BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0087.18
(433 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC228109 weakly similar to UP|Q9FF12 (Q9FF12) Dimethylaniline mo... 231 5e-61
BU082229 similar to GP|9757850|dbj dimethylaniline monooxygenase... 211 4e-55
TC234910 weakly similar to UP|Q9FF12 (Q9FF12) Dimethylaniline mo... 89 2e-33
BM095137 132 2e-31
TC211333 similar to UP|Q9SXE0 (Q9SXE0) T3P18.13, partial (18%) 116 2e-26
TC212801 79 5e-15
TC206674 similar to UP|FMO3_HUMAN (P31513) Dimethylaniline monoo... 71 8e-13
TC230122 67 2e-11
BF070101 similar to GP|9759603|dbj| dimethylaniline monooxygenas... 42 2e-07
AW102355 homologue to GP|10176714|dbj dimethylaniline monooxygen... 47 2e-05
TC206675 47 2e-05
CA818897 similar to GP|16555354|gb flavin-containing monooxygena... 40 0.003
TC209376 UP|Q9SLW5 (Q9SLW5) Protoporphyrinogen IX oxidase, complete 37 0.023
TC210820 34 0.11
TC226131 similar to UP|Q9SHX4 (Q9SHX4) F1E22.18, partial (86%) 34 0.15
TC228946 33 0.19
TC228947 33 0.19
BM085313 similar to GP|10177621|db phytoene dehydrogenase-like {... 33 0.33
AI443115 similar to GP|10177621|db phytoene dehydrogenase-like {... 33 0.33
TC226976 similar to UP|Q8S9L4 (Q8S9L4) At2g43020/MFL8.12, partia... 32 0.56
>TC228109 weakly similar to UP|Q9FF12 (Q9FF12) Dimethylaniline
monooxygenase-like protein, partial (33%)
Length = 855
Score = 231 bits (589), Expect = 5e-61
Identities = 106/152 (69%), Positives = 127/152 (82%), Gaps = 2/152 (1%)
Frame = +3
Query: 278 IEDNRVGPLYEHTFPPSLAPSLSFMGIPSKVLGPHFFESQAKWIAQLLSGKKILPSFEEM 337
++DNRVGPLYEHTFPP+LAPSLS +GIP ++LG FFESQ KW+AQLLSGKK LPS+EEM
Sbjct: 297 VDDNRVGPLYEHTFPPALAPSLSLVGIPRRILGLPFFESQGKWVAQLLSGKKALPSYEEM 476
Query: 338 MKSIKELYHSREVANVPKRYTHSIADNDGFEYFDKYGDNAGFPKLEEWRKEICISSTVNM 397
MKSIKE YHS+E A +PK YTH I +GF+Y DKY +N G PKL+EWRK++C+S+ VN+
Sbjct: 477 MKSIKEFYHSKEEAGIPKHYTHEI---EGFDYCDKYAENVGLPKLQEWRKDLCVSAVVNL 647
Query: 398 FANLETFRDSWND--DEMLQEVLKIPYFTQLG 427
F NLET+RDSWND DE LQE L+ PYFTQLG
Sbjct: 648 FINLETYRDSWNDDIDEKLQEALRSPYFTQLG 743
>BU082229 similar to GP|9757850|dbj dimethylaniline monooxygenase
(N-oxide-forming)-like protein {Arabidopsis thaliana},
partial (22%)
Length = 423
Score = 211 bits (538), Expect = 4e-55
Identities = 104/143 (72%), Positives = 122/143 (84%)
Frame = +2
Query: 122 LREVIRFNTRVEYVGPLNYNGAFSGNDDLKWVVRSKEKESDGVVEEVFDAVVVASGHYSH 181
LR++I+FNT+V YVGPLNY ++DLKWVVRSK+K S+ VE+VFDAVVVA+GHYS+
Sbjct: 2 LRDMIKFNTKVHYVGPLNYGVP---SEDLKWVVRSKDKNSEEEVEQVFDAVVVATGHYSN 172
Query: 182 PKLPCIQGMDTWKRKQMHSHIYRTPQPFGKEIVVVVGNSFSGQEISMDLVKVAKEVHLSS 241
P+LPCIQGM WKRKQMHSHIYR+P+PF EIVVVVGNSFSGQEISM+LVKV KE+HLSS
Sbjct: 173 PRLPCIQGMAIWKRKQMHSHIYRSPEPFRGEIVVVVGNSFSGQEISMELVKVVKELHLSS 352
Query: 242 NSAYISEGLSKVIHKYQNFHLHP 264
S I EGLSKVI K++NFHL P
Sbjct: 353 KSLDIYEGLSKVISKHENFHLRP 421
>TC234910 weakly similar to UP|Q9FF12 (Q9FF12) Dimethylaniline
monooxygenase-like protein, partial (8%)
Length = 443
Score = 88.6 bits (218), Expect(2) = 2e-33
Identities = 40/58 (68%), Positives = 48/58 (81%)
Frame = -2
Query: 324 LLSGKKILPSFEEMMKSIKELYHSREVANVPKRYTHSIADNDGFEYFDKYGDNAGFPK 381
LLSGKK+LPS+EEMM+SI+E YHS EVA +PKRYTH + D F+Y DKYG+N GFPK
Sbjct: 442 LLSGKKVLPSYEEMMESIEEFYHSNEVAGIPKRYTHVV---DAFDYCDKYGENVGFPK 278
Score = 72.0 bits (175), Expect(2) = 2e-33
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Frame = -1
Query: 384 EWRKEICISSTVNMFANLETFRDSWND--DEMLQEVLKIPYFTQL 426
EWRKE+CIS+ +N FANLET+RDSWND DE LQE L+ PYFTQL
Sbjct: 269 EWRKELCISAGMNAFANLETYRDSWNDDIDEKLQEALRSPYFTQL 135
>BM095137
Length = 428
Score = 132 bits (333), Expect = 2e-31
Identities = 73/152 (48%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Frame = +3
Query: 58 DPLGKNPVLK-VHSSIYESLRLMSPREIMGFTDFPFLVKKGRDMRRFPGHRELLFYLNDF 116
DPLG +P + VHSS+Y SLR PR++MGF+DFPF+ + D R FPGH E+L +L F
Sbjct: 3 DPLGLDPTRETVHSSLYLSLRTNLPRQLMGFSDFPFVKNESGDPRTFPGHEEVLRFLEGF 182
Query: 117 CEWFGLREVIRFNTRVEYVGPLNYNGAFSGNDDLKWVVRSK-EKESDGVVEEVFDAVVVA 175
FG+ E+ +F T V V GN+ WVV S+ ++ D V E FDAVVV
Sbjct: 183 AGEFGINELTQFETEVVRV-------ERKGNE---WVVESRTSRDGDSVSREGFDAVVVC 332
Query: 176 SGHYSHPKLPCIQGMDTWKRKQMHSHIYRTPQ 207
SGH+ PKL + G+DTW+ QMHSH YR PQ
Sbjct: 333 SGHFVEPKLAEVPGIDTWRGFQMHSHNYRVPQ 428
>TC211333 similar to UP|Q9SXE0 (Q9SXE0) T3P18.13, partial (18%)
Length = 828
Score = 116 bits (290), Expect = 2e-26
Identities = 58/133 (43%), Positives = 81/133 (60%)
Frame = +3
Query: 278 IEDNRVGPLYEHTFPPSLAPSLSFMGIPSKVLGPHFFESQAKWIAQLLSGKKILPSFEEM 337
++DNRVGPLY+H FPP+L+P LSF+G+ K E Q KW+A++LSGK +LP+ +EM
Sbjct: 237 VDDNRVGPLYKHVFPPALSPWLSFIGLTFKNSVYQIIELQCKWVAKVLSGKVLLPTEKEM 416
Query: 338 MKSIKELYHSREVANVPKRYTHSIADNDGFEYFDKYGDNAGFPKLEEWRKEICISSTVNM 397
M+S+KE Y E +PKRYTHS+ +Y G P LEEW++ + N
Sbjct: 417 MESVKEYYQLMEENGLPKRYTHSLYPLQA-DYKHWLVAEIGLPPLEEWKENMLKQCFKNF 593
Query: 398 FANLETFRDSWND 410
E +RD W+D
Sbjct: 594 VEMNEKYRDEWDD 632
>TC212801
Length = 428
Score = 78.6 bits (192), Expect = 5e-15
Identities = 37/97 (38%), Positives = 60/97 (61%)
Frame = +1
Query: 318 AKWIAQLLSGKKILPSFEEMMKSIKELYHSREVANVPKRYTHSIADNDGFEYFDKYGDNA 377
A+ IA +LS + LPS EEM K + Y S E + PKRYTH++ ++Y + D
Sbjct: 1 ARGIAGILSNRIALPSKEEMAKDVDAFYSSLEASGTPKRYTHNMGILQ-WDYNNWIADQC 177
Query: 378 GFPKLEEWRKEICISSTVNMFANLETFRDSWNDDEML 414
G P +EEWR+++ I+++ N E++RD W+DD+++
Sbjct: 178 GVPSIEEWRRQMYIATSKNRVLRPESYRDEWDDDDLV 288
>TC206674 similar to UP|FMO3_HUMAN (P31513) Dimethylaniline monooxygenase
[N-oxide-forming] 3 (Hepatic flavin-containing
monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3)
(FMO form 2) (FMO II) , partial (4%)
Length = 1470
Score = 71.2 bits (173), Expect = 8e-13
Identities = 54/226 (23%), Positives = 97/226 (42%)
Frame = +3
Query: 5 TNQNSKNVCVIGAGPSGLVATRELKREGHKVVVFEQNHDIGGQWLYNPNVQCEDPLGKNP 64
T Q + V +IGAG SG+ L ++ ++ E+ W
Sbjct: 33 TMQEATKVIIIGAGTSGIATAGCLTKQSIPYIMLEREDCFASLW---------------- 164
Query: 65 VLKVHSSIYESLRLMSPREIMGFTDFPFLVKKGRDMRRFPGHRELLFYLNDFCEWFGLRE 124
Y+ L L +++ PF + + ++ + YL ++ F ++
Sbjct: 165 ----QKYTYDRLHLHLRKQVCELPHLPF----PKSYPHYVPRKQFIDYLGNYVNHFEIKP 320
Query: 125 VIRFNTRVEYVGPLNYNGAFSGNDDLKWVVRSKEKESDGVVEEVFDAVVVASGHYSHPKL 184
+ + VE V + G W V+++ + S + E +VVASG + P+L
Sbjct: 321 L--YQRAVELVEYDGWKGI--------WRVKAQNRRSGELEEYAGKYLVVASGETAEPRL 470
Query: 185 PCIQGMDTWKRKQMHSHIYRTPQPFGKEIVVVVGNSFSGQEISMDL 230
P IQG++++ K +HS Y+ F + V+VVG+ SG EI++DL
Sbjct: 471 PQIQGLESFNGKVIHSTAYKNGNEFKNKHVLVVGSGNSGMEIALDL 608
>TC230122
Length = 779
Score = 66.6 bits (161), Expect = 2e-11
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Frame = +3
Query: 10 KNVCVIGAGPSGLVATRELKREGHKVVVFEQNHDIGGQWLYNPNVQCEDPLGKNPVLKVH 69
+ V +IGAG SGLVA + + G +VFE + +GG W +
Sbjct: 141 RRVVIIGAGISGLVACKYVIEFGFNPIVFEVDDGVGGLWRHT------------------ 266
Query: 70 SSIYESLRLMSPREIMGFTDFPFLVKKGRDMRRFPGHRELLFYLNDFCEWFGLREVIRFN 129
ES +L + +++ F DFP+ D P H+++L Y+N + E F L IRFN
Sbjct: 267 ---MESTKLQNNKQMFQFMDFPWPPSVKEDN---PSHKQVLDYVNSYAEHFSLIPYIRFN 428
Query: 130 TRV---EYVG-----PLNYNGAFSGN-----DDLKWVVRSKEKESDGVVEEVFDAVVVAS 176
++V +YVG + + GN W + + ++ + + VV+
Sbjct: 429 SKVIDIDYVGGESSEEMKSWELWGGNGRPFCSKGTWHIAVQHTKNLSIEVHEAEFVVLCI 608
Query: 177 GHYSH----PKLPCIQGMDTWKRKQMHSHIY 203
G YS P+ P +G + + K MHS Y
Sbjct: 609 GKYSGFPNIPEFPPGKGPEVFNGKVMHSMDY 701
>BF070101 similar to GP|9759603|dbj| dimethylaniline monooxygenase
(N-oxide-forming)-like protein {Arabidopsis thaliana},
partial (9%)
Length = 382
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 74 ESLRLMSPREIMGFTDF--PFLVKKGRDMRRFPGHRELLFYLNDFCEWFGLREVIRFNTR 131
ES +L + +++ F DF P VK+ P H ++L YLN + E F L IRFN++
Sbjct: 194 ESTKLQNKKQMYQFLDFAWPSSVKEDN-----PSHEQVLDYLNSYAEHFSLIPYIRFNSK 358
Query: 132 V---EYVG 136
V +YVG
Sbjct: 359 VIDIDYVG 382
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 10 KNVCVIGAGPSGLVATRELKREGHKVVVFE 39
+ V +IGAG SGLVA + L G +VFE
Sbjct: 64 RRVAIIGAGTSGLVACKYLLEFGFNPIVFE 153
>AW102355 homologue to GP|10176714|dbj dimethylaniline monooxygenase-like
protein {Arabidopsis thaliana}, partial (5%)
Length = 352
Score = 47.0 bits (110), Expect = 2e-05
Identities = 19/28 (67%), Positives = 25/28 (88%)
Frame = +3
Query: 400 NLETFRDSWNDDEMLQEVLKIPYFTQLG 427
NLET+RDSW+D E+L+E L+ P+FTQLG
Sbjct: 3 NLETYRDSWDDHELLKEALQSPHFTQLG 86
>TC206675
Length = 957
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/59 (37%), Positives = 40/59 (67%)
Frame = +2
Query: 172 VVVASGHYSHPKLPCIQGMDTWKRKQMHSHIYRTPQPFGKEIVVVVGNSFSGQEISMDL 230
+V+ASG + P++P I+G++++ K +HS Y + F ++V+VV + SG EI++DL
Sbjct: 188 LVLASGETAEPRVPQIEGLESFNGKVIHSTGYNNGKEFKDKLVLVV*SGNSGMEIALDL 364
>CA818897 similar to GP|16555354|gb flavin-containing monooxygenase YUCCA2
{Arabidopsis thaliana}, partial (26%)
Length = 445
Score = 39.7 bits (91), Expect = 0.003
Identities = 23/80 (28%), Positives = 45/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 152 WVVRSKEK-ESDGVVEEVFDAVVVASGHYSHPKLPCIQGMDTWKRKQMHSHIYRTPQPFG 210
W V+++ + + E V ++VA+G + +P I+GM ++ + +H+ Y++ F
Sbjct: 88 WRVKTRGVIKKEDTAEYVCQWLIVATGECAEEVVPQIEGMGEFEGQIVHTSKYKSGSMFC 267
Query: 211 KEIVVVVGNSFSGQEISMDL 230
+ V+VVG SG E+ +DL
Sbjct: 268 GKNVLVVGCGNSGMEVCLDL 327
>TC209376 UP|Q9SLW5 (Q9SLW5) Protoporphyrinogen IX oxidase, complete
Length = 1733
Score = 36.6 bits (83), Expect = 0.023
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +3
Query: 10 KNVCVIGAGPSGLVATRELKREGHKVVVFEQNHDIGGQ 47
K V V+GAG SGL A +LK G V VFE GG+
Sbjct: 63 KRVAVVGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGR 176
>TC210820
Length = 801
Score = 34.3 bits (77), Expect = 0.11
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 285 PLYEHTFPPSLAPSLSFMGIPSKVLGPHFFESQAKWIAQLLSGKKILPSFEEMMKSIK 342
PLY P + P L+ +G + E ++ W+ L G LPS EM K +K
Sbjct: 367 PLYRQVIHPRI-PQLAMVGYAEGISNIFASEMKSMWLVHFLDGNIGLPSIREMEKDVK 537
>TC226131 similar to UP|Q9SHX4 (Q9SHX4) F1E22.18, partial (86%)
Length = 2250
Score = 33.9 bits (76), Expect = 0.15
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 11 NVCVIGAGPSGLVATRELKREGHKVVVFEQNHDIGGQ 47
+V VIGAG SGL A R L KV V E +GG+
Sbjct: 167 SVIVIGAGISGLAAARSLYDASFKVTVLESRDRLGGR 277
>TC228946
Length = 601
Score = 33.5 bits (75), Expect = 0.19
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 285 PLYEHTFPPSLAPSLSFMGIPSKVLGPHFFESQAKWIAQLLSGKKILPSFEEMMKSIK 342
PLY P + P L+ +G E ++ W++ L G LPS EM K +K
Sbjct: 334 PLYRQIIHPQI-PQLAIIGYAESPSNIFASEMKSLWLSHFLDGNIELPSIREMEKDVK 504
>TC228947
Length = 1019
Score = 33.5 bits (75), Expect = 0.19
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 285 PLYEHTFPPSLAPSLSFMGIPSKVLGPHFFESQAKWIAQLLSGKKILPSFEEMMKSIK 342
PLY P + P L+ +G E ++ W+A L G LPS EM K +K
Sbjct: 559 PLYRQIIHPRI-PQLAIIGYAEGPSNIFASEMKSLWLAHFLDGNIELPSIREMEKDVK 729
>BM085313 similar to GP|10177621|db phytoene dehydrogenase-like {Arabidopsis
thaliana}, partial (19%)
Length = 426
Score = 32.7 bits (73), Expect = 0.33
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 14 VIGAGPSGLVATRELKREGHKVVVFEQNHDIGG 46
+IG G +GL A L R G V V E+ H IGG
Sbjct: 73 IIGGGHNGLTAAAYLARGGLSVAVLERRHVIGG 171
>AI443115 similar to GP|10177621|db phytoene dehydrogenase-like
{Arabidopsis thaliana}, partial (20%)
Length = 421
Score = 32.7 bits (73), Expect = 0.33
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 14 VIGAGPSGLVATRELKREGHKVVVFEQNHDIGG 46
VIG G +GL A L R G V + E+ H IGG
Sbjct: 32 VIGGGHNGLTAAAYLARGGLSVAILERRHVIGG 130
>TC226976 similar to UP|Q8S9L4 (Q8S9L4) At2g43020/MFL8.12, partial (92%)
Length = 2336
Score = 32.0 bits (71), Expect = 0.56
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 4 KTNQNSKNVCVIGAGPSGLVATRELKREGHKVVVFEQNHDIGGQ 47
K + S +V VIG G +G+ A R L+ +V++ E GG+
Sbjct: 352 KQQERSPSVIVIGGGMAGIAAARALQDASFQVILLESRERPGGR 483
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,195,877
Number of Sequences: 63676
Number of extensions: 319404
Number of successful extensions: 1491
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of query: 433
length of database: 12,639,632
effective HSP length: 100
effective length of query: 333
effective length of database: 6,272,032
effective search space: 2088586656
effective search space used: 2088586656
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0087.18