BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0109.3
(297 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC228247 weakly similar to UP|Q8LBR0 (Q8LBR0) Phloem-specific le... 362 e-100
TC205690 weakly similar to UP|Q6K3E9 (Q6K3E9) F-box family prote... 223 8e-59
TC232233 weakly similar to GB|AAT41865.1|48310676|BT014882 At1g8... 198 3e-51
TC206024 weakly similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific le... 180 6e-46
TC230781 weakly similar to UP|Q6K3E9 (Q6K3E9) F-box family prote... 177 7e-45
TC217152 similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lectin-li... 149 1e-36
TC228248 weakly similar to UP|Q8LBR0 (Q8LBR0) Phloem-specific le... 136 1e-32
TC217153 similar to GB|AAS76702.1|45773796|BT012215 At1g56240 {A... 108 4e-24
BI426662 104 4e-23
TC228790 103 7e-23
TC207017 103 1e-22
TC217151 similar to UP|Q6NPT8 (Q6NPT8) At2g02230, partial (6%) 102 2e-22
TC207581 101 4e-22
TC207016 94 1e-19
AI440677 80 1e-15
BG839963 weakly similar to GP|21592660|gb| phloem-specific lecti... 64 7e-14
TC221119 similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lectin-li... 44 4e-12
BQ610780 66 2e-11
TC228791 65 3e-11
AW458609 65 5e-11
>TC228247 weakly similar to UP|Q8LBR0 (Q8LBR0) Phloem-specific lectin
PP2-like protein, partial (46%)
Length = 1124
Score = 362 bits (929), Expect = e-100
Identities = 185/290 (63%), Positives = 218/290 (74%), Gaps = 3/290 (1%)
Frame = +3
Query: 1 MISLPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPS 60
M +LPEDCVS+ILS+TSPPDACRFS+VSSTLRS+ADSD++WR+F PSDY DIVSRA+NP
Sbjct: 72 MDTLPEDCVSKILSYTSPPDACRFSMVSSTLRSSADSDLLWRTFFPSDYSDIVSRALNPL 251
Query: 61 ALQFSS-YKQLFHALCSPLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWR 119
+L SS YK LF+ALC PLLLDGGN SFKLDK SGKKSYILSAR LSITWS+DP++WSWR
Sbjct: 252 SLNSSSSYKHLFYALCHPLLLDGGNMSFKLDKSSGKKSYILSARQLSITWSNDPLYWSWR 431
Query: 120 SNPESRFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAYLIMKVSHRGYGLDSAPAEVSV 179
PESRF+EVAELRTV+WLEI+GKI T +LTPNTSY YLIMK SHR YGLDS EVS+
Sbjct: 432 PVPESRFKEVAELRTVSWLEIQGKIGTRILTPNTSYVVYLIMKTSHREYGLDSVACEVSI 611
Query: 180 AVGGRVLRRGKAYLGQ--KDEKKVEMETLFYGNRRDIFRNRVIQLEQLEEEGKDGGVIPV 237
AV +V + G+ YL Q KDE ++ E+ I +
Sbjct: 612 AVDNKVKQSGRVYLCQNEKDENNLKKES-----------------------------IGI 704
Query: 238 PGKRDDGWMEIELGEFFSGGGDVEIKMGLREVGYQLKGGLVVEGIEVRPK 287
P +R+DGWMEIE+GEFF G D E+ M L EVGYQLKGGL+VEG+E+RPK
Sbjct: 705 PMRREDGWMEIEMGEFFCGEADEEVLMSLMEVGYQLKGGLIVEGVEIRPK 854
>TC205690 weakly similar to UP|Q6K3E9 (Q6K3E9) F-box family protein-like,
partial (33%)
Length = 1360
Score = 223 bits (568), Expect = 8e-59
Identities = 129/287 (44%), Positives = 173/287 (59%), Gaps = 2/287 (0%)
Frame = +2
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
LPE C++ ILS T+P D CRFS+VS RSAA+SD VW+ FLPSDY I+S++ PS L
Sbjct: 215 LPEGCIASILSRTTPADVCRFSVVSKIFRSAAESDAVWKRFLPSDYHSIISQS--PSPLN 388
Query: 64 FSSYKQLFHALCS-PLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNP 122
+ S K+L+ AL P+++D G KSF+L+K SGKK Y+L+AR LSI W +W+W ++
Sbjct: 389 YPSKKELYLALSDRPIIIDQGKKSFQLEKKSGKKCYMLAARALSIIWGDTEQYWNWTTDT 568
Query: 123 ESRFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAYLIMKVSHRGYGLDSAPAEVSVAVG 182
SRF EVAELR V WLEI G + T VL+PNT Y AYL+ K+ G + P E+SV V
Sbjct: 569 NSRFPEVAELRDVCWLEIRGVLNTLVLSPNTQYAAYLVFKMID-ARGFHNRPVELSVNVF 745
Query: 183 GRVLRRGKAYLGQKDEKKVEMETLFYGNRRDIFRNRVIQLEQLEEEGKDGGVIPVPGKRD 242
G G K V ++ ++ RV L++ P R
Sbjct: 746 G----------GHGSTKIVCLDP-----NEELPHRRVEGLQR-------------PNARS 841
Query: 243 DGWMEIELGEFFSGGGDVEIKMGLREV-GYQLKGGLVVEGIEVRPKQ 288
DGW+EIE+GEFF+ G D E++M + E G K GL +EGIEV+PK+
Sbjct: 842 DGWLEIEMGEFFNTGLDDEVQMSVVETKGGNWKSGLFIEGIEVKPKE 982
>TC232233 weakly similar to GB|AAT41865.1|48310676|BT014882 At1g80110
{Arabidopsis thaliana;} , partial (47%)
Length = 687
Score = 198 bits (503), Expect = 3e-51
Identities = 103/204 (50%), Positives = 135/204 (65%), Gaps = 2/204 (0%)
Frame = +1
Query: 3 SLPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSAL 62
+LPE C++ ILS TSP D CR SL+SST RSAA SD VW FLPSD+ I+S++ S+L
Sbjct: 22 NLPEGCIANILSFTSPRDVCRLSLLSSTFRSAAQSDAVWNKFLPSDFHTILSQS---SSL 192
Query: 63 QFSSYKQLFHALCS-PLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSN 121
S K LF LC PLL+D G KS++LDK+ GKK Y+LSAR+L I W P +W W S
Sbjct: 193 SLPSKKDLFLYLCQKPLLIDDGKKSYQLDKVYGKKCYMLSARNLFIVWGDTPRYWRWTSL 372
Query: 122 PESRFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAYLIMKVSHRG-YGLDSAPAEVSVA 180
P++RF EVAELR+V WLEI G I TG+L+P T YGAYL+ K + G YG D EVS+
Sbjct: 373 PDARFSEVAELRSVCWLEIRGWINTGMLSPETLYGAYLVFKPNPSGFYGFDYQLVEVSIG 552
Query: 181 VGGRVLRRGKAYLGQKDEKKVEME 204
+ G R+ +L + +++ +
Sbjct: 553 IAGGENRKRNVFLDAERGRRLRYQ 624
>TC206024 weakly similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lectin-like
protein, partial (47%)
Length = 954
Score = 180 bits (457), Expect = 6e-46
Identities = 113/287 (39%), Positives = 157/287 (54%), Gaps = 3/287 (1%)
Frame = +3
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
LPE C+++ILS+T+P D CR SLVS RSAA+SD VW FL SD+ I+ +
Sbjct: 36 LPEGCIAKILSYTTPVDVCRLSLVSKAFRSAAESDTVWDCFLLSDFTSIIP-------IS 194
Query: 64 FSSYKQLFHALCS-PLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNP 122
+S K L+ L P ++ G KS +LDK +GKK +LSAR+L+I W W W S P
Sbjct: 195 STSKKDLYFTLSDHPTIIHQGRKSVQLDKRTGKKCCMLSARNLTIIWGDTVQHWEWTSLP 374
Query: 123 ESRFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAYLIMKVSHRGYGLDSAPAEVSVAVG 182
ESRF+EVA L+ V W +I G I T L+ NT Y +L+ K+ + G P +SV V
Sbjct: 375 ESRFQEVAMLQAVCWFDISGSINTLTLSSNTHYATFLVFKMINAS-GFHYHPTVLSVGVL 551
Query: 183 GRVLRRGKAYLGQKDEKKVEMETLFYGNRRDIFRNRVIQLEQLEEEGKDGGVIPVPGKRD 242
G G + K V ++ GN R L++L+ P R
Sbjct: 552 G----------GNSNTKYVCLDPNLKGNHR---------LQELQ----------FPKVRS 644
Query: 243 DGWMEIELGEFF-SGGGDVEIKMGLREVGYQL-KGGLVVEGIEVRPK 287
DGW+EIE+GEFF SG + +++M + E + K G ++EGIE+RPK
Sbjct: 645 DGWLEIEMGEFFNSGQEEKQVQMKVMETTSHIWKCGFILEGIEIRPK 785
>TC230781 weakly similar to UP|Q6K3E9 (Q6K3E9) F-box family protein-like,
partial (29%)
Length = 971
Score = 177 bits (448), Expect = 7e-45
Identities = 112/276 (40%), Positives = 151/276 (54%), Gaps = 4/276 (1%)
Frame = +2
Query: 16 TSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQFSSYKQLFHALC 75
T+ D CR SLVS SAA+++ VW FLPSD I+S + S F S K L+ L
Sbjct: 2 TTRADVCRLSLVSKAFHSAAEANTVWDCFLPSDLSSIISPS--SSVPPFRSIKDLYLYLS 175
Query: 76 S-PLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNPESRFREVAELRT 134
P ++D G KSF+L+K +G K Y+LSARDLSI W +W W + PESRF EVA LR
Sbjct: 176 DRPTIIDQGIKSFQLEKRTGNKCYMLSARDLSIIWGDTTHYWEWTTLPESRFEEVARLRA 355
Query: 135 VNWLEIEGKIRTGVLTPNTSYGAYLIMKVSHRGYGLDSAPAEVSVAVGGRVLRRGKAYLG 194
V W +I G++ T VL+PNT+Y A+L+ K+ G G PA +SV + G G
Sbjct: 356 VCWFDITGRMNTRVLSPNTNYAAFLVFKMIDAG-GFHYDPAVLSVGILG----------G 502
Query: 195 QKDEKKVEMETLFYGNRRDIFRNRVIQLEQLEEEGKDGGVIPVPGKRDDGWMEIELGEFF 254
K V ++ NR D +R L++ P R DGW+EIE+GEFF
Sbjct: 503 NSSTKNVCLDPNLVDNRLD---DRFHGLQR-------------PTVRSDGWLEIEMGEFF 634
Query: 255 SGG---GDVEIKMGLREVGYQLKGGLVVEGIEVRPK 287
+ G +++IK+ K G ++EGIEVRPK
Sbjct: 635 NPGLEEDELQIKVS-ETTSNWWKRGFILEGIEVRPK 739
>TC217152 similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lectin-like protein,
partial (8%)
Length = 909
Score = 149 bits (377), Expect = 1e-36
Identities = 98/261 (37%), Positives = 138/261 (52%), Gaps = 7/261 (2%)
Frame = +3
Query: 40 VWRSFLPSDYEDIVSRAVNPSALQFSSYKQLFHALCS-PLLLDGGNKSFKLDKLSGKKSY 98
VW F+PSD+ +S + + S K L+ L P ++D G KSF+L+K + KK Y
Sbjct: 3 VWDRFIPSDFSSTISPLSSSN-----SKKDLYFTLSDRPTIIDQGRKSFQLEKRTAKKCY 167
Query: 99 ILSARDLSITWSSDP----MFWSWRSNPESRFREVAELRTVNWLEIEGKIRTGVLTPNTS 154
+LSARD+SITW+ +W W+S PESRF+EVA L V W I G+I+T VL+PNT
Sbjct: 168 MLSARDISITWAPTQGEASQYWEWKSLPESRFQEVARLYAVCWFNITGQIKTRVLSPNTQ 347
Query: 155 YGAYLIMKVSHRGYGLDSAPAEVSVA-VGGRVLRRGKAYLGQKDEKKVEMETLFYGNRRD 213
Y A+L+ ++ G PA +SV+ VGG R K + + +++ F G +R
Sbjct: 348 YAAFLVFQMIDAS-GFHHHPAMLSVSNVGGS--RTSKYVCLDPNLEDNDLDDRFRGLQR- 515
Query: 214 IFRNRVIQLEQLEEEGKDGGVIPVPGKRDDGWMEIELGEFFSGG-GDVEIKMGLREVGYQ 272
P R D W+EIE+GEFF+ G + EI M +RE
Sbjct: 516 ------------------------PNVRKDKWLEIEMGEFFNSGLEEDEIYMNVRETSDM 623
Query: 273 LKGGLVVEGIEVRPKQTQSTQ 293
K G ++EGIEVRPK S +
Sbjct: 624 WKHGFILEGIEVRPKHV*SVK 686
>TC228248 weakly similar to UP|Q8LBR0 (Q8LBR0) Phloem-specific lectin
PP2-like protein, partial (28%)
Length = 519
Score = 136 bits (342), Expect = 1e-32
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +3
Query: 90 DKLSGKKSYILSARDLSITWSSDPMFWSWRSNPESRFREVAELRTVNWLEIEGKIRTGVL 149
DK SGKKSYILSAR LSITWS+DP++WSWR PESRF+EVAELRTV+WLEI+GKI T +L
Sbjct: 15 DKSSGKKSYILSARQLSITWSNDPLYWSWRPVPESRFKEVAELRTVSWLEIQGKIGTRIL 194
Query: 150 TPNTSYGAYLIMKVSHRGYGL 170
TPNTSY YLIMK SHR YGL
Sbjct: 195 TPNTSYVVYLIMKTSHREYGL 257
>TC217153 similar to GB|AAS76702.1|45773796|BT012215 At1g56240 {Arabidopsis
thaliana;} , partial (13%)
Length = 635
Score = 108 bits (269), Expect = 4e-24
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Frame = +3
Query: 44 FLPSDYEDIVSRAVNPSALQFSSYKQLFHALCS-PLLLDGGNKSFKLDKLSGKKSYILSA 102
F+PSD+ +S + + S K L+ L P ++D G KSF+L+K + KK Y+LSA
Sbjct: 3 FIPSDFSSTISPLSSSN-----SKKDLYFTLSDRPTIIDQGRKSFQLEKRTAKKCYMLSA 167
Query: 103 RDLSITWSSDP----MFWSWRSNPESRFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAY 158
RD+SITW+ +W W+S PESRF+EVA L V W I G+I+T VL+PNT Y A+
Sbjct: 168 RDISITWAPTQGEASQYWEWKSLPESRFQEVARLYAVCWFNITGQIKTRVLSPNTQYAAF 347
Query: 159 LIMKVSHRGYGLDSAPAEVSVA 180
L+ ++ G PA +S++
Sbjct: 348 LVFQMIDAS-GFHHHPAMLSIS 410
Score = 54.7 bits (130), Expect = 5e-08
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 238 PGKRDDGWMEIELGEFFSGG-GDVEIKMGLREVGYQLKGGLVVEGIEVRPKQTQSTQ 293
P R D W+EIE+GEFF+ G + EI M +RE K G ++EGIEVRPK S +
Sbjct: 424 PNVRKDKWLEIEMGEFFNSGLEEDEIYMNVRETSDMWKHGFILEGIEVRPKHV*SVK 594
>BI426662
Length = 421
Score = 104 bits (260), Expect = 4e-23
Identities = 62/133 (46%), Positives = 79/133 (58%), Gaps = 29/133 (21%)
Frame = +3
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSAL- 62
LPE C++ I+S T+PPDAC SLVSS+ RSA+ +D VW FLPSDY+ I+S++ PS L
Sbjct: 21 LPEGCIANIVSFTTPPDACVLSLVSSSFRSASVTDFVWERFLPSDYQAIISQSSKPSTLT 200
Query: 63 QFSSYKQLFHALC-SPLLLDGGNK---------------------------SFKLDKLSG 94
+SS K L+ LC +PLL+D G K SF LDKL+G
Sbjct: 201 NYSSKKDLYLHLCHNPLLIDAGKKVLQIKSFFLSIIIHVYLSLIGKLINHQSFALDKLNG 380
Query: 95 KKSYILSARDLSI 107
K Y+LSAR LSI
Sbjct: 381 KICYMLSARSLSI 419
>TC228790
Length = 1215
Score = 103 bits (258), Expect = 7e-23
Identities = 51/142 (35%), Positives = 80/142 (55%), Gaps = 1/142 (0%)
Frame = +2
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
+PE CV+ + H +PP+ C + ++ R AA SD VW + LP +Y+D++ P
Sbjct: 185 IPESCVACVFLHLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPPERHH 364
Query: 64 FS-SYKQLFHALCSPLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNP 122
S S K +F L PL D G+K LD+++GK +SA+ + IT D +W+W
Sbjct: 365 RSLSKKDIFALLSRPLPFDHGHKEVWLDRVTGKVCMSISAKAMVITGIDDRRYWNWIPTE 544
Query: 123 ESRFREVAELRTVNWLEIEGKI 144
ESRF VA L+ + W E++G++
Sbjct: 545 ESRFHTVAYLQQIWWFEVDGEV 610
>TC207017
Length = 905
Score = 103 bits (256), Expect = 1e-22
Identities = 46/141 (32%), Positives = 79/141 (55%)
Frame = +3
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
+PE C+S + + PPD C+ + V+ A+ +D VW S LP Y+ + ++ + +
Sbjct: 189 IPESCISSLFMNLDPPDICKLARVNRAFHRASSADFVWESKLPPSYKFLANKVLGEENIA 368
Query: 64 FSSYKQLFHALCSPLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNPE 123
+ K+++ LC P DGG K LDK SG+ +S++ L IT D +W++ E
Sbjct: 369 TMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCLFMSSKSLKITGIDDRRYWNYIPTEE 548
Query: 124 SRFREVAELRTVNWLEIEGKI 144
SRF+ VA L+ + W+E+ G++
Sbjct: 549 SRFQSVAYLQQMWWVEVVGEL 611
>TC217151 similar to UP|Q6NPT8 (Q6NPT8) At2g02230, partial (6%)
Length = 514
Score = 102 bits (255), Expect = 2e-22
Identities = 58/128 (45%), Positives = 77/128 (59%), Gaps = 6/128 (4%)
Frame = +3
Query: 4 LPEDCVSEILSHT-SPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSAL 62
LPE CV+ ILS+ +P D R SLVS SAAD D VW F+PSD+ +S + +
Sbjct: 36 LPEGCVAHILSYICTPEDIVRLSLVSKAFYSAADYDTVWDRFIPSDFSSTISPLSSSN-- 209
Query: 63 QFSSYKQLFHALCS-PLLLDGGNKSFKLDKLSGKKSYILSARDLSITWS----SDPMFWS 117
S K L+ L P ++D G KSF+L+K + KK Y+LSARD+SITW+ +W
Sbjct: 210 ---SKKDLYFTLSDRPTIIDQGRKSFQLEKRTAKKCYMLSARDISITWAPTQGEASQYWE 380
Query: 118 WRSNPESR 125
W+S PESR
Sbjct: 381 WKSLPESR 404
>TC207581
Length = 1562
Score = 101 bits (252), Expect = 4e-22
Identities = 49/141 (34%), Positives = 79/141 (55%)
Frame = +2
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
+PE CV+ +L + PPD C+ + ++ R A+ +D +W S LP +Y+ IV +A+ +++
Sbjct: 464 IPESCVALVLMYLDPPDICKLARLNRAFRDASSADFIWESKLPLNYKFIVEKALKDVSVE 643
Query: 64 FSSYKQLFHALCSPLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNPE 123
+ ++ LC P D G K LDK +G +S++ L IT D +WS S E
Sbjct: 644 QLGKRDIYARLCRPNSFDNGTKEIWLDKRTGGVCLAISSQALRITGIDDRRYWSRISTEE 823
Query: 124 SRFREVAELRTVNWLEIEGKI 144
SRF VA L+ + WLE+E +
Sbjct: 824 SRFHTVAYLQQIWWLEVEDDV 886
>TC207016
Length = 1310
Score = 93.6 bits (231), Expect = 1e-19
Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 6/291 (2%)
Frame = +1
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
+PE+C+S ++ + P + C + V+ T A+ ++ VW S LP +Y+ ++++ + L
Sbjct: 316 IPENCISSMMMNFDPQEICSLARVNKTFHRASSANFVWESKLPQNYKFLLNKVLGEQNLG 495
Query: 64 FSSYKQLFHALCSPLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNPE 123
+ K+++ LC P DGG K LD+ SG+ +S++ IT D +W++ E
Sbjct: 496 SMTKKEIYAKLCQPNFFDGGTKEVWLDRSSGQVCMFISSKSFKITGIDDRRYWNYIPTEE 675
Query: 124 S---RFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAYLIMKVSHRGYGLDSAPAEVSVA 180
S RF+ VA L+ + W+E+ G++ P +Y + +++ L +
Sbjct: 676 SR*ERFKSVAYLQQMWWVEVIGELEFEF--PKGNYSVFFKLQLGKPSKRLGRRVCNLD-Q 846
Query: 181 VGGRVLRRGKAYLGQKDEKKVEMETLFYGNRRDIFRNRVIQLEQLEEEGKDGGVIPVPGK 240
V G ++ + L D ++ + G+R
Sbjct: 847 VHGWDIKPVRFQLSTSDGQRSLSQCYLRGSRE---------------------------- 942
Query: 241 RDDGWMEIELGEFF--SGGGDVEIKMGLREVG-YQLKGGLVVEGIEVRPKQ 288
W +G+F G I L ++ KGGL ++G+ + PK+
Sbjct: 943 ----WAYYHVGDFAIDKPNGPTNINFSLAQIDCTHTKGGLCIDGVVICPKE 1083
>AI440677
Length = 421
Score = 80.1 bits (196), Expect = 1e-15
Identities = 37/115 (32%), Positives = 66/115 (57%)
Frame = +1
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
+PE+CV+ + H +PP+ C + ++ R AA +D VW++ LP +Y+D++ + P +
Sbjct: 55 IPENCVARVFLHLTPPEICNLARLNRAFRGAASADSVWQTKLPRNYQDLLD-LMPPERHR 231
Query: 64 FSSYKQLFHALCSPLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSW 118
S K +F L + D GNK LD+++ + +SA+ +SIT D +W+W
Sbjct: 232 NLSKKDIFALLSRAVPFDDGNKGVWLDRVTRRVCMSISAKAMSITGIDDRRYWTW 396
>BG839963 weakly similar to GP|21592660|gb| phloem-specific lectin PP2-like
protein {Arabidopsis thaliana}, partial (11%)
Length = 707
Score = 63.9 bits (154), Expect(2) = 7e-14
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 14/157 (8%)
Frame = +3
Query: 144 IRTGVLTPNTSYGAYLIMKVSHRG-YGLDSAPAEVSVAVGGRVLRRGKAYLGQKDEKKVE 202
I++G L+ T YGAYL+ K G YG + P VSV RR YL + +
Sbjct: 75 IKSGTLSEKTLYGAYLVFKQRSGGAYGFYNQPVXVSVEG-----RRRTVYLEXAETPRRP 239
Query: 203 METLFYGNRRDIF-RNRVIQLEQLEE-------EGKDGGVIPVPGKRDDGWMEIELGEFF 254
E + G IF R R L+ + K GG P +R DGWME+ELG+ F
Sbjct: 240 REQIVPG----IFXRVRSRFLDSFDAAPPPPPPNAKGGG--EYPKERSDGWMEVELGDXF 401
Query: 255 SGGG----DVEIKMGLREV-GYQLKGGLVVEGIEVRP 286
+ GG + E+++G+ EV K G+ V+G E+RP
Sbjct: 402 NVGGXKEKEKEVEIGVYEVXSGGWKXGIFVQGXEIRP 512
Score = 30.4 bits (67), Expect(2) = 7e-14
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 124 SRFREVAELRTVNWLEIEGK 143
SRF EVAEL +V WLEI+G+
Sbjct: 16 SRFSEVAELVSVCWLEIKGE 75
>TC221119 similar to UP|Q9FLU7 (Q9FLU7) Phloem-specific lectin-like protein,
partial (6%)
Length = 971
Score = 44.3 bits (103), Expect(2) = 4e-12
Identities = 16/31 (51%), Positives = 24/31 (76%)
Frame = +3
Query: 89 LDKLSGKKSYILSARDLSITWSSDPMFWSWR 119
++K +GK Y+LSAR LSITW + ++WSW+
Sbjct: 168 IEKTTGKICYLLSARQLSITWGNSTLYWSWK 260
Score = 43.9 bits (102), Expect(2) = 4e-12
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 121 NP-ESRFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAY 158
NP +S F E AELRT+ WLEI+G I + +L+P T GAY
Sbjct: 259 NPSKSSFEEAAELRTICWLEIKGSINS*ILSPKTL*GAY 375
Score = 34.3 bits (77), Expect = 0.069
Identities = 18/42 (42%), Positives = 27/42 (63%)
Frame = +2
Query: 246 MEIELGEFFSGGGDVEIKMGLREVGYQLKGGLVVEGIEVRPK 287
++++ G S G I+M L+E KGGL+V+GIE+RPK
Sbjct: 494 LKMKNGRRLSWGVSTAIQMCLKEA----KGGLIVDGIEIRPK 607
>BQ610780
Length = 447
Score = 65.9 bits (159), Expect = 2e-11
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +3
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
LPE C+++ILS+T+P DACR S VS RSAA+SD VW FL SD+ + PS+
Sbjct: 15 LPEGCIAKILSYTTPVDACRLS-VSIAFRSAAESDTVWDCFLLSDFTSFIP----PSS-- 173
Query: 64 FSSYKQLFHALCS-PLLLDGGNKSFKLDKLSGK 95
+S L+ L P ++D G KS +L K G+
Sbjct: 174-TSKNDLYFTLSDLPTIMDQGRKSVQLAKGPGR 269
Score = 50.8 bits (120), Expect = 7e-07
Identities = 25/56 (44%), Positives = 32/56 (56%)
Frame = +2
Query: 70 LFHALCSPLLLDGGNKSFKLDKLSGKKSYILSARDLSITWSSDPMFWSWRSNPESR 125
LFH+L P G K + K +GKK Y+LSAR+L+I W W W S PES+
Sbjct: 191 LFHSL*PPHHHGSG*KECSIGKRTGKKCYMLSARNLAIIWGDTVRHWEWTSLPESK 358
>TC228791
Length = 584
Score = 65.5 bits (158), Expect = 3e-11
Identities = 36/106 (33%), Positives = 57/106 (52%), Gaps = 6/106 (5%)
Frame = +1
Query: 4 LPEDCVSEILSHTSPPDACRFSLVSSTLRSAADSDMVWRSFLPSDYEDIVSRAVNPSALQ 63
+PE CV+ + H +PP+ C + ++ R AA SD VW + LP +Y+D++ V P +
Sbjct: 268 IPESCVACVFLHLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLD-LVPPERHR 444
Query: 64 FSSYKQLFHALCSPLLLDGGNK------SFKLDKLSGKKSYILSAR 103
S K +F L PL D G+K LD+++GK +SA+
Sbjct: 445 SLSKKDIFALLSRPLPFDHGHKVGAALQEVWLDRVTGKVCMSISAK 582
>AW458609
Length = 371
Score = 64.7 bits (156), Expect = 5e-11
Identities = 34/62 (54%), Positives = 41/62 (65%), Gaps = 1/62 (1%)
Frame = +2
Query: 121 NPESRFREVAELRTVNWLEIEGKIRTGVLTPNTSYGAYLIMKVSHRG-YGLDSAPAEVSV 179
N RF EVAELR+V WLEI G I TG+L+P T YGAYL+ K + G YG D EVS+
Sbjct: 182 NWNCRFSEVAELRSVCWLEIRGWINTGMLSPETLYGAYLVFKPNPSGFYGFDYQLVEVSI 361
Query: 180 AV 181
+
Sbjct: 362 GI 367
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,947,248
Number of Sequences: 63676
Number of extensions: 176913
Number of successful extensions: 1024
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of query: 297
length of database: 12,639,632
effective HSP length: 97
effective length of query: 200
effective length of database: 6,463,060
effective search space: 1292612000
effective search space used: 1292612000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0109.3