TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0100a.11
         (245 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC217102 weakly similar to UP|Q6K1Z7 (Q6K1Z7) Isochorismatase hy...   454  e-128
TC208971                                                              327  3e-90
TC205569 similar to UP|MPPA_SOLTU (P29677) Mitochondrial process...    30  1.3
TC205568 similar to UP|MPPA_SOLTU (P29677) Mitochondrial process...    29  1.7
TC211420 similar to UP|Q8L470 (Q8L470) Small heat shock protein,...    28  3.8
AW568811                                                               28  3.8
BI944139                                                               27  8.5
TC227470 similar to UP|Q8L7V7 (Q8L7V7) AT4g02010/T10M13_2, parti...    27  8.5

>TC217102 weakly similar to UP|Q6K1Z7 (Q6K1Z7) Isochorismatase hydrolase-like
           protein, partial (82%)
          Length = 1178

 Score =  454 bits (1169), Expect = e-128
 Identities = 219/245 (89%), Positives = 232/245 (94%)
 Frame = +2

Query: 1   MVSQIIELLKNEIPLEQECVVLAEDTVNGLVLVDIINGFCTVGAGNLAPRESNRQISEMI 60
           MVSQ +ELLKNEIPLEQE VVLAED VNGLVLVDIINGFCTVGAGNLAPRESN QIS MI
Sbjct: 50  MVSQTVELLKNEIPLEQESVVLAEDAVNGLVLVDIINGFCTVGAGNLAPRESNTQISGMI 229

Query: 61  NESARLARLFCEKNLPVMAFLDSHHPNKPEDPYPPHCIAGTDESNLVPALRWLENETNVT 120
           +ESARLAR+FCEKNLPVMAFLDSHHPNKPEDPYPPHCI G+DESNLVPALRWLENE NVT
Sbjct: 230 SESARLARVFCEKNLPVMAFLDSHHPNKPEDPYPPHCIVGSDESNLVPALRWLENEPNVT 409

Query: 121 LRRKECFDGYIGSAEEDGSNVFVDWVKKNKIRTLLVVGICTDICVLDFVCSTMSAKNRGF 180
           +RRK+CFDGY+GS +EDGSNVFVDWVKKNKI TLLVVG+CTDICVLDFVCSTMSAKNRGF
Sbjct: 410 IRRKDCFDGYLGSIQEDGSNVFVDWVKKNKITTLLVVGVCTDICVLDFVCSTMSAKNRGF 589

Query: 181 LKPLENVVVYSHGCATFDVPLEVARNTKGALAHPQEFLHHMGLYMAKERGAKIANEVLFG 240
           L+PLENVVVYS  CATF+VPLEVARNTKGALAHPQEF+HH+GLYMAKERGAKIANEVLFG
Sbjct: 590 LEPLENVVVYSRACATFNVPLEVARNTKGALAHPQEFMHHVGLYMAKERGAKIANEVLFG 769

Query: 241 AVEKV 245
           A  KV
Sbjct: 770 AAGKV 784


>TC208971 
          Length = 956

 Score =  327 bits (838), Expect = 3e-90
 Identities = 147/237 (62%), Positives = 188/237 (79%)
 Frame = +2

Query: 3   SQIIELLKNEIPLEQECVVLAEDTVNGLVLVDIINGFCTVGAGNLAPRESNRQISEMINE 62
           S   ELL+ EIP++Q+ + L+ D + GLVLVD++NGFCTVGAGNLAP+E + +IS+M+ E
Sbjct: 26  SNTAELLREEIPVKQQPLTLSADIITGLVLVDVVNGFCTVGAGNLAPKEPDERISQMVKE 205

Query: 63  SARLARLFCEKNLPVMAFLDSHHPNKPEDPYPPHCIAGTDESNLVPALRWLENETNVTLR 122
           S RL++ F E+  P+ AFLD HHP+KPE PYPPHCI G+ E  LVP L WLEN+ N TLR
Sbjct: 206 SLRLSKAFSERKWPIFAFLDCHHPDKPEPPYPPHCIIGSGEEKLVPDLLWLENDPNATLR 385

Query: 123 RKECFDGYIGSAEEDGSNVFVDWVKKNKIRTLLVVGICTDICVLDFVCSTMSAKNRGFLK 182
           +KEC DG++GS E+DGSNVF+DWVK N+I+ +LV GICTDICVLDFV S +S +NRGFL 
Sbjct: 386 QKECIDGFLGSTEKDGSNVFIDWVKNNQIKQILVAGICTDICVLDFVSSVLSVRNRGFLT 565

Query: 183 PLENVVVYSHGCATFDVPLEVARNTKGALAHPQEFLHHMGLYMAKERGAKIANEVLF 239
           PLENV+V S  CAT+D+PL VA+  K  ++HPQE +HH+GLY+A  RGA IA+EVLF
Sbjct: 566 PLENVIVSSQACATYDLPLHVAKTNKDFVSHPQELMHHVGLYIASGRGAHIASEVLF 736


>TC205569 similar to UP|MPPA_SOLTU (P29677) Mitochondrial processing
           peptidase alpha subunit, mitochondrial precursor
           (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit
           II)  , partial (19%)
          Length = 497

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 23/58 (39%), Positives = 28/58 (47%), Gaps = 2/58 (3%)
 Frame = -3

Query: 85  HPNKPEDPYPPHCIAGTDESNLVPA--LRWLENETNVTLRRKECFDGYIGSAEEDGSN 140
           HPNKP  P    C+A T+  NL  A  L  L     +TLRR+  F    GS   D S+
Sbjct: 243 HPNKPPKPEEDCCVA-TELENLALAGILLLLHERALMTLRREAAFLYMSGSRIFDFSS 73


>TC205568 similar to UP|MPPA_SOLTU (P29677) Mitochondrial processing
           peptidase alpha subunit, mitochondrial precursor
           (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit
           II)  , partial (93%)
          Length = 1943

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 17/46 (36%), Positives = 22/46 (46%), Gaps = 3/46 (6%)
 Frame = -3

Query: 85  HPNKPEDPYPPHCIAGTDESNLVPA---LRWLENETNVTLRRKECF 127
           HPNKP  P    C   T+ +NL  A   L  L +   + LRR+  F
Sbjct: 306 HPNKPPKPEEEDCCVATELANLALAGTLLLLLHDGALMALRREAAF 169


>TC211420 similar to UP|Q8L470 (Q8L470) Small heat shock protein, partial
           (33%)
          Length = 514

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 15/40 (37%), Positives = 22/40 (54%), Gaps = 7/40 (17%)
 Frame = -2

Query: 66  LARLFCEKNLPVMAFLDSHH-------PNKPEDPYPPHCI 98
           LA L+C +NLP+  F+ S +        N+   P+P HCI
Sbjct: 252 LAFLYCPRNLPLTVFIISRNYHR*SSTINQEILPHPLHCI 133


>AW568811 
          Length = 394

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 128 DGYIGSAEEDGSNVFVDWVKKNK 150
           D  +GSA  + SNVF+ W K NK
Sbjct: 294 DRLVGSAPYNESNVFLSWQKTNK 226


>BI944139 
          Length = 405

 Score = 26.9 bits (58), Expect = 8.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 106 LVPALRWLENETNVTLRRKECFDGYIGSAEEDGS 139
           L+  L WL   T    R++ CF GY+  +  +GS
Sbjct: 199 LLQLLSWLYFFTLPCFRQRSCFKGYLDISASEGS 98


>TC227470 similar to UP|Q8L7V7 (Q8L7V7) AT4g02010/T10M13_2, partial (34%)
          Length = 1061

 Score = 26.9 bits (58), Expect = 8.5
 Identities = 18/72 (25%), Positives = 35/72 (48%)
 Frame = +1

Query: 8   LLKNEIPLEQECVVLAEDTVNGLVLVDIINGFCTVGAGNLAPRESNRQISEMINESARLA 67
           +L+++  LE+    LA+  + G    +     CT+ A  +AP  S R     + +S ++ 
Sbjct: 397 ILRDKDRLEE----LADPRLGGRYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMV 564

Query: 68  RLFCEKNLPVMA 79
           +   E + PV+A
Sbjct: 565 QRITESHDPVLA 600


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.320    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,714,838
Number of Sequences: 63676
Number of extensions: 170740
Number of successful extensions: 745
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of query: 245
length of database: 12,639,632
effective HSP length: 95
effective length of query: 150
effective length of database: 6,590,412
effective search space: 988561800
effective search space used: 988561800
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)