BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0133.9
(538 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206109 similar to UP|Q8VWP9 (Q8VWP9) Fiddlehead-like protein, ... 980 0.0
TC207497 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (80%) 548 e-156
TC217649 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthas... 506 e-144
TC226522 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty aci... 479 e-135
TC230600 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (60%) 442 e-124
TC222174 similar to UP|Q84VI8 (Q84VI8) Beta-ketoacyl-CoA-synthas... 305 4e-83
TC218954 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-lik... 241 8e-64
TC218953 similar to UP|Q84UX3 (Q84UX3) Fatty acid elongase (Frag... 237 9e-63
BM188086 similar to GP|18447765|gb fiddlehead-like protein {Goss... 236 1e-62
TC211403 similar to PIR|F86141|F86141 protein T25K16.11 [importe... 230 1e-60
CA801688 187 8e-48
TC233352 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthas... 186 2e-47
TC226524 similar to UP|Q8VYJ5 (Q8VYJ5) At1g68530/T26J14_10, part... 174 9e-44
TC218955 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-lik... 169 2e-42
AW508265 141 6e-34
TC206110 similar to UP|Q84K36 (Q84K36) Fiddlehead-like protein, ... 135 6e-32
TC234478 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty aci... 122 3e-28
BE023807 115 6e-26
TC226521 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty aci... 75 7e-14
CD412949 similar to PIR|T48449|T484 fatty acid elongase-like pro... 72 5e-13
>TC206109 similar to UP|Q8VWP9 (Q8VWP9) Fiddlehead-like protein, partial
(95%)
Length = 1887
Score = 980 bits (2533), Expect = 0.0
Identities = 483/535 (90%), Positives = 511/535 (95%)
Frame = +1
Query: 4 NSERDMFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGI 63
N+ERD+FSAEIVNRGIE SGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGI
Sbjct: 88 NNERDLFSAEIVNRGIEPSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGI 267
Query: 64 YLFTIPLLLVVFSAEVGSLSKEDLWKKLWEDASYDLASVLASFAVFVFTLSVYFMSKPRP 123
YLFTIP+LLVVFSAEVGSLSKEDLWKKLWEDA YDLA+VLASF VFVFTLSVYFMS+PRP
Sbjct: 268 YLFTIPVLLVVFSAEVGSLSKEDLWKKLWEDARYDLATVLASFGVFVFTLSVYFMSRPRP 447
Query: 124 IYLIDFACYRPEDELKVSREQYIELASKSGKFDEESLAFQKRILMSSGIGDETYIPKAVV 183
IYLIDFACY+P+DELKVSREQ +E+A KSGKFDE SL FQKR+LMSSGIGDETYIPKAV+
Sbjct: 448 IYLIDFACYKPDDELKVSREQLMEVARKSGKFDEASLEFQKRMLMSSGIGDETYIPKAVI 627
Query: 184 SSTTNTATMKEGRAEASTVMFGALDELFEKTGIRPKDIGILVVNCSIFNPTPSLSAMIIN 243
+ST NTATMKEGRAEAS VMFGALDELFEKT +RPKD+G+LVVNCSIFNPTPSLSAMIIN
Sbjct: 628 ASTENTATMKEGRAEASMVMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSAMIIN 807
Query: 244 HYKMRGNILSYNLGGMGCSAGIIGVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSM 303
HYKMRGNILSYNLGGMGCSAGIIGVDLA+DILQ+NPNNYA VVSTEMVG+NWYQGK+RSM
Sbjct: 808 HYKMRGNILSYNLGGMGCSAGIIGVDLAKDILQANPNNYAEVVSTEMVGYNWYQGKDRSM 987
Query: 304 LIPNCFFRMGCSALLLSNRRFDYNRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGL 363
LIPN FFRMGCSA+LLSNRR DY+RAKYRLEHIVRTHKGADDRSFRCVYQEED+QK KGL
Sbjct: 988 LIPNSFFRMGCSAVLLSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQKLKGL 1167
Query: 364 KISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGGKSDGNSSPSMKKPY 423
KISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFG K+ GN SPSMKKPY
Sbjct: 1168KISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGSKNGGN-SPSMKKPY 1344
Query: 424 IPNYKLAFEHFCVHAASKPILDELQRNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYM 483
IP+YKLAFEHFCVHAASK ILDELQRNLELS+KN+EASRMTLHRFGNTSSSSIWYELAYM
Sbjct: 1345IPDYKLAFEHFCVHAASKTILDELQRNLELSDKNIEASRMTLHRFGNTSSSSIWYELAYM 1524
Query: 484 EAKERVRRGDRVWQLAFGSGFKCNSVVWLSMKRVNKPSRNNPWLDCINRYPVSLN 538
EAKE VRRGDRVWQLAFGSGFKCNSVVW +M+RV KPSR NPWLDCINRYP LN
Sbjct: 1525EAKESVRRGDRVWQLAFGSGFKCNSVVWRAMRRVTKPSR-NPWLDCINRYPAPLN 1686
>TC207497 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (80%)
Length = 1665
Score = 548 bits (1412), Expect = e-156
Identities = 261/427 (61%), Positives = 338/427 (79%)
Frame = +2
Query: 111 FTLSVYFMSKPRPIYLIDFACYRPEDELKVSREQYIELASKSGKFDEESLAFQKRILMSS 170
F L++Y +++PR +YL+D AC+RP D LK +++ + +G F++ SL FQ++IL S
Sbjct: 2 FGLTLYAVTRPRAVYLLDSACFRPADHLKAPFRSFMDHSRLTGDFEDSSLEFQRKILERS 181
Query: 171 GIGDETYIPKAVVSSTTNTATMKEGRAEASTVMFGALDELFEKTGIRPKDIGILVVNCSI 230
G+G+ETY+P+A+ S +M RAEA VMFGALD+LF+ T I+PKDIGIL+VNCS+
Sbjct: 182 GLGEETYVPEAM-HSIPPQPSMAAARAEAEQVMFGALDKLFQGTNIKPKDIGILIVNCSL 358
Query: 231 FNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIGVDLARDILQSNPNNYAVVVSTEM 290
FNPTPSLSAMI+N YK+RGNI S+NLGGMGCSAG+I VDLA+D+LQ + N YAVVVSTE
Sbjct: 359 FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTEN 538
Query: 291 VGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRFDYNRAKYRLEHIVRTHKGADDRSFRC 350
+ NWY G ++SMLIPNC FR+GCSALLLSN+ D RAKYRL H+VRTH+GADD++FRC
Sbjct: 539 ITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRC 718
Query: 351 VYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGGK 410
VYQE+DD G+ +SKDL+ I G ALKTNITTLGPLVLP SEQLLFF TL+ LF
Sbjct: 719 VYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMNKLF--- 889
Query: 411 SDGNSSPSMKKPYIPNYKLAFEHFCVHAASKPILDELQRNLELSEKNMEASRMTLHRFGN 470
+ KPYIP++KLAF+HFC+HA + ++DEL++NL+L +++EASRMTLHRFGN
Sbjct: 890 ------KAGVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGN 1051
Query: 471 TSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMKRVNKPSRNNPWLDCI 530
TSSSSIWYELAY+EAK R+++G+R+WQ+AFGSGFKCNS VW +++ V +PS N PW DCI
Sbjct: 1052TSSSSIWYELAYIEAKGRIKKGNRIWQIAFGSGFKCNSAVWQALRNV-RPSPNGPWEDCI 1228
Query: 531 NRYPVSL 537
++YPV +
Sbjct: 1229HKYPVEI 1249
>TC217649 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthase
(AT5g43760/MQD19_11), partial (68%)
Length = 1403
Score = 506 bits (1304), Expect = e-144
Identities = 242/384 (63%), Positives = 304/384 (79%)
Frame = +1
Query: 152 SGKFDEESLAFQKRILMSSGIGDETYIPKAVVSSTTNTATMKEGRAEASTVMFGALDELF 211
+G F EE+L+FQK+IL SG+G +TY+P A++S M R EA VMFGA+D+L
Sbjct: 13 TGSFSEENLSFQKKILERSGLGQKTYLPPAILSLPPRPC-MAAAREEAEQVMFGAIDQLL 189
Query: 212 EKTGIRPKDIGILVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIGVDLA 271
KTG++ KDIGILVVNCS+FNPTPSLSAMI+NHYK+RGN+ SYNLGGMGCSAG+I +DLA
Sbjct: 190 AKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNVFSYNLGGMGCSAGLISIDLA 369
Query: 272 RDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRFDYNRAKY 331
+ +LQ +PN+YA+VVS E + NWY G RSML+ NC FRMG +A+LLSNR D +RAKY
Sbjct: 370 KHLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAILLSNRSGDRHRAKY 549
Query: 332 RLEHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPF 391
+L H VRTHKGADD+S+ CV+QEED+ K G+ +SKDL+ + G+ALKTNITTLGPLVLP
Sbjct: 550 QLVHTVRTHKGADDKSYGCVFQEEDETKRIGVALSKDLMAVAGEALKTNITTLGPLVLPM 729
Query: 392 SEQLLFFATLVWRHLFGGKSDGNSSPSMKKPYIPNYKLAFEHFCVHAASKPILDELQRNL 451
SEQLLFFATLV R +F K KPYIP++KLAFEHFC+HA + +LDEL++NL
Sbjct: 730 SEQLLFFATLVARKVFKMKI---------KPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 882
Query: 452 ELSEKNMEASRMTLHRFGNTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVW 511
ELS+ +ME SRMTL+RFGNTSSSS+WYELAY EAK R+++GDR WQ+AFGSGFKCNS VW
Sbjct: 883 ELSDWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNSAVW 1062
Query: 512 LSMKRVNKPSRNNPWLDCINRYPV 535
+++ +N NNPW+D I+ +PV
Sbjct: 1063RALRTINPAKENNPWMDEIHDFPV 1134
>TC226522 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty acid condensing
enzyme CUT1, partial (79%)
Length = 1582
Score = 479 bits (1233), Expect = e-135
Identities = 231/384 (60%), Positives = 300/384 (77%)
Frame = +3
Query: 154 KFDEESLAFQKRILMSSGIGDETYIPKAVVSSTTNTATMKEGRAEASTVMFGALDELFEK 213
K + +S+ FQ RIL SG+G+ET +P A+ TM+ R EA V+F A+D LF+K
Sbjct: 30 KDNPKSVEFQMRILERSGLGEETCLPPAI-HYIPPKPTMEAARGEAELVIFSAMDSLFDK 206
Query: 214 TGIRPKDIGILVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIGVDLARD 273
TG++PKDI IL+VNCS+F+PTPSLSAM+IN YK+R NI S+NL GMGCSAG+I VDLARD
Sbjct: 207 TGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISVDLARD 386
Query: 274 ILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRFDYNRAKYRL 333
+LQ +PN+ AVVVSTE++ N+YQGKER+ML+PNC FRMG +A+LLSNR + RAKYRL
Sbjct: 387 LLQVHPNSNAVVVSTEIITPNYYQGKERAMLLPNCLFRMGGAAILLSNRTSERRRAKYRL 566
Query: 334 EHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSE 393
H+VRTHKGADD+++RCV++EED + G+ + KDL+ I G+ALK+NITT+GPLVLP SE
Sbjct: 567 VHVVRTHKGADDKAYRCVFEEEDREGKVGISLQKDLMAIAGEALKSNITTMGPLVLPASE 746
Query: 394 QLLFFATLVWRHLFGGKSDGNSSPSMKKPYIPNYKLAFEHFCVHAASKPILDELQRNLEL 453
QLLF TL+ R +F K KPYIP++K AFEHFC+HA + ++DELQ+NL+L
Sbjct: 747 QLLFLLTLIGRKIFNPK---------WKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQL 899
Query: 454 SEKNMEASRMTLHRFGNTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLS 513
S +++EASRMTLHRFGNTSSSS+WYEL Y+E+K R+++GDRVWQ+AFGSGFKCNS VW
Sbjct: 900 STEHVEASRMTLHRFGNTSSSSLWYELNYIESKGRMKKGDRVWQIAFGSGFKCNSAVWKC 1079
Query: 514 MKRVNKPSRNNPWLDCINRYPVSL 537
+ + P + PW DCI+RYPV +
Sbjct: 1080NRSIKTPV-DGPWADCIDRYPVDI 1148
>TC230600 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (60%)
Length = 1007
Score = 442 bits (1136), Expect = e-124
Identities = 208/323 (64%), Positives = 261/323 (80%)
Frame = +3
Query: 216 IRPKDIGILVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIGVDLARDIL 275
+ PKDIGILVVNC++FNPTPSLS+MI+N YK+RGN S+NLGGMGCSAG+I +DLA+D+L
Sbjct: 3 VNPKDIGILVVNCNLFNPTPSLSSMIVNKYKLRGNAKSFNLGGMGCSAGVIAIDLAKDML 182
Query: 276 QSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRFDYNRAKYRLEH 335
Q +PN YAVVVST+ + NWY G ++MLIPNC FR+G +A+LLSN+ D RAKY+L H
Sbjct: 183 QVHPNTYAVVVSTKNITQNWYFGNNKAMLIPNCLFRVGGAAILLSNKSSDRARAKYKLVH 362
Query: 336 IVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQL 395
+VRTHKGADD++FRCVYQE+D+ G+ +SKDL+ I G AL TNITTLGPLVLP SEQ
Sbjct: 363 VVRTHKGADDKAFRCVYQEQDEVGKTGVSLSKDLMAIAGGALMTNITTLGPLVLPISEQF 542
Query: 396 LFFATLVWRHLFGGKSDGNSSPSMKKPYIPNYKLAFEHFCVHAASKPILDELQRNLELSE 455
LFF TLV + LF K KPYIP++KLAF+HFC+HA + ++DEL++NL+L
Sbjct: 543 LFFLTLVVKKLFNAK---------MKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLRP 695
Query: 456 KNMEASRMTLHRFGNTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMK 515
+++EASRMTLHRFGNTSSSSIWYELAY EAK R+R+G RVWQ+AFGSGFKCNS VW +++
Sbjct: 696 EHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRIRKGHRVWQIAFGSGFKCNSAVWEALR 875
Query: 516 RVNKPSRNNPWLDCINRYPVSLN 538
VN PS N PW +CI+RYPV ++
Sbjct: 876 HVN-PSPNTPWENCIHRYPVHIH 941
>TC222174 similar to UP|Q84VI8 (Q84VI8) Beta-ketoacyl-CoA-synthase, partial
(43%)
Length = 701
Score = 305 bits (780), Expect = 4e-83
Identities = 152/236 (64%), Positives = 183/236 (77%)
Frame = +1
Query: 191 TMKEGRAEASTVMFGALDELFEKTGIRPKDIGILVVNCSIFNPTPSLSAMIINHYKMRGN 250
+MKE R EA VMFGA+DELF KT ++PKDIGIL+VNCS+F PTPSLSAMIINHYK+RGN
Sbjct: 19 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFCPTPSLSAMIINHYKLRGN 198
Query: 251 ILSYNLGGMGCSAGIIGVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFF 310
I S NLGGMGCSAG+I +DLA+D+LQ +PN+YA+VVSTE + NWY G +RS L+ NC F
Sbjct: 199 IKSLNLGGMGCSAGLISIDLAKDLLQVHPNSYALVVSTENITLNWYSGNDRSKLVSNCLF 378
Query: 311 RMGCSALLLSNRRFDYNRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLI 370
RMG +A+LLSN+ D R+KY+L VRT+KG+DD+ F CV QEED G+ +SKDL+
Sbjct: 379 RMGGAAILLSNKGSDRRRSKYQLVDTVRTNKGSDDKCFGCVVQEEDSNGKIGVTLSKDLM 558
Query: 371 EIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGGKSDGNSSPSMKKPYIPN 426
+ GDALKTNITTLGPLVLP SEQLLFFATLV + LF K KPYIP+
Sbjct: 559 AVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKI---------KPYIPD 699
>TC218954 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-like protein,
partial (36%)
Length = 647
Score = 241 bits (614), Expect = 8e-64
Identities = 115/188 (61%), Positives = 144/188 (76%)
Frame = +2
Query: 350 CVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGG 409
CV QEED G+ +SKDL + GDALKTNITTLGPLVLP SEQLLFFATLV + +F
Sbjct: 11 CVTQEEDXNXKVGVALSKDLXXVXGDALKTNITTLGPLVLPTSEQLLFFATLVAKKIFKM 190
Query: 410 KSDGNSSPSMKKPYIPNYKLAFEHFCVHAASKPILDELQRNLELSEKNMEASRMTLHRFG 469
K KPYIP++KLAFEHFC+HA + +LDEL++NL+LS +ME SRMTL+RFG
Sbjct: 191 KI---------KPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSPWHMEPSRMTLYRFG 343
Query: 470 NTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMKRVNKPSRNNPWLDC 529
NTSSSS+WYELAY EAK R++RGDR WQ+AFGSGFKCNS VW +++ +N +PW+D
Sbjct: 344 NTSSSSLWYELAYTEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTINPSKEKSPWIDE 523
Query: 530 INRYPVSL 537
I+++PV +
Sbjct: 524 IDQFPVDV 547
>TC218953 similar to UP|Q84UX3 (Q84UX3) Fatty acid elongase (Fragment),
partial (73%)
Length = 973
Score = 237 bits (605), Expect = 9e-63
Identities = 114/194 (58%), Positives = 144/194 (73%)
Frame = +1
Query: 344 DDRSFRCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVW 403
D CV Q ED G+ +SKDL + GDALKTNITTLGPLVLP SEQLLFFATLV
Sbjct: 1 DXXCXXCVTQXEDANGKVGVTLSKDLXXVXGDALKTNITTLGPLVLPTSEQLLFFATLVG 180
Query: 404 RHLFGGKSDGNSSPSMKKPYIPNYKLAFEHFCVHAASKPILDELQRNLELSEKNMEASRM 463
+ +F K KPYIP++KLAFEHFC+HA + +LDEL++NL+LS +ME SRM
Sbjct: 181 KKIFKMKI---------KPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSPWHMEPSRM 333
Query: 464 TLHRFGNTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMKRVNKPSRN 523
TL+RFGNTSSSS+WYELAY EAK R+++GDR WQ+AFGSGFKCNS VW +++ +N
Sbjct: 334 TLYRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTINPAKEK 513
Query: 524 NPWLDCINRYPVSL 537
+PW+D I+++PV +
Sbjct: 514 SPWIDEIDQFPVDV 555
>BM188086 similar to GP|18447765|gb fiddlehead-like protein {Gossypium
hirsutum}, partial (25%)
Length = 406
Score = 236 bits (603), Expect = 1e-62
Identities = 115/134 (85%), Positives = 126/134 (93%)
Frame = +3
Query: 119 SKPRPIYLIDFACYRPEDELKVSREQYIELASKSGKFDEESLAFQKRILMSSGIGDETYI 178
S+PRPIYLIDFACY+P+DELKVSREQ +E+A KSGKFDE SL FQKR+LMSSGIGDETYI
Sbjct: 3 SRPRPIYLIDFACYKPDDELKVSREQLMEVARKSGKFDEASLEFQKRMLMSSGIGDETYI 182
Query: 179 PKAVVSSTTNTATMKEGRAEASTVMFGALDELFEKTGIRPKDIGILVVNCSIFNPTPSLS 238
PKAVV+ST NTATMKEGR EAS VMFGALDELFEK+ +RPKD+G+LVVNCSIFNPTPSLS
Sbjct: 183 PKAVVASTENTATMKEGRGEASMVMFGALDELFEKSRVRPKDVGVLVVNCSIFNPTPSLS 362
Query: 239 AMIINHYKMRGNIL 252
AMIINHYKMRGNIL
Sbjct: 363 AMIINHYKMRGNIL 404
>TC211403 similar to PIR|F86141|F86141 protein T25K16.11 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(29%)
Length = 644
Score = 230 bits (586), Expect = 1e-60
Identities = 113/187 (60%), Positives = 141/187 (74%), Gaps = 2/187 (1%)
Frame = +1
Query: 350 CVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGG 409
CVYQ+ED G+ ++++L+ + G+ALKTNITTLGPLVLP+SEQ++F +LV R +
Sbjct: 4 CVYQKEDQSGKIGVCLARELMAVAGEALKTNITTLGPLVLPYSEQVMFLVSLVRRKVL-- 177
Query: 410 KSDGNSSPSMKKPYIPNYKLAFEHFCVHAASKPILDELQRNLELSEKNMEASRMTLHRFG 469
S KPYIP++KLA EHFC+HA + +LDELQ+NLELSE +ME SRMTLHRFG
Sbjct: 178 ------KMSGVKPYIPDFKLALEHFCIHAGGRAVLDELQKNLELSEWHMEPSRMTLHRFG 339
Query: 470 NTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMKRVN--KPSRNNPWL 527
NTSSSS+WYELAY EAK RV +GDRVWQ+AFGSGFKCNS VW +++ + K R NPW
Sbjct: 340 NTSSSSLWYELAYTEAKGRVSKGDRVWQIAFGSGFKCNSAVWKAVRDMPFLKDWRGNPWD 519
Query: 528 DCINRYP 534
D IN YP
Sbjct: 520 DSINNYP 540
>CA801688
Length = 447
Score = 187 bits (476), Expect = 8e-48
Identities = 88/158 (55%), Positives = 123/158 (77%)
Frame = +1
Query: 304 LIPNCFFRMGCSALLLSNRRFDYNRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGL 363
L+PNC FRMG +A+LLSNR+ + RAKYRL H+VRTHKG+++++FRCV++EED + G+
Sbjct: 1 LLPNCLFRMGGAAILLSNRKQERKRAKYRLVHVVRTHKGSNEKAFRCVFEEEDKEGKVGI 180
Query: 364 KISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGGKSDGNSSPSMKKPY 423
+SKDL+ I G+ALK+NIT++GPLVLP SEQLLF TL+ R +F + KPY
Sbjct: 181 SLSKDLMAIAGEALKSNITSMGPLVLPASEQLLFLLTLIGRKIFNPR---------WKPY 333
Query: 424 IPNYKLAFEHFCVHAASKPILDELQRNLELSEKNMEAS 461
IP++K AFEHFC+HA + ++DELQ+NL+LS +++EAS
Sbjct: 334 IPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEAS 447
>TC233352 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthase
(AT5g43760/MQD19_11), partial (26%)
Length = 417
Score = 186 bits (472), Expect = 2e-47
Identities = 90/139 (64%), Positives = 112/139 (79%)
Frame = +1
Query: 269 DLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRFDYNR 328
DLA+ +LQ +PN+YA+VVS E + NWY G RSML+ NC FRMG +A+LLSN+ D R
Sbjct: 1 DLAKQLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAVLLSNKSSDRRR 180
Query: 329 AKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLV 388
AKY+L H VRTHKGADD+S+ CV+QEED++K G+ +SKDL+ + G+ALKTNITTLGPLV
Sbjct: 181 AKYQLIHTVRTHKGADDKSYGCVFQEEDEKKTIGVALSKDLMAVAGEALKTNITTLGPLV 360
Query: 389 LPFSEQLLFFATLVWRHLF 407
LP SEQLLFFATLV R +F
Sbjct: 361 LPMSEQLLFFATLVARKVF 417
>TC226524 similar to UP|Q8VYJ5 (Q8VYJ5) At1g68530/T26J14_10, partial (39%)
Length = 608
Score = 174 bits (441), Expect = 9e-44
Identities = 92/199 (46%), Positives = 128/199 (64%)
Frame = +3
Query: 39 LPDFLQSVNLKYVKLGYHYLINHGIYLFTIPLLLVVFSAEVGSLSKEDLWKKLWEDASYD 98
LPDF SV LKYVKLGY YL+NH + L IP+++ +F E+ L E++ LW D
Sbjct: 21 LPDFSNSVKLKYVKLGYQYLVNHILTLTLIPMMIAIFM-EILRLGPEEILN-LWHSLHLD 194
Query: 99 LASVLASFAVFVFTLSVYFMSKPRPIYLIDFACYRPEDELKVSREQYIELASKSGKFDEE 158
L +L S + +F +VYFMSKPR IYL+D+AC++P +V ++E + K + +
Sbjct: 195 LVQILCSAFLIIFIATVYFMSKPRTIYLVDYACFKPPVTCRVPFATFMEHSRLILKDNPK 374
Query: 159 SLAFQKRILMSSGIGDETYIPKAVVSSTTNTATMKEGRAEASTVMFGALDELFEKTGIRP 218
S+ FQ RIL SG+G+ET +P A + TM+ R EA V+F A+D LF KTG++P
Sbjct: 375 SVEFQMRILERSGLGEETCLPPA-IHYIPPKPTMEAARGEAELVIFSAMDSLFTKTGLKP 551
Query: 219 KDIGILVVNCSIFNPTPSL 237
KDI IL+VNCS+F+ TPSL
Sbjct: 552 KDIDILIVNCSLFSSTPSL 608
>TC218955 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-like protein,
partial (26%)
Length = 401
Score = 169 bits (429), Expect = 2e-42
Identities = 78/131 (59%), Positives = 101/131 (76%)
Frame = +3
Query: 242 INHYKMRGNILSYNLGGMGCSAGIIGVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKER 301
+NHYK+RGNI SYNLGGMGCSAG+I +DLA+D+LQ+NPN+YA+V+S E + NWY G +R
Sbjct: 6 VNHYKLRGNIKSYNLGGMGCSAGLISIDLAKDLLQANPNSYALVISMENITLNWYFGNDR 185
Query: 302 SMLIPNCFFRMGCSALLLSNRRFDYNRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFK 361
S L+ NC RMG +A+LLSN+ D R+KYRL VRTHKGAD++ F CV QEED
Sbjct: 186 SKLVSNCLVRMGGAAVLLSNKSSDRRRSKYRLVTTVRTHKGADEKCFSCVTQEEDANGKV 365
Query: 362 GLKISKDLIEI 372
G+ +SKDL+ +
Sbjct: 366 GVTLSKDLMAV 398
>AW508265
Length = 440
Score = 141 bits (356), Expect = 6e-34
Identities = 65/145 (44%), Positives = 105/145 (71%)
Frame = +1
Query: 44 QSVNLKYVKLGYHYLINHGIYLFTIPLLLVVFSAEVGSLSKEDLWKKLWEDASYDLASVL 103
+SV LKYVKLGYHYLI HG+YL PL++++ +A++ + S DL+ LWE Y+L SV+
Sbjct: 4 KSVKLKYVKLGYHYLITHGMYLCLSPLVVLI-AAQLSTFSLRDLYD-LWEHLQYNLISVI 177
Query: 104 ASFAVFVFTLSVYFMSKPRPIYLIDFACYRPEDELKVSREQYIELASKSGKFDEESLAFQ 163
+ VF ++YF+++PRP+YL++F+CY+PE+ K +++ +IE + + F EE+L FQ
Sbjct: 178 LCLTLLVFLSTLYFLTRPRPVYLVNFSCYKPEESRKCTKKIFIEQSRLTSSFTEENLEFQ 357
Query: 164 KRILMSSGIGDETYIPKAVVSSTTN 188
++IL SG+G+ TY+P+AV++ N
Sbjct: 358 RKILERSGLGENTYLPEAVLNIPPN 432
>TC206110 similar to UP|Q84K36 (Q84K36) Fiddlehead-like protein, partial
(12%)
Length = 479
Score = 135 bits (339), Expect = 6e-32
Identities = 63/71 (88%), Positives = 65/71 (90%)
Frame = +2
Query: 468 FGNTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMKRVNKPSRNNPWL 527
FGNTSSSSIWYELAYMEAKE VRRGDRVWQLAFGSGFKCNSVVW +M+RV KPSR NPWL
Sbjct: 8 FGNTSSSSIWYELAYMEAKESVRRGDRVWQLAFGSGFKCNSVVWRAMRRVTKPSR-NPWL 184
Query: 528 DCINRYPVSLN 538
DCINRYP LN
Sbjct: 185 DCINRYPAPLN 217
>TC234478 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty acid condensing
enzyme CUT1, partial (18%)
Length = 307
Score = 122 bits (307), Expect = 3e-28
Identities = 54/82 (65%), Positives = 68/82 (82%)
Frame = +3
Query: 456 KNMEASRMTLHRFGNTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMK 515
+++EASRMTLHRFGNTSSSS+WYEL Y+E+K R++RGDRVWQ+AFGSGFKCNS VW +
Sbjct: 12 EHVEASRMTLHRFGNTSSSSLWYELNYIESKGRMKRGDRVWQIAFGSGFKCNSAVWRCNR 191
Query: 516 RVNKPSRNNPWLDCINRYPVSL 537
+ P + PW DCI+RYPV +
Sbjct: 192 SIQTPF-DGPWADCIDRYPVHI 254
>BE023807
Length = 412
Score = 115 bits (287), Expect = 6e-26
Identities = 60/137 (43%), Positives = 94/137 (67%)
Frame = +1
Query: 60 NHGIYLFTIPLLLVVFSAEVGSLSKEDLWKKLWEDASYDLASVLASFAVFVFTLSVYFMS 119
++ +YL IPLL V SA + ++S +D+ +LWE+ ++L SV ++ VF ++ YFMS
Sbjct: 7 SNAMYLLLIPLLGVA-SAYLSTISYQDV-VQLWENLKFNLLSVTLCSSLIVFLVTFYFMS 180
Query: 120 KPRPIYLIDFACYRPEDELKVSREQYIELASKSGKFDEESLAFQKRILMSSGIGDETYIP 179
+PR +YL+DFACY+PE E +RE ++ + ++G F EE+LAFQK+IL SG+G +TY+P
Sbjct: 181 RPRGVYLVDFACYKPEPECTCTREIFMNRSVETGVFSEENLAFQKKILERSGLGQKTYLP 360
Query: 180 KAVVSSTTNTATMKEGR 196
A++S +N M E R
Sbjct: 361 PAILSVPSNPC-MAEAR 408
>TC226521 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty acid condensing
enzyme CUT1, partial (12%)
Length = 601
Score = 75.1 bits (183), Expect = 7e-14
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +3
Query: 483 MEAKERVRRGDRVWQLAFGSGFKCNSVVWLSMKRVNKPSRNNPWLDCINRYPVSL 537
+E+K R+++GDRVWQ+AFGSGFKCNS VW + + P + PW DCI+RYPV +
Sbjct: 3 IESKGRMKKGDRVWQIAFGSGFKCNSAVWKCNRSIKTPV-DGPWADCIDRYPVHI 164
>CD412949 similar to PIR|T48449|T484 fatty acid elongase-like protein -
Arabidopsis thaliana, partial (12%)
Length = 396
Score = 72.4 bits (176), Expect = 5e-13
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = -3
Query: 449 RNLELSEKNMEASRMTLHRFGNTSSSSIWYELAYMEAKERVRRGDRVWQLAFGSGFKCNS 508
+ L L+E ++E +RM LH +GNTS+ +WY L YMEA++R+++GDR+ ++ G+GF
Sbjct: 382 KGLRLNEYDLEPARMALHPWGNTSAGGLWYVLGYMEAQKRLKKGDRILMISLGAGFSAP- 206
Query: 509 VVWLSMKRVNKPSRNNPWLDCINRYP 534
L + + S N W D I YP
Sbjct: 205 ---LCLGVMRDLSDTNVWKDFIESYP 137
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,193,164
Number of Sequences: 63676
Number of extensions: 375692
Number of successful extensions: 1784
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of query: 538
length of database: 12,639,632
effective HSP length: 102
effective length of query: 436
effective length of database: 6,144,680
effective search space: 2679080480
effective search space used: 2679080480
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0133.9