BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0143b.3
(369 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BU083469 265 2e-71
BU927001 similar to GP|8778534|gb| F21D18.5 {Arabidopsis thalian... 210 7e-55
TC234215 similar to UP|Q75I88 (Q75I88) Expressed protein (With a... 197 8e-51
TC232127 similar to UP|Q94EI9 (Q94EI9) AT3g14410/MLN21_19, parti... 174 7e-44
TC205226 similar to GB|AAO11561.1|27363284|BT002645 At2g25520/F1... 164 8e-41
CF922686 161 5e-40
BQ080717 152 2e-37
TC221157 similar to UP|Q94EI9 (Q94EI9) AT3g14410/MLN21_19, parti... 150 9e-37
TC219661 similar to UP|Q9LNH5 (Q9LNH5) F21D18.5, partial (26%) 135 3e-32
TC203997 similar to UP|Q9FFJ6 (Q9FFJ6) Phosphate/phosphoenolpyru... 132 2e-31
TC226846 similar to UP|Q9SFE9 (Q9SFE9) T26F17.9 (GONST5 Golgi Nu... 127 6e-30
BU548974 94 7e-20
TC234442 similar to GB|AAO11561.1|27363284|BT002645 At2g25520/F1... 91 6e-19
TC206471 similar to GB|AAR24728.1|38603966|BT010950 At4g09810 {A... 89 4e-18
TC206970 similar to UP|Q6K225 (Q6K225) Phosphate translocator-li... 80 2e-15
BI471718 similar to GP|5733885|gb|A ESTs gb|T22141 and gb|H37217... 56 2e-14
TC206335 similar to GB|AAP42755.1|30984584|BT008742 At2g30460 {A... 76 2e-14
TC225305 similar to UP|CPTR_PEA (P21727) Triose phosphate/phosph... 70 1e-12
TC228463 similar to GB|AAR24728.1|38603966|BT010950 At4g09810 {A... 46 1e-08
TC203981 similar to UP|Q9FFJ6 (Q9FFJ6) Phosphate/phosphoenolpyru... 55 4e-08
>BU083469
Length = 448
Score = 265 bits (677), Expect = 2e-71
Identities = 130/149 (87%), Positives = 138/149 (92%)
Frame = +1
Query: 152 ISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLF 211
ISSYGEIHFN++GTVYQVTGI AEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLF
Sbjct: 1 ISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLF 180
Query: 212 IPWYILEKPEMEDPHMQFNFWIFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKDWLL 271
+PWY+LEKP ME +QFNFWIFFSNA+CALALN S FLVIGRTGAVTIRVAGVLKDW+L
Sbjct: 181 VPWYLLEKPVMEVSQIQFNFWIFFSNAICALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 360
Query: 272 ITLSTVLFPESKITGLNITGYAIALSGVV 300
I LSTV+FPES ITGLNI GYAIAL GVV
Sbjct: 361 IALSTVIFPESTITGLNIVGYAIALCGVV 447
>BU927001 similar to GP|8778534|gb| F21D18.5 {Arabidopsis thaliana}, partial
(34%)
Length = 446
Score = 210 bits (535), Expect = 7e-55
Identities = 104/132 (78%), Positives = 115/132 (86%)
Frame = +2
Query: 1 MALGAIIMSKQHLLTYMYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGA 60
++LGA +M+K LLTY YL +YI LSSGVILYNKWVLS YFNFP PI+LTMIHM FSGA
Sbjct: 50 LSLGATMMNKTLLLTYFYLFIYILLSSGVILYNKWVLSPKYFNFPLPISLTMIHMGFSGA 229
Query: 61 VAFVLIRVLKVVSPIKMTLHIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMP 120
VAF L+RV KVV+P+KMT IYATCV+PISAFFA+SLWFGNTAYL ISVAFIQMLKALMP
Sbjct: 230 VAFFLVRVFKVVTPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMP 409
Query: 121 VATFLVAVTLGT 132
VATFLVAV GT
Sbjct: 410 VATFLVAVMCGT 445
>TC234215 similar to UP|Q75I88 (Q75I88) Expressed protein (With alternative
splicing), partial (50%)
Length = 406
Score = 197 bits (500), Expect = 8e-51
Identities = 98/102 (96%), Positives = 101/102 (98%)
Frame = +3
Query: 82 YATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTLGTEKLRCDVFW 141
YATCVVPISAFFAASLWFGNTAYL+ISVAFIQMLKALMPVATFLVAVT GTEKLRCDVFW
Sbjct: 99 YATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLVAVTCGTEKLRCDVFW 278
Query: 142 NMVLVSVGVVISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQ 183
NMVLVSVGVVISSYGEIHFNV+GTVYQVTGI+AEALRLVLTQ
Sbjct: 279 NMVLVSVGVVISSYGEIHFNVLGTVYQVTGIVAEALRLVLTQ 404
>TC232127 similar to UP|Q94EI9 (Q94EI9) AT3g14410/MLN21_19, partial (46%)
Length = 820
Score = 174 bits (440), Expect = 7e-44
Identities = 87/177 (49%), Positives = 124/177 (69%), Gaps = 4/177 (2%)
Frame = +1
Query: 156 GEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWY 215
GEI+ N IG VYQ+ G++ EALRL+ ++ +++KGL LNPI+ +YY++PCS + LF+PW
Sbjct: 10 GEINLNWIGVVYQMGGVVGEALRLIFMEIFVKRKGLKLNPISVMYYVSPCSAICLFLPWI 189
Query: 216 ILEKPEMEDPHMQFNF--WIFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKDWLLIT 273
LEKP+M D H +NF + N LC ALNLS FLVI T A+TIRVAGV+KDW+++
Sbjct: 190 FLEKPKM-DEHGPWNFPPVLLILNCLCTFALNLSVFLVITHTSALTIRVAGVVKDWVVVL 366
Query: 274 LSTVLFPESKITGLNITGYAIALSGVVLYNYLKVK--DARTSQLQSTQDESTKMEKK 328
LS VLF ++K+T +N+ GYAIA++GV YN K+K +R + S + S + E +
Sbjct: 367 LSAVLFADTKLTLINLFGYAIAIAGVAAYNNCKLKKETSRDTSDDSNPESSQRQESQ 537
>TC205226 similar to GB|AAO11561.1|27363284|BT002645 At2g25520/F13B15.18
{Arabidopsis thaliana;} , partial (52%)
Length = 970
Score = 164 bits (414), Expect = 8e-41
Identities = 83/185 (44%), Positives = 120/185 (64%), Gaps = 6/185 (3%)
Frame = +2
Query: 150 VVISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVF 209
V +++YGE F+ G Q+ + EA RLVL Q+LL KG++LNPITSLYYIAPC VF
Sbjct: 2 VAVAAYGEAKFDAWGVTXQLMAVAFEATRLVLIQILLNSKGISLNPITSLYYIAPCCLVF 181
Query: 210 LFIPWYILEKPEMED-PHMQFNFWIFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKD 268
L +PW I+E P + D +F IF +N+ CA ALNL+ FL++G+T A+T+ VAGV+KD
Sbjct: 182 LSVPWIIMEYPSLRDNSSFHLDFAIFGTNSACAFALNLAVFLLVGKTSALTMNVAGVVKD 361
Query: 269 WLLITLSTVLFPESKITGLNITGYAIALSGVVLYNY-----LKVKDARTSQLQSTQDEST 323
WLLI S + ++ +T +N+ GY +A GV YN+ LK +A+ LQ+ ++
Sbjct: 362 WLLIAFSWSVIKDT-VTPINLIGYGLAFLGVAYYNHCKLQALKASEAQKKALQADEEAGR 538
Query: 324 KMEKK 328
+E+K
Sbjct: 539 LLEQK 553
>CF922686
Length = 294
Score = 161 bits (407), Expect = 5e-40
Identities = 77/95 (81%), Positives = 87/95 (91%)
Frame = +1
Query: 70 KVVSPIKMTLHIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVT 129
K+V+P+KMT IYATCVVPISAFFA+SLWFGNTAYL ISVAFIQMLKALMPVATF++AV
Sbjct: 10 KIVTPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFIMAVL 189
Query: 130 LGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVIG 164
G +K RCDVF NM+LVSVGVVISSYGEIHFN++G
Sbjct: 190 CGIDKARCDVFLNMLLVSVGVVISSYGEIHFNIVG 294
>BQ080717
Length = 426
Score = 152 bits (384), Expect = 2e-37
Identities = 68/140 (48%), Positives = 104/140 (73%)
Frame = +1
Query: 14 LTYMYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKVVS 73
L+Y Y+ ++I LS VI+YNK++L +N+PFPI+LTMIHM+F +A +L+RVL++V
Sbjct: 7 LSYSYVAIWIFLSFSVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAILLVRVLRIVE 186
Query: 74 PIKMTLHIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTLGTE 133
P+ M+ H+Y + VVPI A ++ SLW N+AY+++SV+FIQMLKALMPVA + + V L E
Sbjct: 187 PVSMSRHVYLSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLRKE 366
Query: 134 KLRCDVFWNMVLVSVGVVIS 153
+ D +NM+ +S+GV ++
Sbjct: 367 SYKNDTMFNMLSISLGVGVA 426
>TC221157 similar to UP|Q94EI9 (Q94EI9) AT3g14410/MLN21_19, partial (60%)
Length = 661
Score = 150 bits (379), Expect = 9e-37
Identities = 76/138 (55%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
Frame = +3
Query: 12 HLLTYMYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKV 71
+ LTY Y+L+YI+LSSG I +NKWVLS+ NFP+P+ LT++HM FS + FVL ++LKV
Sbjct: 45 NFLTYAYILLYIALSSGQIFFNKWVLSSKEINFPYPLGLTLLHMVFSSVLCFVLTKILKV 224
Query: 72 VSPIK-MTLHIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTL 130
+ + MT IYAT VVPI A FA +LW GNTAYL+ISVAF QMLKA+MPVA F++ V
Sbjct: 225 MKVEEGMTPEIYATSVVPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFVLGVAA 404
Query: 131 GTEKLRCDVFWNMVLVSV 148
G E + W ++LV +
Sbjct: 405 GLEFTK----WEVLLVKL 446
Score = 87.8 bits (216), Expect = 7e-18
Identities = 41/84 (48%), Positives = 60/84 (70%), Gaps = 2/84 (2%)
Frame = +2
Query: 166 VYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDP 225
VYQ+ G++ EALRL+ ++ +++KGL LNP++ +YY++PCS + LF+PW LEKP+M D
Sbjct: 413 VYQMGGVVGEALRLIFMEIFVKRKGLKLNPLSVMYYVSPCSAICLFLPWIFLEKPKM-DE 589
Query: 226 HMQFNF--WIFFSNALCALALNLS 247
H +NF + N LC ALNLS
Sbjct: 590 HGPWNFPAVMLILN*LCTCALNLS 661
>TC219661 similar to UP|Q9LNH5 (Q9LNH5) F21D18.5, partial (26%)
Length = 720
Score = 135 bits (340), Expect = 3e-32
Identities = 81/132 (61%), Positives = 92/132 (69%), Gaps = 12/132 (9%)
Frame = +1
Query: 247 STFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLYNYLK 306
S VIGRTGAVTIRVAGVLKDW+LI TV+FPES ITGLNI GYAIAL GVV+YNY+K
Sbjct: 1 SIXXVIGRTGAVTIRVAGVLKDWILIAXXTVIFPESTITGLNIIGYAIALCGVVMYNYIK 180
Query: 307 VKDARTSQL--QSTQDEST---KMEKKAED----DVISNEE--TLQNDLVSDTHFDEEAP 355
VKD R SQL +S D T K EKK+ D D I ++E + N SD DEE P
Sbjct: 181 VKDVRASQLPVESIPDRITKDWKFEKKSSDIYVPDTIGDDEGSSGANGTASDMKIDEETP 360
Query: 356 LI-SSRISHLGR 366
LI SSR+SH+GR
Sbjct: 361 LISSSRLSHIGR 396
>TC203997 similar to UP|Q9FFJ6 (Q9FFJ6) Phosphate/phosphoenolpyruvate
translocator protein-like, partial (97%)
Length = 1271
Score = 132 bits (332), Expect = 2e-31
Identities = 92/304 (30%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Frame = +1
Query: 9 SKQHLLTYMYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRV 68
S + LL + + S + GV+L NK++LS + F +PI LTM HM ++V I
Sbjct: 82 SSRRLLRIGLVSAWYSSNIGVLLLNKYLLSN--YGFKYPIFLTMCHMTACSLFSYVAIAW 255
Query: 69 LKVVSPIKMTLHIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAV 128
LK+V + + + +S F S+ FGN + ++ V+F Q + A P T + A
Sbjct: 256 LKMVPMQTIRSRLQFLKIAALSLIFCFSVVFGNVSLRYLPVSFNQAVGATTPFFTAVFAY 435
Query: 129 TLGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQK 188
+ ++ + +V V GVVI+S GE F++ G + + A AL+ VL +LL
Sbjct: 436 VMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFIVCIAATAARALKSVLQGILLSS 615
Query: 189 KGLTLNPITSLYYIAPCSFVFLFIPWYILEKP------EMEDPHMQFNFWIFFSNALCAL 242
+G LN + L Y+AP + VFL I+E+ + ++ +++ F++AL A
Sbjct: 616 EGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSAL-AY 792
Query: 243 ALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLY 302
+NL+ FLV T A+T++V G K + + +S ++F + ++ + GY++ + GVVLY
Sbjct: 793 FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIF-RNPVSVTGMMGYSLTVLGVVLY 969
Query: 303 NYLK 306
+ K
Sbjct: 970 SQAK 981
>TC226846 similar to UP|Q9SFE9 (Q9SFE9) T26F17.9 (GONST5 Golgi Nucleotide
sugar transporter), partial (97%)
Length = 1334
Score = 127 bits (320), Expect = 6e-30
Identities = 85/305 (27%), Positives = 160/305 (51%), Gaps = 5/305 (1%)
Frame = +2
Query: 19 LLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKVVSPIKMT 78
+L + + + VI+ NKW+ L +F FP++++ +H S A+V+I++LK+ I +
Sbjct: 197 ILQWWAFNVTVIIVNKWIFQKL--DFKFPLSVSCVHFICSSIGAYVVIKLLKLKPLITVD 370
Query: 79 LHIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTLGTEKLRCD 138
+ P+S F ++ GN + +I V+F+Q +K+ P T ++ + +
Sbjct: 371 PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWR 550
Query: 139 VFWNMVLVSVGVVISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITS 198
++ ++V + G++++S E+ FN+ G + G +A + + +L + LL G + I +
Sbjct: 551 IWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH--GYKFDSINT 724
Query: 199 LYYIAPCSFVFLFIPWYILEKPEMED-----PHMQFNFWIFFSNALCALALNLSTFLVIG 253
+YY+AP + + L +P +LE + + P+ I FS+ + A LN S F VI
Sbjct: 725 VYYMAPFATMILALPAMLLEGNGILEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIH 904
Query: 254 RTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLYNYLKVKDARTS 313
T AVT VAG LK + + +S ++F + I+ LN G + L G Y Y++ K ++
Sbjct: 905 STTAVTFNVAGNLKVAVAVLVSWLIF-RNPISYLNSVGCTVTLVGCTFYGYVRHKLSQQP 1081
Query: 314 QLQST 318
Q+ T
Sbjct: 1082QVPGT 1096
>BU548974
Length = 602
Score = 94.4 bits (233), Expect = 7e-20
Identities = 52/76 (68%), Positives = 58/76 (75%), Gaps = 5/76 (6%)
Frame = -2
Query: 299 VVLYNYLKVKDARTSQLQSTQDESTK---MEKKAEDDVISNEETLQNDLVSDTHFDEEAP 355
VV YNYLKV+D RTSQLQS QDES K EKKA+D + + +E ND VSDTH DEEAP
Sbjct: 601 VVFYNYLKVRDVRTSQLQSIQDESAKELQTEKKADDAMDNKDEASWNDSVSDTHLDEEAP 422
Query: 356 LISSRISH--LGRKPA 369
LISSRISH +GRKPA
Sbjct: 421 LISSRISHFGVGRKPA 374
>TC234442 similar to GB|AAO11561.1|27363284|BT002645 At2g25520/F13B15.18
{Arabidopsis thaliana;} , partial (27%)
Length = 432
Score = 91.3 bits (225), Expect = 6e-19
Identities = 40/85 (47%), Positives = 64/85 (75%)
Frame = +2
Query: 10 KQHLLTYMYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVL 69
K+ +L+Y Y+ ++I LS VI+YNK++L +N+P+PI+LTMIHMAF ++A++L+RVL
Sbjct: 173 KKIVLSYTYVAIWIFLSFTVIVYNKYILDRKMYNWPYPISLTMIHMAFCSSLAYILVRVL 352
Query: 70 KVVSPIKMTLHIYATCVVPISAFFA 94
K+V P+ M+ +Y VVPI A ++
Sbjct: 353 KLVEPVSMSRDLYLKSVVPIGALYS 427
>TC206471 similar to GB|AAR24728.1|38603966|BT010950 At4g09810 {Arabidopsis
thaliana;} , partial (94%)
Length = 1533
Score = 88.6 bits (218), Expect = 4e-18
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 11/315 (3%)
Frame = +1
Query: 20 LVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKVVSPIKMTL 79
L + S G+IL NK +++T + F F TLT +H A +L +LK + I+ T
Sbjct: 289 LFNVVTSVGIILVNKALMAT--YGFSFATTLTGLHFA----TTTLLTLILKSLGYIQ-TS 447
Query: 80 HIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLK-ALMPVATFLVAVTLGTEKLRCD 138
H+ + ++ F S+ N + ++ SV F Q+ K +++PV+ FL V L + D
Sbjct: 448 HLPVSDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFL-EVVLDNVRYSRD 624
Query: 139 VFWNMVLVSVGVVISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITS 198
++VLV +GV + + ++ N G + V + + AL+ L +K ++
Sbjct: 625 TKLSIVLVLLGVAVCTVTDVSVNAKGFIAAVIAVWSTALQQYYVHFLQRK--YSIGSFNL 798
Query: 199 LYYIAPCSFVFLFIP------WYILEKPEMEDPHMQFNFWIFFSNALCALALNLSTFLVI 252
L + AP L + W ++ + + +I S + A+ NLS F+ I
Sbjct: 799 LGHTAPAQAASLLLVGPFMDYWLTGKRVDAYGYGLTSTLFIILSCTI-AVGTNLSQFICI 975
Query: 253 GRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLYNYLKV----K 308
GR AVT +V G +K L++ L + F + + + G IA++G+V Y K
Sbjct: 976 GRFTAVTFQVLGHMKTILVLILGFIFFGKEGLNLHVVLGMIIAIAGMVWYGNASSKPGGK 1155
Query: 309 DARTSQLQSTQDEST 323
+ R+ L TQD S+
Sbjct: 1156ERRSFSLPKTQDYSS 1200
>TC206970 similar to UP|Q6K225 (Q6K225) Phosphate translocator-like, partial
(54%)
Length = 911
Score = 79.7 bits (195), Expect = 2e-15
Identities = 55/191 (28%), Positives = 96/191 (49%), Gaps = 5/191 (2%)
Frame = +3
Query: 143 MVLVSVGVVISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYI 202
+ L+ VGV I+S ++ N +GT+ + II + +LT + +K L ++ LY
Sbjct: 39 LFLLLVGVGIASITDLQLNFVGTILSLLAIITTCVGQILTNTIQKK--LNVSSTQLLYQS 212
Query: 203 APCSFVFLFIPWYILEKPEMEDPHMQFNFW-----IFFSNALCALALNLSTFLVIGRTGA 257
AP LF+ ++++ + + + + L A+++N STFLVIG+T
Sbjct: 213 APFQAAILFVSGPVVDQMLTKQNVFAYKYSPVVLAFIILSCLIAVSVNFSTFLVIGKTSP 392
Query: 258 VTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLYNYLKVKDARTSQLQS 317
VT +V G LK L++ L TG NI G IA+ G+ LY+Y ++ + QL S
Sbjct: 393 VTYQVLGHLKTCLVLGFGYTLL-HDPFTGRNILGILIAVFGMGLYSYFCTEENKKKQLAS 569
Query: 318 TQDESTKMEKK 328
+++++ K
Sbjct: 570 DLPLASQVKDK 602
>BI471718 similar to GP|5733885|gb|A ESTs gb|T22141 and gb|H37217 come from
this gene. {Arabidopsis thaliana}, partial (12%)
Length = 421
Score = 55.8 bits (133), Expect(2) = 2e-14
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 119 MPVATFLVAVTLGTEKLRCDVFWNMVLV 146
+PVATF+VAVT GTEKLRCDVFWNMVLV
Sbjct: 337 VPVATFVVAVTCGTEKLRCDVFWNMVLV 420
Score = 40.8 bits (94), Expect(2) = 2e-14
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 99 FGNTAYLFISVAFIQMLKAL 118
FGNTAYL+ISVAFIQMLKAL
Sbjct: 182 FGNTAYLYISVAFIQMLKAL 241
>TC206335 similar to GB|AAP42755.1|30984584|BT008742 At2g30460 {Arabidopsis
thaliana;} , partial (60%)
Length = 1150
Score = 76.3 bits (186), Expect = 2e-14
Identities = 58/239 (24%), Positives = 110/239 (45%), Gaps = 6/239 (2%)
Frame = +1
Query: 106 FISVAFIQMLKALMPVATFLVAVTLGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVIGT 165
F SV F QM K + T L+ + ++ + + + ++ +GV I++ ++ N +G+
Sbjct: 7 FNSVGFYQMTKLAIIPCTVLLEIIFFGKRFSKRIQFALSILLLGVGIATVTDLQLNALGS 186
Query: 166 VYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDP 225
+I + ++T + +K ++ + LY P L I L+K
Sbjct: 187 FLSFLAVITTCVAQIMTNTIQKKYKVSSTQL--LYQSCPYQAATLLISGPYLDKLLTNQN 360
Query: 226 HMQFNFW-----IFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFP 280
FN+ + L ++++N STFLVIG+T VT +V G LK L++ +L
Sbjct: 361 VFGFNYTTQVTVFIILSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILL- 537
Query: 281 ESKITGLNITGYAIALSGVVLYNYLKVKDARTSQLQSTQDESTKME-KKAEDDVISNEE 338
+ NI G IA+ G++LY+Y + + +++ S + ++ E D + N E
Sbjct: 538 RDPFSWRNILGILIAMIGMILYSYYCTLENQQKTVEAASQSSQCFQAREDESDPLMNVE 714
>TC225305 similar to UP|CPTR_PEA (P21727) Triose phosphate/phosphate
translocator, chloroplast precursor (CTPT) (p36) (E30),
complete
Length = 1707
Score = 70.5 bits (171), Expect = 1e-12
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 16/317 (5%)
Frame = +3
Query: 40 LYFNFPFPITLTMIHMAFSGAVAFVLIRV-LKVVSPIKMTLHIYATCVVPISAFFAASLW 98
+Y FP+P +++IH+ A V V L +PI L ++P++ A
Sbjct: 453 IYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNL---LKLLIPVAVCHALGHV 623
Query: 99 FGNTAYLFISVAFIQMLKALMPVATFLVAVTLGTEKLRCDVFWNMVLVSVGVVISSYGEI 158
N ++ ++V+F +KAL P + + + + ++ ++ V +GV ++S E+
Sbjct: 624 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTEL 803
Query: 159 HFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLY-YIAPCSFVFLFIPWYIL 217
FN +G + + I+ R + + KK +T T++Y YI+ + + P IL
Sbjct: 804 SFNWVGFISAMISNISFTYRSIYS-----KKAMTDMDSTNIYAYISIIALIVCIPPAVIL 968
Query: 218 EKPEM-----EDPHMQFN--------FWI-FFSNALCALALNLSTFLVIGRTGAVTIRVA 263
E P + D + FW+ F + +A N + R +T V
Sbjct: 969 EGPTLLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATN-----TLERVAPLTHAVG 1133
Query: 264 GVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLYNYLKVKDARTSQLQSTQDEST 323
VLK +I S ++F +KI+ G AIA++GV LY+++K + E
Sbjct: 1134NVLKRVFVIGFSIIVF-GNKISTQTGIGTAIAIAGVALYSFIKAR-----------MEEE 1277
Query: 324 KMEKKAEDDVISNEETL 340
K + KA +V++ E+ L
Sbjct: 1278KRQAKAA*EVVNLEDVL 1328
>TC228463 similar to GB|AAR24728.1|38603966|BT010950 At4g09810 {Arabidopsis
thaliana;} , partial (94%)
Length = 1479
Score = 46.2 bits (108), Expect(2) = 1e-08
Identities = 42/195 (21%), Positives = 86/195 (43%), Gaps = 5/195 (2%)
Frame = +1
Query: 113 QMLKALMPVATFLVAVTLGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVIGTVYQVTGI 172
Q+ K M + L+ V L + D ++ +V +GV + + ++ N G + +
Sbjct: 538 QIAKLSMIPVSCLLEVVLDKIRYSRDTKLSIGVVLMGVGVCTVTDVSVNGRGFIAAFIAV 717
Query: 173 IAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFL-----FIPWYILEKPEMEDPHM 227
+ +++ L +K +L+ L + AP L F+ +++ K +
Sbjct: 718 WSTSMQQYYVHFLQRK--YSLSSFNLLGHTAPAQAASLLLLGPFLDYWLTNKRVDRYDYN 891
Query: 228 QFNFWIFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGL 287
+ F + A+ NLS F+ IGR AV+ +V G +K L++ + F + +
Sbjct: 892 TASLIFIFLSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKEGLNLQ 1071
Query: 288 NITGYAIALSGVVLY 302
+ G IA++G++ Y
Sbjct: 1072VVFGMIIAVAGMIWY 1116
Score = 30.4 bits (67), Expect(2) = 1e-08
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = +3
Query: 26 SSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKVVSPIKMTLHIYATC 85
S G+I+ NK ++++ + F F TLT +H A + + V++R+L V P H+
Sbjct: 219 SVGIIIVNKALMAS--YGFSFATTLTGMHFA-TTTLMTVVLRMLGYVQP----SHLPLPD 377
Query: 86 VVPISAFFAASLWFGNTAYLFISVAFIQM 114
++ F S+ N + ++ SV F Q+
Sbjct: 378 LLKFVLFANFSIVGMNVSLMWNSVGFYQV 464
>TC203981 similar to UP|Q9FFJ6 (Q9FFJ6) Phosphate/phosphoenolpyruvate
translocator protein-like, partial (42%)
Length = 634
Score = 55.5 bits (132), Expect = 4e-08
Identities = 37/129 (28%), Positives = 66/129 (50%), Gaps = 8/129 (6%)
Frame = +3
Query: 186 LQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEM--------EDPHMQFNFWIFFSN 237
L +G LN + L Y+AP + VFL I+E+ + +D + W N
Sbjct: 3 LASEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDSKI---IWYLLFN 173
Query: 238 ALCALALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALS 297
+ A +NL+ FLV T A+T++V G K + + +S ++F + ++ + GY++ +
Sbjct: 174 SALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIF-RNPVSVTGMMGYSLTVF 350
Query: 298 GVVLYNYLK 306
GV+LY+ K
Sbjct: 351 GVILYSEAK 377
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.327 0.139 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,173,016
Number of Sequences: 63676
Number of extensions: 235281
Number of successful extensions: 2393
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 2329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2373
length of query: 369
length of database: 12,639,632
effective HSP length: 99
effective length of query: 270
effective length of database: 6,335,708
effective search space: 1710641160
effective search space used: 1710641160
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0143b.3