BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0091b.8
(200 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225662 weakly similar to UP|Q9XIM7 (Q9XIM7) Cold acclimation p... 334 1e-92
TC225660 similar to UP|Q84LB4 (Q84LB4) Cold acclimation protein ... 314 2e-86
TC225659 similar to UP|Q9FUW4 (Q9FUW4) Cold acclimation protein ... 219 7e-58
BF324465 similar to GP|11127595|db cold acclimation protein homo... 139 1e-55
BU549097 similar to GP|10121845|gb cold acclimation protein WCOR... 150 2e-54
TC225658 similar to UP|Q9SVL6 (Q9SVL6) Cold acclimation protein ... 160 4e-40
AW309433 weakly similar to PIR|G85439|G854 cold acclimation prot... 95 2e-20
TC229252 51 3e-07
TC225661 homologue to UP|Q84LB4 (Q84LB4) Cold acclimation protei... 49 2e-06
TC221720 homologue to UP|Q8LLD9 (Q8LLD9) BEL1-related homeotic p... 30 0.74
BQ743071 similar to PIR|T51575|T51 2-hydroxyphytanoyl-CoA lyase-... 29 1.7
CD396188 weakly similar to GP|6175788|gb|A ORF144 {Xestia c-nigr... 29 1.7
TC227352 similar to UP|Q9LVJ1 (Q9LVJ1) Cucumisin-like serine pro... 28 2.2
BM092753 28 3.7
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 27 4.8
TC218197 weakly similar to GB|AAC19269.1|3193285|T14P8 coded for... 27 4.8
TC227722 27 4.8
TC209660 homologue to GB|AAP47431.1|32331807|AY164857 RTNLB9w {G... 27 6.3
TC210567 27 8.2
TC213126 weakly similar to UP|Q94A79 (Q94A79) AT3g49250/F2K15_11... 27 8.2
>TC225662 weakly similar to UP|Q9XIM7 (Q9XIM7) Cold acclimation protein
WCOR413-like protein alpha form (Triticum aestivum)
(Cold acclimation protein homolog) (At2g15970/F19G14.3),
partial (91%)
Length = 1056
Score = 334 bits (857), Expect = 1e-92
Identities = 165/200 (82%), Positives = 183/200 (91%)
Frame = +1
Query: 1 MWKGMNFREAEAADLINSDFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIAAIYLL 60
MWK F E EA LINSDFRDLSLAA +LA+HA+ LG G GFGASFFGL AAIAAIYLL
Sbjct: 76 MWKRTGFEE-EAVQLINSDFRDLSLAANRLAHHAIKLG-GIGFGASFFGLFAAIAAIYLL 249
Query: 61 VLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLE 120
+LDRTNWKTNILT LLIPYIFFSLPS+IF+VFRGE+GKWIA VA+VLR+F+P+HFPDWLE
Sbjct: 250 ILDRTNWKTNILTALLIPYIFFSLPSLIFDVFRGELGKWIAAVAVVLRLFLPRHFPDWLE 429
Query: 121 LPAALIILIVVAPGLIANTFRDNIVGVVVCLVIACYLLQEHIRASGGFRNSFTKANGVSN 180
LP ALI+LIVVAP LIA+TFRDNIVGVVVCL+IACYLLQEHIRASGGFRNSFTKA+G+SN
Sbjct: 430 LPGALILLIVVAPSLIASTFRDNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGISN 609
Query: 181 SIGIIILLVYPIWAAVVIIF 200
SIGII+LLVYPIWA VVI+F
Sbjct: 610 SIGIILLLVYPIWALVVILF 669
>TC225660 similar to UP|Q84LB4 (Q84LB4) Cold acclimation protein COR413-PM1,
partial (74%)
Length = 956
Score = 314 bits (804), Expect = 2e-86
Identities = 159/200 (79%), Positives = 172/200 (85%)
Frame = +3
Query: 1 MWKGMNFREAEAADLINSDFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIAAIYLL 60
MWK F E EA LINSDFRDLSLA G GFGASFFG AAIAAIYLL
Sbjct: 228 MWKRRGFEE-EAVQLINSDFRDLSLA-------------GIGFGASFFGFFAAIAAIYLL 365
Query: 61 VLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLE 120
+LDRTNWKTNILT LLIPYIFFSLPS+IF+VFRGE+GKWIA VA+VLR+FIP+HFPDWLE
Sbjct: 366 ILDRTNWKTNILTALLIPYIFFSLPSLIFDVFRGELGKWIAAVAVVLRLFIPRHFPDWLE 545
Query: 121 LPAALIILIVVAPGLIANTFRDNIVGVVVCLVIACYLLQEHIRASGGFRNSFTKANGVSN 180
LP ALI+LIVVAP LIA+TFRDNIVGVVVCL+IACYLLQEHIRASGGFRNSFTKA+GVSN
Sbjct: 546 LPGALILLIVVAPSLIASTFRDNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGVSN 725
Query: 181 SIGIIILLVYPIWAAVVIIF 200
SIGII+LLVYPIWA VVI+F
Sbjct: 726 SIGIILLLVYPIWALVVILF 785
>TC225659 similar to UP|Q9FUW4 (Q9FUW4) Cold acclimation protein WCOR413-like
protein, partial (48%)
Length = 619
Score = 219 bits (558), Expect = 7e-58
Identities = 121/193 (62%), Positives = 131/193 (67%)
Frame = +2
Query: 1 MWKGMNFREAEAADLINSDFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIAAIYLL 60
MWK F E EA LINSDFRDLSLA G GFGASFFG AAIAA+
Sbjct: 191 MWKRRGFEE-EAVQLINSDFRDLSLA-------------GIGFGASFFGFFAAIAAM--- 319
Query: 61 VLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLE 120
GE+GKWIA VA+VLR+FIP+HFPDWLE
Sbjct: 320 ---------------------------------GELGKWIAAVAVVLRLFIPRHFPDWLE 400
Query: 121 LPAALIILIVVAPGLIANTFRDNIVGVVVCLVIACYLLQEHIRASGGFRNSFTKANGVSN 180
LP ALI+LIVVAP LIA+TFRDNIVGVVVCL+IACYLLQEHIRASGGFRNSFTKA+GVSN
Sbjct: 401 LPGALILLIVVAPSLIASTFRDNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGVSN 580
Query: 181 SIGIIILLVYPIW 193
SIGII+LLVYPIW
Sbjct: 581 SIGIILLLVYPIW 619
>BF324465 similar to GP|11127595|db cold acclimation protein homolog
{Arabidopsis thaliana}, partial (63%)
Length = 416
Score = 139 bits (349), Expect(2) = 1e-55
Identities = 70/85 (82%), Positives = 76/85 (89%)
Frame = +1
Query: 9 EAEAADLINSDFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIAAIYLLVLDRTNWK 68
E EA LINSDFRDLSLAA +LA+HA+ LG G GFGASFFGL AAIAAIYLL+LDRTNWK
Sbjct: 16 EEEAVQLINSDFRDLSLAANRLAHHAIKLG-GIGFGASFFGLFAAIAAIYLLILDRTNWK 192
Query: 69 TNILTGLLIPYIFFSLPSIIFNVFR 93
TNILT LLIPYIFFSLPS+IF+VFR
Sbjct: 193TNILTALLIPYIFFSLPSLIFDVFR 267
Score = 94.7 bits (234), Expect(2) = 1e-55
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 117 DWLELPAALIILIVVAPGLIANTFRDNIVGVVVCLVIACYLLQEHIRASG 166
DWLELP ALI+LIVVAP LIA+TFRDNIVGVVVCL+IACYLLQEHIRASG
Sbjct: 266 DWLELPGALILLIVVAPSLIASTFRDNIVGVVVCLIIACYLLQEHIRASG 415
>BU549097 similar to GP|10121845|gb cold acclimation protein WCOR413-like
protein {Oryza sativa} [Oryza sativa (japonica
cultivar-group), partial (52%)
Length = 666
Score = 150 bits (379), Expect(2) = 2e-54
Identities = 72/84 (85%), Positives = 79/84 (93%)
Frame = -1
Query: 117 DWLELPAALIILIVVAPGLIANTFRDNIVGVVVCLVIACYLLQEHIRASGGFRNSFTKAN 176
DWLELP ALI+ VVAP LIA+TFRDNIVGVVVCL+IACYLLQEHIRASGGFRNSFTKA+
Sbjct: 525 DWLELPGALILXXVVAPSLIASTFRDNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAH 346
Query: 177 GVSNSIGIIILLVYPIWAAVVIIF 200
G+SNSIGII+LLVYPIWA VVI+F
Sbjct: 345 GISNSIGIILLLVYPIWALVVILF 274
Score = 79.3 bits (194), Expect(2) = 2e-54
Identities = 38/47 (80%), Positives = 41/47 (86%)
Frame = -3
Query: 47 FFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFR 93
FFGL AAIAAI LL+LDRTNWKTN LT LLIPYIFFSLPS+ +VFR
Sbjct: 664 FFGLFAAIAAIXLLILDRTNWKTNXLTALLIPYIFFSLPSLXXDVFR 524
>TC225658 similar to UP|Q9SVL6 (Q9SVL6) Cold acclimation protein WCOR413-like
protein beta form, partial (51%)
Length = 857
Score = 160 bits (405), Expect = 4e-40
Identities = 91/157 (57%), Positives = 104/157 (65%), Gaps = 33/157 (21%)
Frame = +2
Query: 55 AAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFR---------GEIGKWIALVAI 105
A YLL+LDRTNWKTNILT LLIPYIFFSLPS+IF+VFR + +++ I
Sbjct: 200 AKSYLLILDRTNWKTNILTALLIPYIFFSLPSLIFDVFRRLACHALLLSILHHHFSVIVI 379
Query: 106 VLRIFI------------------------PKHFPDWLELPAALIILIVVAPGLIANTFR 141
L I I + DWLELP ALI+L+VVAP LIA+TFR
Sbjct: 380 FLFIIILLMQGRAWKMDCCSCCCITTFHS*TLPWYDWLELPGALILLMVVAPSLIASTFR 559
Query: 142 DNIVGVVVCLVIACYLLQEHIRASGGFRNSFTKANGV 178
DNIVGVVVCL+IACYLLQ HIRASGGFRNSFTKA+GV
Sbjct: 560 DNIVGVVVCLIIACYLLQVHIRASGGFRNSFTKAHGV 670
Score = 94.4 bits (233), Expect = 3e-20
Identities = 84/261 (32%), Positives = 111/261 (42%), Gaps = 61/261 (23%)
Frame = +3
Query: 1 MWKGMNFREAEAADLINSDFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIAAIYLL 60
MWK F E EA LINSDFRDLSLA G GFGASFFG AAIAA++ +
Sbjct: 9 MWKRRGFEE-EAVQLINSDFRDLSLA-------------GIGFGASFFGFFAAIAAMWTM 146
Query: 61 ----VLDRTNWKTNILTGLLI----------------PYIFFSLPS-------------- 86
+D+ + IL L + Y F + S
Sbjct: 147 KSIWSVDKVHSTGKILLKLRVIC*FWIVQTGRQIFSQHYSFHTFSSACLH*FSTSSGD*L 326
Query: 87 ---------------------IIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLELPAAL 125
+ F + RGE+GKWIA VA+VLR+FIP+HFP + +
Sbjct: 327 VTLYCYQFCTIIFL***FSFLLSFYLCRGELGKWIAAVAVVLRLFIPRHFPGMIGWNCQV 506
Query: 126 I------ILIVVAPGLIANTFRDNIVGVVVCLVIACYLLQEHIRASGGFRNSFTKANGVS 179
+ L++ L+ T + + Y + + K +S
Sbjct: 507 L*FF*WS*LLL*LQALLETTLLGWWCA*SLHAICCKYTFGLLVVS----ETPSLKLTALS 674
Query: 180 NSIGIIILLVYPIWAAVVIIF 200
NSIGII+LLVYPIWA VVI+F
Sbjct: 675 NSIGIILLLVYPIWALVVILF 737
>AW309433 weakly similar to PIR|G85439|G854 cold acclimation protein homolog
[imported] - Arabidopsis thaliana, partial (18%)
Length = 264
Score = 94.7 bits (234), Expect = 2e-20
Identities = 49/88 (55%), Positives = 58/88 (65%)
Frame = -1
Query: 98 KWIALVAIVLRIFIPKHFPDWLELPAALIILIVVAPGLIANTFRDNIVGVVVCLVIACYL 157
KWI V + + D L L +I +IV A L+ +TFRDN V VVVC +IACYL
Sbjct: 264 KWIRAVLFASCLSLHTLLLDRLALDGDIIFVIVAASSLLVSTFRDNTVRVVVCFIIACYL 85
Query: 158 LQEHIRASGGFRNSFTKANGVSNSIGII 185
LQ HI SGGFRNSFTKA+G+ NSIGII
Sbjct: 84 LQPHIXVSGGFRNSFTKASGILNSIGII 1
>TC229252
Length = 840
Score = 51.2 bits (121), Expect = 3e-07
Identities = 39/139 (28%), Positives = 72/139 (51%)
Frame = +3
Query: 51 IAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIALVAIVLRIF 110
I+ I+++ +L+L R T + ++P P+ + + +G G W A +A+++R+F
Sbjct: 282 ISTISSV-VLILARG---TAVPKSYIVPLFALQAPAGVVSWIKGRYGVWTAFLALLIRLF 449
Query: 111 IPKHFPDWLELPAALIILIVVAPGLIANTFRDNIVGVVVCLVIACYLLQEHIRASGGFRN 170
+ P LELP ++L++VAP A R G V+ L+I+ YL +H + +
Sbjct: 450 F--YIPGELELPFLALLLLMVAP-YEAMKLRYTKEGAVISLLISVYLAFQHFSRT-SLQQ 617
Query: 171 SFTKANGVSNSIGIIILLV 189
SF + + V+ I I +V
Sbjct: 618 SFDQGSIVATLAVICITVV 674
>TC225661 homologue to UP|Q84LB4 (Q84LB4) Cold acclimation protein
COR413-PM1, partial (8%)
Length = 736
Score = 48.5 bits (114), Expect = 2e-06
Identities = 28/52 (53%), Positives = 31/52 (58%)
Frame = +1
Query: 9 EAEAADLINSDFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIAAIYLL 60
E EA LINSDFRDLSLA G GFGAS FG AAIAA++ +
Sbjct: 76 EEEAVQLINSDFRDLSLA-------------GIGFGASIFGFFAAIAAMWTM 192
Score = 37.0 bits (84), Expect = 0.006
Identities = 15/16 (93%), Positives = 16/16 (99%)
Frame = +2
Query: 58 YLLVLDRTNWKTNILT 73
YLL+LDRTNWKTNILT
Sbjct: 689 YLLILDRTNWKTNILT 736
>TC221720 homologue to UP|Q8LLD9 (Q8LLD9) BEL1-related homeotic protein 29
(Fragment), partial (4%)
Length = 911
Score = 30.0 bits (66), Expect = 0.74
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 100 IALVAIVLRIFIPKHFPDWLELPAALIILIVVAPGLIAN 138
+AL A+V+ + + +HFP W L ++II+I+ LI+N
Sbjct: 383 LALKAMVVVVVVLEHFPIWKTLEGSIIIIIM---SLISN 490
>BQ743071 similar to PIR|T51575|T51 2-hydroxyphytanoyl-CoA lyase-like protein
- Arabidopsis thaliana, partial (18%)
Length = 421
Score = 28.9 bits (63), Expect = 1.7
Identities = 17/51 (33%), Positives = 25/51 (48%), Gaps = 9/51 (17%)
Frame = +2
Query: 20 FRDLSLAATKLANHAVNLGVGF---------GFGASFFGLIAAIAAIYLLV 61
F + + T LAN AV+LGV F G+ AS +G + ++L V
Sbjct: 107 FGVVGIPVTSLANRAVSLGVRFIAFHNEQSAGYAASAYGYLTGRPGVFLTV 259
>CD396188 weakly similar to GP|6175788|gb|A ORF144 {Xestia c-nigrum
granulovirus}, partial (5%)
Length = 701
Score = 28.9 bits (63), Expect = 1.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 38 GVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLLIPYIFFSLPSIIFNV 91
G+G GF SF ++ ++ LV D W GLL I+F V
Sbjct: 195 GMGKGFQCSFSPMVLKYVFVFYLVCDLLGWALLFFVGLLFVGYILVF*GILFPV 34
>TC227352 similar to UP|Q9LVJ1 (Q9LVJ1) Cucumisin-like serine protease;
subtilisin-like protease (At3g14067), partial (20%)
Length = 1906
Score = 28.5 bits (62), Expect = 2.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 65 TNWKTNILTGLLIPYIFFSLPSIIFNVF----RGEIGKW 99
T W++ +L G+++ + FSL S++ VF G +G W
Sbjct: 297 TMWRSCVLLGMMLIRLRFSLESLLLKVFVKGKWGGLGSW 413
>BM092753
Length = 420
Score = 27.7 bits (60), Expect = 3.7
Identities = 21/89 (23%), Positives = 36/89 (39%)
Frame = +2
Query: 74 GLLIPYIFFSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLELPAALIILIVVAP 133
GLLIP++FF P +P H W+ +P A+ L++
Sbjct: 50 GLLIPFLFFPSPH-----------------------RLPLH---WINIPPAVSSLLISFS 151
Query: 134 GLIANTFRDNIVGVVVCLVIACYLLQEHI 162
L A +F +I + ++ A +L H+
Sbjct: 152 FLFAFSFLSSIFASISPILFASFLA*NHL 238
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 27.3 bits (59), Expect = 4.8
Identities = 25/97 (25%), Positives = 40/97 (40%), Gaps = 8/97 (8%)
Frame = -3
Query: 67 WKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKHFPDWLELPAALI 126
W +L ++IP+IF SIIF + I LV I + I P + +I
Sbjct: 536 WLWRLLIFIIIPFIFIIFISIIFIII-------IVLVIIPIVIITPTS-----TVGLRII 393
Query: 127 ILIVVAPGLIANTFRD--------NIVGVVVCLVIAC 155
I I P +I +I+ +V+ ++I C
Sbjct: 392 IRISFFPAIITREILVFFVIIVVLSIIHIVIIIIILC 282
>TC218197 weakly similar to GB|AAC19269.1|3193285|T14P8 coded for by A.
thaliana cDNA N65001; coded for by A. thaliana cDNA
R64991 {Arabidopsis thaliana;} , partial (74%)
Length = 1021
Score = 27.3 bits (59), Expect = 4.8
Identities = 16/35 (45%), Positives = 20/35 (56%), Gaps = 2/35 (5%)
Frame = -1
Query: 54 IAAIYLL--VLDRTNWKTNILTGLLIPYIFFSLPS 86
IA IY + V DR N T +L LIP ++ LPS
Sbjct: 775 IAFIYFVW*VQDRNNALTQVLINYLIPINYYFLPS 671
>TC227722
Length = 676
Score = 27.3 bits (59), Expect = 4.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 30 LANHAVNLGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNI 71
L + NLGV +G G++ + LL+L +TNWK +
Sbjct: 289 LLGYEANLGVEGLWGGMICGIVIQ-TLLLLLILYKTNWKKEV 411
>TC209660 homologue to GB|AAP47431.1|32331807|AY164857 RTNLB9w {Glycine max;}
, complete
Length = 1182
Score = 26.9 bits (58), Expect = 6.3
Identities = 24/107 (22%), Positives = 45/107 (41%)
Frame = +1
Query: 2 WKGMNFREAEAADLINSDFRDLSLAATKLANHAVNLGVGFGFGASFFGLIAAIAAIYLLV 61
WKG + L S F DL+ K N + + + G + I ++Y+L
Sbjct: 730 WKGPQIPDIV---LKESFFHDLASILHKRFNQLLPMLLRISCGIDLPIFLLNIVSLYILS 900
Query: 62 LDRTNWKTNILTGLLIPYIFFSLPSIIFNVFRGEIGKWIALVAIVLR 108
+ + + + + L I ++ I++ + EI W+ V IVL+
Sbjct: 901 VIGSYF--SFVNLLYIGFLCMQTLPIVYERYEEEINNWVGDVIIVLK 1035
>TC210567
Length = 545
Score = 26.6 bits (57), Expect = 8.2
Identities = 15/42 (35%), Positives = 21/42 (49%)
Frame = +2
Query: 35 VNLGVGFGFGASFFGLIAAIAAIYLLVLDRTNWKTNILTGLL 76
VNL GF F S++ + A + + TN TN+LT L
Sbjct: 59 VNLFRGFKFSLSWWAYTFPMTAAAIATITYTNQVTNVLTQAL 184
>TC213126 weakly similar to UP|Q94A79 (Q94A79) AT3g49250/F2K15_110, partial
(11%)
Length = 465
Score = 26.6 bits (57), Expect = 8.2
Identities = 13/34 (38%), Positives = 17/34 (49%)
Frame = -3
Query: 81 FFSLPSIIFNVFRGEIGKWIALVAIVLRIFIPKH 114
F SL + G +G+WIALVA + P H
Sbjct: 334 FLSLTYVDHLPVSGSVGRWIALVAFLHFAHFPLH 233
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.331 0.147 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,253,212
Number of Sequences: 63676
Number of extensions: 128258
Number of successful extensions: 932
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of query: 200
length of database: 12,639,632
effective HSP length: 92
effective length of query: 108
effective length of database: 6,781,440
effective search space: 732395520
effective search space used: 732395520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0091b.8