
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0105.5
(231 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229463 weakly similar to UP|O81329 (O81329) F3D13.5 protein, p... 305 1e-83
AI442341 199 7e-52
TC215223 121 3e-28
TC225915 117 4e-27
TC225916 weakly similar to GB|AAT41789.1|48310278|BT014806 At3g4... 115 2e-26
TC215224 109 9e-25
TC228734 weakly similar to UP|Q99738 (Q99738) Pinin, partial (4%) 94 7e-20
BE610503 91 4e-19
TC230031 74 6e-18
TC216388 similar to UP|Q8H1B5 (Q8H1B5) Hin1-like protein, partia... 86 2e-17
TC216389 weakly similar to UP|Q9M663 (Q9M663) Harpin inducing pr... 83 9e-17
AW348693 weakly similar to GP|19110824|gb ABC transporter ABCA.5... 73 1e-13
TC214664 weakly similar to GB|AAL31248.1|16974489|AY061921 At2g2... 66 1e-11
TC205403 similar to UP|Q08529 (Q08529) Glycine-rich protein, par... 66 2e-11
TC229268 similar to GB|BAB32889.1|13122296|AB047812 hin1 homolog... 63 1e-10
TC214631 weakly similar to GB|AAL31248.1|16974489|AY061921 At2g2... 62 2e-10
TC208148 similar to UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced prote... 62 3e-10
TC230817 similar to UP|Q6MWW7 (Q6MWW7) PE-PGRS FAMILY PROTEIN (F... 61 4e-10
TC208827 UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced protein B13-1-9,... 61 4e-10
AW706382 60 1e-09
>TC229463 weakly similar to UP|O81329 (O81329) F3D13.5 protein, partial (66%)
Length = 1212
Score = 305 bits (781), Expect = 1e-83
Identities = 142/188 (75%), Positives = 168/188 (88%)
Frame = +3
Query: 44 PKRAACTFITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNV 103
P+RA CT IT+FLL G+TLLVLWLVYRPHKPRFTV+GAA+Y LNT++PPL+S +QF+V
Sbjct: 108 PRRAVCTGITIFLLLAGVTLLVLWLVYRPHKPRFTVIGAAIYGLNTSTPPLMSTTMQFSV 287
Query: 104 LIRNPNKRVSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTVE 163
LI+NPN+RVSIYYDRFSAFVSYRNQ IT QVLLPPL+ EK S VS+SPVIGGTP+PV+VE
Sbjct: 288 LIKNPNRRVSIYYDRFSAFVSYRNQAITPQVLLPPLYQEKRSSVSVSPVIGGTPLPVSVE 467
Query: 164 VANGLAMDESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCDLLVGLKKGFVGQVPLLQ 223
V+NGLAMDE+YGVVGL+L+F GRV+WKAG ++T H+GLYVKCD+L+GLKKG VGQVPLL
Sbjct: 468 VSNGLAMDEAYGVVGLRLIFQGRVRWKAGAIKTAHYGLYVKCDVLMGLKKGLVGQVPLLG 647
Query: 224 AQACDVDL 231
CDVDL
Sbjct: 648 VTPCDVDL 671
>AI442341
Length = 410
Score = 199 bits (507), Expect = 7e-52
Identities = 95/125 (76%), Positives = 111/125 (88%)
Frame = +3
Query: 44 PKRAACTFITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNV 103
P+RA CT IT+FLL G+TLLVLWLVYRPHKPRFTV+GAAVY LNTT+PPL+S +QF+V
Sbjct: 36 PRRAVCTGITIFLLLAGVTLLVLWLVYRPHKPRFTVIGAAVYDLNTTTPPLMSTTVQFSV 215
Query: 104 LIRNPNKRVSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTVE 163
LI+NPN+RVSIYYDRFSAFVSYRNQ IT QVLLPPL EK S VS+SPV+GGT +PV+VE
Sbjct: 216 LIKNPNRRVSIYYDRFSAFVSYRNQAITPQVLLPPLHQEKRSSVSVSPVMGGTALPVSVE 395
Query: 164 VANGL 168
V++GL
Sbjct: 396 VSDGL 410
>TC215223
Length = 2064
Score = 121 bits (303), Expect = 3e-28
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Frame = +1
Query: 52 ITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKR 111
+ VFL V +T+L++W + RP KP FT+ VYA N T L++ Q ++ RNPN R
Sbjct: 322 LVVFLFIVLVTILLIWAILRPTKPTFTLQDVTVYAFNATVANFLTSNFQVTLISRNPNDR 501
Query: 112 VSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSL-SPVIGGTPMPVTVEVANGLAM 170
+ +YYDR FV+YR+Q +T + +PP + + H ++++ SP + GT +PV GL+
Sbjct: 502 IGVYYDRLETFVTYRSQQVTYRTAIPPTY-QGHKEINVWSPFVYGTNIPVAPFNFLGLSQ 678
Query: 171 DESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCDLLV 209
D+S G V + + GRV+WK G + + LYV+C +
Sbjct: 679 DQSNGNVLVTIRAEGRVRWKVGTFISGRYHLYVRCPAFI 795
>TC225915
Length = 959
Score = 117 bits (293), Expect = 4e-27
Identities = 54/158 (34%), Positives = 89/158 (56%)
Frame = +3
Query: 52 ITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKR 111
I +F V +T+L++W + +P KP F + VY N T P L+++ Q + RNPN +
Sbjct: 183 IVIFAFIVLLTVLIIWAILKPSKPTFILQDVTVYGFNATIPNFLTSSFQVTLSSRNPNDK 362
Query: 112 VSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTVEVANGLAMD 171
+ +YYDR +V+YRNQ +T + +PP + + SP + GT +PV GL+ D
Sbjct: 363 IGVYYDRLDTYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVFGTNVPVAPFNFVGLSQD 542
Query: 172 ESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCDLLV 209
++ G V + + G+V+WK G + H+ LYV+C +
Sbjct: 543 QTNGNVLVLVKIDGKVRWKVGTFVSGHYNLYVRCPAFI 656
>TC225916 weakly similar to GB|AAT41789.1|48310278|BT014806 At3g44220
{Arabidopsis thaliana;} , partial (81%)
Length = 986
Score = 115 bits (288), Expect = 2e-26
Identities = 54/158 (34%), Positives = 89/158 (56%)
Frame = +1
Query: 52 ITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKR 111
I +F V +T+L++W + +P KP F + VY N T P L+++ Q + RNPN +
Sbjct: 202 IVIFAFIVLLTVLIIWAILKPSKPTFILQDVTVYGFNATIPNFLTSSFQVTLSSRNPNDK 381
Query: 112 VSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTVEVANGLAMD 171
+ IYYDR + +V+YRNQ +T + +PP + + SP + GT +PV GL+ D
Sbjct: 382 IGIYYDRLNTYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPYNFVGLSQD 561
Query: 172 ESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCDLLV 209
++ G V + + G+V+WK G + H+ L V+C +
Sbjct: 562 QTNGNVLVLVKIDGKVRWKVGSFVSAHYNLNVRCPAFI 675
>TC215224
Length = 1219
Score = 109 bits (273), Expect = 9e-25
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +2
Query: 61 ITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKRVSIYYDRFS 120
+T+L++W + RP KP FT+ VYA N T P L++ Q ++ RNPN + +YYDR
Sbjct: 200 LTILLIWAILRPTKPTFTLQDVTVYAFNATIPNFLTSNFQVTLISRNPNDNIGVYYDRLE 379
Query: 121 AFVSYRNQPITQQVLLPPLFLEKHSQVSL-SPVIGGTPMPVTVEVANGLAMDESYGVVGL 179
+V YR+Q IT + +PP + + H+++++ SP + GT +PV L+ D+S G V +
Sbjct: 380 IYVIYRSQQITYRTAIPPTY-QGHNEINVWSPFVYGTNIPVAPFNFLRLSQDQSDGNVLV 556
Query: 180 KLVFLGRVKWKAGGLRTWHHGLYVKCDLLV 209
+ GRV+WK G + + YV+C +
Sbjct: 557 TIRADGRVRWKVGAFISGRYHFYVRCPAFI 646
>TC228734 weakly similar to UP|Q99738 (Q99738) Pinin, partial (4%)
Length = 1156
Score = 93.6 bits (231), Expect = 7e-20
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Frame = +3
Query: 55 FLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALN-----------TTSPPLLSAALQFNV 103
F+L + + + ++W++ RP KPRF + A VYA N T +P L+ +Q +
Sbjct: 288 FILLILLVIFLIWIILRPTKPRFILQDATVYAFNLSSTGDTPSPITPTPNTLTLTMQVTL 467
Query: 104 LIRNPNKRVSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTVE 163
NPN R+ +YY + A+ +YR Q ++ LP + SP + T +PV+
Sbjct: 468 AAFNPNHRIGVYYTKLDAYAAYRGQQVSVATSLPATYQGHRDTSVWSPYLYATAVPVSPF 647
Query: 164 VANGLAMDESYGVVGLKLVFLGRVKWKAGGLRTWHHGLY---VKCDLLVGLKK------G 214
L D++ G + + + GRVKWK G TW G+Y V C + L G
Sbjct: 648 TLQILQQDKTSGGILVNVKVNGRVKWKVG---TWVSGIYHINVNCPAYLRLAGDRDDAIG 818
Query: 215 FVGQVPLLQA-QACDVDL 231
F G Q Q C VD+
Sbjct: 819 FAGPAVKFQLFQTCIVDV 872
>BE610503
Length = 445
Score = 90.9 bits (224), Expect = 4e-19
Identities = 48/149 (32%), Positives = 82/149 (54%), Gaps = 1/149 (0%)
Frame = +2
Query: 55 FLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKRVSI 114
F V +T+L++W + +P KP F + VY N T P L+++ Q + RNPN ++ +
Sbjct: 2 FAFIVLLTVLIIWAILKPSKPTFILQDVTVYGYNATIPNFLTSSFQVTLSSRNPNDKIGV 181
Query: 115 YYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTVEVANGLAMDESY 174
YYDR +V+YRNQ ++ + +PP + + S + GT +P GL+ D+++
Sbjct: 182 YYDRLDTYVTYRNQQVSYRTSIPPSYHGHKEEDVWSRCVCGTNVPSARCNFVGLSQDQTH 361
Query: 175 GVVGLKLVFL-GRVKWKAGGLRTWHHGLY 202
V L+LV + G V+W+ + H+ LY
Sbjct: 362 RDV-LRLVEIDGDVRWRVCTFVSGHYRLY 445
>TC230031
Length = 847
Score = 73.6 bits (179), Expect(2) = 6e-18
Identities = 33/56 (58%), Positives = 46/56 (81%)
Frame = +1
Query: 149 LSPVIGGTPMPVTVEVANGLAMDESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVK 204
+SP+I G P+PV VEV++ LA+DE+YGVVGL+L+F GRV+ KAG ++ H+G YVK
Sbjct: 331 VSPLIEGMPLPVLVEVSHWLAVDEAYGVVGLRLIFQGRVRLKAGAIKIAHYGFYVK 498
Score = 33.9 bits (76), Expect(2) = 6e-18
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2
Query: 119 FSAFVSYRNQPITQQVLLPPLFLEKHSQVS 148
F++ RNQ IT QVLLPPL EK S VS
Sbjct: 242 FASPTMMRNQAITLQVLLPPLHQEKRSLVS 331
>TC216388 similar to UP|Q8H1B5 (Q8H1B5) Hin1-like protein, partial (43%)
Length = 1056
Score = 85.5 bits (210), Expect = 2e-17
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 8/222 (3%)
Frame = +3
Query: 17 LPPPNKIQMNNHKASPSPYGGGGGGSSPKRAACTFITVF------LLAVGITLLVLWLVY 70
+PPP + + H+ P GGG G C F +F ++ +GI + + WL+
Sbjct: 129 IPPP---KTSYHR----PGRGGGLGCC---CGCLFSLIFKLILTVIIIIGIAVFLFWLIV 278
Query: 71 RPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKRVSIYYDRFSAFVSYRNQPI 130
RP+ +F V A + N T L L N+ +RNPNKR+ IYYDR A + +
Sbjct: 279 RPNVVKFHVTEATLTQFNYTPNNTLHYDLALNITVRNPNKRLGIYYDRIEARAMFHDARF 458
Query: 131 TQQVLLPPLFLEKHSQVS-LSPVIGGTPM-PVTVEVANGLAMDESYGVVGLKLVFLGRVK 188
Q P F + H + L+PV G + P+ + + L + + GV + + RV+
Sbjct: 459 DSQ--FPEPFYQGHKSTNVLNPVFKGQQLVPLNADQSAELKKENATGVYEIDVKMYLRVR 632
Query: 189 WKAGGLRTWHHGLYVKCDLLVGLKKGFVGQVPLLQAQACDVD 230
+K G +T V CDL V L KG G + Q CD D
Sbjct: 633 FKLGVFKTKTLKPKVSCDLRVPL-KGSAG-AGVFQTTKCDWD 752
>TC216389 weakly similar to UP|Q9M663 (Q9M663) Harpin inducing protein
(Hin1), partial (62%)
Length = 667
Score = 83.2 bits (204), Expect = 9e-17
Identities = 65/204 (31%), Positives = 91/204 (43%), Gaps = 8/204 (3%)
Frame = +2
Query: 17 LPPPNKIQMNNHKASPSPYGGGGGGSSPKRAACTFITVF------LLAVGITLLVLWLVY 70
+PPP K S G GGG C F +F ++ VGI V WL+
Sbjct: 95 IPPP--------KTSYHRPGRGGGCC----CGCLFSLIFKLILTVIIIVGIAGFVFWLIV 238
Query: 71 RPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKRVSIYYDRFSAFVSYRNQPI 130
RP+ +F V A + N T+ L L N+ +RNPNKR+ IYYDR A + +
Sbjct: 239 RPNVVKFHVTDATLTQFNYTANNTLHYDLALNITVRNPNKRLGIYYDRIEARAMFHDARF 418
Query: 131 TQQVLLPPLFLEKHSQVS-LSPVIGGTP-MPVTVEVANGLAMDESYGVVGLKLVFLGRVK 188
Q P F + H L+PV G +P+ E + L + + GV + + RV+
Sbjct: 419 DSQ--FPEPFYQGHKSTKVLNPVFKGQQVVPLNAEQSAELKKENATGVYEIDVKMYLRVR 592
Query: 189 WKAGGLRTWHHGLYVKCDLLVGLK 212
+K G L+T V CDL V K
Sbjct: 593 FKLGVLKTNTLKPKVSCDLRVPFK 664
>AW348693 weakly similar to GP|19110824|gb ABC transporter ABCA.5
{Dictyostelium discoideum}, partial (1%)
Length = 699
Score = 73.2 bits (178), Expect = 1e-13
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Frame = -2
Query: 56 LLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKRVSIY 115
++ VGI ++++ LV +P + +TV AA++ T A F + NP RVSIY
Sbjct: 698 IILVGIAVIIIXLVLKPKRLEYTVENAAIHXXXXTDANXXXANFDFTIRSYNPXXRVSIY 519
Query: 116 YDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTV--EVANGLAMDES 173
YD V Y +Q + + P F + H V+ V G T V + V L ++ S
Sbjct: 518 YDTVEVSVRYEDQTLATNAVQP--FFQSHKNVTRLHV-GLTAQTVALYDSVPKDLRLERS 348
Query: 174 YGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCD-LLVGLKKGFVGQVPLLQAQACDVDL 231
G + L + R+++K G ++ H L + C +LV KG + CDV+L
Sbjct: 347 SGDIELDVWMRARIRFKVGVWKSKHRVLKIFCSPVLVHFSKG-----KSFERAPCDVEL 186
>TC214664 weakly similar to GB|AAL31248.1|16974489|AY061921
At2g27080/T20P8.13 {Arabidopsis thaliana;} , partial
(56%)
Length = 1097
Score = 66.2 bits (160), Expect = 1e-11
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Frame = +3
Query: 3 EDPNPPKG-------QNQHHHLPPPNKIQMNNHKASPSPYGGGGGGSSPKRAACTF---- 51
E P PP G ++Q + +PPP + + A R C F
Sbjct: 195 EKPVPPPGTYVIKIPKDQVYRVPPPENARRYDQYARRK--------HRRSRCCCCFCWLI 350
Query: 52 --ITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSA-ALQFNVLIR-- 106
+ + ++ + I VL+LV+RP P++++ V +N TSP ++A + +FNV ++
Sbjct: 351 GILFILVVLLAIAAGVLYLVFRPEAPKYSIENITVRGINLTSPSSVAAISPEFNVTVKAD 530
Query: 107 NPNKRVSI-YYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIGGTPMPVTVEVA 165
NPN ++ I Y SA V Y++ + LP + ++ + G + + E
Sbjct: 531 NPNDKIGIRYLKDSSAEVFYKDARLCNGA-LPAFYHPSNNVTVFGTALRGDGIELRSEDR 707
Query: 166 NGLAMDESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCDLLV 209
L ++ V L + VK K G +RTW + V CD+ V
Sbjct: 708 RALLEAQTKRRVPLTVRIRAPVKIKVGSIRTWKITVKVNCDVTV 839
>TC205403 similar to UP|Q08529 (Q08529) Glycine-rich protein, partial (15%)
Length = 1184
Score = 65.9 bits (159), Expect = 2e-11
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Frame = +2
Query: 43 SPKRAACTF-------ITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALN-TTSPPL 94
S +R CTF + + LL +G+ V +L+YRPH P FTV + LN T+S
Sbjct: 287 SKRRCCCTFFFWLILTVLILLLLIGVAGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNT 466
Query: 95 LSAALQFNVLIRNPNKRVSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPVIG 154
L++ V NPNK++ YD S + + + + +K++ + ++
Sbjct: 467 LNSRFDITVSATNPNKKILFAYDPTSITILSADIDLGDGTVPGFQHPKKNTTLIKGSILS 646
Query: 155 GTPMPVTVEVANGLAMDESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCD-LLVGLKK 213
+ E + + +S + LK+ +VK K G L+T G+ V CD + V L
Sbjct: 647 SGQALQSDEASRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVSLPS 826
Query: 214 GFVGQVPLLQAQACDVDL 231
G CDVD+
Sbjct: 827 GKKPATASTSNAKCDVDV 880
>TC229268 similar to GB|BAB32889.1|13122296|AB047812 hin1 homolog
{Arabidopsis thaliana;} , partial (31%)
Length = 1043
Score = 63.2 bits (152), Expect = 1e-10
Identities = 43/145 (29%), Positives = 69/145 (46%), Gaps = 4/145 (2%)
Frame = +2
Query: 49 CTFITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNP 108
C +T L+ V I + W + RP+ +F V A++ + T+ L L NV IRNP
Sbjct: 242 CKILTTILIIVAILGFLFWFIVRPNVLKFHVTDASLTRFDYTTNNTLHYDLALNVSIRNP 421
Query: 109 NKRVSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVS-LSPVIGGTPM-PVTVEVAN 166
N+RV +YYD A Y++ Q L P F + H + ++P+ G + P+
Sbjct: 422 NRRVGVYYDHIEAHALYQDVLFGNQTLGP--FFQHHKNTTFVNPLFKGQRVTPLAGNQVE 595
Query: 167 GLAMDESYGV--VGLKLVFLGRVKW 189
++ GV + LKL + R K+
Sbjct: 596 VFDKEKGSGVYTIDLKLFMVVRFKF 670
>TC214631 weakly similar to GB|AAL31248.1|16974489|AY061921
At2g27080/T20P8.13 {Arabidopsis thaliana;} , partial
(22%)
Length = 1068
Score = 62.0 bits (149), Expect = 2e-10
Identities = 50/164 (30%), Positives = 82/164 (49%), Gaps = 5/164 (3%)
Frame = +3
Query: 51 FITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSA-ALQFNVLIR--N 107
FI V LA+ VL+LV+RP +P++++ AV +N TSP +A + FNV ++ N
Sbjct: 111 FILVVFLAIAAG--VLYLVFRPEEPKYSIENIAVRGINLTSPSSTAAMSPVFNVTVKADN 284
Query: 108 PNKRVSI-YYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSL-SPVIGGTPMPVTVEVA 165
PN ++ I Y SA V Y++ + L P F + + V++ + G + + EV
Sbjct: 285 PNDKIGIRYLKDSSAEVFYKDARLCNGAL--PAFYQPSNNVTVFGTALRGDGIELRSEVR 458
Query: 166 NGLAMDESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCDLLV 209
L ++ V L + VK K G ++TW + V C + V
Sbjct: 459 RALLEAQTKRRVPLTVRIRAPVKIKVGSVKTWKITVKVNCHMTV 590
>TC208148 similar to UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced protein B13-1-9,
partial (81%)
Length = 658
Score = 61.6 bits (148), Expect = 3e-10
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Frame = +1
Query: 69 VYRPHKPRFTVVGAAVYALNT-TSPPLLSAALQFNVLIRNPNKRVSIYYDRFSAFVSYRN 127
V +P +F V A + + T+ L + N RNPNK++SIYYD+ A Y +
Sbjct: 1 VVQPRSFKFHVTKANLTQFDYYTNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYED 180
Query: 128 QPITQQVLLPPL--FLE-KHSQVSLSPVIGGTP-MPVTVEVANGLAMDESYGVVGLKLVF 183
++ + F + K + +S V G +P+ ++ + L D+S GV + +
Sbjct: 181 VRFANYSVITHMNSFRQYKKTTSHMSAVFSGQQVLPLDNDLVSELNQDKSGGVYEIDVKL 360
Query: 184 LGRVKWKAGGLRTWHHGLYVKCDLLVGLKKGFVGQVPLLQAQACDVD 230
R++++ G ++T VKCD+ V L+ G V L Q CDVD
Sbjct: 361 YFRIRFRLGDVKTRRFKPEVKCDIRVPLRTN--GSVTLFQTTKCDVD 495
>TC230817 similar to UP|Q6MWW7 (Q6MWW7) PE-PGRS FAMILY PROTEIN (Fragment),
partial (3%)
Length = 1064
Score = 61.2 bits (147), Expect = 4e-10
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
Frame = -3
Query: 56 LLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNTTSPPLLSAALQFNVLIRNPNKRVSIY 115
LL VG VL+ +YRP +P F+V + + N T+P ++A + NPN ++
Sbjct: 873 LLLVGAAGTVLYFLYRPQRPTFSVTSLKLSSFNLTTPSTINAKFDLTLSTTNPNDKIIFS 694
Query: 116 YDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVS-LSPVIGGTPMPVTVEVANGL--AMDE 172
YD S + Y + + + P FL + + L + T V + A L +M
Sbjct: 693 YDPTSVSLLYGDTAVASTTI--PSFLHRQRNTTVLQAYVTSTEEVVDSDAAKELNRSMKR 520
Query: 173 SYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCD-LLVGLKKGFVGQVPLLQAQACDVDL 231
+V LK+ +V+ + G +T G+ V CD + V L + AC VD+
Sbjct: 519 KSQLVALKVELETKVEAQMGVFQTPRVGIKVLCDGVAVSLPDDEKPATASAENTACQVDV 340
>TC208827 UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced protein B13-1-9, complete
Length = 768
Score = 61.2 bits (147), Expect = 4e-10
Identities = 47/183 (25%), Positives = 81/183 (43%), Gaps = 5/183 (2%)
Frame = +2
Query: 52 ITVFLLAVGITLLVLWLVYRPHKPRFTVVGAAVYALNT-TSPPLLSAALQFNVLIRNPNK 110
+ ++ VG+ L+ WLV +P +F V A + + T+ L + N RNPNK
Sbjct: 218 LVALIVLVGLVFLIFWLVVQPRSFKFQVTEADLTQFDYYTNNHTLHYNMVLNFTARNPNK 397
Query: 111 RVSIYYDRFSAFVSYRNQPITQQVLLPPLFLEKHSQVSLSPV----IGGTPMPVTVEVAN 166
++SIYYD+ A Y + ++ + + + S SP+ G + + E +
Sbjct: 398 KLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGKKVLMLNSEQVS 577
Query: 167 GLAMDESYGVVGLKLVFLGRVKWKAGGLRTWHHGLYVKCDLLVGLKKGFVGQVPLLQAQA 226
L D+S GV + + R++++ G + + VKC L V K G L +
Sbjct: 578 KLNQDKSDGVYDIYVKLNFRIRFRLGDSISGNLKPKVKCHLKVPFSKS--GTFTLFETTK 751
Query: 227 CDV 229
C V
Sbjct: 752 CSV 760
>AW706382
Length = 419
Score = 59.7 bits (143), Expect = 1e-09
Identities = 24/55 (43%), Positives = 36/55 (64%)
Frame = +2
Query: 84 VYALNTTSPPLLSAALQFNVLIRNPNKRVSIYYDRFSAFVSYRNQPITQQVLLPP 138
VY N T P L+++ Q + RNPN ++ IYYDR + +V+YRNQ +T + +PP
Sbjct: 11 VYGFNATIPNFLTSSFQVTLSSRNPNDKIGIYYDRLNTYVTYRNQQVTYRTSIPP 175
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.140 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,968,104
Number of Sequences: 63676
Number of extensions: 228775
Number of successful extensions: 2567
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 2264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2486
length of query: 231
length of database: 12,639,632
effective HSP length: 94
effective length of query: 137
effective length of database: 6,654,088
effective search space: 911610056
effective search space used: 911610056
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0105.5