BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0094b.11
(1170 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG789506 108 1e-23
TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 44 3e-04
TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxida... 44 4e-04
TC226736 similar to UP|Q9SEE9 (Q9SEE9) Arginine/serine-rich prot... 44 4e-04
TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (... 43 0.001
CO979002 42 0.002
CK605828 42 0.002
TC230349 weakly similar to UP|Q15287 (Q15287) RNA-binding protei... 41 0.004
TC206672 weakly similar to UP|Q7UTL3 (Q7UTL3) 3-hydroxyisobutyra... 40 0.005
TC217786 weakly similar to UP|Q6V9I6 (Q6V9I6) Histone deacetylas... 40 0.005
TC207981 similar to UP|PTI6_LYCES (O04682) Pathogenesis-related ... 40 0.005
TC203971 homologue to UP|Q6UCJ3 (Q6UCJ3) Ubiquitin extension pro... 40 0.005
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin... 40 0.005
TC220974 similar to UP|MP62_LYTPI (P91753) Mitotic apparatus pro... 40 0.008
TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {A... 39 0.010
TC213998 similar to UP|Q9SGC7 (Q9SGC7) T23G18.19, partial (21%) 39 0.010
TC216615 similar to GB|AAN64534.1|24797044|BT001143 At5g12410/At... 39 0.010
TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 39 0.010
TC212534 similar to GB|AAP21144.1|30102452|BT006336 At5g01500/F7... 39 0.013
TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell... 39 0.013
>BG789506
Length = 387
Score = 108 bits (270), Expect = 1e-23
Identities = 55/108 (50%), Positives = 74/108 (67%), Gaps = 3/108 (2%)
Frame = +1
Query: 268 SFSRFIKDHY--VESGEVSDAEHVAFLLYWLSAYVFCTKSLRIPAKLLPLANLLHEGRQL 325
+FS++I +H VE EVSD EHVAFL WLS YVFCTKSL++ + +P+A +HEG+
Sbjct: 10 TFSKYIAEHKGSVEE-EVSDEEHVAFLTLWLSHYVFCTKSLQVAKRFIPMALQIHEGQNF 186
Query: 326 AMARLVLGNLYQMLNEAVEDIRNTKT-VSLNAAGPLWLFQLWLNAVFE 372
RL+L LY+ L EA +D++ +K S +GP+WL QLWLNA FE
Sbjct: 187 GFGRLLLAVLYESLGEACDDLKKSKDGSSFLVSGPMWLLQLWLNATFE 330
>TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (63%)
Length = 1144
Score = 44.3 bits (103), Expect = 3e-04
Identities = 42/192 (21%), Positives = 77/192 (39%)
Frame = +3
Query: 727 ASRDEDDDDDDEDDDVSLADKLKSRKRKPKPVASASQKRAKGAGVSTTSGASKLASDAQP 786
A ++D+ D D+D + + KP+ A + V+ SG++K +P
Sbjct: 354 ADNSDEDEFTDSDEDDEDVPLINTENGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEP 533
Query: 787 EVDDKEGGGDAAIQADVHEHSTSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTS 846
+ D++E D + D S+ +S + + + + + E PPK KK
Sbjct: 534 KKDNEEDSDDDSDDDDF--GSSDEEMEDADSDSDDESGDEDDDEETPPKKVDLGKKRP-- 701
Query: 847 EGRRKVRSKSGHKSPRRSRSSTNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPK 906
++S K+P S+ + N++P K +G A P P K P +
Sbjct: 702 -------NESASKTPVSSKKAKNATPEKTDG---KKGG----HTATPHPAKKGGKTPNSE 839
Query: 907 STATVQPSPQAK 918
+ A P+ +AK
Sbjct: 840 AKAKT-PNSEAK 872
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Frame = +3
Query: 720 MRIGQGQASRDEDDDDDDEDDDVSLADKL----------------KSRKRKPKPVASASQ 763
+++ + + +ED DDD +DDD +D+ + PK V
Sbjct: 516 VKVVEPKKDNEEDSDDDSDDDDFGSSDEEMEDADSDSDDESGDEDDDEETPPKKVDLG-- 689
Query: 764 KRAKGAGVSTTSGASKLASDAQPEVDDKEGGGDAAIQADVHEHSTSNPPSRENSPAPN-P 822
K+ S T +SK A +A PE D + GG H+ + P+++ PN
Sbjct: 690 KKRPNESASKTPVSSKKAKNATPEKTDGKKGG----------HTATPHPAKKGGKTPNSE 839
Query: 823 AKSK---AEGVEKPPK----AASSAKKTSTSEGRRKVRSKSGH 858
AK+K +E K PK + + K+ T+E + +K+ H
Sbjct: 840 AKAKTPNSEAKAKTPKSGGLSCKTCSKSFTNESGLQQHNKAKH 968
>TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxidase ATP26a
{Arabidopsis thaliana;} , partial (49%)
Length = 731
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/118 (25%), Positives = 48/118 (40%)
Frame = +3
Query: 811 PPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSSTNS 870
P SPAP P PP++ASS+ S+ S SP S + T++
Sbjct: 147 PSQASRSPAPPPP---------PPRSASSSTTASSPTAVTPPSSSPPRPSPGPSATPTST 299
Query: 871 SPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGSSSHVSSE 928
SPS + + P+ P P PPP +T++ + + SS+ ++E
Sbjct: 300 SPSPATPSTSSSAPRPPLSSPAPTPSPAPTFSPPPPATSSPCSAAPSSPSSSAAATAE 473
Score = 33.9 bits (76), Expect = 0.43
Identities = 41/173 (23%), Positives = 60/173 (33%), Gaps = 15/173 (8%)
Frame = +3
Query: 755 PKPVASASQKRAKGAGVSTTSGASKLASDAQPEVDDKEGGGDAAIQADVHEHSTSNPPSR 814
P P SAS + + T +S S +P + S+S P
Sbjct: 180 PPPPRSASSSTTASSPTAVTPPSS---SPPRPSPGPSATPTSTSPSPATPSTSSSAPRPP 350
Query: 815 ENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPR-----------R 863
+SPAP P S A PP A SS + S + + SP
Sbjct: 351 LSSPAPTP--SPAPTFSPPPPATSSPCSAAPSSPSSSAAATAEPPSPPPYPPTSPPPPCP 524
Query: 864 SRSSTNSSPSKESACQETQGAISPIRE----AEPLPGKDDNPMPPPKSTATVQ 912
S S NSSP+ S + + ++ P A +PPP + AT++
Sbjct: 525 SLKSPNSSPNAASPSKNSSPSVGPTPSDSLTAPSSSRTSPTTLPPPTTLATLR 683
>TC226736 similar to UP|Q9SEE9 (Q9SEE9) Arginine/serine-rich protein, partial
(63%)
Length = 1243
Score = 43.9 bits (102), Expect = 4e-04
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Frame = +2
Query: 812 PSRENSPAPNPAK-SKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRS---- 866
P R SP P P + S PP+ + ++ + S RR RS+S SPRR R
Sbjct: 608 PGRRRSPPPPPRRRSPPRRPRSPPRRSPIGRRRTRSPIRRSARSRSRSFSPRRGRPPVRR 787
Query: 867 ------STNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQP 913
S + SP K S +++ P+R + PPP T +P
Sbjct: 788 GRSSSYSDSPSPRKVSRRSKSRSPRRPLRGRGSSNSSSSSSPPPPPPPPTRKP 946
Score = 31.6 bits (70), Expect = 2.1
Identities = 29/114 (25%), Positives = 47/114 (40%), Gaps = 4/114 (3%)
Frame = +2
Query: 812 PSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRK-VRSKSGHKSPRRS---RSS 867
P R+ N + + K + +S +K S RR V ++G SPRR R
Sbjct: 272 PKRDTPRTDNASADVDKDGPKRQRESSPRRKPPPSPRRRSPVPRRAG--SPRRPDSPRRR 445
Query: 868 TNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGS 921
+S + +G +P R PG+ +P PP + + + SP+ GS
Sbjct: 446 ADSPVRRRVDSPYRRGGDTPPRRRPVSPGRGRSPSPPRRLRSPARLSPRRMRGS 607
>TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1),
partial (3%)
Length = 784
Score = 42.7 bits (99), Expect = 0.001
Identities = 55/242 (22%), Positives = 87/242 (35%), Gaps = 15/242 (6%)
Frame = +3
Query: 742 VSLADKLKSRKRKPK-PVASASQKRAKGAGVSTTSGASKLASDAQPEVDDKEGGGDAAIQ 800
+SL+ L R RKP+ P SQ + TT+ + + P + ++
Sbjct: 9 LSLSLSLSPRWRKPRAPPPHRSQTPTR-----TTTATRRTTTSTLPPASPRSSSPPSSPP 173
Query: 801 ADVHEHSTSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKS 860
+ ++S P N+P +P+ SK P +A+S TS R SKS
Sbjct: 174 SPSTTPTSSAPG---NAPHSSPSASKRRPTPSGPSSAASTSPKPTSTSSRAAPSKSPFTW 344
Query: 861 PRRSRSSTNSSPSK------ESACQETQGAISP--------IREAEPLPGKDDNPMPPPK 906
P S ++ SSP+ ++ T A SP A P P
Sbjct: 345 PSASLGTSMSSPASPPPPAPNASTSSTTSAASPALASSAANTASATTAPSLPSIPSRTTP 524
Query: 907 STATVQPSPQAKGGSSSHVSSEKLDTLFEEDPLAALDGFLDGTLEWDSPPHQADSTAETA 966
+TA PS S+S ++ K + P ++ + SPP + TA
Sbjct: 525 TTARSTPSSSNPTSSTSPTATPKRTRVSSPTPSSS-------STSRSSPPSPKEPTATVT 683
Query: 967 QS 968
S
Sbjct: 684 VS 689
>CO979002
Length = 694
Score = 42.0 bits (97), Expect = 0.002
Identities = 27/88 (30%), Positives = 41/88 (45%), Gaps = 9/88 (10%)
Frame = -1
Query: 773 TTSGASKLASDAQPEVDD--KEGGGDAAIQADVHEHSTSNPPSRENSPAPNPAKSK---- 826
TT+ + D P + D + G+ + +D + NPPS ++ PAP P K
Sbjct: 682 TTTITTTTVPDDPPHLYDSNRSAPGEDGLFSDFEQDEEKNPPSNKDIPAPIPISEKQYLR 503
Query: 827 ---AEGVEKPPKAASSAKKTSTSEGRRK 851
AEGV + S+ + STS+G RK
Sbjct: 502 RCQAEGVTNEKLSTSNPEMGSTSQGERK 419
>CK605828
Length = 553
Score = 42.0 bits (97), Expect = 0.002
Identities = 43/178 (24%), Positives = 61/178 (34%), Gaps = 10/178 (5%)
Frame = +2
Query: 753 RKPKPVASASQKRAKGAGVSTTSGASKLASDAQPEVDDKEGGGDAAIQADVHEHSTSNPP 812
+ P P K+ K G G K +PE ++ G Q PP
Sbjct: 5 KNPGPRVKKKLKKKKQGGKKKKGGGKK---GKKPEKPPQKKGPPNPPQK-------GGPP 154
Query: 813 SR----ENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSST 868
+ EN P P K G PPK + K+ +K + K G +PR
Sbjct: 155 KKPL*HENPPGPQGGKKNKGGS*NPPKRGPAQKRGPP----KKTQKKGGEGTPRPPFGGR 322
Query: 869 NSSPSKESACQETQGAISPIREAEPLPGKDDN------PMPPPKSTATVQPSPQAKGG 920
P++ + Q +P RE P P K P PK T ++ P+ GG
Sbjct: 323 RGGPTRGNPPQGGYHPQTPPRENPPPPKKKPEGGGGGPPGANPKKTGGLKGPPKRGGG 496
Score = 30.4 bits (67), Expect = 4.7
Identities = 33/170 (19%), Positives = 55/170 (31%), Gaps = 25/170 (14%)
Frame = +1
Query: 779 KLASDAQPEVDDKEGGGDAAIQADVHEHSTSNPPSRENSPAPNPAKS------------- 825
K + Q ++ K+ GG+ + P ++ P P P +
Sbjct: 7 KPGAKGQKKIKKKKTGGEKKKRGGEKREKARKTPPKKRPPKPPPKRGPPQKTPLTRKPPR 186
Query: 826 ------KAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPR------RSRSSTNSSPS 873
K G KPP+ AKK + +K K G ++P+ ++ P
Sbjct: 187 TPGGQKKQGGFIKPPQKGPGAKKGAP----QKNPKKGGGRNPKAPLWGAAGGANPGKPPP 354
Query: 874 KESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGSSS 923
+ P E + G P PK V+ +PQ GG +
Sbjct: 355 RGIPPPNPPAGKPPPPEKKTRRGGGGPPRGQPKKNRGVKRAPQKGGGKGN 504
>TC230349 weakly similar to UP|Q15287 (Q15287) RNA-binding protein S1,
serine-rich domain, partial (12%)
Length = 479
Score = 40.8 bits (94), Expect = 0.004
Identities = 34/113 (30%), Positives = 43/113 (37%)
Frame = +2
Query: 811 PPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSSTNS 870
PP SP+ P+ S A A S A STS S S S S +ST
Sbjct: 104 PPRPSTSPSGPPSPSSA--------APSRASPASTSP*A----STSSPPSTAASDASTKP 247
Query: 871 SPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGSSS 923
SPS + + +PI + P P + P P S + PSP S S
Sbjct: 248 SPSSNALSKSPTSNAAPITPSPPSPATCSSATPSPCSARSTDPSPATTKASRS 406
>TC206672 weakly similar to UP|Q7UTL3 (Q7UTL3) 3-hydroxyisobutyrate
dehydrogenase , partial (76%)
Length = 1230
Score = 40.4 bits (93), Expect = 0.005
Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Frame = +2
Query: 809 SNPPSRENSPAPNPAKSKAEG-VEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSS 867
+ P +P P P+ S G PP S TS+S R+ + S S
Sbjct: 152 ATPSPSSTAPPPRPSPSSTSGPTSPPPPTPSQPAPTSSSPSSATPRTSAQSSSTPPPAPS 331
Query: 868 TNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATV-------QPSPQAK 918
S+P+ S+ SP + PLP K PP AT Q SP K
Sbjct: 332 PPSAPAASSST*PPPNPPSPSKSRTPLPPKAATQSTPPCPAATAARRTEP*QSSPAGK 505
Score = 40.0 bits (92), Expect = 0.006
Identities = 31/111 (27%), Positives = 47/111 (41%)
Frame = +2
Query: 807 STSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRS 866
+T +P S P P+P+ S + PP S TS+S S + ++ +S S
Sbjct: 152 ATPSPSSTAPPPRPSPS-STSGPTSPPPPTPSQPAPTSSSP------SSATPRTSAQSSS 310
Query: 867 STNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQA 917
+ +PS SA + P P P K P+PP +T + P P A
Sbjct: 311 TPPPAPSPPSAPAASSST*PP--PNPPSPSKSRTPLPPKAATQSTPPCPAA 457
>TC217786 weakly similar to UP|Q6V9I6 (Q6V9I6) Histone deacetylase, partial
(48%)
Length = 1193
Score = 40.4 bits (93), Expect = 0.005
Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 8/155 (5%)
Frame = +2
Query: 724 QGQASRDEDDDDDDEDDDVSLADKLKSRKRKPKPVASASQKRAKGAGVSTTSGASKLASD 783
Q ++ DED DD DED VS A+ + K A++ + K +S+ SD
Sbjct: 344 QSESDNDEDSDDFDEDIPVSAANGKPEIEVKNGIKPDANEAKQKKIANGEDEDSSESESD 523
Query: 784 AQPEVDDKEGGGDAAIQA---DVHEHSTSNPPSRENSPAPNPAKSKAEGVEKPPKAASSA 840
D GD D + + S E +P A +K G++ K
Sbjct: 524 DDSSEDQLTANGDIESSEGDDDSDDEEEGDDESDEETPKKIEASNK-RGIDSSKKTPVPV 700
Query: 841 KKT-----STSEGRRKVRSKSGHKSPRRSRSSTNS 870
KKT ++ + V + H S + +++ N+
Sbjct: 701 KKTKFVTPQKTDSKNVVHVATPHPSKQTGKATANN 805
>TC207981 similar to UP|PTI6_LYCES (O04682) Pathogenesis-related genes
transcriptional activator PTI6, partial (25%)
Length = 925
Score = 40.4 bits (93), Expect = 0.005
Identities = 40/166 (24%), Positives = 63/166 (37%)
Frame = +1
Query: 703 NFPYHVPVEIFNHISLNMRIGQGQASRDEDDDDDDEDDDVSLADKLKSRKRKPKPVASAS 762
NF YH+ V H+ + +++ + S D KSR P A+A+
Sbjct: 79 NFLYHIIVPFPLHLLITLQL------------PPHRNKT*SARDPTKSRHLPPPRPAAAT 222
Query: 763 QKRAKGAGVSTTSGASKLASDAQPEVDDKEGGGDAAIQADVHEHSTSNPPSRENSPAPNP 822
A G+G G + S P G + + + ST+ PPS +P P+P
Sbjct: 223 SSAASGSG---RGGGGRPRSATPPA--GNASGSEPSTRRRKPPRSTTEPPSNSRAPTPSP 387
Query: 823 AKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSST 868
TS RR++R +S H+SPR + + T
Sbjct: 388 ----------------------TSPSRRRLR-RSLHRSPRTTSAPT 456
>TC203971 homologue to UP|Q6UCJ3 (Q6UCJ3) Ubiquitin extension protein,
partial (97%)
Length = 627
Score = 40.4 bits (93), Expect = 0.005
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +2
Query: 809 SNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSST 868
S+P S + AP P + P +SSA + RR+ SPRRS +ST
Sbjct: 164 SSPESSWRTDAPLPTTTSRRS---PLSTSSSASAAAPRSARRRPTP-----SPRRSSTST 319
Query: 869 --NSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPS 914
+SSPS S T + + P+P P P STAT S
Sbjct: 320 RRSSSPSSSSTRSTTPASSRGSARSAPMPNVAPGPSWPTTSTATTVAS 463
>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (58%)
Length = 1213
Score = 40.4 bits (93), Expect = 0.005
Identities = 30/115 (26%), Positives = 48/115 (41%)
Frame = +1
Query: 808 TSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSS 867
T++P S +++P+ P+ + + PPK S+AK S S ++ +S S S
Sbjct: 112 TTSPASSQSTPSSPPSTTTSPSPTSPPK--STAKPPSPSAPSTTPPCRTFSRSTPPSTPS 285
Query: 868 TNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGSS 922
SSPS S+ + + A P P + P PP SP + S
Sbjct: 286 RTSSPSTSSSTTSAPRSSTRSPTAPPSPPQCTKPPAPPPDPPASSTSPTSTAEKS 450
Score = 39.3 bits (90), Expect = 0.010
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +1
Query: 808 TSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKS--PRR-- 863
+S+PPS + +P ++S PP +S TS + K S S + P R
Sbjct: 85 SSSPPSPTRTTSPASSQSTPSS---PPSTTTSPSPTSPPKSTAKPPSPSAPSTTPPCRTF 255
Query: 864 SRSSTNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGSSS 923
SRS+ S+PS+ S+ + S R + P P PP+ T P P S+S
Sbjct: 256 SRSTPPSTPSRTSSPSTSSSTTSAPRSSTRSP---TAPPSPPQCTKPPAPPPDPPASSTS 426
Query: 924 HVSS 927
S+
Sbjct: 427 PTST 438
Score = 38.5 bits (88), Expect = 0.017
Identities = 34/118 (28%), Positives = 52/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 805 EHSTSNPPSRENSPAP-NPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRR 863
+ + S+PPS SP+P +P KS A KPP S ST+ R + +P R
Sbjct: 133 QSTPSSPPSTTTSPSPTSPPKSTA----KPP----SPSAPSTTPPCRTFSRSTPPSTPSR 288
Query: 864 SRSSTNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGS 921
+ S + SS + + T+ +P + P K P P P +++T S K S
Sbjct: 289 TSSPSTSSSTTSAPRSSTRSPTAP--PSPPQCTKPPAPPPDPPASSTSPTSTAEKSHS 456
Score = 38.1 bits (87), Expect = 0.023
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = +1
Query: 807 STSNPPSRENSPA--PNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRS 864
+TS P S SP P+P + P ASS TST+E + SP+RS
Sbjct: 316 TTSAPRSSTRSPTAPPSPPQCTKPPAPPPDPPASSTSPTSTAEKSHSPPKTTTAHSPQRS 495
Query: 865 RSSTNSSPSKESACQ---ETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAK 918
S+P K+S SP+ + +PL +P PP K++ T+ + A+
Sbjct: 496 -----SNP*KKSLTTSQ*SRSAKFSPLPQRKPL-----HPHPPNKTSPTLCQNTDAR 636
>TC220974 similar to UP|MP62_LYTPI (P91753) Mitotic apparatus protein p62,
partial (7%)
Length = 436
Score = 39.7 bits (91), Expect = 0.008
Identities = 31/120 (25%), Positives = 50/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 824 KSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSSTNSSPSKESACQETQG 883
K + +++PP A+SS + E + + S K+ +S +E +E +
Sbjct: 76 KLRPSPLDEPPTASSS----DSEEEEPQQQQPSSQKNKEEEDEEVSSGEEEEEDEEEEEA 243
Query: 884 AISPIREAE---PLPGKDDNPMPPPKSTATVQPSPQAKGGSSSHVSSEKLDTLFEEDPLA 940
A S E + P P NP PPP + S +++ S S SE T + PLA
Sbjct: 244 ASSEEEEEDEDLPPPPVSKNPPPPPANPQPQHSSSESETESGSETESEPDPTPVKVKPLA 423
>TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {Arabidopsis
thaliana;} , partial (68%)
Length = 1307
Score = 39.3 bits (90), Expect = 0.010
Identities = 43/168 (25%), Positives = 66/168 (38%), Gaps = 8/168 (4%)
Frame = +2
Query: 811 PPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSP--RRSRSST 868
PP+ N+P P A PP + S + TS++ S +P RR+ SST
Sbjct: 626 PPTPTNAPPPPSPPPSAT----PPSSTSPSPSTSSTSAAPSPPSTPSSNTPSARRTSSST 793
Query: 869 NSSPSKESACQETQGAIS-PIREAEPLPGKDDNPMPPPKSTATVQPS--PQAKGGSSSHV 925
+SSP S +++ R +P PPP + PS P+ +SS+
Sbjct: 794 SSSPKPTSNPSSNPPSLN*TSRSITLIPRSSAT*SPPPSDKPSNNPSTTPEITSLTSSNP 973
Query: 926 SSEKLDT---LFEEDPLAALDGFLDGTLEWDSPPHQADSTAETAQSSG 970
+S L T ++ G LE +PP A T+ + G
Sbjct: 974 ASRGLYTSTPIWFSSTTLPSSGAPV*VLEPLAPPSTATPTSPSTSPQG 1117
>TC213998 similar to UP|Q9SGC7 (Q9SGC7) T23G18.19, partial (21%)
Length = 519
Score = 39.3 bits (90), Expect = 0.010
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = +1
Query: 807 STSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRK--VRSKSGHKSPRRS 864
S S+ PS + PA P+ S A PPK A S+ K + S +K + + K
Sbjct: 40 SRSSAPSPK-PPASTPSPSSASCQNNPPKRAPSSPKQAQSPTSQKPSIPLLTPPKKTPLP 216
Query: 865 RSSTNSSPSKESAC----QETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQA 917
SST+ SP + +C T S + P +P PPP + ++ + +P A
Sbjct: 217 HSSTSPSP*RSPSCPHVASSTPSPTSSLTTTPPPLPLRFSPPPPPSTASSPRSTPTA 387
>TC216615 similar to GB|AAN64534.1|24797044|BT001143 At5g12410/At5g12410
{Arabidopsis thaliana;} , partial (62%)
Length = 1419
Score = 39.3 bits (90), Expect = 0.010
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 727 ASRDEDDDDDDEDDDVSLADKLKSRKRKPKPVASASQKRAKGAGVSTTSGASKLASDAQP 786
+S +DDDDDDE+++V D+ K K KPK S + GV S K+
Sbjct: 302 SSSSDDDDDDDEEEEVQEGDEEKGDK-KPKLDTSNDDNTSHDDGVPEKSDPHKVDEPHTQ 478
Query: 787 EVD---DKEGGGD 796
EVD D +G D
Sbjct: 479 EVDETCDNKGAND 517
>TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (24%)
Length = 808
Score = 39.3 bits (90), Expect = 0.010
Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 22/153 (14%)
Frame = +1
Query: 728 SRDEDDDDDDEDDDVSLADKL-----------------KSRKRKPKPVASASQKRAKGAG 770
+ ++ DDD DEDDD +D+ + PK + K+
Sbjct: 172 NEEDSDDDSDEDDDFGSSDEEMEDADSDSDDESDDKEDDDEETHPKNKKADLGKKRPNES 351
Query: 771 VSTTSGASKLASDAQPEVDDKEGGGDAAIQADVHEHSTSNPPSRENSPAPNPAKSKAEGV 830
S T +SK A +A PE D + GG A T +P + + AK+K
Sbjct: 352 ASKTPVSSKKAKNATPEKTDGKKGGHTA---------TPHPAKKGGKTPSSEAKAKTPNN 504
Query: 831 E-KPPK----AASSAKKTSTSEGRRKVRSKSGH 858
E K P + S K+ SE + +K+ H
Sbjct: 505 EAKTPMSGGLSCKSCSKSFNSESGLQQHNKAKH 603
>TC212534 similar to GB|AAP21144.1|30102452|BT006336 At5g01500/F7A7_20
{Arabidopsis thaliana;} , partial (21%)
Length = 476
Score = 38.9 bits (89), Expect = 0.013
Identities = 41/129 (31%), Positives = 59/129 (44%), Gaps = 3/129 (2%)
Frame = +3
Query: 807 STSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGH--KSPRRS 864
S+SNPP + +P PA +K P ASS + + + R + G+ K+ R
Sbjct: 105 SSSNPPPTTSFSSPPPAPAKTT-----PSPASSLRPVAPAVNSPASRWQKGNSTKNSRPR 269
Query: 865 RSSTNSSPSKESAC-QETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGSSS 923
R S S+PS S +T + SP PLP NP PP STA+ SS
Sbjct: 270 RHSFCSTPSPSSHWFPKTPPSFSPA----PLPAPPRNPSLPP-STAS---------SSSC 407
Query: 924 HVSSEKLDT 932
+++ +LDT
Sbjct: 408 RLTACELDT 434
>TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell wall
protein gp1 precursor (Hydroxyproline-rich glycoprotein
1), partial (13%)
Length = 1409
Score = 38.9 bits (89), Expect = 0.013
Identities = 35/119 (29%), Positives = 49/119 (40%)
Frame = +3
Query: 808 TSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSS 867
TS PS +SP+P A S + PP S++ TS S S + SP +
Sbjct: 327 TSPSPSPPSSPSPPSAPSPSSTAPSPP---SASPPTSPSPSPPSPASTASANSPASGSPT 497
Query: 868 TNSSPSKESACQETQGAISPIREAEPLPGKDDNPMPPPKSTATVQPSPQAKGGSSSHVS 926
+ +SP+ S T +P + P +P P P S PSP A +SH S
Sbjct: 498 SRTSPTSPSP-TSTSKPPAPSSSSPA*PSSKPSPSPTPISP---DPSP-ATSTPTSHTS 659
Score = 35.8 bits (81), Expect = 0.11
Identities = 32/120 (26%), Positives = 47/120 (38%), Gaps = 1/120 (0%)
Frame = +3
Query: 808 TSNPPSRENSPAPNPAKSKAEGVEKPPKAASSAKKTSTSEGRRKVRSKSGHKSPRRSRSS 867
+++PP R +PAP+P + P +A+S+ S + P S
Sbjct: 207 STSPPHR--TPAPSPPSTMPPSATPPSPSATSSPSASPTA------------PPTSPSPS 344
Query: 868 TNSSPSKESACQETQGAISPIREAEPLPGKDDNPMP-PPKSTATVQPSPQAKGGSSSHVS 926
SSPS SA + A SP P +P P PP +T + A G +S S
Sbjct: 345 PPSSPSPPSAPSPSSTAPSP-----PSASPPTSPSPSPPSPASTASANSPASGSPTSRTS 509
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,804,529
Number of Sequences: 63676
Number of extensions: 808854
Number of successful extensions: 10018
Number of sequences better than 10.0: 377
Number of HSP's better than 10.0 without gapping: 7246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8872
length of query: 1170
length of database: 12,639,632
effective HSP length: 108
effective length of query: 1062
effective length of database: 5,762,624
effective search space: 6119906688
effective search space used: 6119906688
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0094b.11