 182
Query: 183 TLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGNLELSAKCFQELILKD 242
TLGFILLKTGRV+SA+SVLSSLL+IAPENYDCLGNLGIAYL+IGNLELSAKCFQELILKD
Sbjct: 183 TLGFILLKTGRVKSAVSVLSSLLSIAPENYDCLGNLGIAYLKIGNLELSAKCFQELILKD 362
Query: 243 QNHPVALVNYAALLLCKYASVVAGAGASASEGALADQVMAANVAKECLLAAIKADVKSAH 302
QNHP ALVNYAALLLCKYASVVAG GASA+EGA+ DQ+M+ANVAKECLLAA+KAD KSAH
Sbjct: 363 QNHPAALVNYAALLLCKYASVVAGPGASAAEGAMTDQIMSANVAKECLLAAVKADSKSAH 542
Query: 303 IWGNLAYAFSISGDHRSSSKCLEK 326
+W NLA AFSI GDHRSSSKCLEK
Sbjct: 543 VWANLACAFSIIGDHRSSSKCLEK 614
Score = 31.2 bits (69), Expect = 1.3
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +3
Query: 501 AILSNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKA 560
A+ + LG + + A ++ + L + P NLG+ ++ G LE + CF++
Sbjct: 171 AVWNTLGFILLKTGRVKSAVSVLSSLLSIAPENYDCLGNLGIAYLKIGNLELSAKCFQEL 350
Query: 561 LQSDPLLDAAKSNLVKVVTMSKICK 585
+ D AA N ++ +CK
Sbjct: 351 ILKDQNHPAALVNYAALL----LCK 413
>TC207489 weakly similar to UP|Q94AA8 (Q94AA8) AT5g63200/MDC12_17, partial
(40%)
Length = 800
Score = 347 bits (889), Expect = 1e-95
Identities = 169/205 (82%), Positives = 186/205 (90%)
Frame = +1
Query: 383 AWAGLAMVHKAQHEISSAYESEQHVLTEMEERAVCSLKQAVAEDPDDPVRWHQLGVHSLC 442
A + LAMVHKAQHEI AY EQ+ L E+EERAVCSLKQA+AEDP+D V+WHQLG+HSLC
Sbjct: 1 AXSXLAMVHKAQHEIXXAYXXEQNGLREVEERAVCSLKQAIAEDPNDAVQWHQLGIHSLC 180
Query: 443 TQQFKTSQKYLKAAVACDRGCSYTWSNLGVSLQLSEEPSQAEKAYKQALLLATKQQAHAI 502
+QFKTSQKYLKAAVACD+ CSY W+ LGVSLQLSEEPSQAE+ YKQAL LAT +QAH I
Sbjct: 181 ARQFKTSQKYLKAAVACDKDCSYAWATLGVSLQLSEEPSQAEEVYKQALSLATTKQAHVI 360
Query: 503 LSNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQ 562
LSNLGI YRH+K+YQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCF+KALQ
Sbjct: 361 LSNLGILYRHQKQYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFDKALQ 540
Query: 563 SDPLLDAAKSNLVKVVTMSKICKGL 587
SDPLLDAAKSNL+KVV MSK+CKGL
Sbjct: 541 SDPLLDAAKSNLIKVVAMSKLCKGL 615
Score = 30.0 bits (66), Expect = 3.0
Identities = 20/87 (22%), Positives = 39/87 (43%)
Frame = +1
Query: 156 EPHELKEILSKLKESVQFDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCL 215
EP + +E+ K S+ + + + LG + + Q A ++ + L + P
Sbjct: 289 EPSQAEEVY-KQALSLATTKQAHVILSNLGILYRHQKQYQRAKAMFTKSLELQPGYAPAF 465
Query: 216 GNLGIAYLQIGNLELSAKCFQELILKD 242
NLG+ ++ G LE + CF + + D
Sbjct: 466 NNLGLVFVAEGLLEEAKYCFDKALQSD 546
>TC207490 weakly similar to UP|Q94AA8 (Q94AA8) AT5g63200/MDC12_17, partial
(32%)
Length = 517
Score = 293 bits (750), Expect = 1e-79
Identities = 142/171 (83%), Positives = 158/171 (92%)
Frame = +2
Query: 350 ERSQDPSELLSFGGNEMASIIRDGDSSLVELPTAWAGLAMVHKAQHEISSAYESEQHVLT 409
ERSQDPSELLS GNEMASIIRDGDSSLVE+P AW+GLAMVHKAQHEI++AYESEQ+ L
Sbjct: 5 ERSQDPSELLSCAGNEMASIIRDGDSSLVEIPIAWSGLAMVHKAQHEIAAAYESEQNGLR 184
Query: 410 EMEERAVCSLKQAVAEDPDDPVRWHQLGVHSLCTQQFKTSQKYLKAAVACDRGCSYTWSN 469
E+EERAVCSLKQA+AEDP+D V+WHQLG+HSLC +QFKTSQKYLKAAVACD+ CSY W+N
Sbjct: 185 EVEERAVCSLKQAIAEDPNDAVQWHQLGIHSLCARQFKTSQKYLKAAVACDKDCSYAWAN 364
Query: 470 LGVSLQLSEEPSQAEKAYKQALLLATKQQAHAILSNLGIFYRHEKKYQRAK 520
LGVSLQLSEEPSQAE+ YKQAL LAT QQAHAILSNLGI YRH+K+YQRAK
Sbjct: 365 LGVSLQLSEEPSQAEEVYKQALSLATTQQAHAILSNLGILYRHQKQYQRAK 517
>AI736725
Length = 410
Score = 141 bits (355), Expect = 9e-34
Identities = 76/97 (78%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Frame = +2
Query: 4 LTNDENSQDKSLLSKDTDSTEGEGKKSHKLGKCRSRPSKTDS-LDCGGDADVDQHVQGAP 62
L NDENSQDKS LSKDTDS E E KK +KL K RSR KTDS LD D D DQHVQG P
Sbjct: 125 LANDENSQDKSSLSKDTDSIEAESKKLNKLSKSRSR--KTDSSLDFVADVDGDQHVQGPP 298
Query: 63 SSREEKVSSMKTGLIHVARKMPKNAHAHFILGLMHQR 99
SSREEKVSS+KTGL+HVARKMPKNAHAHFILGLM+QR
Sbjct: 299 SSREEKVSSVKTGLVHVARKMPKNAHAHFILGLMYQR 409
>AW734141
Length = 175
Score = 63.9 bits (154), Expect = 2e-10
Identities = 29/39 (74%), Positives = 34/39 (86%)
Frame = +2
Query: 549 LLEEAKYCFEKALQSDPLLDAAKSNLVKVVTMSKICKGL 587
+L+ YCF+KALQSD LLDAAKSNL+KVV MSK+CKGL
Sbjct: 32 ILKRPNYCFDKALQSDSLLDAAKSNLIKVVAMSKLCKGL 148
>TC218328 similar to UP|Q84VX9 (Q84VX9) At4g08320, partial (32%)
Length = 1086
Score = 55.5 bits (132), Expect = 7e-08
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Frame = +3
Query: 447 KTSQKYLKAAVACDR-GC-SYTWSNLGVSLQLSEEPSQAEKAYKQALLL-----ATKQQA 499
K S + +A + +R GC ++ NL SL+ + K Y A+ L A +++
Sbjct: 90 KASCLFNEACMELERSGCHQFSLKNLAESLKTLGNKAMQSKKYSDAIELYNCAIAVHEKS 269
Query: 500 HAILSNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKY-CFE 558
N Y KY A +S+E+ P Y+ A++ LGLV+ A+G +A + F
Sbjct: 270 AVYYCNRAAAYTQINKYTEAIQDCLRSIEIDPNYSKAYSRLGLVYYAQGNYRDAIHKGFR 449
Query: 559 KALQSDPLLDAAKSNL 574
KALQ DP ++ K N+
Sbjct: 450 KALQLDPNNESVKENI 497
>TC205633 similar to UP|O81280 (O81280) Peroxisomal targeting signal-1
receptor, partial (64%)
Length = 1643
Score = 46.6 bits (109), Expect = 3e-05
Identities = 28/101 (27%), Positives = 56/101 (54%)
Frame = +1
Query: 470 LGVSLQLSEEPSQAEKAYKQALLLATKQQAHAILSNLGIFYRHEKKYQRAKAMFTKSLEL 529
LGV LS E +A ++++AL L K Q +++ + LG + + A + ++L+L
Sbjct: 940 LGVMYNLSREYDKAIASFERALKL--KPQDYSLWNKLGATQANSVQSADAIMAYQQALDL 1113
Query: 530 QPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDAA 570
+P Y A+ N+G+ + +G+ +E+ + +AL +P + A
Sbjct: 1114 KPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKAENA 1236
Score = 34.3 bits (77), Expect = 0.16
Identities = 45/241 (18%), Positives = 93/241 (37%), Gaps = 15/241 (6%)
Frame = +1
Query: 273 EGALADQVMAANVAKECLLAAIKADVKSAHIWGNLAYAFSISGDHRSSSKCLEKAAKLEP 332
+G L++ V+A L A + + ++A W L A + + D + + + +A + +P
Sbjct: 562 KGLLSEAVLA-------LEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADP 720
Query: 333 NCMSTRYAVATHRMKEAERSQDPSELLSF----------GGNEMASIIRDGD-----SSL 377
+ A+ E E++ L + EMA + D +
Sbjct: 721 TNLEVLLALGVSHTNELEQTAALKYLYGWLRHHPKYGTLAPPEMADSLYYADVARLFNDA 900
Query: 378 VELPTAWAGLAMVHKAQHEISSAYESEQHVLTEMEERAVCSLKQAVAEDPDDPVRWHQLG 437
EL A + +V + +S Y+ +A+ S ++A+ P D W++LG
Sbjct: 901 AELSPDDADVHIVLGVMYNLSREYD-----------KAIASFERALKLKPQDYSLWNKLG 1047
Query: 438 VHSLCTQQFKTSQKYLKAAVACDRGCSYTWSNLGVSLQLSEEPSQAEKAYKQALLLATKQ 497
+ Q + + A+ W+N+G+S ++ + Y +AL + K
Sbjct: 1048ATQANSVQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKA 1227
Query: 498 Q 498
+
Sbjct: 1228E 1230
>TC215378 similar to UP|Q94EJ1 (Q94EJ1) At1g22700/T22J18_13, partial (55%)
Length = 807
Score = 45.4 bits (106), Expect = 7e-05
Identities = 23/64 (35%), Positives = 36/64 (55%)
Frame = +3
Query: 502 ILSNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKAL 561
+ + LG+ Y + K + A F +++LQPGY A+NNLG F ++ + A FE+ L
Sbjct: 243 VYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAFESKKDYKSALKAFEEVL 422
Query: 562 QSDP 565
DP
Sbjct: 423 LFDP 434
Score = 42.0 bits (97), Expect = 8e-04
Identities = 31/134 (23%), Positives = 61/134 (45%)
Frame = +3
Query: 115 EILLRPETEIERPDLLSLVQIHHAQCLILESSSENSSDKELEPHELKEILSKLKESVQFD 174
++L+R E ++ +L V+ A L ++ P K +L +++ +
Sbjct: 48 QVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDN 227
Query: 175 IRQAAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGNLELSAKC 234
A V+N LG ++ G+V I+ + + + P NLG A+ + + + K
Sbjct: 228 PDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAFESKKDYKSALKA 407
Query: 235 FQELILKDQNHPVA 248
F+E++L D N+ VA
Sbjct: 408 FEEVLLFDPNNKVA 449
Score = 29.3 bits (64), Expect = 5.1
Identities = 26/134 (19%), Positives = 55/134 (40%)
Frame = +3
Query: 359 LSFGGNEMASIIRDGDSSLVELPTAWAGLAMVHKAQHEISSAYESEQHVLTEMEERAVCS 418
L E+ +R GD+ EL G M+ + + ++ + + +
Sbjct: 69 LDLSAKELQEQVRSGDAGATELFEL--GAVMLRRKFYPAATKFLLQ-------------A 203
Query: 419 LKQAVAEDPDDPVRWHQLGVHSLCTQQFKTSQKYLKAAVACDRGCSYTWSNLGVSLQLSE 478
+++ ++PD ++ LGV + + + AV G W+NLG + + +
Sbjct: 204 IEKWDGDNPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAFESKK 383
Query: 479 EPSQAEKAYKQALL 492
+ A KA+++ LL
Sbjct: 384 DYKSALKAFEEVLL 425
Score = 28.5 bits (62), Expect = 8.7
Identities = 13/41 (31%), Positives = 19/41 (45%)
Frame = +3
Query: 293 AIKADVKSAHIWGNLAYAFSISGDHRSSSKCLEKAAKLEPN 333
A+K W NL AF D++S+ K E+ +PN
Sbjct: 315 AVKLQPGYVTAWNNLGDAFESKKDYKSALKAFEEVLLFDPN 437
>BQ299342 similar to GP|18139887|gb O-linked N-acetyl glucosamine transferase
{Arabidopsis thaliana}, partial (14%)
Length = 421
Score = 45.1 bits (105), Expect = 9e-05
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +3
Query: 451 KYLKAAVACDRGCSYTWSNLGVSLQLSEEPSQAEKAYKQALLLATKQ-QAHAILSNLGIF 509
+Y A+ + WSNL + ++A + +QAL + AH SNLG
Sbjct: 6 RYYLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAH---SNLGNL 176
Query: 510 YRHEKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDA 569
+ + Q A + + ++L +QP +A A++NL +F+ G A +++A++ P
Sbjct: 177 MKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPD 356
Query: 570 AKSNLVKV 577
A NL V
Sbjct: 357 AYLNLGNV 380
Score = 42.4 bits (98), Expect = 6e-04
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = +3
Query: 526 SLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDAAKSNLVKVVTMSKICK 585
++EL+P +A A++NL ++ +G L EA C +AL +PL+ A SNL ++ +
Sbjct: 21 AIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMK----AQ 188
Query: 586 GLLKE 590
GL++E
Sbjct: 189 GLVQE 203
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 468 SNLGVSLQLSEEPSQAEKAYKQALLLATKQQAHAIL-SNLGIFYRHEKKYQRAKAMFTKS 526
SNLG ++ +A Y +AL + Q AI SNL + + RA + ++
Sbjct: 159 SNLGNLMKAQGLVQEAYSCYLEALRI---QPTFAIAWSNLAGLFMESGDFNRALQYYKEA 329
Query: 527 LELQPGYAPAFNNLGLVFVAEGLLEEAKYC 556
++L+P + A+ NLG V+ A G+ +EA C
Sbjct: 330 VKLKPSFPDAYLNLGNVYKALGMPQEAIAC 419
Score = 36.6 bits (83), Expect = 0.032
Identities = 31/129 (24%), Positives = 54/129 (41%)
Frame = +3
Query: 205 LAIAPENYDCLGNLGIAYLQIGNLELSAKCFQELILKDQNHPVALVNYAALLLCKYASVV 264
+ + P D NL AY++ G L +A+C ++ + + A N L+
Sbjct: 24 IELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLM-------- 179
Query: 265 AGAGASASEGALADQVMAANVAKECLLAAIKADVKSAHIWGNLAYAFSISGDHRSSSKCL 324
++G + + A C L A++ A W NLA F SGD + +
Sbjct: 180 ------KAQGLVQE-------AYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYY 320
Query: 325 EKAAKLEPN 333
++A KL+P+
Sbjct: 321 KEAVKLKPS 347
Score = 33.1 bits (74), Expect = 0.35
Identities = 21/80 (26%), Positives = 32/80 (39%)
Frame = +3
Query: 178 AAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGNLELSAKCFQE 237
A W+ L ++ GR+ A LAI P D NLG G ++ + C+ E
Sbjct: 45 ADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLE 224
Query: 238 LILKDQNHPVALVNYAALLL 257
+ +A N A L +
Sbjct: 225 ALRIQPTFAIAWSNLAGLFM 284
>TC205632 similar to UP|O82444 (O82444) Peroxisomal targeting sequence 1
receptor (Fragment), partial (24%)
Length = 707
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/100 (26%), Positives = 53/100 (53%)
Frame = +2
Query: 471 GVSLQLSEEPSQAEKAYKQALLLATKQQAHAILSNLGIFYRHEKKYQRAKAMFTKSLELQ 530
GV S E A ++++AL L K Q +++ + LG + + A + ++L+L+
Sbjct: 2 GVMYXXSREYDXAXXSFERALKL--KPQDYSLWNKLGATQANSVQSADAIMAYQQALDLK 175
Query: 531 PGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDAA 570
P Y A+ N+G+ + +G+ +E+ + +AL +P + A
Sbjct: 176 PNYVRAWANMGISYANQGMYDESVRYYVRALAMNPKAENA 295
>TC231862 similar to GB|AAL60196.1|18139887|AF441079 O-linked N-acetyl
glucosamine transferase {Arabidopsis thaliana;} ,
partial (25%)
Length = 750
Score = 38.1 bits (87), Expect = 0.011
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 187 ILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGNLELSAKCFQELILKDQNHP 246
I + G++ AI +A P + NLG A +G +E + +C+ + + NHP
Sbjct: 6 IYYEQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPNHP 185
Query: 247 VALVN 251
AL N
Sbjct: 186 QALTN 200
Score = 35.4 bits (80), Expect = 0.071
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 156 EPHELKEILSKLKESVQFDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCL 215
E +L + K++V D R +N LG L GRV+ AI + L + P + L
Sbjct: 15 EQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPNHPQAL 194
Query: 216 GNLG 219
NLG
Sbjct: 195 TNLG 206
Score = 33.9 bits (76), Expect = 0.21
Identities = 19/69 (27%), Positives = 32/69 (45%)
Frame = +3
Query: 510 YRHEKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPLLDA 569
Y + + A + +++ P + A+NNLG G +EEA C+ + L P
Sbjct: 9 YYEQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPNHPQ 188
Query: 570 AKSNLVKVV 578
A +NL K +
Sbjct: 189 ALTNLGKYI 215
Score = 31.6 bits (70), Expect(2) = 0.002
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 519 AKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQSDPL 566
A + +L + G + +NNL +++ +G +A C+ + L+ DPL
Sbjct: 241 AAQYYKATLNVTTGLSAPYNNLAIIYKQQGNYVDAISCYNEVLRIDPL 384
Score = 27.7 bits (60), Expect(2) = 0.002
Identities = 19/56 (33%), Positives = 27/56 (47%)
Frame = +3
Query: 452 YLKAAVACDRGCSYTWSNLGVSLQLSEEPSQAEKAYKQALLLATKQQAHAILSNLG 507
+ K AVACD ++NLG +L+ +A + Y Q L L L+NLG
Sbjct: 45 HYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPNHP--QALTNLG 206
>TC220196 similar to GB|AAO63361.1|28950875|BT005297 At5g48850 {Arabidopsis
thaliana;} , partial (65%)
Length = 1185
Score = 38.1 bits (87), Expect = 0.011
Identities = 21/84 (25%), Positives = 42/84 (50%)
Frame = +3
Query: 481 SQAEKAYKQALLLATKQQAHAILSNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPAFNNL 540
++ +++ + ++ KQ+ +L NLG Y + Y A+ ++ K+ + P A N L
Sbjct: 522 TKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYMMAEVVYRKAQIIDPDCNKACN-L 698
Query: 541 GLVFVAEGLLEEAKYCFEKALQSD 564
GL + + EEA+ E L+ +
Sbjct: 699 GLCLIRQARYEEAQLVLEDVLKGN 770
>TC210267 similar to UP|Q8LGU6 (Q8LGU6) HOBBIT protein, partial (39%)
Length = 1273
Score = 38.1 bits (87), Expect = 0.011
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Frame = +3
Query: 420 KQAVAEDPDDPVRWHQLGVHSLCTQQFKTSQKYLKAAVACDRGCSYTWSNLGVSLQLSEE 479
++ V+ D P W +G + +T+ K + AV + +Y + G E+
Sbjct: 171 QELVSTDRLAPQSWCAMGNCYSLQKDHETALKNFQRAVQLNPRFAYAHTLCGHEYVALED 350
Query: 480 PSQAEKAYKQALLLATKQQAHAILSNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPAFNN 539
K Y+ AL + + + LG+ Y ++K++ ++ F + + P + +
Sbjct: 351 FENGIKCYQSALRVDARH--YNAWYGLGMVYLRQEKFEFSEHHFRMAFHINPRSSVIMSY 524
Query: 540 LGLVFVAEGLLEEAKYCFEKALQSD---PLLDAAKSNLV 575
LG A EEA EKA+ +D PL K+N++
Sbjct: 525 LGTALHALKRSEEALMVMEKAILADKKNPLPMYQKANIL 641
>TC210367 similar to UP|Q8GZN1 (Q8GZN1) Pollen-specific calmodulin-binding
protein, partial (8%)
Length = 610
Score = 36.2 bits (82), Expect = 0.042
Identities = 21/66 (31%), Positives = 34/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 184 LGFILLKTGRVQSAI--SVLSSLLAIAPENYDCLGNLGIAYLQIGNLELSAKCFQELILK 241
+G ++ K G AI S+LS L I P N NLG+ + G + +A CFQ +
Sbjct: 117 MGALIQKLGTKHLAIARSLLSDALRIEPTNRKAWYNLGLLHKHEGRISDAADCFQAASML 296
Query: 242 DQNHPV 247
+++ P+
Sbjct: 297 EESDPI 314
Score = 34.3 bits (77), Expect = 0.16
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +3
Query: 471 GVSLQLSEEPSQAEKAYKQALLLATKQQAHAILSNLGIFYRHEKKYQRAKAMFTKSLELQ 530
GV + + +A A A+LL IL I K A+++ + +L ++
Sbjct: 18 GVLFEGRGQNEEALCATINAILLEPNYVPCKILMGALIQKLGTKHLAIARSLLSDALRIE 197
Query: 531 PGYAPAFNNLGLVFVAEGLLEEAKYCFEKAL---QSDPL 566
P A+ NLGL+ EG + +A CF+ A +SDP+
Sbjct: 198 PTNRKAWYNLGLLHKHEGRISDAADCFQAASMLEESDPI 314
>AW308911 similar to GP|19913115|em SPY protein {Lycopersicon esculentum},
partial (15%)
Length = 444
Score = 33.5 bits (75), Expect = 0.27
Identities = 19/68 (27%), Positives = 39/68 (56%), Gaps = 5/68 (7%)
Frame = +1
Query: 482 QAEKAYKQALLLATKQQAHA-----ILSNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPA 536
+A ++Y++AL + +A A +L+++G + Q + ++L++ P YAPA
Sbjct: 229 EAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQDGIQKYFEALKVDPHYAPA 408
Query: 537 FNNLGLVF 544
+ NLG+V+
Sbjct: 409 YYNLGVVY 432
>TC209590 similar to GB|AAP13360.1|30023654|BT006252 At4g30480 {Arabidopsis
thaliana;} , partial (22%)
Length = 848
Score = 33.5 bits (75), Expect = 0.27
Identities = 22/78 (28%), Positives = 36/78 (45%)
Frame = +3
Query: 504 SNLGIFYRHEKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQS 563
SN G+ + +KY TK+LEL P Y A G ++A +K L+
Sbjct: 3 SNRGVCFLKLEKYDNTIKECTKALELNPVYVKALVRRGEAHEKLEHFDKAIDDMKKILEI 182
Query: 564 DPLLDAAKSNLVKVVTMS 581
DP D A+ + ++ T++
Sbjct: 183 DPSNDQARKTIRRLETLA 236
>BQ454144 weakly similar to GP|9802536|gb| F17L21.25 {Arabidopsis thaliana},
partial (15%)
Length = 424
Score = 33.1 bits (74), Expect = 0.35
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 519 AKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALQ 562
A++ +L L P A+ NLGLV EG L++A CF+ A +
Sbjct: 193 ARSFLMNALRLDPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYE 324
Score = 32.7 bits (73), Expect = 0.46
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 186 FILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGNLELSAKCFQ 236
F+ L + A S L + L + P N+D NLG+ G+L+ +A CFQ
Sbjct: 160 FLKLGIPSLPIARSFLMNALRLDPTNHDAWFNLGLVSKMEGSLQQAADCFQ 312
>TC233446 similar to UP|Q6K715 (Q6K715) Kinesin light chain-like, partial
(22%)
Length = 698
Score = 32.3 bits (72), Expect = 0.60
Identities = 20/60 (33%), Positives = 33/60 (54%), Gaps = 8/60 (13%)
Frame = +1
Query: 184 LGFILLKTGRVQSAISVLSSLL-----AIAPENYDC---LGNLGIAYLQIGNLELSAKCF 235
+G++LL TG+VQ AI L S + P+++ NLG AYL++ + +A+ F
Sbjct: 25 IGWLLLLTGKVQQAIPYLESAAERLKDSFGPKHFGVGYIYNNLGAAYLELDRPQSAAQMF 204
>TC220511
Length = 590
Score = 30.8 bits (68), Expect = 1.8
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 82 KMPKNAHAHFILGLMHQRLNQPQKAILVYEKAEEILLRPETEIERPDL-LSLVQIHHAQC 140
K KN H H +G +H +QP +++L T E DL +S +Q+HH C
Sbjct: 507 KCKKNIH*HNFIGRLHHCTSQPSRSVLRI-----------TNQETSDLGISYIQMHHP*C 361
>TC222841
Length = 629
Score = 30.8 bits (68), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 11 QDKSLLSKDTDSTEGEGKKSHK-LGKCRSRPSKTD----SLDCGGDADVDQHVQGAPSSR 65
QD+SLLS + S + E KSH+ CR+ SKTD + G D H A
Sbjct: 32 QDQSLLS--SQSMQDELGKSHEPRSDCRTNRSKTDLLREKMPSGLDISERNHEYSANKLS 205
Query: 66 EEKVSSMKTGLI 77
E SS + GL+
Sbjct: 206 ESVASSHRHGLL 241
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,557,793
Number of Sequences: 63676
Number of extensions: 323986
Number of successful extensions: 1630
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of query: 590
length of database: 12,639,632
effective HSP length: 103
effective length of query: 487
effective length of database: 6,081,004
effective search space: 2961448948
effective search space used: 2961448948
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0174.1