BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0148.17
(215 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226007 similar to UP|Q8LC13 (Q8LC13) Remorin, partial (65%) 277 2e-75
TC226006 similar to UP|REMO_SOLTU (P93788) Remorin (pp34), parti... 275 9e-75
TC226005 similar to UP|REMO_SOLTU (P93788) Remorin (pp34), parti... 244 2e-65
TC215250 similar to UP|REMO_SOLTU (P93788) Remorin (pp34), parti... 199 1e-51
TC215255 similar to UP|Q39087 (Q39087) DNA-binding protein, part... 190 5e-49
AW278763 weakly similar to PIR|T07780|T07 remorin - potato, part... 181 2e-46
TC215253 weakly similar to UP|O80837 (O80837) Remorin, partial (... 177 3e-45
TC215254 similar to UP|O80837 (O80837) Remorin, partial (67%) 174 2e-44
AI522863 162 1e-40
AI988328 weakly similar to GP|601843|gb|AA DNA-binding protein {... 75 5e-24
TC215256 similar to UP|O80837 (O80837) Remorin, partial (36%) 102 2e-22
CD487313 97 7e-21
CD390623 similar to PIR|T07780|T077 remorin - potato, partial (32%) 97 7e-21
AI431098 82 2e-16
TC230887 similar to UP|Q9ZUM1 (Q9ZUM1) Expressed protein (At2g02... 79 2e-15
BQ081087 77 6e-15
TC230967 similar to UP|Q9ZUM1 (Q9ZUM1) Expressed protein (At2g02... 73 9e-14
TC221783 similar to UP|Q8IMK1 (Q8IMK1) CG31035-PA, partial (10%) 70 6e-13
BE475472 62 3e-10
TC207539 similar to UP|Q6Z309 (Q6Z309) Remorin protein-like, par... 60 1e-09
>TC226007 similar to UP|Q8LC13 (Q8LC13) Remorin, partial (65%)
Length = 951
Score = 277 bits (709), Expect = 2e-75
Identities = 157/215 (73%), Positives = 167/215 (77%)
Frame = +1
Query: 1 MTEEQPKKVESESPSNPPPPAPAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPS 60
MTEEQ KKV A TES P+ A PEPVV PKEDVAEEKS+IPQPS
Sbjct: 223 MTEEQSKKV-------------AETESFPSNPA---PEPVV--VPKEDVAEEKSVIPQPS 348
Query: 61 PPESKPVDDSKAIVKVEKTQEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSI 120
P P D+SKA+V VEKT E AEEKP+EGS+NRDAVL RVATEKRLSLIKAWEESEKS
Sbjct: 349 P---SPADESKALVIVEKTSEVAEEKPIEGSVNRDAVLARVATEKRLSLIKAWEESEKSK 519
Query: 121 ADNKAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKR 180
ADNK+HKKLS ISAWENSK AA E ELRKIEE LEKKKA Y EKLKNKIA +HREAEEKR
Sbjct: 520 ADNKSHKKLSAISAWENSKKAAAEAELRKIEEQLEKKKAEYGEKLKNKIATIHREAEEKR 699
Query: 181 AFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF 215
AFIEA+KGE+ LKAEE AAKYRATGTAP K F F
Sbjct: 700 AFIEAQKGEEFLKAEETAAKYRATGTAPTKLFGCF 804
>TC226006 similar to UP|REMO_SOLTU (P93788) Remorin (pp34), partial (64%)
Length = 991
Score = 275 bits (704), Expect = 9e-75
Identities = 156/215 (72%), Positives = 171/215 (78%)
Frame = +2
Query: 1 MTEEQPKKVESESPSNPPPPAPAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPS 60
MTEEQ K VESES + PPP A AP++ PA EAE PE APK DV EEKS+IP PS
Sbjct: 8 MTEEQTKTVESESVT-PPPAAAAPSQVPPAAEAEHVPE-----APK-DVTEEKSVIPVPS 166
Query: 61 PPESKPVDDSKAIVKVEKTQEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSI 120
+ KP D+SKA+V VEKTQE AE KP EGSINRDAVL RVATEKRLSLIKAWEESEKS
Sbjct: 167 S-DDKP-DESKALVLVEKTQEVAEVKPTEGSINRDAVLARVATEKRLSLIKAWEESEKSK 340
Query: 121 ADNKAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKR 180
A+NKAHKKLS +SAWENSK AA E +L+KIEE LEKKKA EK+KNKIA +H+EAEE+R
Sbjct: 341 AENKAHKKLSSVSAWENSKKAAVEADLKKIEEELEKKKAEAAEKIKNKIATIHKEAEERR 520
Query: 181 AFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF 215
A IEAKKGEDLLKAEE AAKYRATGTAPKK F
Sbjct: 521 AIIEAKKGEDLLKAEEQAAKYRATGTAPKKLLGCF 625
>TC226005 similar to UP|REMO_SOLTU (P93788) Remorin (pp34), partial (64%)
Length = 792
Score = 244 bits (624), Expect = 2e-65
Identities = 133/175 (76%), Positives = 147/175 (84%)
Frame = +1
Query: 41 VHDAPKEDVAEEKSIIPQPSPPESKPVDDSKAIVKVEKTQEAAEEKPLEGSINRDAVLTR 100
V +APK DVAEEKS+IP PS + KP D+SKA+V VEKTQE AE KP EGS+NRDAVL R
Sbjct: 4 VPEAPK-DVAEEKSVIPVPSS-DDKP-DESKALVLVEKTQEVAEVKPTEGSVNRDAVLAR 174
Query: 101 VATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAV 160
VATEKRLSLIKAWEESEKS A+NKAHKKLS +SAWENSK AA E +L+KIEE LEKKKA
Sbjct: 175 VATEKRLSLIKAWEESEKSKAENKAHKKLSSVSAWENSKKAAVEADLKKIEEELEKKKAE 354
Query: 161 YVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF 215
EK+KNKIA +H+EAEE+RA IEAKKGEDLLKAEE AAKYRATGTAPKK F
Sbjct: 355 AAEKIKNKIAAIHKEAEERRAIIEAKKGEDLLKAEEQAAKYRATGTAPKKLLGCF 519
>TC215250 similar to UP|REMO_SOLTU (P93788) Remorin (pp34), partial (67%)
Length = 1148
Score = 199 bits (505), Expect = 1e-51
Identities = 115/218 (52%), Positives = 147/218 (66%), Gaps = 12/218 (5%)
Frame = +1
Query: 10 ESESPSNPPPPAPAPTE--------STPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSP 61
+S SPS+ P + A E + PAP A PEP + +AP EK + P P
Sbjct: 94 QSISPSSTEPNSEAMAELQTKVEPVTVPAP-APVDPEPPLAEAPPL----EKKAVAVP-P 255
Query: 62 PESKPVDDSKAIVKVEKTQEAAEEKPLE----GSINRDAVLTRVATEKRLSLIKAWEESE 117
P +++KA+V VEK E E + GS++RD L + EKRLS +KAWEESE
Sbjct: 256 PVPAAAEETKALVVVEKENEKIPEPVKKNASGGSLDRDIALAEIEKEKRLSNVKAWEESE 435
Query: 118 KSIADNKAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAE 177
KS A+NKA K+LS ++AWENSK AA E +LRKIEE LEKKKA Y EK+KNKIA+VH++AE
Sbjct: 436 KSKAENKAQKQLSAVAAWENSKKAALEAQLRKIEEQLEKKKAEYGEKMKNKIALVHKQAE 615
Query: 178 EKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF 215
EKRA +EAK+GE++LKAEE+AAK+RATGT+PKK F F
Sbjct: 616 EKRAMVEAKRGEEILKAEEIAAKHRATGTSPKKAFGCF 729
>TC215255 similar to UP|Q39087 (Q39087) DNA-binding protein, partial (67%)
Length = 732
Score = 190 bits (482), Expect = 5e-49
Identities = 105/196 (53%), Positives = 129/196 (65%), Gaps = 1/196 (0%)
Frame = +2
Query: 21 APAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKPVDDSKAIVKV-EKT 79
A A E E P PVV + P D +K+ +SKAIV V EKT
Sbjct: 41 ATAMAELQSKSETAPAPAPVVAEVPSNDAVAKKA----------SETGESKAIVSVSEKT 190
Query: 80 QEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSK 139
A ++ GSI+RD L V EK+LS +KAWEESEK+ A+N+A K LS I+AWENSK
Sbjct: 191 PVPANKQSSRGSIDRDIALAEVEKEKKLSYVKAWEESEKAKAENRAQKHLSAIAAWENSK 370
Query: 140 IAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAA 199
AA E EL+K+EE LEKKKA Y EK+KNK+A+VH+EAEEKRA IEAK+GE++L+ EE+AA
Sbjct: 371 KAALEAELKKLEEQLEKKKAEYGEKMKNKVALVHKEAEEKRAMIEAKRGEEILQTEEMAA 550
Query: 200 KYRATGTAPKKPFSFF 215
KYRATGT PKK F
Sbjct: 551 KYRATGTTPKKTIGCF 598
>AW278763 weakly similar to PIR|T07780|T07 remorin - potato, partial (52%)
Length = 472
Score = 181 bits (460), Expect = 2e-46
Identities = 104/165 (63%), Positives = 123/165 (74%)
Frame = +2
Query: 29 PAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKPVDDSKAIVKVEKTQEAAEEKPL 88
PA EAE PE APK DV EEKS+IP PS + KP D+SKA+V VEKTQE AE KP
Sbjct: 2 PAAEAEHVPE-----APK-DVTEEKSVIPVPSS-DDKP-DESKALVLVEKTQEVAEVKPT 157
Query: 89 EGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSKIAAKEVELR 148
G INRDA L RVATEKRLSLIKAWEES+KS A+NKAHKKLS +SAWENS+ AA + +L+
Sbjct: 158 *GFINRDAALARVATEKRLSLIKAWEESDKSQAENKAHKKLSSVSAWENSEKAAVDADLK 337
Query: 149 KIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLK 193
KIE+ L A E + N IA++H EAE++RA I+A +GEDLLK
Sbjct: 338 KIED*L*NNNAEAAENITNNIAIIHIEAEDRRAIIDAXRGEDLLK 472
>TC215253 weakly similar to UP|O80837 (O80837) Remorin, partial (67%)
Length = 820
Score = 177 bits (449), Expect = 3e-45
Identities = 98/201 (48%), Positives = 125/201 (61%)
Frame = +2
Query: 15 SNPPPPAPAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKPVDDSKAIV 74
SN P P E PE P PV + P D +K+ S+ + +V
Sbjct: 38 SNKPTAMP---ELQSKPETALAPAPVAAEVPSNDAVAKKA---------SETGESKATVV 181
Query: 75 KVEKTQEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISA 134
EKT ++ GSI+RD L V EK+LS +KAWEESEK+ A+N+A K+LS I+A
Sbjct: 182 ASEKTPVPENKQSSRGSIDRDIALAEVEKEKKLSYVKAWEESEKAKAENRAQKQLSAIAA 361
Query: 135 WENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKA 194
WENSK A E EL+KIEE LEKKKA + E++KNK+A+VH+EA EKRA IEA + E++LK
Sbjct: 362 WENSKKATLEAELKKIEEQLEKKKAEHGERMKNKVALVHKEAGEKRAMIEANRCEEVLKT 541
Query: 195 EELAAKYRATGTAPKKPFSFF 215
EE+AAKYRATGT PKK F
Sbjct: 542 EEMAAKYRATGTTPKKTIRCF 604
>TC215254 similar to UP|O80837 (O80837) Remorin, partial (67%)
Length = 684
Score = 174 bits (442), Expect = 2e-44
Identities = 85/126 (67%), Positives = 104/126 (82%)
Frame = +2
Query: 90 GSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSKIAAKEVELRK 149
GS++RD L + EKRLS +KAWEESEKS A+NKA K LS ++AWENSKIAA E +LRK
Sbjct: 107 GSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAEKHLSAVAAWENSKIAALEAQLRK 286
Query: 150 IEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPK 209
IEE +EKKKA Y EK+KNKI +VH++AEEKRA +EAK+GE++LKAEE+AAK+RATGT PK
Sbjct: 287 IEEQMEKKKAEYGEKMKNKIVLVHKQAEEKRAMVEAKRGEEILKAEEIAAKHRATGTTPK 466
Query: 210 KPFSFF 215
K F F
Sbjct: 467 KAFGCF 484
>AI522863
Length = 484
Score = 162 bits (410), Expect = 1e-40
Identities = 96/169 (56%), Positives = 118/169 (69%)
Frame = +2
Query: 24 PTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKPVDDSKAIVKVEKTQEAA 83
P+++ A EAE PE APK DV EEKS+IP PS + KP D+ KA+V EKTQEAA
Sbjct: 2 PSQAPTAAEAEHDPE-----APK-DVTEEKSVIPVPSS-DDKP-DECKALVLFEKTQEAA 157
Query: 84 EEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSKIAAK 143
+KP EGS+NR AVL R A EKR SLIKAW+ESE S ADNKAHKKLS + AWENS AA
Sbjct: 158 *KKPTEGSVNRHAVLARAAAEKRSSLIKAWDESEISKADNKAHKKLSFVPAWENSTKAAV 337
Query: 144 EVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLL 192
E +L++IEE L K A K+++ IA +H AE++RA I+A KG+ L
Sbjct: 338 EADLKEIEEELYMKYADAAGKIRSIIAAIHNVAEDRRAIIDAHKGKIFL 484
>AI988328 weakly similar to GP|601843|gb|AA DNA-binding protein {Arabidopsis
thaliana}, partial (51%)
Length = 430
Score = 75.1 bits (183), Expect(2) = 5e-24
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = +2
Query: 144 EVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRA 203
E L++IEE L++ KA VEK++NK+A +HR AEEKRA IEA KGE+ L+ EE AAK+R
Sbjct: 245 EAHLKRIEEKLDRNKAKCVEKMQNKVAEIHRTAEEKRAMIEAYKGEEFLEIEEKAAKFRT 424
Query: 204 TG 205
G
Sbjct: 425 RG 430
Score = 52.8 bits (125), Expect(2) = 5e-24
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = +1
Query: 100 RVATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSK 139
R +EKRL+LI+AWEESEK+ A+N+A+K+ + + WENSK
Sbjct: 115 RFESEKRLALIRAWEESEKTKAENRAYKRHNAVVLWENSK 234
>TC215256 similar to UP|O80837 (O80837) Remorin, partial (36%)
Length = 525
Score = 102 bits (253), Expect = 2e-22
Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Frame = +1
Query: 4 EQPKKVESESPSNPPPPAPAPTESTPAPE-AEAKPEPVVHDAPKEDVAEEKSIIPQPSPP 62
+ P +E S E P P A +PEP + + E+K+++ P P
Sbjct: 67 QSPSLSSTEPNSEAMAELQTKVEPVPVPALAPVEPEPPLX*GVRP--LEQKAVVVPPPVP 240
Query: 63 ESKPVDDSKAIVKVEKTQE------AAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEES 116
+ +++KA+V VEK +E ++ GS++RD L + EKRLS +KAWEES
Sbjct: 241 AA--AEETKALVVVEKEKENEKIPEPVKKNATGGSLDRDIALAEIEKEKRLSNVKAWEES 414
Query: 117 EKSIADNKAHKKLSDISAWENSKIAAKEVELRKIEE 152
EKS A+NKA K LS ++AWENSKIAA E +LRKIEE
Sbjct: 415 EKSKAENKAEKHLSAVAAWENSKIAALEAQLRKIEE 522
>CD487313
Length = 607
Score = 96.7 bits (239), Expect = 7e-21
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = +2
Query: 152 ENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKP 211
E LEKKKA EK+KNKIA +H+EAEE+RA IEAKKGEDLLKAEE AAKYRATGTAPKK
Sbjct: 272 EELEKKKAEAAEKIKNKIATIHKEAEERRAIIEAKKGEDLLKAEEQAAKYRATGTAPKKL 451
Query: 212 FSFF 215
F
Sbjct: 452 LGCF 463
>CD390623 similar to PIR|T07780|T077 remorin - potato, partial (32%)
Length = 591
Score = 96.7 bits (239), Expect = 7e-21
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = -3
Query: 152 ENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKP 211
E LEKKKA EK+KNKIA +H+EAEE+RA IEAKKGEDLLKAEE AAKYRATGTAPKK
Sbjct: 397 EELEKKKAEAAEKIKNKIATIHKEAEERRAIIEAKKGEDLLKAEEQAAKYRATGTAPKKL 218
Query: 212 FSFF 215
F
Sbjct: 217 LGCF 206
>AI431098
Length = 232
Score = 82.0 bits (201), Expect = 2e-16
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = -1
Query: 138 SKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEEL 197
+K A E +L KI + LEKKKA EK+K+KIA + +E EE+RA I AKKGED KAE
Sbjct: 232 AKKALFEADLNKI*KELEKKKAEAAEKIKSKIAAIPKEVEERRAII*AKKGEDFFKAEGQ 53
Query: 198 AAKYRATGTAPKK 210
AAKY+ATG APKK
Sbjct: 52 AAKYKATGPAPKK 14
>TC230887 similar to UP|Q9ZUM1 (Q9ZUM1) Expressed protein (At2g02170/F5O4.6),
partial (29%)
Length = 1085
Score = 78.6 bits (192), Expect = 2e-15
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Frame = +1
Query: 11 SESPSNPPPPAPAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKPVDDS 70
S PS P APAPT + +++ PV + K +++EE+ I + V
Sbjct: 181 SSMPSTPRRGAPAPTPLDNTTDEDSQ-FPVENG--KRNLSEEEMKIKTRREIAALGVQLG 351
Query: 71 KAIVKV---EKTQEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHK 127
K + + QE + P E ++N R+ EKR +L WEE+EKS + +
Sbjct: 352 KMNIAAWASKDEQEKNKSSPQEANVNEQE---RIEFEKRAAL---WEEAEKSKHTARFKR 513
Query: 128 KLSDISAWENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKK 187
+ I AWE+ + A E E+R+IE +E+ +A K+ KIAM + +EEKRA EA+K
Sbjct: 514 EEIKIQAWESQQKAKLEAEMRRIEAKVEQMRAQTHAKMVKKIAMARQRSEEKRAAAEARK 693
Query: 188 GEDLLKAEELAAKYRATGTAPKKPF 212
+ + R TG P +
Sbjct: 694 NREAERTAAQTEYIRQTGRLPSSNY 768
>BQ081087
Length = 427
Score = 77.0 bits (188), Expect = 6e-15
Identities = 55/145 (37%), Positives = 80/145 (54%), Gaps = 21/145 (14%)
Frame = +3
Query: 10 ESESPSNPPPPAPAPTE--------STPAPEAEAKPEPVVHDAPKEDVAEEKSI-IPQPS 60
+S SPS+ P + A E + PAP A PEP + +AP E+K++ +P P
Sbjct: 3 QSISPSSTEPNSEAMAELQTKVEPVTVPAP-APVDPEPPLAEAPP---LEKKAVAVPPPV 170
Query: 61 PPESKPV--------DDSKAIVKVEKTQEAAEEKPLE----GSINRDAVLTRVATEKRLS 108
P ++ +++KA+V VEK E E + GS++RD L + EKRLS
Sbjct: 171 PAAAEETKALVPAAAEETKALVVVEKENEKIPEPVKKNASGGSLDRDIALAEIEKEKRLS 350
Query: 109 LIKAWEESEKSIADNKAHKKLSDIS 133
+KAWEESEKS A+NKA K+LS ++
Sbjct: 351 NVKAWEESEKSKAENKAQKQLSAVA 425
>TC230967 similar to UP|Q9ZUM1 (Q9ZUM1) Expressed protein (At2g02170/F5O4.6),
partial (32%)
Length = 790
Score = 73.2 bits (178), Expect = 9e-14
Identities = 46/140 (32%), Positives = 70/140 (49%)
Frame = +1
Query: 75 KVEKTQEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISA 134
K E+ ++A+ + + V+ R A AWEE+EK+ + ++ I A
Sbjct: 241 KEEEDKDASTSLKTKTEPPKSVVVARAA---------AWEEAEKAKYMARFRREEMKIQA 393
Query: 135 WENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKA 194
WEN + A E +++KIE +E+ + +KL NK+A +AEEKRA EA + KA
Sbjct: 394 WENHQKAKTEAKMKKIEVEVERIRGKAHDKLMNKLAAARHKAEEKRAAAEANRNHQAAKA 573
Query: 195 EELAAKYRATGTAPKKPFSF 214
EE A R +G P SF
Sbjct: 574 EEQAEYIRRSGHVPSSYLSF 633
>TC221783 similar to UP|Q8IMK1 (Q8IMK1) CG31035-PA, partial (10%)
Length = 659
Score = 70.5 bits (171), Expect = 6e-13
Identities = 59/211 (27%), Positives = 90/211 (41%), Gaps = 3/211 (1%)
Frame = +3
Query: 7 KKVESESPSNPPPPAPAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKP 66
+ + S+ PS P A T +T +P P+ + VAE ++
Sbjct: 6 RPITSQEPSRTGTPIRATTPATRSPIHSGTSTPMRGQNGLQQVAEG-------GHGTTRK 164
Query: 67 VDDSKAIVKVEKTQE---AAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADN 123
D + +KT E A + PLE S AW+E+E++
Sbjct: 165 CGDQGSTSPCKKTHEDHQARKLSPLE------------------SRAMAWDEAERAKFMA 290
Query: 124 KAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFI 183
+ ++ I AWEN +I E+E++K+E E+ KA+ E+ NK+A R AEEKRA
Sbjct: 291 RFKREEVKIQAWENHQIRKAEMEMKKMEVKAERMKALAQERFANKLASTKRIAEEKRANA 470
Query: 184 EAKKGEDLLKAEELAAKYRATGTAPKKPFSF 214
+ K + L+ E R TG P FSF
Sbjct: 471 QVKLNDKALRTTERVEYIRRTGHVPSS-FSF 560
>BE475472
Length = 208
Score = 61.6 bits (148), Expect = 3e-10
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = -1
Query: 138 SKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEEL 197
+K A + +L++I E L++KK V+K+ IA +++E E I+ KKGEDL K EE
Sbjct: 205 AKPADVQADLQQIAEALQQKKVHVVDKITTTIAAIYKEXAETTVIIQVKKGEDLFKVEE* 26
Query: 198 AAKYRATG 205
A KYRATG
Sbjct: 25 AVKYRATG 2
>TC207539 similar to UP|Q6Z309 (Q6Z309) Remorin protein-like, partial (14%)
Length = 760
Score = 59.7 bits (143), Expect = 1e-09
Identities = 28/92 (30%), Positives = 54/92 (58%)
Frame = +1
Query: 113 WEESEKSIADNKAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMV 172
W+ SE S +K + + ISAWEN + A E +RK+E LEK++A ++K+ NK+ +
Sbjct: 97 WDVSETSKPASKTRSEEAKISAWENLQKAKAEAAIRKLEMKLEKRRASSMDKIMNKLRLA 276
Query: 173 HREAEEKRAFIEAKKGEDLLKAEELAAKYRAT 204
++A+E R+ + + + +++ A+ + T
Sbjct: 277 QKKAQEMRSSVPHNQTDRVVRTSHKASSFLRT 372
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.302 0.122 0.325
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,406,059
Number of Sequences: 63676
Number of extensions: 172224
Number of successful extensions: 9357
Number of sequences better than 10.0: 1016
Number of HSP's better than 10.0 without gapping: 3624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6436
length of query: 215
length of database: 12,639,632
effective HSP length: 93
effective length of query: 122
effective length of database: 6,717,764
effective search space: 819567208
effective search space used: 819567208
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0148.17