BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0157a.4
(594 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23... 358 4e-99
TC213886 220 2e-57
TC232728 207 1e-53
TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl... 189 3e-48
TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%) 181 1e-45
TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl... 177 9e-45
TC217866 172 4e-43
TC230833 169 3e-42
TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl... 131 1e-30
TC208694 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (26%) 126 3e-29
TC231995 similar to GB|BAB11327.1|10177916|AB016886 photorecepto... 120 2e-27
TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl... 117 1e-26
BI497474 similar to GP|15451228|gb| photoreceptor-interacting pr... 108 7e-24
TC224395 similar to UP|Q9SA69 (Q9SA69) F10O3.17, partial (29%) 104 1e-22
TC223643 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting... 104 1e-22
BG652049 similar to PIR|G86160|G86 protein F10O3.17 [imported] -... 102 4e-22
TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%) 87 2e-17
TC208469 weakly similar to UP|Q9LIF0 (Q9LIF0) Similarity to phot... 87 2e-17
TC210611 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting... 84 1e-16
TC208784 similar to UP|Q9FYC8 (Q9FYC8) Non-phototropic hypocotyl... 78 1e-14
>TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23, partial
(16%)
Length = 1114
Score = 358 bits (919), Expect = 4e-99
Identities = 194/290 (66%), Positives = 228/290 (77%)
Frame = +1
Query: 305 VLDDLLIPSYSFPGNTLFDVDTVQRIVVSYLEFEIGNHSVSSADDEYFSPSQRGIVRVGK 364
VLDDLLIPSYSF G+TLFDVDTVQRI+ +YLE + GNH V +ADDEYFSP Q + RVGK
Sbjct: 1 VLDDLLIPSYSFTGDTLFDVDTVQRIMSNYLESQTGNHLVFNADDEYFSPPQSDMERVGK 180
Query: 365 LMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNV 424
LMENY+AEIA DRNL +KF S+AELIPEQS PTEDG YRAIDI+LKAHP LS+M++K V
Sbjct: 181 LMENYIAEIATDRNLAVTKFTSLAELIPEQSRPTEDGMYRAIDIFLKAHPALSDMDRKKV 360
Query: 425 CSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVNWDGTSIPDKLN 484
CSVM CQKLSR+A AHAAQNDRLPVQTV+QVL ++Q+ LR MN G +S+ KLN
Sbjct: 361 CSVMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQRLRNAMN--GSRSGESSVDSKLN 534
Query: 485 VYSAELNPVSKVISNLRRENEELKREIVKLKMKLQEIEKPAHESSAPSSPLISAYSPSVN 544
VYS +L+PVS +S LRRENE+LK E+VKLKM+L+EIE +S+ +SP +SA SPS +
Sbjct: 535 VYSTDLHPVSNELSTLRRENEDLKLELVKLKMRLKEIENSTLKSTV-NSPAVSA-SPSAD 708
Query: 545 KPPLPRKSFMKSVSRKLGRLYPFSRAAADTVTTPFKDRLKPEKKIRHSIS 594
KPPLPR+SFM SVS+KLGRL PF R AD V K R KP K RHSIS
Sbjct: 709 KPPLPRRSFMSSVSKKLGRLSPFVR--ADGVLPFPKGRTKPNKNRRHSIS 852
>TC213886
Length = 718
Score = 220 bits (560), Expect = 2e-57
Identities = 112/148 (75%), Positives = 124/148 (83%)
Frame = +2
Query: 85 LRCVAEYLEMTEDNSIGNLVGRSDFYLNEVALETISGAVSVLHMPETLLQVAEKAKLVNR 144
LRCVAEY MTED S+GNLVGR D YLNEVAL+TISGAVS+LHM E L +AEKAKLV+R
Sbjct: 272 LRCVAEYFGMTEDYSVGNLVGRVDSYLNEVALKTISGAVSILHMSERFLPIAEKAKLVSR 451
Query: 145 CIDAIAYMASKQSQLCSPARSQCSSDGVMSSSMASHRRPVVHWWGEDLTVLRIDIFQRVL 204
CIDAIA++ASK++Q CSP R D + + MASH+RPVVHWW EDLTVLRIDIFQRVL
Sbjct: 452 CIDAIAFIASKETQFCSPMR----GDIIGTDGMASHQRPVVHWWAEDLTVLRIDIFQRVL 619
Query: 205 IAMMGRGFKQFDLGPIIMLYAQKSLEGL 232
IAMM RGFKQF LGPIIMLYAQKSL GL
Sbjct: 620 IAMMARGFKQFALGPIIMLYAQKSLRGL 703
>TC232728
Length = 807
Score = 207 bits (527), Expect = 1e-53
Identities = 117/184 (63%), Positives = 139/184 (74%)
Frame = +2
Query: 411 KAHPFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDG 470
+AHP LS+MEKK VCSVM CQKLSR+A AHAAQNDRLPVQ V+QVL ++Q+ LR++M DG
Sbjct: 128 QAHPVLSDMEKKKVCSVMDCQKLSREACAHAAQNDRLPVQMVVQVLYYEQQRLRDSM-DG 304
Query: 471 GVNWDGTSIPDKLNVYSAELNPVSKVISNLRRENEELKREIVKLKMKLQEIEKPAHESSA 530
WD + DK+N ELN VS +S LRRENE+LK EIVKLKMKL+EIE+ + SA
Sbjct: 305 NAGWDSPNFRDKVNSSPNELNLVSNELSILRRENEDLKLEIVKLKMKLKEIERTSIR-SA 481
Query: 531 PSSPLISAYSPSVNKPPLPRKSFMKSVSRKLGRLYPFSRAAADTVTTPFKDRLKPEKKIR 590
SSP+I A SPS +KPPLPRKSF+ SVS+KLGRL PFSR A TT K +KP+K R
Sbjct: 482 SSSPVIFA-SPSADKPPLPRKSFINSVSKKLGRLSPFSRGNA--ATTLLKGHVKPDKNRR 652
Query: 591 HSIS 594
HSIS
Sbjct: 653 HSIS 664
>TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
(43%)
Length = 1457
Score = 189 bits (480), Expect = 3e-48
Identities = 116/309 (37%), Positives = 179/309 (57%), Gaps = 28/309 (9%)
Frame = +1
Query: 249 EKRVVVETLVSLLPREKNAMSVSSLSMLLRAAIYLETTVACRLDLEKRVAMQLGQAVLDD 308
E+R+++E+LVS++P +K+++S S L LLR AI L+ A +LEKRV MQ QA L D
Sbjct: 151 EQRMIIESLVSIIPPQKDSVSCSFLLRLLRMAIMLKVAPALVTELEKRVGMQFEQATLAD 330
Query: 309 LLIPSYSFPGNTLFDVDTVQRIVVSYL---EFEIGNHSVSSADDEYFSPSQRGI------ 359
LLIPSY+ G T++DVD VQR++ ++ + E + S +S D+ G+
Sbjct: 331 LLIPSYN-KGETMYDVDLVQRLLEHFIVQEQTESSSPSRNSFSDKQHMGMGMGMGCILNA 507
Query: 360 -VRVGKLMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSE 418
RV +L+++YL E++ DRNL +KF +AE +PE + +DG YRAID YLKAHP LSE
Sbjct: 508 KARVARLVDSYLTEVSRDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSE 687
Query: 419 MEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVN----- 473
E+K +C VM CQKLS DA HAAQN+RLP++ V+QVL +Q + + V
Sbjct: 688 HERKRLCRVMDCQKLSIDACLHAAQNERLPLRVVVQVLFAEQVKISNALASSSVKDVESE 867
Query: 474 -----------WDGT--SIPDKLNVYSAELNPVSKVISNLRRENEELKREIVKLKMKLQE 520
+GT S + ++N + + +++ + EL+ ++ L+ + +
Sbjct: 868 SHAMVTNRKTLLEGTPQSFQEGWTAAKKDINTLKFELESVKAKYMELQNDMASLQKQFDK 1047
Query: 521 IEKPAHESS 529
+ K H S+
Sbjct: 1048MLKQKHTSA 1074
>TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%)
Length = 1111
Score = 181 bits (458), Expect = 1e-45
Identities = 118/303 (38%), Positives = 173/303 (56%), Gaps = 2/303 (0%)
Frame = +3
Query: 294 EKRVAMQLGQAVLDDLLIPSYSFPGNTLFDVDTVQRIVVSYLEFEIGNHSVSSADDEYFS 353
EKRV L +DDLL+ ++S+ G L D+D+V+RI+ ++E E G +V +A +
Sbjct: 3 EKRVTEILEHVTVDDLLVLTFSYDGERLLDLDSVRRIISGFVEREKGT-TVFNAGVNFNE 179
Query: 354 PSQRGIVRVGKLMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAH 413
+ RV K +++YLAEIAA L SKF IA LIP+ + ++D YRA+DIYLK H
Sbjct: 180 DFSATMQRVAKTVDSYLAEIAAYAELSISKFNGIAILIPKGARKSDDDLYRAVDIYLKVH 359
Query: 414 PFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVN 473
P L E+EK+ VCSV+ KLS +AR HA++N RLP+Q VL L + Q +R
Sbjct: 360 PNLDEIEKEKVCSVLDTLKLSYEARVHASKNKRLPLQIVLHALYYDQLQIR--------- 512
Query: 474 WDGTSIPDKLNVYSAELNPVSKVISNLRRENEELKREIVKLKMKLQEIEKPAHESSAPSS 533
GT+ + V +AE + +S L RENEEL+ E++K+KM + +++K H +S+
Sbjct: 513 -SGTAADKQAVVAAAEKKQLQADVS-LVRENEELRSELMKMKMFISDLQKNVHGTSS--- 677
Query: 534 PLISAYSPSVNKPPLPRKSFMKSVSRKLGRLYPFSRAAADT--VTTPFKDRLKPEKKIRH 591
S N P + +F S+S+KL +L PF + DT + D KP K+ R
Sbjct: 678 ------SGRENIGPTKKPTFFSSMSKKLSKLNPFKNGSKDTSHIDDAPVDLTKPRKR-RF 836
Query: 592 SIS 594
SIS
Sbjct: 837 SIS 845
>TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl-like
protein, partial (63%)
Length = 972
Score = 177 bits (450), Expect = 9e-45
Identities = 118/342 (34%), Positives = 182/342 (52%), Gaps = 7/342 (2%)
Frame = +3
Query: 188 WGEDLTVLRIDIFQRVLIAMMGRGFKQFDLGPIIMLYAQKSLEGLEIFGKGRKELEPQHE 247
W +D ++ +D + L ++ +G + +G II YA L L + Q
Sbjct: 6 WFDDACIVDMDYLVKTLSSIKQKGVRADLIGSIITHYASIWLPDLSSSAENGVTTHFQSP 185
Query: 248 H-------EKRVVVETLVSLLPREKNAMSVSSLSMLLRAAIYLETTVACRLDLEKRVAMQ 300
+KR VETLVS+LP EK+++ + L LLR A + R +LE R++ Q
Sbjct: 186 ESVTNSWMKKRFFVETLVSVLPPEKDSVPCNFLLRLLRTANMVRVDATYRGELENRISWQ 365
Query: 301 LGQAVLDDLLIPSYSFPGNTLFDVDTVQRIVVSYLEFEIGNHSVSSADDEYFSPSQRGIV 360
L QA L +L+IPS+S TL DV+ V R+V ++ + + +V
Sbjct: 366 LDQASLKELMIPSFSHTCGTLLDVELVLRLVKRFMSLDRDGAA---------------LV 500
Query: 361 RVGKLMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEME 420
+V KL++ YLAE A D NL S+FI++A +P S T+DG YRAID YLKAHP +S+ E
Sbjct: 501 KVAKLVDCYLAEAAVDANLTLSEFIALAGALPSHSRATDDGLYRAIDTYLKAHPDVSKQE 680
Query: 421 KKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVNWDGTSIP 480
+K +C ++ +KL+ +A HAAQN+RLPV+ V+QVL +Q L ++W G+
Sbjct: 681 RKGLCRLLDSRKLTTEASLHAAQNERLPVRAVIQVLFSEQTKLNR-----HIDWSGSF-- 839
Query: 481 DKLNVYSAELNPVSKVISNLRRENEELKREIVKLKMKLQEIE 522
L + L+P + +S +RE + EI KLK + ++
Sbjct: 840 SSLRSPNGGLDPPGRCLS--KRETNAQQMEIRKLKEDVYRLQ 959
>TC217866
Length = 1362
Score = 172 bits (436), Expect = 4e-43
Identities = 132/381 (34%), Positives = 204/381 (52%), Gaps = 21/381 (5%)
Frame = +2
Query: 235 FGKGRKELEPQHEHEKRVVVETLVSLLPREKNAMSVSSLSMLLRAAIYLETTVACRLDLE 294
F KG + +H R++VET+V LLP EK ++ L LL+AAI++E+ + +L
Sbjct: 8 FSKGMIQCGDVSKH--RLIVETIVWLLPTEKGSVPCRFLLKLLKAAIFVESGDRTKEELV 181
Query: 295 KRVAMQLGQAVLDDLLIPSYSFPGNTLFDVDTVQRIVVSYLEFEIGNHSVSSAD-DEYFS 353
KR+ QL +A + D+LI + G T++DV VQ IV + + GN + S DE
Sbjct: 182 KRIGQQLEEASVSDILIQAPD--GATIYDVSIVQNIVREFF-MKNGNAEIESVGGDELEG 352
Query: 354 PSQRGIVR------VGKLMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAID 407
+ GI+ V KL++ YLAEIA D NLP +F+++AEL+ S P DG YRAID
Sbjct: 353 IRKPGILSDASKLMVAKLIDEYLAEIAKDPNLPLPEFVNLAELVSSISRPAHDGLYRAID 532
Query: 408 IYLKAHPFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETM 467
YLK HP +++ EKK +C +M C+KLS DA HA QN+RLP++ V+QVL F+Q LR
Sbjct: 533 TYLKEHPAINKGEKKRICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQ--LRTAA 706
Query: 468 NDGGVNWDGTSIPDKLNVYSAELNPVSKVISNLRRENEELKREIV----KLKMKLQEIEK 523
+ GTS PD + +LN S S N E + + V +LK +E+
Sbjct: 707 S------SGTSTPD-IPRGIKDLNNESNGSSRSGTTNPEDELDAVATAEELKALRKELAS 865
Query: 524 PAHESSAPSSPLISAYSPSVNKPPL--------PRKSFMKSVSRKLGRLYPFSRAAADTV 575
+ ++ PS++K + +KSF+K + K G+ +++++
Sbjct: 866 LRLSNGVGNNDKDGDNKPSMDKAVMSKVKGLLKSKKSFIKIWASKGGQGENSGSDSSESM 1045
Query: 576 TT--PFKDRLKPEKKIRHSIS 594
++ P + + P + RHS+S
Sbjct: 1046SSANPEEAKSTPSRNRRHSVS 1108
>TC230833
Length = 732
Score = 169 bits (428), Expect = 3e-42
Identities = 91/192 (47%), Positives = 129/192 (66%), Gaps = 4/192 (2%)
Frame = +1
Query: 280 AIYLETTVACRLDLEKRVAMQLGQAVLDDLLIPSYSFPGNTLFDVDTVQRIVVSYLEFE- 338
A+ L + +C +LEKR+ MQL QA L+ LL+P++S+ TL++VD VQRI+ +L +
Sbjct: 13 AMILRVSPSCISNLEKRIGMQLDQATLEGLLMPNFSYSMETLYNVDCVQRILDHFLAMDQ 192
Query: 339 -IGNHSVSSADDEYF--SPSQRGIVRVGKLMENYLAEIAADRNLPASKFISIAELIPEQS 395
G S S DD SPS I V KL++ YLAE+A D NL KF ++A +PE +
Sbjct: 193 VTGCASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYA 372
Query: 396 IPTEDGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQV 455
P +DG YRAIDIYLK+HP+L E E++ +C +M CQKLS +A HAAQN+RLP++ ++QV
Sbjct: 373 RPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQV 552
Query: 456 LSFQQKHLRETM 467
L F+Q LR ++
Sbjct: 553 LFFEQLQLRTSI 588
>TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl 3-like
protein, partial (31%)
Length = 897
Score = 131 bits (329), Expect = 1e-30
Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Frame = +2
Query: 320 TLFDVDTVQRIVVSYLEFEIGNHSVSSADDEYFSPSQRGIVRVGKLMENYLAEIAADRNL 379
T+ D+D VQRIV +L E + + + +L++NYLAEIA D NL
Sbjct: 56 TMLDIDVVQRIVEYFLMHE---------QQQIQQQQKTRKFNISRLLDNYLAEIARDPNL 208
Query: 380 PASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQKLSRDARA 439
+KF AEL+PE + +DG YRAID YLK P L+E ++K +C +M+C+KLS DA
Sbjct: 209 SITKFQVFAELLPENTRSYDDGLYRAIDTYLKTQPSLTEHDRKRLCKIMNCEKLSLDACL 388
Query: 440 HAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVNWDGTSIPDKLNVYSA--ELNPVSKVI 497
HAAQN+RLP++TV+Q+L +Q +R M++ G + N SA ++ + +
Sbjct: 389 HAAQNERLPLRTVVQILFSEQVKMRAAMHEKEPAQIGIQSEQEGNHTSATMDIKALKAEL 568
Query: 498 SNLRRENEELKREIVKLKMKLQEIEKPAHESS 529
N++ + EL+ + +L+ + +++ SS
Sbjct: 569 ENVKSQMVELQNDYCELQQEYEKLSNKPKNSS 664
>TC208694 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (26%)
Length = 600
Score = 126 bits (316), Expect = 3e-29
Identities = 84/217 (38%), Positives = 123/217 (55%), Gaps = 4/217 (1%)
Frame = +1
Query: 382 SKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQKLSRDARAHA 441
SKF IA LIP+ + +D YRA+DIYLKAHP L E+E++ VCSVM KLS +AR HA
Sbjct: 7 SKFNGIATLIPKNARKIDDDLYRAVDIYLKAHPQLDEIEREKVCSVMDPLKLSYEARVHA 186
Query: 442 AQNDRLPVQTVLQVLSFQQKHLRETMNDGGVNWDGTSIPDKLNVYSAELNPVSKVISNLR 501
+QN RLPVQ VL L + Q LR + V + E N + ++ L
Sbjct: 187 SQNKRLPVQIVLHALYYDQLRLRSGAEEREV--------------ATEKNQLQMDVT-LV 321
Query: 502 RENEELKREIVKLKMKLQEIEKPAHESSAPSSPLISAYSPSVNKPPLPRKSFMKSVSRKL 561
RENEEL+ E++K+KM + ++++ + ++ ++P + S P + +F SVS+ L
Sbjct: 322 RENEELRTELMKMKMYISDLQQNKNTNNG-ANPQGHGTTSSAANPNPKKATFFSSVSKTL 498
Query: 562 GRLYPFSRAAADTVTTPFKDR----LKPEKKIRHSIS 594
G+L P+ + D TT +DR KP +K R S+S
Sbjct: 499 GKLNPYRNGSKD--TTHLEDRNVDFTKPRRK-RISVS 600
>TC231995 similar to GB|BAB11327.1|10177916|AB016886
photoreceptor-interacting protein-like {Arabidopsis
thaliana;} , partial (19%)
Length = 918
Score = 120 bits (301), Expect = 2e-27
Identities = 68/160 (42%), Positives = 101/160 (62%), Gaps = 1/160 (0%)
Frame = +2
Query: 308 DLLIPSYSFPGNTLFDVDTVQRIVVSYLEFEIGNHSVSSADDEYFSPSQRGIVRVGKLME 367
DLL PS S + +D + V ++ SYL+F S + D + S R VGKL++
Sbjct: 5 DLLYPSTSPLDHNFYDTELVLAVLESYLKFW-KRISPGAVDKRHLIKSIRS---VGKLID 172
Query: 368 NYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNVCSV 427
+YL +A D N+P SKF+S+AE +P D Y+AI+IYLK HP LS+ +KK +C +
Sbjct: 173 SYLQVVARDDNMPVSKFVSLAETVPAIGRL*HDDLYQAINIYLKVHPDLSKADKKRLCGI 352
Query: 428 MHCQKLSRDARAHAAQNDRLPVQTVLQVLSF-QQKHLRET 466
+ CQKL+ + RAHA +N+ LP++TV+Q+L F Q+K +ET
Sbjct: 353 LECQKLTPEVRAHAVKNEFLPLRTVVQLLYFEQEKDSKET 472
>TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
(26%)
Length = 944
Score = 117 bits (294), Expect = 1e-26
Identities = 65/172 (37%), Positives = 104/172 (59%), Gaps = 13/172 (7%)
Frame = +1
Query: 365 LMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNV 424
L+++YL E++ DRNL +KF ++E +PE + ++DG YRAID YLKAHP L+E E+K +
Sbjct: 10 LVDSYLTEVSRDRNLSLTKFQVLSEALPESARTSDDGLYRAIDSYLKAHPTLTEHERKRL 189
Query: 425 CSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVNWDGTS------ 478
C VM CQKLS DA HAAQN+RLP++ V+QVL +Q + + + G +G
Sbjct: 190 CRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFSEQVKISNALANNGSLKEGAESHYQPM 369
Query: 479 IPDKLNV-------YSAELNPVSKVISNLRRENEELKREIVKLKMKLQEIEK 523
IP++ + + K I+ L+ E E +K + ++L+ ++ ++K
Sbjct: 370 IPNRKTLLEGTPQSFQEGWTAAKKDINTLKFELETVKTKYLELQNDMENLQK 525
>BI497474 similar to GP|15451228|gb| photoreceptor-interacting protein-like
{Arabidopsis thaliana}, partial (16%)
Length = 426
Score = 108 bits (270), Expect = 7e-24
Identities = 57/133 (42%), Positives = 85/133 (63%), Gaps = 6/133 (4%)
Frame = +3
Query: 318 GNTLFDVDTVQRIVVSYLEFEIGNHSVSSADDEYFSPSQRGIV------RVGKLMENYLA 371
G+T+F VD VQR+V ++ + S +DE+ G+V +V KL++ YLA
Sbjct: 27 GDTIFYVDIVQRLVEEFVACGQQVQTDSLLEDEFQEIRSPGMVSDPSKAKVAKLVDGYLA 206
Query: 372 EIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQ 431
EIA D NLP +KF+++AEL+ + + DG YRAID+YLK HP +S+ E+K +C +M+C+
Sbjct: 207 EIARDPNLPLAKFVNLAELVSSFTRASHDGLYRAIDMYLKEHPGISKSERKKICRLMNCR 386
Query: 432 KLSRDARAHAAQN 444
LS +A HA QN
Sbjct: 387 NLSAEACMHAVQN 425
>TC224395 similar to UP|Q9SA69 (Q9SA69) F10O3.17, partial (29%)
Length = 855
Score = 104 bits (259), Expect = 1e-22
Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Frame = +2
Query: 400 DGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQ 459
DG YRA+D K HP + E+ +C + CQKLS++A +HAAQN+RLPVQ V+QVL F+
Sbjct: 23 DGLYRAVDXXXKVHPNMKXXERNRLCKTIDCQKLSQEACSHAAQNERLPVQMVVQVLYFE 202
Query: 460 QKHLRETMNDGGVNWDGTSIPDK--LNVYSAELNPVSKVISNLRRENEELKREIVKLKMK 517
Q LR MN G P + S ++P S +RREN ELK E+ +++M+
Sbjct: 203 QMRLRNAMNGGHNQLFFGQFPHRSGSGAGSGAISPRDNYAS-VRRENRELKLEVARMRMR 379
Query: 518 LQEIEKPAHESSAPSSPLISAYSPSVNKPPLPRKSFMKSVSRKLGRL 564
L ++EK + + L+ ++ P KS +RKL +L
Sbjct: 380 LTDLEK---DHVSMKQELVKSH---------PANKLFKSFTRKLSKL 484
>TC223643 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting
protein-like, partial (27%)
Length = 737
Score = 104 bits (259), Expect = 1e-22
Identities = 55/154 (35%), Positives = 95/154 (60%), Gaps = 3/154 (1%)
Frame = +3
Query: 373 IAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQK 432
IA D NL SKF +A +P+++ DG YRA+D+YLKAHP++S+ +++ +C+V+ CQK
Sbjct: 3 IATDANLKPSKFYDLAISVPDRARLFHDGLYRAVDVYLKAHPWVSKSDREKICAVLDCQK 182
Query: 433 LSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVNWDGTSIPDKLNVYSAELNP 492
L+ +A +HAAQN+RLP++ V++VL F+Q LR + P + + AE
Sbjct: 183 LTLEACSHAAQNERLPLRAVVRVLFFEQLQLRRAI---AGKLGAAEEPSRHSAAMAEEEE 353
Query: 493 VSKVISNLR---RENEELKREIVKLKMKLQEIEK 523
V + + REN+ L+ ++ ++ ++ E+E+
Sbjct: 354 VEDDNTTWQVTVRENQVLRLDMDSMRTRVHELER 455
>BG652049 similar to PIR|G86160|G86 protein F10O3.17 [imported] - Arabidopsis
thaliana, partial (21%)
Length = 427
Score = 102 bits (255), Expect = 4e-22
Identities = 57/139 (41%), Positives = 84/139 (60%), Gaps = 12/139 (8%)
Frame = +2
Query: 299 MQLGQAVLDDLLIPSYSFPGN--TLFDVDTVQRIVVSYLEFEIGNHSVSSA--------- 347
+QL QA+L+D+LIP+ S T++D D++ RI ++L + + +S
Sbjct: 5 LQLDQAILEDILIPTNSHQNTHGTIYDTDSILRIFSNFLNLDEEDEDDNSHLRDESEMVH 184
Query: 348 -DDEYFSPSQRGIVRVGKLMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAI 406
D SP Q I++V KLM+NYLAE+A D NL SKFIS+AEL+P+ + DG YRAI
Sbjct: 185 DFDSPGSPKQSSILKVSKLMDNYLAEVALDPNLLPSKFISLAELLPDHARIVSDGLYRAI 364
Query: 407 DIYLKAHPFLSEMEKKNVC 425
DI+LK HP + + + +C
Sbjct: 365 DIFLKVHPNIKDSXRYRLC 421
>TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%)
Length = 844
Score = 87.0 bits (214), Expect = 2e-17
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Frame = +1
Query: 76 NASFSLHKM--LRCVAEYLEMTEDNSIGNLVGRSDFYLNEVALETISGAVSVLHMPETLL 133
N ++H + LRC AE+L+MT+ NL GR++ +L +VA T++GAV+VL LL
Sbjct: 331 NFEITVHNVAVLRCAAEFLQMTDQYCENNLAGRTEEFLTQVAFFTLTGAVTVLKSCRHLL 510
Query: 134 QVAEKAKLVNRCIDAIAYMASKQSQLCSPARSQCSSDGVMSSSMASHRRPVVHWWGEDLT 193
A+ +V RC++A++ A ++ P+RS +WW E+L
Sbjct: 511 PYADDINVVKRCVEAVSAKACSEANF--PSRSP------------------PNWWTEELA 630
Query: 194 VLRIDIFQRVLIAMMGRGFKQFDLGPIIMLYAQKSLEGL--EIFGKGRKELEP---QHEH 248
+L ID F RV+ AM R K + ++ Y +++L L + G G + +P
Sbjct: 631 LLDIDFFARVIDAMKQRSAKALTVAAALITYTERALRDLVRDHTGNGIRSSDPGDSDSRS 810
Query: 249 EKRVVVETLV 258
++R ++E +V
Sbjct: 811 KQRKLLEAIV 840
>TC208469 weakly similar to UP|Q9LIF0 (Q9LIF0) Similarity to
photoreceptor-interacting transcription factor, partial
(20%)
Length = 847
Score = 87.0 bits (214), Expect = 2e-17
Identities = 52/174 (29%), Positives = 92/174 (51%), Gaps = 9/174 (5%)
Frame = +1
Query: 359 IVRVGKLMENYLAEIAADRNLPASKFISIAELIPEQSIPTEDGKYRAIDIYLKAHPFLSE 418
I +V L++ Y+AEIA D L SKF+++A IP+ + + D Y A+D+YL+ H LS+
Sbjct: 58 IRKVASLIDLYIAEIAPDPCLKTSKFLALATAIPDSARDSYDELYHAMDMYLEVHTQLSQ 237
Query: 419 MEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETM---------ND 469
E+ +C ++ +KLS A H +QN + P ++ +Q L QQ L+ + ND
Sbjct: 238 EERLKICCGLNFEKLSPQACLHLSQNKKFPSKSTVQALISQQSKLKNLLHVIPSTSSYND 417
Query: 470 GGVNWDGTSIPDKLNVYSAELNPVSKVISNLRRENEELKREIVKLKMKLQEIEK 523
N G + ++E + ++ +NE+LK + ++ ++ E+EK
Sbjct: 418 SPCNSSGAAAQKGKKNKTSEQVVLYSSNFDISTDNEKLKAHLQGMQWRVMELEK 579
>TC210611 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting
protein-like, partial (25%)
Length = 853
Score = 84.3 bits (207), Expect = 1e-16
Identities = 36/77 (46%), Positives = 59/77 (75%)
Frame = +1
Query: 391 IPEQSIPTEDGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQ 450
+P+++ +DG YRA+D+YLKAHP++ E E++ + ++ CQKL+ +A HAAQN+RLP++
Sbjct: 16 LPDEARLFDDGLYRAVDVYLKAHPWVLEEEREKISGLLDCQKLTLEACTHAAQNERLPLR 195
Query: 451 TVLQVLSFQQKHLRETM 467
V+QVL F+Q LR+ +
Sbjct: 196 AVVQVLFFEQLQLRQAI 246
>TC208784 similar to UP|Q9FYC8 (Q9FYC8) Non-phototropic hypocotyl 3-like
protein, partial (16%)
Length = 1068
Score = 77.8 bits (190), Expect = 1e-14
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Frame = +3
Query: 411 KAHPFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDG 470
+AHP+LS+ EK+ +C+++ QKLS A AHA+QNDRLP++ VLQVL F+Q HLR +
Sbjct: 3 QAHPWLSDREKEELCNIIDYQKLSIHACAHASQNDRLPLRVVLQVLFFEQLHLRTALTRC 182
Query: 471 GVNWDGTSIPDKLNVYSAELNPVSKVIS-----NLRRENEELKREIVKLKMKLQEIEKPA 525
DG P +A N +++ + REN+ LK ++ ++ ++ E+E+
Sbjct: 183 LNALDGEIAPAAPVPITALGNTAGEIVQRDGWVTVVRENQVLKVDMDRMSSRVGELEEEF 362
Query: 526 HESSAPSSPLISAYSPSVNKPPLPRKSFMKSVSR 559
+ + ++S + + RK K V R
Sbjct: 363 SKIKQEMKSVTKSHSSRSSPRLVARKIGCKLVPR 464
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,433,312
Number of Sequences: 63676
Number of extensions: 300798
Number of successful extensions: 1943
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of query: 594
length of database: 12,639,632
effective HSP length: 103
effective length of query: 491
effective length of database: 6,081,004
effective search space: 2985772964
effective search space used: 2985772964
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0157a.4