TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0146.2
         (687 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG789506                                                              108  6e-24
TC217419 weakly similar to UP|YG49_SCHPO (O60184) Protein C23E6....    30  3.6
TC206047                                                               30  3.6
TC206845 similar to UP|Q84WK4 (Q84WK4) At4g22300, partial (93%)        30  4.6
TC226049 similar to UP|O24078 (O24078) Protein phosphatase 2C, p...    29  6.1
TC227783                                                               29  6.1
TC222096                                                               29  7.9

>BG789506 
          Length = 387

 Score =  108 bits (271), Expect = 6e-24
 Identities = 56/113 (49%), Positives = 76/113 (66%), Gaps = 3/113 (2%)
 Frame = +1

Query: 217 SFSRFIKDHY--VESGEVSDAEHVAFLLYWLSAYVFCTKSLRIPAKLLPLANLLHEGRQL 274
           +FS++I +H   VE  EVSD EHVAFL  WLS YVFCTKSL++  + +P+A  +HEG+  
Sbjct: 10  TFSKYIAEHKGSVEE-EVSDEEHVAFLTLWLSHYVFCTKSLQVAKRFIPMALQIHEGQNF 186

Query: 275 AMARLVLGNLYQMLNEAVEDIRNTKT-VSLNAAGPLWLFQLWLNAVFESLLPV 326
              RL+L  LY+ L EA +D++ +K   S   +GP+WL QLWLNA FE  + V
Sbjct: 187 GFGRLLLAVLYESLGEACDDLKKSKDGSSFLVSGPMWLLQLWLNATFEQEMGV 345


>TC217419 weakly similar to UP|YG49_SCHPO (O60184) Protein C23E6.09 in
           chromosome II, partial (3%)
          Length = 692

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
 Frame = -2

Query: 486 PFTYAPSYYATNAFKAWW--SEYWAQISKPLVDCLQCMTDAFLLQKQDPKKTKGMHLAEI 543
           PFTYAP  Y        W  S YW+  S P   C Q  ++  +    + K    +HL E 
Sbjct: 535 PFTYAPQPYQVPLTLTSWMTSHYWS--SLPFHPCFQKRSNLQITCTTEQKAFVQLHLQEF 362

Query: 544 RSF 546
             +
Sbjct: 361 HQY 353


>TC206047 
          Length = 1052

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 28/89 (31%), Positives = 37/89 (41%)
 Frame = -2

Query: 567 AAQVLRQKWELKAKKSKLVVPPGEEGLSFVIRKTGFRFPSLPTSKFALAFPPVLPKWVDH 626
           AAQVL  K  LK K  +      EEGL F+ ++  F   SLP                  
Sbjct: 520 AAQVLLNK-SLKTKDQE------EEGLIFLFKQVAFYNTSLP-----------------K 413

Query: 627 ININVLANQALPPRKRVTWTKYHLWNFPY 655
           I++ V A   LP  K + +    LW FP+
Sbjct: 412 IHLRVSAGLILPLSKLIIYRL*FLW*FPF 326


>TC206845 similar to UP|Q84WK4 (Q84WK4) At4g22300, partial (93%)
          Length = 947

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/37 (35%), Positives = 20/37 (53%)
 Frame = +2

Query: 598 RKTGFRFPSLPTSKFALAFPPVLPKWVDHININVLAN 634
           R T + FPS P++     +  V+P W D + I V A+
Sbjct: 242 RDTKWSFPSAPSAPVTCNYGSVMPSWFDILEIPVAAD 352


>TC226049 similar to UP|O24078 (O24078) Protein phosphatase 2C, partial (34%)
          Length = 604

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 20/69 (28%), Positives = 31/69 (43%), Gaps = 14/69 (20%)
 Frame = +3

Query: 593 LSFVIRKTGFRFPSLP--------------TSKFALAFPPVLPKWVDHININVLANQALP 638
           L  ++ + GF FPSLP              T+ F     P+   W     ++ L  +  P
Sbjct: 303 LLLLLLRFGFAFPSLPPCSLLLLLLRLPLRTAPF*RGSDPL--GWTYPFPLSPLRFRPRP 476

Query: 639 PRKRVTWTK 647
           PR+RVTW++
Sbjct: 477 PRRRVTWSR 503


>TC227783 
          Length = 1056

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 15/43 (34%), Positives = 24/43 (54%)
 Frame = +3

Query: 142 DLIQLSRSPISYNPAMLLSALYFWERSTNCLHVPFGMITPTLL 184
           D ++L R P+ Y   ++LSAL FW  S      P G+I+  ++
Sbjct: 468 DPLELLRGPLYYVLILILSALVFWRES------PIGVISLAMM 578


>TC222096 
          Length = 728

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
 Frame = +3

Query: 378 PYSKAIRGPFWLRNSYPNASDSALPKE-------HHIT 408
           PY      PF  + SYP++S SA+ +E       HHIT
Sbjct: 48  PYESPASQPFLSKPSYPSSSSSAVEEESESNQQFHHIT 161


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.321    0.136    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,608,056
Number of Sequences: 63676
Number of extensions: 554014
Number of successful extensions: 2918
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2916
length of query: 687
length of database: 12,639,632
effective HSP length: 104
effective length of query: 583
effective length of database: 6,017,328
effective search space: 3508102224
effective search space used: 3508102224
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)