Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0135.3
         (361 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC231109 weakly similar to UP|Q9LUP7 (Q9LUP7) Gb|AAD25583.1, par...   105  3e-23
BM121480                                                               67  1e-11
TC232958                                                               67  2e-11
TC234332                                                               64  8e-11
BI787361                                                               64  8e-11
BG404995 similar to GP|22831068|dbj OJ1131_E05.32 {Oryza sativa ...    63  2e-10
TC211805 similar to UP|Q9K6E7 (Q9K6E7) BH3782 protein, partial (...    63  2e-10
TC233794 similar to GB|AAP37713.1|30725382|BT008354 At3g23880 {A...    62  4e-10
TC218059 weakly similar to UP|Q84KQ9 (Q84KQ9) F-box, partial (7%)      62  5e-10
AI443156                                                               59  4e-09
AW395660                                                               58  6e-09
TC219822 homologue to UP|CENB_HUMAN (P07199) Major centromere au...    57  1e-08
TC235149                                                               52  4e-07
TC223618                                                               50  2e-06
TC233972 weakly similar to GB|AAP37713.1|30725382|BT008354 At3g2...    48  8e-06
TC213957 similar to GB|AAP37713.1|30725382|BT008354 At3g23880 {A...    48  8e-06
BM143422                                                               47  2e-05
TC216702 similar to UP|Q9LDP5 (Q9LDP5) FLORICAULA/LEAFY-like pro...    46  2e-05
TC220267 similar to UP|Q6K235 (Q6K235) F-box-like protein, parti...    40  0.001
TC234892 weakly similar to UP|Q7QIA5 (Q7QIA5) AgCP3966 (Fragment...    36  0.024

>TC231109 weakly similar to UP|Q9LUP7 (Q9LUP7) Gb|AAD25583.1, partial (8%)
          Length = 1061

 Score =  105 bits (262), Expect = 3e-23
 Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 14/299 (4%)
 Frame = +3

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAYLQSL 66
           LP E+  EILS LPVKS++R R   K W+SII    F+  HL++S S+      ++L SL
Sbjct: 93  LPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFVLFHLNKSHSSLILRHRSHLYSL 272

Query: 67  -ITSPRKS---RSASTIAIPDDYDFCGTCNGLVCLHSSKYDRKDKYTSHVRLWNPAMRS- 121
            + SP ++    S   +   +     G+ NGL+C+ +   D        + LWNP +R  
Sbjct: 273 DLKSPEQNPVELSHPLMCYSNSIKVLGSSNGLLCISNVADD--------IALWNPFLRKH 428

Query: 122 -------MSQRSPPLYLPIVYDSYFGFDYDSSTDTYKVVAVA--VALSWDTLETMVNVYN 172
                    +    L+   VY    GF + S ++ YK++++   V L   T ++ V +Y 
Sbjct: 429 RILPADRFHRPQSSLFAARVY----GFGHHSPSNDYKLLSITYFVDLQKRTFDSQVQLYT 596

Query: 173 IGDDTCWRTIPVSHLPSMYLKDDDAVYVNNTLNRLAILPNVEDRDRCTILSFDFGKESCA 232
           +  D+ W+ +P S   ++       V+V+ +L+ L +   ++  +   I+SFD  +E+  
Sbjct: 597 LKSDS-WKNLP-SMPYALCCARTMGVFVSGSLHWL-VTRKLQPHEPDLIVSFDLTRETFH 767

Query: 233 QLPLPYCPQSRYDFYRTWPTLGVLRDCLCICQKDKNMHFVVWQMKEFGLYKSWTLLFNI 291
           ++PLP      +D       + +L  CLC+ +  +   F VW M+ +G   SW  LF +
Sbjct: 768 EVPLPVTVNGDFDM-----QVALLGGCLCVVE-HRGTGFDVWVMRVYGSRNSWEKLFTL 926


>BM121480 
          Length = 917

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 70/259 (27%), Positives = 114/259 (43%), Gaps = 2/259 (0%)
 Frame = +3

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAYLQSL 66
           LP+EL  EIL  LPVKSL+RF+CV   +K+   D  +  L L  S    R  DF     +
Sbjct: 66  LPQELIREILLRLPVKSLLRFKCV--LFKTCSRDVVYFPLPL-PSIPCLRLDDFGIRPKI 236

Query: 67  ITSPRKSRSASTIAIPDDYDFCGTCNGLVCLHSSKYDRKDKYTSHVRLWNPAMRSMSQRS 126
           +                     G+C GLV L+   YD     ++++ LWNP++     + 
Sbjct: 237 L---------------------GSCRGLVLLY---YDD----SANLILWNPSLG--RHKX 326

Query: 127 PPLYLPIVYDSYFGFDYDSSTDTYKVVAVAVALSWDTLETMVNVYNIGDDTCWRTIPVSH 186
            P Y   +    +GF YD S D Y  + + + L     ET  ++Y+   ++ W+T  + +
Sbjct: 327 LPNYRDDITSFPYGFGYDESKDEY--LLILIGLPKFGPETGADIYSFKTES-WKTDTIVY 497

Query: 187 LP-SMYLKDDDAVYVNNTLN-RLAILPNVEDRDRCTILSFDFGKESCAQLPLPYCPQSRY 244
            P   Y  +D      + LN  L      E +    I++FD  + + + +PLP   +S  
Sbjct: 498 DPLXRYXAEDXIARAGSLLNGALHWFVFSESKXDHVIIAFDLVERTLSXIPLPLADRSTV 677

Query: 245 DFYRTWPTLGVLRDCLCIC 263
                +  L ++  CL +C
Sbjct: 678 QKDAVY-GLKIMGXCLXVC 731


>TC232958 
          Length = 758

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 53/166 (31%), Positives = 72/166 (42%), Gaps = 19/166 (11%)
 Frame = +1

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLH-----------LHRSSSTT 55
           LP++L  EIL  LPVKSLVRF+ V KSW  +ISD +F K H           L  +SS  
Sbjct: 61  LPQDLITEILLRLPVKSLVRFKSVCKSWLFLISDPRFAKSHFDLFAALADRILFIASSAP 240

Query: 56  RNTDFAYLQSLITSPRKSRSASTIAIPDDY----DFCGTCNGLVCLHSSKYDRKDKYTSH 111
                 +  SL            +  P  Y    +  G+C G + LH           SH
Sbjct: 241 ELRSIDFNASLHDDSASVAVTVDLPAPKPYFHFVEIIGSCRGFILLHC---------LSH 393

Query: 112 VRLWNP--AMRSMSQRSPPLYL--PIVYDSYFGFDYDSSTDTYKVV 153
           + +WNP   +  +   SP  +    + +    GF YD STD + VV
Sbjct: 394 LCVWNPTTGVHKVVPLSPIFFNKDAVFFTLLCGFGYDPSTDDFLVV 531


>TC234332 
          Length = 644

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 55/179 (30%), Positives = 78/179 (42%), Gaps = 14/179 (7%)
 Frame = +2

Query: 196 DAVYVNNTLNRLAILPNVEDR-------DRCTILSFDFGKESCAQLPLPYCPQSRYDFYR 248
           D   V  T+N LA+  +  D        D   I S+D   ES   L +P       +   
Sbjct: 17  DGASVRGTVNWLALPNSSSDYQWETVTIDDLVIFSYDLKNESYRYLLMP---DGLLEVPH 187

Query: 249 TWPTLGVLRDCLCICQKDKNMHFVVWQMKEFGLYKSWTLLFNIAGYAYDIPCRFF----A 304
           + P L VL+ CLC+  +    HF  W MKEFG+ KSWT   NI+     I   F      
Sbjct: 188 SPPELVVLKGCLCLSHRHGGNHFGFWLMKEFGVEKSWTRFLNISYDQLHIHGGFLDHPVI 367

Query: 305 MYMSENGDALLLSKLAVSQPQAVLYTQKDNKLEV---TDVANYIFNCYAMNYIESLVPP 360
           + MSE+   +LL        + +LY ++DN +E     D   + F  Y  +Y +S V P
Sbjct: 368 LCMSEDDGVVLLEN--GGHGKFILYNKRDNTIECYGELDKGRFQFLSY--DYAQSFVMP 532


>BI787361 
          Length = 423

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
 Frame = +3

Query: 23  SLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTR---------NTDFAY--------LQS 65
           +L+RFR VS++W S+I D  F+KLHL RS   T          + D           ++ 
Sbjct: 3   ALMRFRYVSETWNSLIFDPTFVKLHLERSPKNTHVLLEFQAIYDRDVGQQVGVAPCSIRR 182

Query: 66  LITSPRKSRSASTIAIPDDYDFCGTCNGLVCLHSSKYDRKDKYTSHVRLWNPAMRSMSQR 125
           L+ +P  +               G+CNGLVC+      R+ +     RLWNPA   MS+ 
Sbjct: 183 LVENPSFTIDDCLTLFKHTNSIFGSCNGLVCMTKCFDVREFEEECQYRLWNPATGIMSEY 362

Query: 126 SPPL 129
           SPPL
Sbjct: 363 SPPL 374


>BG404995 similar to GP|22831068|dbj OJ1131_E05.32 {Oryza sativa (japonica
           cultivar-group)}, partial (8%)
          Length = 394

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
 Frame = +1

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNT-------- 58
           LP E+  EILS LPV+SL+RFR  SKSWKS+I       LHL RS +   NT        
Sbjct: 40  LPREVLTEILSRLPVRSLLRFRSTSKSWKSLIDSQHLNWLHLTRSLTLASNTSLILRVDS 219

Query: 59  DFAYLQSLITSPRKSRSASTIAIPDDYDFCGTCNGLVCL 97
           D          P  S +   +   +     G+CNGL+C+
Sbjct: 220 DLYQTNFPTLDPPVSLNHPLMCYSNSITLLGSCNGLLCI 336


>TC211805 similar to UP|Q9K6E7 (Q9K6E7) BH3782 protein, partial (13%)
          Length = 693

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
 Frame = +1

Query: 253 LGVLRDCLCICQKDKNMHFVVWQMKEFGLYKSWTLLFNI------AGYAYDIPCRFFAMY 306
           LGVL+ CLC+    K  HFVVW MK++G  +SW  L +I        ++Y  P      Y
Sbjct: 4   LGVLQGCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGP-----YY 168

Query: 307 MSENGDALLLSKLAVSQPQAVLYTQKDNKLEVTDVANYIFNCYAMNYIESLVPP 360
           +SENG+ LL+ +        +LY  +DN  +   + +      A  Y+E+LV P
Sbjct: 169 ISENGEVLLMFEF-----DLILYNPRDNSFKYPKIESGKGWFDAEVYVETLVSP 315


>TC233794 similar to GB|AAP37713.1|30725382|BT008354 At3g23880 {Arabidopsis
           thaliana;} , partial (9%)
          Length = 449

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 21/113 (18%)
 Frame = +1

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTT-----RNTDFA 61
           LP+EL  EIL  LPVKSL+RF+CV KS+ S+ISD QF+  H   ++S T     R+ DF 
Sbjct: 109 LPQELIREILLRLPVKSLLRFKCVCKSFLSLISDPQFVISHYALAASPTHRLILRSHDF- 285

Query: 62  YLQSLIT-SPRKSRSASTIAIP-----------DDY----DFCGTCNGLVCLH 98
           Y QS+ T S  K+ S   +  P           DD+       G+C GLV L+
Sbjct: 286 YAQSIATESVFKTCSRDVVYFPLPLPSIPCLRLDDFGIRPKILGSCRGLVLLY 444


>TC218059 weakly similar to UP|Q84KQ9 (Q84KQ9) F-box, partial (7%)
          Length = 1185

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 73/321 (22%), Positives = 124/321 (37%), Gaps = 34/321 (10%)
 Frame = +3

Query: 5   QFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIK----------------LHL 48
           + LP EL   +LS LP K L+  +CV KSW  +I+D  F+                 L +
Sbjct: 60  EHLPGELVSNVLSRLPSKVLLLCKCVCKSWFDLITDPHFVSNYYVVYNSLQSQEEHLLVI 239

Query: 49  HRSSSTTRNTDFAYLQSLITSPRKSRSASTIAIPDDY--------DFCGTCNGLVCLHSS 100
            R   +   T  + L      P+K  S+  +  P +Y        +  G CNG+  L  +
Sbjct: 240 RRPFFSGLKTYISVLSWNTNDPKKHVSSDVLNPPYEYNSDHKYWTEILGPCNGIYFLEGN 419

Query: 101 KYDRKDKYTSHVRLWNPAMRSMSQRSPPLYLPIVYDSYFGFDYDSSTDTYKVVAVAVALS 160
                +      +    A+      SP  +    +  Y GF +D  T+ YKVV +     
Sbjct: 420 PNVLMNPSLGEFK----ALPKSHFTSP--HGTYTFTDYAGFGFDPKTNDYKVVVLKDLWL 581

Query: 161 WDTLETMV-----NVYNIGDDTCWRTIPVSHLP---SMYLKDDDAVYVNNTLNRLAILPN 212
            +T E  +      +Y++  ++ WR +  S LP    ++       Y NN  +    +  
Sbjct: 582 KETDEREIGYWSAELYSLNSNS-WRKLDPSLLPLPIEIWGSSRVFTYANNCCHWWGFVEE 758

Query: 213 VEDRDRCTILSFDFGKESCAQLPLPYCPQSRYDFYRTWPTL--GVLRDCLCICQKDKNMH 270
             D  +  +L+FD  KES  ++ +P    S  + + T            L    +     
Sbjct: 759 -SDATQDVVLAFDMVKESFRKIRVPKIRDSSDEKFGTLVPFEESASIGFLVYPVRGTEKR 935

Query: 271 FVVWQMKEFGLYKSWTLLFNI 291
           F VW MK++    SW   +++
Sbjct: 936 FDVWVMKDYWDEGSWVKQYSV 998


>AI443156 
          Length = 414

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 41/116 (35%), Positives = 57/116 (48%), Gaps = 5/116 (4%)
 Frame = +3

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRS--SSTTRNTDFAY-- 62
           LP E+  EILS LPVKS++R R   K W+SII    FI  HL++S  S   R+    Y  
Sbjct: 90  LPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFILFHLNKSHTSLILRHRSQLYSL 269

Query: 63  -LQSLITSPRKSRSASTIAIPDDYDFCGTCNGLVCLHSSKYDRKDKYTSHVRLWNP 117
            L+SL+       S   +   +     G+ NGL+C+ +   D        + LWNP
Sbjct: 270 DLKSLLDPNPFELSHPLMCYSNSIKVLGSSNGLLCISNVXDD--------IALWNP 413


>AW395660 
          Length = 381

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 28/43 (65%), Positives = 34/43 (78%)
 Frame = +3

Query: 3   PPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIK 45
           P  FLP+EL +EILS LPVKSL++FRCV KSW S+I D  F+K
Sbjct: 252 PLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMK 380


>TC219822 homologue to UP|CENB_HUMAN (P07199) Major centromere autoantigen B
           (Centromere protein B) (CENP-B), partial (5%)
          Length = 710

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = +1

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSS 53
           LPE L +EIL W+ V + ++ RCV K WKS++ D QF+K HLH S S
Sbjct: 196 LPEGLMIEILVWIRVSNPLQLRCVCKRWKSLVVDPQFVKKHLHTSLS 336


>TC235149 
          Length = 435

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
 Frame = +2

Query: 271 FVVWQMKEFGLYKSWTLLFNIA-----GYAYDIPCRFFA-MYMSENGDALLLSKLAVSQP 324
           FVVW  +EFG+ +SWT L N++      +      RF   + MSEN D LLL+    S  
Sbjct: 2   FVVWLTREFGVERSWTRLLNVSYEHFRNHGCPPYYRFVTPLCMSENEDVLLLANDEGS-- 175

Query: 325 QAVLYTQKDNKLE-VTDVANYIFNCYAMNYIESLVPP 360
           + V Y  +DN+++ + D  +Y F+  + +Y+ SLV P
Sbjct: 176 EFVFYNLRDNRIDRIQDFDSYKFSFLSHDYVPSLVLP 286


>TC223618 
          Length = 444

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
 Frame = +1

Query: 89  GTCNGLVCLHSSKYDRKDKYTSHVRLWNPAMRSMSQRSPPL---YLPIVYDSYFGFDYDS 145
           G+CNGL+C  + K D        V LWNP++R +S++SPPL   + P  + + FG  YD 
Sbjct: 133 GSCNGLLCF-AIKGDC-------VLLWNPSIR-VSKKSPPLGNNWRPGCFTA-FGLGYDH 282

Query: 146 STDTYKVVAVAVALSWDTLETMVNVYNIGDDTCWRTI 182
             + YKVVAV    S   +E  V VY++  ++ WR I
Sbjct: 283 VNEDYKVVAVFCDPSEYFIECKVKVYSMATNS-WRKI 390


>TC233972 weakly similar to GB|AAP37713.1|30725382|BT008354 At3g23880
           {Arabidopsis thaliana;} , partial (10%)
          Length = 631

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = -2

Query: 6   FLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDF 60
           FLP+E+ +EIL  LPVKSL  F+ V KS  S+IS+  F K H  R+++ T    F
Sbjct: 543 FLPQEIIIEILLRLPVKSLPSFKFVCKS*LSLISNPHFAKWHFERNAAHTEKLLF 379


>TC213957 similar to GB|AAP37713.1|30725382|BT008354 At3g23880 {Arabidopsis
          thaliana;} , partial (9%)
          Length = 696

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +3

Query: 7  LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRS 51
          LP EL  EIL   PV+S++RF+CV KSW S+ISD QF    L  S
Sbjct: 33 LPLELIREILLRSPVRSVLRFKCVCKSWLSLISDPQFTHFDLAAS 167


>BM143422 
          Length = 424

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +1

Query: 5   QFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQF 43
           Q LP +L   IL  LPVKS+ RF+CV KSW S+ISD QF
Sbjct: 223 QTLPLDLIELILLKLPVKSVTRFKCVCKSWLSLISDPQF 339


>TC216702 similar to UP|Q9LDP5 (Q9LDP5) FLORICAULA/LEAFY-like protein,
           partial (5%)
          Length = 1631

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 49/193 (25%), Positives = 83/193 (42%), Gaps = 13/193 (6%)
 Frame = +3

Query: 112 VRLWNPAMRSMSQRSPPLYLPIVYDSY----------FGFDYDSSTDTYKVVAVA--VAL 159
           +  WNP++R    R  P YLP+    +           GF +D  T  YK+V ++  V L
Sbjct: 30  IAFWNPSLRQ--HRILP-YLPVPRRRHPDTTLFAARVCGFGFDHKTRDYKLVRISYFVDL 200

Query: 160 SWDTLETMVNVYNIGDDTCWRTIPVSHLP-SMYLKDDDAVYVNNTLNRLAILPNVEDRDR 218
              + +  V +Y +  +  W+T+P   LP ++       V+V N+L+ + +   +E    
Sbjct: 201 HDRSFDAQVKLYTLRANA-WKTLP--SLPYALCCARTMGVFVGNSLHWV-VTRKLEPDQP 368

Query: 219 CTILSFDFGKESCAQLPLPYCPQSRYDFYRTWPTLGVLRDCLCICQKDKNMHFVVWQMKE 278
             I++FD   +   +LPLP        F      L +L   LC+          VW M+E
Sbjct: 369 DLIIAFDLTHDIFRELPLPDTGGVDGGFEID---LALLGGSLCMTVNFHKTRIDVWVMRE 539

Query: 279 FGLYKSWTLLFNI 291
           +    SW  +F +
Sbjct: 540 YNRRDSWCKVFTL 578


>TC220267 similar to UP|Q6K235 (Q6K235) F-box-like protein, partial (7%)
          Length = 586

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +2

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFI 44
           LP++L   IL++LP+ S+ R  CVSK W  I++  +F+
Sbjct: 338 LPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFV 451


>TC234892 weakly similar to UP|Q7QIA5 (Q7QIA5) AgCP3966 (Fragment), partial
           (4%)
          Length = 370

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 18/49 (36%), Positives = 31/49 (62%)
 Frame = -2

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTT 55
           LP+EL   I   L +  ++R + ++KS+  IISD+ F++ +   S+STT
Sbjct: 243 LPQELIQNIFLSLVLPEIIRLKLLNKSFSRIISDNTFVRQYNSLSTSTT 97


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.323    0.137    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,467,034
Number of Sequences: 63676
Number of extensions: 332928
Number of successful extensions: 1672
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of query: 361
length of database: 12,639,632
effective HSP length: 98
effective length of query: 263
effective length of database: 6,399,384
effective search space: 1683037992
effective search space used: 1683037992
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)


Lotus: description of TM0135.3