BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0150.12
(266 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC221058 similar to GB|AAS92332.1|46402460|BT012416 At3g08630 {A... 35 0.027
TC230232 similar to UP|Q8LAY3 (Q8LAY3) Inhibitor of apoptosis-li... 35 0.035
BI786400 33 0.10
TC224614 similar to UP|Q7XAS4 (Q7XAS4) Transaldolase, partial (83%) 33 0.13
TC215176 similar to GB|BAC42264.1|26450296|AK117608 GPI-anchored... 33 0.13
TC209938 similar to UP|Q84U29 (Q84U29) Zinc finger-like protein ... 33 0.17
TC228334 similar to UP|Q9SW80 (Q9SW80) Bel1-like homeodomain 2 (... 33 0.17
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 33 0.17
BE806061 similar to GP|21595125|gb endosperm-specific protein-li... 32 0.30
TC206957 weakly similar to UP|Q9LUI1 (Q9LUI1) Extensin protein-l... 32 0.30
TC204808 weakly similar to UP|HQGT_RAUSE (Q9AR73) Hydroquinone g... 32 0.30
BM121524 weakly similar to SP|Q9FPQ6|GP1_C Vegetative cell wall ... 32 0.39
TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g6... 32 0.39
BE210868 32 0.39
TC213186 similar to UP|Q70G58 (Q70G58) NADPH thioredoxin reducta... 32 0.39
TC219999 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (5%) 31 0.50
TC216566 similar to UP|Q8S9A1 (Q8S9A1) Glucosyltransferase-8 (Fr... 31 0.50
TC231014 weakly similar to GB|AAH39061.1|24657680|BC039061 LOC28... 31 0.50
TC223730 similar to UP|Q7SIC9 (Q7SIC9) Transferase, partial (29%) 31 0.50
TC225869 similar to UP|Q84P56 (Q84P56) TGB12K interacting protei... 31 0.66
>TC221058 similar to GB|AAS92332.1|46402460|BT012416 At3g08630 {Arabidopsis
thaliana;} , partial (45%)
Length = 774
Score = 35.4 bits (80), Expect = 0.027
Identities = 20/41 (48%), Positives = 23/41 (55%)
Frame = -2
Query: 43 NINDPLALSLSVEPVHTTPTYMNPFHVSLSPPSPPSTFEPP 83
N N A +L + P +T PT NP SLSPP PPS PP
Sbjct: 377 NGNCGSAATLDLHPFNTIPTTPNPTFFSLSPP-PPSESPPP 258
>TC230232 similar to UP|Q8LAY3 (Q8LAY3) Inhibitor of apoptosis-like protein,
partial (27%)
Length = 939
Score = 35.0 bits (79), Expect = 0.035
Identities = 24/72 (33%), Positives = 31/72 (42%), Gaps = 2/72 (2%)
Frame = -3
Query: 61 PTYMNPFHVSLSPPSPPSTF--EPPLASTNDSIDSSSSRRVRRRVEKSEIIPPPFPWATD 118
P Y +P L+ +PP F PP S + + S RR R + + PPPF A
Sbjct: 916 PPYPSPLRTPLTCANPPFPFLNRPPRCSRSRTRRRPSPRRRTRWRLRRRLPPPPFRRAAR 737
Query: 119 RRARVYTLSHLL 130
A YT H L
Sbjct: 736 EPALNYTAEHSL 701
>BI786400
Length = 367
Score = 33.5 bits (75), Expect = 0.10
Identities = 20/63 (31%), Positives = 30/63 (46%)
Frame = +1
Query: 50 LSLSVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEII 109
LS S+ P+ T PT + P +++P PP T PP + S ++RR S +
Sbjct: 124 LSPSLTPIGTAPTVLTPS--AITPSLPPLTLSPPFTPFRPTPLSLTNRRP*NANNSSLAL 297
Query: 110 PPP 112
P P
Sbjct: 298 PTP 306
>TC224614 similar to UP|Q7XAS4 (Q7XAS4) Transaldolase, partial (83%)
Length = 1403
Score = 33.1 bits (74), Expect = 0.13
Identities = 20/62 (32%), Positives = 31/62 (49%), Gaps = 4/62 (6%)
Frame = +1
Query: 53 SVEPVHTTPTYMNPFHVSLSPPSP----PSTFEPPLASTNDSIDSSSSRRVRRRVEKSEI 108
S P+H T T F SL PP+ P P + ++N SI+++S+ + SEI
Sbjct: 73 SASPIHRTITRYTTFSFSLRPPTTLHFNPHRSLPLIRASNSSINAASTTELDAVSAFSEI 252
Query: 109 IP 110
+P
Sbjct: 253 VP 258
>TC215176 similar to GB|BAC42264.1|26450296|AK117608 GPI-anchored protein
{Arabidopsis thaliana;} , partial (79%)
Length = 1570
Score = 33.1 bits (74), Expect = 0.13
Identities = 29/92 (31%), Positives = 36/92 (38%), Gaps = 16/92 (17%)
Frame = +1
Query: 52 LSVEPVHTTPTYMNPFHVSLSPPSP-------------PSTFEPPLASTNDSIDSSSS-- 96
L+ P T+ T ++P + PPSP P+T P AS+ S SSS
Sbjct: 472 LTTGPPTTSATALSPITACIWPPSPPAIEPSTPPRSSAPTTSSAPTASSTASSVSSSPDP 651
Query: 97 -RRVRRRVEKSEIIPPPFPWATDRRARVYTLS 127
RR S PP FP R V T S
Sbjct: 652 YRRTSTAAATSPPSPPSFPRERRRSIPVLTAS 747
>TC209938 similar to UP|Q84U29 (Q84U29) Zinc finger-like protein (Fragment),
partial (73%)
Length = 1104
Score = 32.7 bits (73), Expect = 0.17
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 9/113 (7%)
Frame = -1
Query: 19 SSSTKSHPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPT-YMNPFHVSLSPPSPP 77
SS T HP FL ++ L L+ + P H + Y NPF L P SP
Sbjct: 600 SSYTPQHPLFLLRL---------------LLLASHILPRHHHRSLYTNPFPALLPPASPS 466
Query: 78 STFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPP--------PFPWATDRRAR 122
+T +PP SRR RR + + +PP P W +R R
Sbjct: 465 ATRQPP--------PRGCSRR-RRSLRRLPPVPPVTRTARSVPNRWPLPQRRR 334
>TC228334 similar to UP|Q9SW80 (Q9SW80) Bel1-like homeodomain 2
(AT4g36870/C7A10_490), partial (9%)
Length = 910
Score = 32.7 bits (73), Expect = 0.17
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 31 QMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNPFHVSLSPPSPP-STFEPPLASTND 89
Q E+K+AE+ ++ N+ +S + TTP+ + PP PP +T P +D
Sbjct: 46 QQELKEAESAEDRENNNSNISGNQAQTPTTPSAATTSTATAPPPPPPTTTATKPTGKRSD 225
Query: 90 SIDSSSS 96
+I++ S
Sbjct: 226 AINAPDS 246
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 32.7 bits (73), Expect = 0.17
Identities = 28/87 (32%), Positives = 40/87 (45%)
Frame = -3
Query: 10 SSQLICSSISSSTKSHPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNPFHV 69
SS CSS SSS+ S S +E++ ++ P P T+P+ +
Sbjct: 567 SSSSPCSSSSSSSSS-----SSSSESSSESLSSSSGSP--------PRWTSPSSSSSSSS 427
Query: 70 SLSPPSPPSTFEPPLASTNDSIDSSSS 96
S SPPS S+ L+S + S SSSS
Sbjct: 426 SSSPPSGASSSSSSLSSPSSSSSSSSS 346
>BE806061 similar to GP|21595125|gb endosperm-specific protein-like protein
{Arabidopsis thaliana}, partial (26%)
Length = 355
Score = 32.0 bits (71), Expect = 0.30
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 56 PVHTTPTYMNPFHVSLSPPSP--PSTFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPPF 113
P +TP +P S +PPSP P P A T+ + SSS+ + +S P
Sbjct: 114 PAKSTPARPSPSSSSTTPPSPPWPQNTPSPSAKTSSASTSSSTTSTTQSSTRSPTAPRSP 293
Query: 114 PWAT 117
P +T
Sbjct: 294 PLST 305
Score = 28.5 bits (62), Expect = 3.3
Identities = 20/55 (36%), Positives = 21/55 (37%), Gaps = 11/55 (20%)
Frame = +3
Query: 72 SPPSPPS----TFEPPLASTNDSIDSS-------SSRRVRRRVEKSEIIPPPFPW 115
SPP PP TF PP +T S SS S R S PP PW
Sbjct: 18 SPPPPPPTISPTFSPPTPTTATSTASSPKPASPAKSTPARPSPSSSSTTPPSPPW 182
>TC206957 weakly similar to UP|Q9LUI1 (Q9LUI1) Extensin protein-like, partial
(7%)
Length = 595
Score = 32.0 bits (71), Expect = 0.30
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +2
Query: 53 SVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPP 112
S P HTT +Y P PP PP T PP +S + SS + S PPP
Sbjct: 170 SATPYHTTGSYSYP------PPPPPPTAYPPYSSHSSPYPPSS-----YPPQPSSYPPPP 316
Query: 113 FP 114
P
Sbjct: 317 PP 322
>TC204808 weakly similar to UP|HQGT_RAUSE (Q9AR73) Hydroquinone
glucosyltransferase (Arbutin synthase) , partial (25%)
Length = 431
Score = 32.0 bits (71), Expect = 0.30
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 47 PLALSLSVEPV-HTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEK 105
P + S S P T+P P S +PP PPS+ P + + S S+SS R R
Sbjct: 78 PPSSSTSSPPTPSTSPPNSMPPPTSSTPPQPPSSPSPSTSPPSTSRSSASSETSRNRSPI 257
Query: 106 SEIIPPP 112
IP P
Sbjct: 258 PGCIPLP 278
>BM121524 weakly similar to SP|Q9FPQ6|GP1_C Vegetative cell wall protein gp1
precursor (Hydroxyproline-rich glycoprotein 1)., partial
(10%)
Length = 875
Score = 31.6 bits (70), Expect = 0.39
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 NDPLALSLSVEPVHTTPTYMNPFHVSLSPPSPPS-TFEPPLASTNDSIDSSSSRRVRRRV 103
+ P + S + P P+ +P SPPS PS PPL SSS+R +
Sbjct: 297 HSPPSSSAASSPSPPAPSSSSPSPTPSSPPS*PSPAASPPLTPPTHFTASSSTRALPSPN 476
Query: 104 EKSEIIPPPFP 114
++ + PP P
Sbjct: 477 SRASVTPPSPP 509
>TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g61870
{Arabidopsis thaliana;} , partial (56%)
Length = 1291
Score = 31.6 bits (70), Expect = 0.39
Identities = 16/44 (36%), Positives = 22/44 (49%), Gaps = 2/44 (4%)
Frame = +1
Query: 73 PPSPPSTFEPPLASTND--SIDSSSSRRVRRRVEKSEIIPPPFP 114
PPS P T PP + + +SS+RR R + +PPP P
Sbjct: 64 PPSSPRTHPPP*PQSKKPAAPSTSSNRRPTRSASSTSAVPPPSP 195
>BE210868
Length = 324
Score = 31.6 bits (70), Expect = 0.39
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 29 LSQMEMKKAENVKNNINDPLA-LSLSVEPVHTTPTYMNPFHVSLSPP-SPPSTFEPPLAS 86
L + ++ +V+N+ P+ LSLS P+H +P + +P H P PP T PPL +
Sbjct: 48 LRHFQQRRRRHVENS---PIQHLSLSSHPIHRSPPF-SPQHPRFQDPLCPPRT--PPLIA 209
Query: 87 TNDS 90
TN +
Sbjct: 210 TNQT 221
>TC213186 similar to UP|Q70G58 (Q70G58) NADPH thioredoxin reductase, partial
(36%)
Length = 745
Score = 31.6 bits (70), Expect = 0.39
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 72 SPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPPFPWAT 117
SPPSPP PP + + SSS+R R S++ PPP P A+
Sbjct: 68 SPPSPP--LPPPYSPRRRTASSSSTRAGR----PSDLAPPPSPSAS 187
>TC219999 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (5%)
Length = 641
Score = 31.2 bits (69), Expect = 0.50
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 53 SVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPP 112
S P ++P+Y P PSPP + PP +T + SS+ KS +PPP
Sbjct: 273 SPSPTTSSPSYPPPPPPPPPHPSPPPSSTPPPTATCPTPSSSA---------KSNPLPPP 121
Query: 113 F 113
F
Sbjct: 120 F 118
>TC216566 similar to UP|Q8S9A1 (Q8S9A1) Glucosyltransferase-8 (Fragment),
partial (32%)
Length = 925
Score = 31.2 bits (69), Expect = 0.50
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +1
Query: 51 SLSVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEK 105
S S PV +PT + P PP P S+ PP+ S S S R RRR +
Sbjct: 322 SPSPSPVPPSPTAV-PLQFRRPPPPPSSSQTPPIRSGGASSQSRRKSRRRRRTTR 483
>TC231014 weakly similar to GB|AAH39061.1|24657680|BC039061 LOC284352 protein
{Homo sapiens;} , partial (12%)
Length = 760
Score = 31.2 bits (69), Expect = 0.50
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -2
Query: 58 HTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPPFPWAT 117
H +PT P SPP+PPS+ PPL S ++ + R + +P P P +T
Sbjct: 408 HLSPTSATP---PASPPTPPSSSPPPLPSARSTLSPA------RTPTQQHAVPDP-PNST 259
Query: 118 DR 119
R
Sbjct: 258 SR 253
>TC223730 similar to UP|Q7SIC9 (Q7SIC9) Transferase, partial (29%)
Length = 865
Score = 31.2 bits (69), Expect = 0.50
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 47 PLALSLSVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLAS 86
PL LSLS +P P ++P PP PP + PPL++
Sbjct: 2 PLPLSLSPKPSSAPPPPLSP------PPPPPPSASPPLSA 103
>TC225869 similar to UP|Q84P56 (Q84P56) TGB12K interacting protein 2, partial
(78%)
Length = 1445
Score = 30.8 bits (68), Expect = 0.66
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 40 VKNNINDPLALSLSVEPVHTTPTYM-NPFHVSLSPPSPPSTFEPP 83
+ N+ DP + S +P H + T H SLSPP S +PP
Sbjct: 742 ISQNLQDPWLVPTSAKPPHHSSTSS*QQDHQSLSPPKYVSEMDPP 608
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.133 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,373,494
Number of Sequences: 63676
Number of extensions: 310394
Number of successful extensions: 3632
Number of sequences better than 10.0: 184
Number of HSP's better than 10.0 without gapping: 3205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3534
length of query: 266
length of database: 12,639,632
effective HSP length: 96
effective length of query: 170
effective length of database: 6,526,736
effective search space: 1109545120
effective search space used: 1109545120
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0150.12