
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.7
(734 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich prote... 46 7e-05
TC210023 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 ... 46 7e-05
TC218421 similar to GB|AAQ65192.1|34365761|BT010569 At3g08670 {A... 45 1e-04
TC233873 weakly similar to UP|Q6ZJC8 (Q6ZJC8) BHLH protein famil... 45 2e-04
CA938779 similar to GP|10177876|dbj contains similarity to prote... 44 3e-04
TC207437 similar to UP|O81922 (O81922) Proline-rich protein, par... 43 6e-04
CF921716 42 0.001
TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell... 42 0.001
TC231868 similar to UP|Q93424 (Q93424) C. elegans GRL-23 protein... 41 0.002
TC218196 41 0.002
TC214511 weakly similar to PIR|C85356|C85356 glycine-rich protei... 41 0.002
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 40 0.003
TC218213 similar to UP|Q9LK27 (Q9LK27) Gb|AAF01563.1, partial (21%) 40 0.003
TC226467 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 40 0.005
TC225016 similar to UP|Q39835 (Q39835) Extensin, partial (32%) 40 0.005
TC211828 similar to UP|RPIA_ARATH (Q9ZU38) Probable-ribose 5-pho... 39 0.006
TC227732 similar to UP|Q6P623 (Q6P623) Fibrillarin, partial (16%) 39 0.008
BM954311 weakly similar to GP|21322711|e pherophorin-dz1 protein... 39 0.008
TC230795 weakly similar to UP|O23299 (O23299) Carnitine racemase... 39 0.008
TC223505 similar to UP|Q9FJR9 (Q9FJR9) Similarity to maturase-re... 39 0.011
>TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich protein, partial
(20%)
Length = 1041
Score = 45.8 bits (107), Expect = 7e-05
Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 1/173 (0%)
Frame = -2
Query: 319 LPISTLLNRTATQLTPILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPT 378
LP +T + + TP+ QP SPP + P P N+ P P +P+
Sbjct: 944 LPPTTPTATSPSSSTPLAVTQPPTVVASPPTTST-----PPTTSQPPANVAPKPAPVKPS 780
Query: 379 SPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERP-ALPSPRRYPRPRPERLVDPDH 437
+P +S + P + P+P P+PS S P P A P P P+ P P
Sbjct: 779 APKVAPASSPKAPPPQIPIPQP-PKPSPVSPPPLPPPPVASPPPLPPPKIAPTPAKTPPS 603
Query: 438 PIQADPLHEADPLAQQVQPDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSEP 490
P A P + P P+ P P ++ +P P +E P
Sbjct: 602 PAPAKATPAPAPAPTKPAP---TPSPVPPPP-------AATPAPAPVIEVPAP 474
>TC210023 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 protein
(Corresponding sequence ZK643.8), partial (12%)
Length = 819
Score = 45.8 bits (107), Expect = 7e-05
Identities = 41/156 (26%), Positives = 59/156 (37%)
Frame = -3
Query: 334 PILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPI 393
P+L P PP P P + PL+N+ P P P P P+
Sbjct: 445 PLLSNLFPHPPPQPPQPP------PQPPQPPLFNIDPHPPPQPPPQPAP----QPPQPPL 296
Query: 394 ILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQ 453
++ P+P P+P A +RP P ++P+P P+ P P PL P
Sbjct: 295 LIKFPQPPPQPPQ----PAPQRPQPPLLIKFPQPPPQPAPQPPQP----PLLIKFP---- 152
Query: 454 VQPDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSE 489
Q P QP P+ + S P P +E S+
Sbjct: 151 -------QPPPQPAPQPPL----STAFPQPPMEISD 77
Score = 35.0 bits (79), Expect = 0.12
Identities = 29/107 (27%), Positives = 41/107 (38%)
Frame = -3
Query: 339 QPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQP 398
QPA QP PP + F QP Q P P P P+ I++ +P P
Sbjct: 328 QPAPQPPQPPLLIK--FPQPPPQPPQ-------PAPQRPQPPLLIKFPQPPPQPA----P 188
Query: 399 EPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLH 445
+P P P+ +PA P P+P + + I + LH
Sbjct: 187 QPPQPPLLIKFPQPPPQPAPQPPLSTAFPQPPMEISDLYVIPSSSLH 47
>TC218421 similar to GB|AAQ65192.1|34365761|BT010569 At3g08670 {Arabidopsis
thaliana;} , partial (46%)
Length = 1256
Score = 45.1 bits (105), Expect = 1e-04
Identities = 67/284 (23%), Positives = 109/284 (37%), Gaps = 57/284 (20%)
Frame = +1
Query: 251 PDAPSDGDAP----PPKKKKKQVRIVEKPTRV--------EPAAQVIRMKTSARVTRSAV 298
P PS+G++ PP++ + K +R+ PA++ R S+ VTRS++
Sbjct: 142 PVFPSEGESQTTLAPPRRSLTRSTSTSKTSRLAVSQSENNNPASRPAR---SSSVTRSSI 312
Query: 299 QSSSKCVVTESNDDLNSLDALPISTLLNRTATQLTPILEFQPAEQPTSPPNSPRSSFFQP 358
+S + S++ +S S ++ +PI + +P++P + P +S
Sbjct: 313 STSHSQYSSYSSNRHSSSILNTSSASVSSYIRPSSPITRSSSSARPSTPSSRPTASRSST 492
Query: 359 SQQEAPLWNML---------QTPRPSEPTSPITIQYN---SLTSEPIILDQPE------- 399
+ P+ Q RPS P+S I N S L +P
Sbjct: 493 PSKPRPVSTSSTAERNRPSSQGSRPSTPSSRPHIPANLHSPSASSTRSLSRPSTPTRRSS 672
Query: 400 -----PEPRPSDHSVPRA------------SERPALPSPRRYPRPRPERLVDPDHPIQAD 442
P P P+ S+ A + RP+ PSPR P P+P +V PD P++
Sbjct: 673 MPSLSPSPSPTIGSLTSAGRVSSNGRNSAPASRPSSPSPRVRPPPQP--IVPPDFPLETP 846
Query: 443 P-----LHEADPLAQQVQPDQV----QQEPIQPEPETSVSNHSS 477
P L + A + +P V Q P T HSS
Sbjct: 847 PNLRTTLPDRPVSAGRSRPGGVTMKTNSSETQASPVTMPRRHSS 978
>TC233873 weakly similar to UP|Q6ZJC8 (Q6ZJC8) BHLH protein family-like,
partial (25%)
Length = 817
Score = 44.7 bits (104), Expect = 2e-04
Identities = 39/105 (37%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Frame = -2
Query: 340 PAEQPT-----SPPNSPRSSFFQPSQQ-EAPLWNMLQTPRPSEPTSPITIQYNSLTSEPI 393
PA QP +PP SSF QPS PLW EPT + + S S P
Sbjct: 609 PAPQPPLLPFPTPPPQHSSSFPQPSSSPREPLW--------PEPTGSLGTRPGSDRSGP- 457
Query: 394 ILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHP 438
P PS SVPR R PSPRR P PE + P P
Sbjct: 456 -----RSTPSPSPASVPRPRRRSNSPSPRRTP---PETAMPPTGP 346
Score = 31.2 bits (69), Expect = 1.7
Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 14/130 (10%)
Frame = -2
Query: 410 PRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQVQQEPIQPEPE 469
P + P PS + P P+P L P P P H + QP +EP+ PEP
Sbjct: 651 PPKPDSPPQPS-KPVPAPQPPLLPFPTPP----PQHSSS----FPQPSSSPREPLWPEPT 499
Query: 470 TSV-----SNHSSVRS---------PHPQVETSEPNLGTSEPNVQTFDVGSPQGASEANS 515
S+ S+ S RS P P+ ++ P+ + P P G +
Sbjct: 498 GSLGTRPGSDRSGPRSTPSPSPASVPRPRRRSNSPSPRRTPPETAM----PPTGPNPVRR 331
Query: 516 SNHPTSPETN 525
TSP T+
Sbjct: 330 CARSTSPRTS 301
>CA938779 similar to GP|10177876|dbj contains similarity to protein
kinase~gene_id:MIO24.10 {Arabidopsis thaliana}, partial
(6%)
Length = 434
Score = 43.9 bits (102), Expect = 3e-04
Identities = 33/107 (30%), Positives = 40/107 (36%), Gaps = 8/107 (7%)
Frame = -3
Query: 404 PSDHSVPRASERPALPSPRRYPRPRPERLVDPD-------HPIQADPLHEADPLAQQVQP 456
P HS S+ PA P R P P P + P HP P +
Sbjct: 372 PPSHSAHYPSQTPARPQRRTPPNPSPAKSSPPSPAKAIAPHPNHHPP*KHYEHSPPIHNH 193
Query: 457 DQVQQEPIQPEPETSVSNH-SSVRSPHPQVETSEPNLGTSEPNVQTF 502
Q QQ+P P P +S S H P PQ +TSE TS+ F
Sbjct: 192 QQQQQQPPPPPPSSSSSLHYQHSHIPEPQFQTSESPSSTSQAQSPQF 52
>TC207437 similar to UP|O81922 (O81922) Proline-rich protein, partial (65%)
Length = 1179
Score = 42.7 bits (99), Expect = 6e-04
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +3
Query: 370 QTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPALP-SPRRYPRPR 428
Q +P EP P Q +P ++P+ P+P + P+ E+P P P+ +P+
Sbjct: 324 QPEKPKEPEKPKEPQKPKEPEKPKEPEKPKEPPKPKEPEKPKEPEKPKEPEKPKEPEKPK 503
Query: 429 -PERLVDPDHPIQADPLHEADPLAQQVQPDQVQQEPIQPEPETSV 472
PE+ +P+ P + + P V P V P QP P V
Sbjct: 504 EPEKPKEPEKPKEPEKPKPECPPPVPVCPAPVPVCPPQPTPPPPV 638
Score = 40.0 bits (92), Expect = 0.004
Identities = 24/106 (22%), Positives = 51/106 (47%), Gaps = 4/106 (3%)
Frame = +3
Query: 368 MLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPALP-SPRRYPR 426
+++ P+P P P ++P+ +P + P+ E+P P P+ P+
Sbjct: 291 IVEPPKPKPPPQP---------------EKPKEPEKPKEPQKPKEPEKPKEPEKPKEPPK 425
Query: 427 PR-PERLVDPDHPIQADPLHEADPLAQQVQPDQVQ--QEPIQPEPE 469
P+ PE+ +P+ P + + E + + +P + + +EP +P+PE
Sbjct: 426 PKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKPE 563
Score = 30.0 bits (66), Expect = 3.8
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 219 KKKVAPAHEDTSDEKKKKKADKSKRKHEESTKPDAPSDGDAPPPKKKKKQVRIVEKPTRV 278
K K P E + +K K+ K K E KP P PP K+ ++ + EKP
Sbjct: 306 KPKPPPQPEKPKEPEKPKEPQKPK----EPEKPKEPEKPKEPPKPKEPEKPKEPEKPKEP 473
Query: 279 E 279
E
Sbjct: 474 E 476
>CF921716
Length = 367
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 213 KKMGLVKKKVAPAHEDTSDEKKKKKADKSKRKHEESTKPDAPSDGDAP-PPKKKKKQ 268
KK KKK P H +KKKK+ +K K++ E P AP PP+ KKK+
Sbjct: 61 KKKNAKKKKGGPPHGKKKKKKKKKRGEKKKKRRGEKQNPPREKKKTAPHPPRGKKKK 231
Score = 40.4 bits (93), Expect = 0.003
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 213 KKMGLVKKKVAPAHEDTSDEKKKKKADKSKRKHEESTKPDAPSDGDAPPP---KKKKK 267
KK KKK +KKKKK K K+K TKP D PPP KKKKK
Sbjct: 60 KKKKRKKKKGGAPPRKKKKKKKKKKGGKKKKKKGGKTKPPPGKKKDGPPPPAGKKKKK 233
Score = 37.0 bits (84), Expect = 0.031
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +3
Query: 210 TSLKKMGLVKKKVAPAHEDTSDEKKKKKADKSKRKHEESTKPDAPSDGDAPPPKKKKKQ 268
T KK KK AP + +KKKK K K+K ++ P PPP KKK+
Sbjct: 54 THKKKKRKKKKGGAPPRKKKKKKKKKKGGKKKKKKGGKTKPPPGKKKDGPPPPAGKKKK 230
Score = 31.2 bits (69), Expect = 1.7
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Frame = +2
Query: 219 KKKVAPAHEDTSDEKKK-----------KKADKSKRKHEESTKPDAPSDGDAPPPKKKKK 267
KKK P HE + +KKK +K K K+K K PP KKK++
Sbjct: 20 KKKFLPPHEKKNPQKKKTQKKKRGGPPTEKKKKKKKKKGGKKKKKEGGKNKTPPGKKKRR 199
Score = 29.6 bits (65), Expect = 5.0
Identities = 15/38 (39%), Positives = 19/38 (49%)
Frame = +3
Query: 231 DEKKKKKADKSKRKHEESTKPDAPSDGDAPPPKKKKKQ 268
++KKKK +K K G APP KKKKK+
Sbjct: 9 EKKKKKNFYPPTKKKTHKKKKRKKKKGGAPPRKKKKKK 122
>TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell wall
protein gp1 precursor (Hydroxyproline-rich glycoprotein
1), partial (13%)
Length = 1409
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 13/122 (10%)
Frame = +3
Query: 328 TATQLTPILEFQPAEQPTSPPNSPRSSF-FQPSQQEAPLWNMLQ----------TPRPSE 376
+AT +P P+ PT+PP SP S PS AP + +P PS
Sbjct: 264 SATPPSPSATSSPSASPTAPPTSPSPSPPSSPSPPSAPSPSSTAPSPPSASPPTSPSPSP 443
Query: 377 PTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRA--SERPALPSPRRYPRPRPERLVD 434
P+ T NS S P P+ S P A S PA PS + P P P +
Sbjct: 444 PSPASTASANSPASGSPTSRTSPTSPSPTSTSKPPAPSSSSPA*PSSKPSPSPTP---IS 614
Query: 435 PD 436
PD
Sbjct: 615 PD 620
>TC231868 similar to UP|Q93424 (Q93424) C. elegans GRL-23 protein
(Corresponding sequence E02A10.2), partial (23%)
Length = 790
Score = 41.2 bits (95), Expect = 0.002
Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 4/152 (2%)
Frame = -3
Query: 304 CVVTESNDDLNSLDALPISTLLNRTATQLTPILEFQPAEQPTSPPNSPRSSFFQPSQQEA 363
C + N D+++ + S+L + L I P + P PP S+ F +
Sbjct: 563 CAYIQYNSDMHNHETYFSSSLKCSSIPHLLSIRS--PPQPPPQPPQPLLSNLFPHPPPQP 390
Query: 364 PLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPAL---PS 420
P P P P P P+++ P+P P+P P+ + P L P
Sbjct: 389 P------QPPPQPPPQPAP-------QPPLLIKFPQPPPQPP----PQPPQPPPLIKFPQ 261
Query: 421 PRRYPRPRPERL-VDPDHPIQADPLHEADPLA 451
P P P+P L + P P Q P PL+
Sbjct: 260 PPPQPEPQPPLLIIFPQPPPQPAPQPPQPPLS 165
>TC218196
Length = 1095
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/72 (34%), Positives = 36/72 (49%), Gaps = 9/72 (12%)
Frame = +3
Query: 339 QPAEQPTSPPNSPRSSFFQ---PSQQE------APLWNMLQTPRPSEPTSPITIQYNSLT 389
QPA QP P+S + F P+ E PL ++ +P S P SP+ + +
Sbjct: 81 QPAPQPQEHPSSQHNRFSSSSLPTSPENKNITRVPLPSLSHSPNTSPPPSPLALTPSQSR 260
Query: 390 SEPIILDQPEPE 401
SE +I DQPEP+
Sbjct: 261 SETMIPDQPEPK 296
>TC214511 weakly similar to PIR|C85356|C85356 glycine-rich protein [imported]
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(88%)
Length = 1085
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 1/100 (1%)
Frame = -3
Query: 340 PAEQPTSPPNSPRSSFF-QPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQP 398
P P PP P P P + P P P + + L +E + +P
Sbjct: 750 PPPPPPPPPPPPLP*LLPDPDPAREPAYEPASEPAPEPPEPELEDEEAELEAELELEPEP 571
Query: 399 EPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHP 438
EPEP P+ P P P PRP+P P+ P
Sbjct: 570 EPEPDPAPAPAPE-------PLPPPIPRPKPSPSPTPNPP 472
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 40.4 bits (93), Expect = 0.003
Identities = 41/147 (27%), Positives = 50/147 (33%), Gaps = 5/147 (3%)
Frame = +1
Query: 340 PAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPE 399
P Q + PP P S P P++ L P P SP P + P
Sbjct: 208 PPPQHSPPPPPPHSPPPPPPSPPPPVYPYLSPPPPPPVHSP----------PPPVYSPPP 357
Query: 400 PEPRPSDHSVPRASERPALPSPRRYPRPRP--ERLVDPDHPIQADPLHEADPLAQQVQPD 457
P P P P P + P P P P E P P A P H P + P
Sbjct: 358 PPPSPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPSPHPA-PYH--PPPSPSPPPP 528
Query: 458 QVQQE---PIQPEPETSVSNHSSVRSP 481
VQ P P P T V +++S P
Sbjct: 529 PVQYNSPPPPSPPPPTPVYHYNSPPPP 609
Score = 38.5 bits (88), Expect = 0.011
Identities = 42/168 (25%), Positives = 51/168 (30%), Gaps = 7/168 (4%)
Frame = +1
Query: 340 PAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPS-EPTSPITIQYNSLTSEPIILDQP 398
P P+ PP SP P P + P P P P+ Y+S P
Sbjct: 58 PPPPPSPPPPSPTYCVRSPPPPSPPPPSPPPPPPPVFSPPPPVQYYYSS----PPPPQHS 225
Query: 399 EPEPRPSDHSVPRASERPAL------PSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQ 452
P P P P S P + P P P P P P P E P
Sbjct: 226 PPPPPPHSPPPPPPSPPPPVYPYLSPPPPPPVHSPPPPVYSPPPPPPSPPPCIEPPP--- 396
Query: 453 QVQPDQVQQEPIQPEPETSVSNHSSVRSPHPQVETSEPNLGTSEPNVQ 500
P ++ P P P + SPHP P+ P VQ
Sbjct: 397 -PPPPCIEPPPPPPSPPPCEEHSPPPPSPHPAPYHPPPSPSPPPPPVQ 537
Score = 35.4 bits (80), Expect = 0.091
Identities = 34/137 (24%), Positives = 43/137 (30%), Gaps = 7/137 (5%)
Frame = +1
Query: 371 TPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPALPSPRR-YPRPRP 429
+P P P P + P + P P P P S P PSP P P P
Sbjct: 1 SPPPPSPPPP--------SPPPPVYSPPPPPPSPPPPSPTYCVRSPPPPSPPPPSPPPPP 156
Query: 430 ERLVDPDHPIQ------ADPLHEADPLAQQVQPDQVQQEPIQPEPETSVSNHSSVRSPHP 483
+ P P+Q P H P P P P S V SP P
Sbjct: 157 PPVFSPPPPVQYYYSSPPPPQHSPPPPPPHSPPPPPPSPPPPVYPYLSPPPPPPVHSPPP 336
Query: 484 QVETSEPNLGTSEPNVQ 500
V + P + P ++
Sbjct: 337 PVYSPPPPPPSPPPCIE 387
>TC218213 similar to UP|Q9LK27 (Q9LK27) Gb|AAF01563.1, partial (21%)
Length = 1177
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/101 (33%), Positives = 46/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 595 ERDQRIEAARQRFNRRVAMHEQQQRTKLLEAVEEARRKKEQAEEAARQEAAQAENA--RL 652
E +Q+ E AR + + A ++Q + EA EARRK+E EAARQ Q E
Sbjct: 598 EMEQKKEKARLQAEAKAAEDARKQAEE--EAAAEARRKRELEREAARQALLQMEKTVEIN 771
Query: 653 EAERLEVEAEALRGQALAPVVFTPVTSDSTQAPHSAQNVPS 693
E R+ + E LR P P + D T HS + S
Sbjct: 772 ENSRILEDLEMLRA---VPAEQLPSSVDETSPAHSQDGLGS 885
>TC226467 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (6%)
Length = 1017
Score = 39.7 bits (91), Expect = 0.005
Identities = 45/185 (24%), Positives = 65/185 (34%), Gaps = 2/185 (1%)
Frame = +3
Query: 358 PSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRASERPA 417
PS +AP P S PT+P +S T + L P+ + P S+ PA
Sbjct: 36 PSNAQAPA----TAPANSPPTTPAATSPSSGTPLAVTLPPTVVASPPTTSTPPTTSQPPA 203
Query: 418 LPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQVQQ--EPIQPEPETSVSNH 475
+ +P+ P P V P +A P P Q QP +V P P P
Sbjct: 204 IVAPKPAPVTPPAPKVAPASSPKAPP-----PQTPQPQPPKVSPVVTPTSPPP------- 347
Query: 476 SSVRSPHPQVETSEPNLGTSEPNVQTFDVGSPQGASEANSSNHPTSPETNLSIVPYTYLR 535
P P V T P P + +P + A ++ P T + P
Sbjct: 348 ----IPPPPVSTPPP---LPPPKIAPTPAKTPPAPAPAKATPAPAPAPTKPAPTPAPVPP 506
Query: 536 PNSLS 540
P +L+
Sbjct: 507 PPTLA 521
>TC225016 similar to UP|Q39835 (Q39835) Extensin, partial (32%)
Length = 973
Score = 39.7 bits (91), Expect = 0.005
Identities = 40/167 (23%), Positives = 58/167 (33%), Gaps = 13/167 (7%)
Frame = +2
Query: 344 PTSPPNSPRSSFFQ----PSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPE 399
P SPP P+ ++ P ++ P + +P P P ++ P P
Sbjct: 107 PPSPP-PPKPYYYHSPPPPPPKKKPYY--YHSPPPPPPKKKPYYYHSPPPPHPYPHPHPH 277
Query: 400 PEPRPSDHSVPRASERPALPSPRRYPRP-----RPERLVDPDHPIQADPLHEADPLAQQV 454
P P P H P P P YP P +P + P P+ P H P
Sbjct: 278 PYPHPHPHPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPSPPPPVHHYP-HPHPPFVHYS 454
Query: 455 QPDQVQQEPIQPEPETSV----SNHSSVRSPHPQVETSEPNLGTSEP 497
P ++ P P V + H SP P T++P + S P
Sbjct: 455 PPPSPKKPYKYPSPPPPVHPPYTPHPVYHSP-PPPPTNKPYIYASPP 592
>TC211828 similar to UP|RPIA_ARATH (Q9ZU38) Probable-ribose 5-phosphate
isomerase (Phosphoriboisomerase) , partial (47%)
Length = 729
Score = 39.3 bits (90), Expect = 0.006
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 333 TPILEFQPAEQPTSPPN--SPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTS 390
TP P P+S P S +S +PS +P W+ P P P++P T +S
Sbjct: 317 TPASSTPPPPPPSSSPKTTSRKSPPTRPSSTSSPAWSSASAPAPL-PSTPSTASASSSAK 493
Query: 391 E-PIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRP 427
E + P P+P+ P AS PSP P P
Sbjct: 494 ENSKTSSESPPPPKPTTRPSPSAS-----PSPISTPTP 592
Score = 33.1 bits (74), Expect = 0.45
Identities = 40/137 (29%), Positives = 46/137 (33%), Gaps = 13/137 (9%)
Frame = +2
Query: 315 SLDALPISTLLNRTATQLTPILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRP 374
+L A +ST T P + P PP +P SS P P + T R
Sbjct: 215 NLRAWQVSTFFEHPLTLTWPF-PTPISSPPRKPPWTPASSTPPP---PPPSSSPKTTSRK 382
Query: 375 SEPTSPITIQYNSLTSEPIILDQPEPEPRPSDHSVPRA-----------SERPALPSPRR 423
S PT P S TS P P P PS S A SE P P P
Sbjct: 383 SPPTRP------SSTSSPAWSSASAPAPLPSTPSTASASSSAKENSKTSSESPPPPKPTT 544
Query: 424 YPRP--RPERLVDPDHP 438
P P P + P P
Sbjct: 545 RPSPSASPSPISTPTPP 595
>TC227732 similar to UP|Q6P623 (Q6P623) Fibrillarin, partial (16%)
Length = 1693
Score = 38.9 bits (89), Expect = 0.008
Identities = 42/139 (30%), Positives = 51/139 (36%), Gaps = 6/139 (4%)
Frame = -1
Query: 334 PILEFQPAEQP----TSPPNSPRSSF-FQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSL 388
P+L F P + P+SP S FQP P + L PRP P S L
Sbjct: 985 PLLFFHPPLSAPFFQSEGPSSPESLLLFQP-----PD*SFLPLPRPPRPPSD-----PHL 836
Query: 389 TSEPIILDQPEPEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEAD 448
+P + D P P P P P P P R P PR + P P+ PL
Sbjct: 835 PPKPSLSDLPLPPKPPRSPRPPNPPCSPRPPKPPRSPLPRKPLPLKP--PLSEPPLPR*P 662
Query: 449 PLA-QQVQPDQVQQEPIQP 466
PL P + EP P
Sbjct: 661 PLQFPPPTPSEFSFEPSLP 605
>BM954311 weakly similar to GP|21322711|e pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (9%)
Length = 406
Score = 38.9 bits (89), Expect = 0.008
Identities = 35/115 (30%), Positives = 43/115 (36%), Gaps = 1/115 (0%)
Frame = +2
Query: 344 PTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPEPEPR 403
PT PP SP F P P + P PS P ++ P P PR
Sbjct: 71 PTFPPPSPSHPFNPPPP---PSQSFYPPPPPSHFNPPPPPPHSFSPPPPPFRTSPPSPPR 241
Query: 404 PSDHSVPRASERPALPSPRR-YPRPRPERLVDPDHPIQADPLHEADPLAQQVQPD 457
P P+ RP P PR +P P P P P++ PL A PL P+
Sbjct: 242 PFSPPPPKV--RPPPPPPRPIHPSPPP-----PPRPVRPPPLPPA-PLPPSPSPN 382
>TC230795 weakly similar to UP|O23299 (O23299) Carnitine racemase like
protein (AT4g14430/dl3255c), partial (47%)
Length = 749
Score = 38.9 bits (89), Expect = 0.008
Identities = 36/127 (28%), Positives = 47/127 (36%)
Frame = +3
Query: 340 PAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLTSEPIILDQPE 399
PA TS ++P S + PS +P P P+ P+SP +S T+
Sbjct: 27 PANSTTSTASTPPS--YLPSSLRSP--KSSPKPPPAPPSSPPRTADSSATAST------S 176
Query: 400 PEPRPSDHSVPRASERPALPSPRRYPRPRPERLVDPDHPIQADPLHEADPLAQQVQPDQV 459
PRP S P AS A P+P PR P P P PL +Q P +
Sbjct: 177 AGPRPPATSPPPASASAACPTPSAPSSPRSSPSPSPPLP----PSPATPPLPEQSSPSRT 344
Query: 460 QQEPIQP 466
P
Sbjct: 345 TTSSCAP 365
>TC223505 similar to UP|Q9FJR9 (Q9FJR9) Similarity to maturase-related
protein, partial (10%)
Length = 809
Score = 38.5 bits (88), Expect = 0.011
Identities = 27/104 (25%), Positives = 37/104 (34%), Gaps = 4/104 (3%)
Frame = +2
Query: 330 TQLTPILEFQPAEQPTSPPNSPRSSFFQPSQQEAPLWNMLQTPRPSEPTSPITIQYNSLT 389
TQ L + P PP+SP S P+ P P P+ P+T
Sbjct: 101 TQSKYALPYGSKPSPLQPPHSPTSPASSPTSTSGSSLTNAPAPTPPAPSLPVT------P 262
Query: 390 SEPIILDQPEPEPRPSDHSVPRASERPAL----PSPRRYPRPRP 429
S P P PS +V + +P L P+ +P P P
Sbjct: 263 STPPSSTPSSPSATPSSATVSNGTTKPTLSSAPPTTPAFPSPSP 394
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,030,963
Number of Sequences: 63676
Number of extensions: 501698
Number of successful extensions: 7736
Number of sequences better than 10.0: 431
Number of HSP's better than 10.0 without gapping: 4675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5947
length of query: 734
length of database: 12,639,632
effective HSP length: 104
effective length of query: 630
effective length of database: 6,017,328
effective search space: 3790916640
effective search space used: 3790916640
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0134.7