BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0069.10
(641 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC208427 homologue to UP|Q9LDF6 (Q9LDF6) Clock-associated PAS pr... 446 e-125
AI960991 244 1e-64
TC209310 homologue to UP|Q9M648 (Q9M648) FKF1 (Adagio 3), partia... 235 4e-62
BF325141 229 4e-60
TC211642 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, part... 162 4e-40
TC232366 similar to UP|Q6UEI5 (Q6UEI5) ZEITLUPE, partial (18%) 142 5e-34
BE660680 similar to GP|14532556|gb| AT5g57360/MSF19_2 {Arabidops... 119 5e-30
AI966255 homologue to GP|28193646|gb| F-box protein ZEITLUPE {Br... 128 9e-30
TC212025 similar to UP|Q8H934 (Q8H934) Phototropin, partial (27%) 99 6e-21
TC234856 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, part... 92 9e-19
TC207695 weakly similar to UP|Q945N7 (Q945N7) AT5g04420/T32M21_2... 83 4e-16
TC233050 homologue to UP|Q41384 (Q41384) Protein kinase (Fragmen... 72 6e-13
TC204897 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, parti... 70 3e-12
BE556248 similar to GP|14495224|db P0682B08.13 {Oryza sativa (ja... 67 3e-11
BE660669 60 3e-09
TC204898 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, parti... 60 3e-09
BG839157 59 5e-09
TC213795 55 1e-07
TC204901 similar to GB|AAL15406.1|16323302|AY058232 At2g02710/T2... 46 6e-05
BU547384 44 2e-04
>TC208427 homologue to UP|Q9LDF6 (Q9LDF6) Clock-associated PAS protein ZTL
(FKF1-like protein 2) (LOV kelch protein 1) (Adagio 1)
(At5g57360/MSF19_2), partial (46%)
Length = 1228
Score = 446 bits (1148), Expect = e-125
Identities = 203/281 (72%), Positives = 240/281 (85%)
Frame = +3
Query: 359 LDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTW 418
L+S NPEW+ V V S PPGRWGHTLSC+NGS LVVFGGCGR+GLLNDVFVLDLDA+ PTW
Sbjct: 6 LNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFVLDLDAKPPTW 185
Query: 419 TEVCGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSW 478
E+ G APPLPRSWHSSCT++G+KL+VSGGC DSGVLLSDT+LLDL+ + P+WREIP +W
Sbjct: 186 REISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAW 365
Query: 479 SPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNEFSGL 538
+PPSRLGH+LSVYG KILMFGGLAKSG LR RS + +T+DL +E+P WR + + G
Sbjct: 366 TPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGA 545
Query: 539 ASQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 598
+ PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++EKP+WRILNVPG
Sbjct: 546 GNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGC 725
Query: 599 PPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 639
PP+FAWGHSTCVVGGTR +VLGG TGEEW+L+ELHEL LAS
Sbjct: 726 PPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLAS 848
Score = 110 bits (274), Expect = 3e-24
Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Frame = +3
Query: 312 SWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSV 371
+WR+ + P + S G +L++ GG ++DTF+L+L + P WR + V
Sbjct: 180 TWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPV 359
Query: 372 KSSPPGRWGHTLSCLNGSWLVVFGGCGRKGLL----NDVFVLDLDAQQPTWTEVC----- 422
+PP R GHTLS G +++FGG + G L +DVF +DL ++P W V
Sbjct: 360 AWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMP 539
Query: 423 -----GGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTS 477
GG P PR H + ++ G ++++ GG S Y+LD + P WR +
Sbjct: 540 GAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVP 719
Query: 478 WSPPS-RLGHSLSVYGRTKILMFGG 501
PP GHS V G T+ ++ GG
Sbjct: 720 GCPPRFAWGHSTCVVGGTRAIVLGG 794
Score = 90.9 bits (224), Expect = 2e-18
Identities = 56/159 (35%), Positives = 81/159 (50%)
Frame = +3
Query: 463 DLAKDNPIWREIPTSWSPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLED 522
+L NP W+ + S PP R GH+LS + +++FGG + G L + + +DL+
Sbjct: 3 ELNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLL----NDVFVLDLDA 170
Query: 523 EKPQWRQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLD 582
+ P WR E SGLA P PR H + ++ ++I+ GG S FLLD
Sbjct: 171 KPPTWR-----EISGLAP-----PLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLD 320
Query: 583 PSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 621
S EKP WR + V PP GH+ V GG ++L+ GG
Sbjct: 321 LSMEKPVWREIPVAWTPPS-RLGHTLSVYGGRKILMFGG 434
Score = 46.6 bits (109), Expect = 3e-05
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +3
Query: 519 DLEDEKPQWRQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQ 577
+L P+W+ + Q PP R H + +++FGG GL +
Sbjct: 3 ELNSSNPEWQHV----------QVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLN--D 146
Query: 578 LFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCL 637
+F+LD + P+WR ++ P +W HS+C + GT+++V GG +L++ L L
Sbjct: 147 VFVLDLDAKPPTWREISGLAPPLPRSW-HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDL 323
Query: 638 ASD 640
+ +
Sbjct: 324 SME 332
>AI960991
Length = 436
Score = 244 bits (622), Expect = 1e-64
Identities = 124/160 (77%), Positives = 135/160 (83%)
Frame = +3
Query: 11 EDEDELHNHNSTGKRLKCMRKMKKNEEQDQVVDDDDGVVVVAGEAEESELPLQPGLFFYP 70
+D++++ N TGKRLKCMR NEE++ E EESELPL+PG FFYP
Sbjct: 12 KDKEDVRN---TGKRLKCMR----NEEEEVY------------EEEESELPLKPGFFFYP 134
Query: 71 TTPTSFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDP 130
TTPTSFVV+DALEPDFPIIYVNKVFE STGYRADEALGRNCRFLQYRDPRAQRRHPLVDP
Sbjct: 135 TTPTSFVVSDALEPDFPIIYVNKVFEISTGYRADEALGRNCRFLQYRDPRAQRRHPLVDP 314
Query: 131 VVVAEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIH 170
VVV+EIRRCLEEG+EFQGELLNFRKDGTPLVNRLRLAPIH
Sbjct: 315 VVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLAPIH 434
>TC209310 homologue to UP|Q9M648 (Q9M648) FKF1 (Adagio 3), partial (16%)
Length = 655
Score = 235 bits (600), Expect = 4e-62
Identities = 109/119 (91%), Positives = 115/119 (96%)
Frame = +1
Query: 521 EDEKPQWRQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFL 580
EDE+PQWRQL+ + F+GLASQ+ VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFL
Sbjct: 1 EDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFL 180
Query: 581 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLAS 639
LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEW+LNELHELCLAS
Sbjct: 181 LDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLAS 357
Score = 50.1 bits (118), Expect = 3e-06
Identities = 25/81 (30%), Positives = 46/81 (55%), Gaps = 2/81 (2%)
Frame = +1
Query: 337 RLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVKSSPPG-RWGHTLSCLNGSWLVVFG 395
R+++FGG + + F+L+ + P WR ++V PP WGH+ + G+ ++V G
Sbjct: 121 RIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLG 300
Query: 396 G-CGRKGLLNDVFVLDLDAQQ 415
G G + +LN++ L L ++Q
Sbjct: 301 GHTGEEWILNELHELCLASRQ 363
Score = 46.6 bits (109), Expect = 3e-05
Identities = 32/119 (26%), Positives = 59/119 (48%), Gaps = 13/119 (10%)
Frame = +1
Query: 360 DSKNPEWRRVSVKSS----------PPGRWGHTLSCLNGSWLVVFGGCGRKGLLN--DVF 407
+ + P+WR++ + PP R H + +++FGG GL + +F
Sbjct: 1 EDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGG-SIAGLHSPSQLF 177
Query: 408 VLDLDAQQPTWTEV-CGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLA 465
+LD ++P+W + G PP HS+C + G++++V GG T +L++ + L LA
Sbjct: 178 LLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLA 354
Score = 44.3 bits (103), Expect = 2e-04
Identities = 24/76 (31%), Positives = 39/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 427 PLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSPPS-RLG 485
P PR H + ++ ++++ GG S +LLD +++ P WR + PP G
Sbjct: 76 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 255
Query: 486 HSLSVYGRTKILMFGG 501
HS V G T++L+ GG
Sbjct: 256 HSTCVVGGTRVLVLGG 303
>BF325141
Length = 405
Score = 229 bits (583), Expect = 4e-60
Identities = 109/124 (87%), Positives = 116/124 (92%)
Frame = +2
Query: 442 KLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSPPSRLGHSLSVYGRTKILMFGG 501
KLVVSGGCTD+GVLLSDTYLLDL DNP WREIPTSW+PPSRLGHSLSVYGRTKILMFGG
Sbjct: 2 KLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGG 181
Query: 502 LAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGR 561
LAKSGHLRLRSGEAYTIDLEDE+PQWRQL+ + F+GLASQ+ VPPPRLDHVAV MPCGR
Sbjct: 182 LAKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVXMPCGR 361
Query: 562 IIIF 565
IIIF
Sbjct: 362 IIIF 373
Score = 61.6 bits (148), Expect = 1e-09
Identities = 29/89 (32%), Positives = 52/89 (57%), Gaps = 4/89 (4%)
Frame = +2
Query: 337 RLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGG 396
+LV+ GG ++DT++L+L + NP WR + +PP R GH+LS + +++FGG
Sbjct: 2 KLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGG 181
Query: 397 CGRKGLL----NDVFVLDLDAQQPTWTEV 421
+ G L + + +DL+ +QP W ++
Sbjct: 182 LAKSGHLRLRSGEAYTIDLEDEQPQWRQL 268
Score = 59.7 bits (143), Expect = 4e-09
Identities = 40/123 (32%), Positives = 58/123 (46%), Gaps = 14/123 (11%)
Frame = +2
Query: 391 LVVFGGCGRKG-LLNDVFVLDLDAQQPTWTEVCGGAPPLPRSWHSSCTIEGSKLVVSGGC 449
LVV GGC G LL+D ++LDL PTW E+ P R HS +K+++ GG
Sbjct: 5 LVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGL 184
Query: 450 TDSGVL---LSDTYLLDLAKDNPIWREI----------PTSWSPPSRLGHSLSVYGRTKI 496
SG L + Y +DL + P WR++ ++ PP RL H +I
Sbjct: 185 AKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVXMPCGRI 364
Query: 497 LMF 499
++F
Sbjct: 365 IIF 373
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/102 (26%), Positives = 45/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 495 KILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNEFSGLASQNPDVPPPRLDHVA 554
K+++ GG +G L + Y +DL + P WR++ + PP RL H
Sbjct: 2 KLVVSGGCTDAGVLL---SDTYLLDLTTDNPTWREIPTSW----------APPSRLGHSL 142
Query: 555 VSMPCGRIIIFGGSIAGLH---SPSQLFLLDPSEEKPSWRIL 593
+I++FGG H + + +D +E+P WR L
Sbjct: 143 SVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQL 268
Score = 38.9 bits (89), Expect = 0.007
Identities = 20/61 (32%), Positives = 32/61 (51%)
Frame = +2
Query: 561 RIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLG 620
++++ GG S +LLD + + P+WR + PP GHS V G T++L+ G
Sbjct: 2 KLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPS-RLGHSLSVYGRTKILMFG 178
Query: 621 G 621
G
Sbjct: 179 G 181
>TC211642 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, partial (15%)
Length = 392
Score = 162 bits (410), Expect = 4e-40
Identities = 71/92 (77%), Positives = 86/92 (93%)
Frame = +2
Query: 550 LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC 609
LDHVAVS+P GRI+IFGGS+AGLHS SQL++LDP++EKP+WRILNVPG+PP+FAWGHSTC
Sbjct: 2 LDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTC 181
Query: 610 VVGGTRVLVLGGHTGEEWVLNELHELCLASDL 641
VVGGTR +V+GG TGEEW+L+ELHEL LAS +
Sbjct: 182 VVGGTRAIVMGGQTGEEWMLSELHELSLASSV 277
Score = 48.1 bits (113), Expect = 1e-05
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +2
Query: 335 GNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVKSSPPG-RWGHTLSCLNGSWLVV 393
G R+++FGG + + ++L+ + P WR ++V PP WGH+ + G+ +V
Sbjct: 29 GGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIV 208
Query: 394 FGG-CGRKGLLNDVFVLDL 411
GG G + +L+++ L L
Sbjct: 209 MGGQTGEEWMLSELHELSL 265
Score = 45.8 bits (107), Expect = 6e-05
Identities = 29/88 (32%), Positives = 47/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 381 HTLSCLNGSWLVVFGGCGRKGL--LNDVFVLDLDAQQPTWTEV-CGGAPPLPRSWHSSCT 437
H L G +++FGG GL + +++LD ++PTW + G PP HS+C
Sbjct: 8 HVAVSLPGGRILIFGG-SVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCV 184
Query: 438 IEGSKLVVSGGCTDSGVLLSDTYLLDLA 465
+ G++ +V GG T +LS+ + L LA
Sbjct: 185 VGGTRAIVMGGQTGEEWMLSELHELSLA 268
Score = 41.6 bits (96), Expect = 0.001
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 433 HSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSPPS-RLGHSLSVY 491
H + ++ G ++++ GG S Y+LD + P WR + PP GHS V
Sbjct: 8 HVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVV 187
Query: 492 GRTKILMFGG 501
G T+ ++ GG
Sbjct: 188 GGTRAIVMGG 217
>TC232366 similar to UP|Q6UEI5 (Q6UEI5) ZEITLUPE, partial (18%)
Length = 592
Score = 142 bits (358), Expect = 5e-34
Identities = 68/91 (74%), Positives = 76/91 (82%)
Frame = +2
Query: 71 TTPTSFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDP 130
T P FVV DAL+PD PIIYVN VFE TGY A++ LGRNCRFLQ R P A+RRHPLVD
Sbjct: 320 TAPCGFVVTDALDPDHPIIYVNTVFEIVTGYCAEDVLGRNCRFLQCRGPFAKRRHPLVDS 499
Query: 131 VVVAEIRRCLEEGIEFQGELLNFRKDGTPLV 161
VV+EIRRCLEEGIEFQGE+LNFRKDG+PL+
Sbjct: 500 TVVSEIRRCLEEGIEFQGEVLNFRKDGSPLM 592
>BE660680 similar to GP|14532556|gb| AT5g57360/MSF19_2 {Arabidopsis
thaliana}, partial (15%)
Length = 455
Score = 119 bits (299), Expect(2) = 5e-30
Identities = 63/110 (57%), Positives = 75/110 (67%), Gaps = 3/110 (2%)
Frame = +2
Query: 42 VDDDDGVVVVAGEAEESELPLQPGLFFYP---TTPTSFVVADALEPDFPIIYVNKVFETS 98
+ DDD V V + ++ + P +P T P FVV DAL+PD PIIYVN VFE
Sbjct: 92 LSDDDAVSYVLNDDDDDAVGPLP----FPVLQTAPCGFVVTDALDPDHPIIYVNAVFEMV 259
Query: 99 TGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVAEIRRCLEEGIEFQG 148
TGYRA+E LGRNCRFLQ R P A+RRHPLVD VV+EI R L+EG+EFQG
Sbjct: 260 TGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIXRXLDEGVEFQG 409
Score = 30.4 bits (67), Expect(2) = 5e-30
Identities = 13/24 (54%), Positives = 18/24 (74%)
Frame = +3
Query: 140 LEEGIEFQGELLNFRKDGTPLVNR 163
L +G+ + LLNF KDG+PL+NR
Sbjct: 384 LTKGLNSKVXLLNFXKDGSPLMNR 455
>AI966255 homologue to GP|28193646|gb| F-box protein ZEITLUPE {Brassica rapa
subsp. pekinensis}, partial (50%)
Length = 241
Score = 128 bits (321), Expect = 9e-30
Identities = 57/80 (71%), Positives = 69/80 (86%)
Frame = +2
Query: 429 PRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSPPSRLGHSL 488
PRSWHSS +++G+KL+ SG C DSGVL SDT+LLDL+ + P+WREIP +W+PPSRLGH+L
Sbjct: 2 PRSWHSSISLDGTKLIASGVCADSGVLPSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTL 181
Query: 489 SVYGRTKILMFGGLAKSGHL 508
SVYG KILMFGGLAKSG L
Sbjct: 182 SVYGGRKILMFGGLAKSGPL 241
Score = 53.1 bits (126), Expect = 4e-07
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 352 ADTFVLNLDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRKGLL 403
+DTF+L+L + P WR + V +PP R GHTLS G +++FGG + G L
Sbjct: 86 SDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPL 241
Score = 49.3 bits (116), Expect = 5e-06
Identities = 28/81 (34%), Positives = 43/81 (52%), Gaps = 1/81 (1%)
Frame = +2
Query: 376 PGRWGHTLSCLNGSWLVVFGGCGRKGLL-NDVFVLDLDAQQPTWTEVCGGAPPLPRSWHS 434
P W ++S L+G+ L+ G C G+L +D F+LDL ++P W E+ P R H+
Sbjct: 2 PRSWHSSIS-LDGTKLIASGVCADSGVLPSDTFLLDLSMEKPVWREIPVAWTPPSRLGHT 178
Query: 435 SCTIEGSKLVVSGGCTDSGVL 455
G K+++ GG SG L
Sbjct: 179 LSVYGGRKILMFGGLAKSGPL 241
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +2
Query: 548 PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHS 607
PR H ++S+ ++I G PS FLLD S EKP WR + V PP GH+
Sbjct: 2 PRSWHSSISLDGTKLIASGVCADSGVLPSDTFLLDLSMEKPVWREIPVAWTPPS-RLGHT 178
Query: 608 TCVVGGTRVLVLGG 621
V GG ++L+ GG
Sbjct: 179 LSVYGGRKILMFGG 220
Score = 35.4 bits (80), Expect = 0.079
Identities = 28/93 (30%), Positives = 38/93 (40%)
Frame = +2
Query: 475 PTSWSPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNE 534
P SW HS TK++ G A SG L + + +DL EKP WR++
Sbjct: 2 PRSW-------HSSISLDGTKLIASGVCADSGVL---PSDTFLLDLSMEKPVWREIPV-- 145
Query: 535 FSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGG 567
PP RL H +I++FGG
Sbjct: 146 --------AWTPPSRLGHTLSVYGGRKILMFGG 220
>TC212025 similar to UP|Q8H934 (Q8H934) Phototropin, partial (27%)
Length = 978
Score = 99.0 bits (245), Expect = 6e-21
Identities = 51/110 (46%), Positives = 69/110 (62%)
Frame = +1
Query: 75 SFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVA 134
+FVV+DA + D+PI+Y + F TGY + E +GRNCRFLQ D DP VA
Sbjct: 271 TFVVSDATKADYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAD---------TDPEDVA 423
Query: 135 EIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQI 184
+IR L+ G + G LLN++KDGTP N L ++PI D+DG V IG+Q+
Sbjct: 424 KIREALQAGKIYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGMQV 573
>TC234856 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, partial (13%)
Length = 491
Score = 91.7 bits (226), Expect = 9e-19
Identities = 45/79 (56%), Positives = 60/79 (74%), Gaps = 3/79 (3%)
Frame = +2
Query: 511 RSGEAYTIDLEDEKPQWRQLDCNEFSGL-ASQNPD--VPPPRLDHVAVSMPCGRIIIFGG 567
RS + +T+DL +E+P WR + + GL + NP PPPRLDHVAVS+P GRI+IFGG
Sbjct: 20 RSSDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGG 199
Query: 568 SIAGLHSPSQLFLLDPSEE 586
S+AGLHS SQL++LDP++E
Sbjct: 200 SVAGLHSASQLYILDPTDE 256
Score = 37.0 bits (84), Expect = 0.027
Identities = 21/73 (28%), Positives = 33/73 (44%), Gaps = 13/73 (17%)
Frame = +2
Query: 404 NDVFVLDLDAQQPTWTEVC-------------GGAPPLPRSWHSSCTIEGSKLVVSGGCT 450
+DVF +DL ++P W V GG P PR H + ++ G ++++ GG
Sbjct: 26 SDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGGSV 205
Query: 451 DSGVLLSDTYLLD 463
S Y+LD
Sbjct: 206 AGLHSASQLYILD 244
Score = 36.2 bits (82), Expect = 0.046
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Frame = +2
Query: 453 GVLLSDTYLLDLAKDNPIWREI-------------PTSWSPPSRLGHSLSVYGRTKILMF 499
G SD + +DL+++ P WR + P +PP RL H +IL+F
Sbjct: 14 GFRSSDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIF 193
Query: 500 GGLAKSGHLRLRSGEAYTIDLEDE 523
GG H + + Y +D DE
Sbjct: 194 GGSVAGLH---SASQLYILDPTDE 256
Score = 35.0 bits (79), Expect = 0.10
Identities = 26/84 (30%), Positives = 40/84 (46%), Gaps = 18/84 (21%)
Frame = +2
Query: 576 SQLFLLDPSEEKPSWRIL---NVPGQP---------PKFAWGHSTCVVGGTRVLVLGG-- 621
S +F +D SEE+P WR + +PG P P H + G R+L+ GG
Sbjct: 26 SDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGGSV 205
Query: 622 ---HTGEE-WVLNELHELCLASDL 641
H+ + ++L+ EL LAS +
Sbjct: 206 AGLHSASQLYILDPTDELSLASSV 277
Score = 28.9 bits (63), Expect = 7.4
Identities = 16/58 (27%), Positives = 25/58 (42%), Gaps = 13/58 (22%)
Frame = +2
Query: 352 ADTFVLNLDSKNPEWRRVSVKS-------------SPPGRWGHTLSCLNGSWLVVFGG 396
+D F ++L + P WR V+ +PP R H L G +++FGG
Sbjct: 26 SDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGG 199
>TC207695 weakly similar to UP|Q945N7 (Q945N7) AT5g04420/T32M21_20, partial
(87%)
Length = 2070
Score = 82.8 bits (203), Expect = 4e-16
Identities = 61/207 (29%), Positives = 100/207 (47%), Gaps = 6/207 (2%)
Frame = +1
Query: 301 LTRELTTLEAVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLD 360
LT +E + G V +R SA G+R++LFGGE + + + D VL+L+
Sbjct: 475 LTVRYIDIETCQFGVIKTSGDVPVARVGQSASLFGSRVILFGGEEMSRKLLNDVHVLDLE 654
Query: 361 SKNPEWRRVSVKSSPPG-RWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWT 419
S W + +PP R+ H+ + +L++FGGC ND+ +LD+ + +
Sbjct: 655 SMT--WEMIKTTQTPPAPRYDHSAAIQGERYLLIFGGCSHSIFFNDLHLLDMQTMEWSQP 828
Query: 420 EVCGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWR--EIPTS 477
+ G PR+ H+ TI+ S L+V GG SG +T +LD++K +W +
Sbjct: 829 QTQGDLVS-PRAGHTGITIDESWLIVGGGDNRSG--CPETLVLDMSK--LVWSVLTVVKQ 993
Query: 478 WSPPSRLGHSL---SVYGRTKILMFGG 501
P S G S+ ++ G +L FGG
Sbjct: 994 KDPLSSEGLSVCSATIGGEKYLLAFGG 1074
Score = 45.1 bits (105), Expect = 1e-04
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 14/274 (5%)
Frame = +1
Query: 362 KNPEWRRVSVKSS-PPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWTE 420
K EW ++V + P R+ H + ++ L + GG L+DV V DL + TW+
Sbjct: 163 KYDEWVPITVSGARPAARYKHAAAVVDEK-LYIAGGSRNGRHLSDVQVFDL--RSLTWSS 333
Query: 421 VC-----------GGAPPLPRSWHSSCTIEGSKLVVSGGCT-DSGVLLSDTYLLDLAKDN 468
+ LP + + G KL++ GG + +S L+ Y+ D+ +
Sbjct: 334 LKLKANVRKDDDDSSQEILPATSGHNMIRWGEKLLLLGGNSRESSAELTVRYI-DI--ET 504
Query: 469 PIWREIPTSWSPP-SRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQW 527
+ I TS P +R+G S S++G +++++FGG S L + + +DLE W
Sbjct: 505 CQFGVIKTSGDVPVARVGQSASLFG-SRVILFGGEEMSRKLL---NDVHVLDLESMT--W 666
Query: 528 RQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEK 587
+ +Q P P PR DH A ++IFGG + + L LLD +
Sbjct: 667 EMIK-------TTQTP--PAPRYDHSAAIQGERYLLIFGGCSHSIFF-NDLHLLD--MQT 810
Query: 588 PSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 621
W G GH+ + + ++V GG
Sbjct: 811 MEWSQPQTQGDLVSPRAGHTGITIDESWLIVGGG 912
>TC233050 homologue to UP|Q41384 (Q41384) Protein kinase (Fragment) , partial
(27%)
Length = 928
Score = 72.4 bits (176), Expect = 6e-13
Identities = 40/117 (34%), Positives = 59/117 (50%)
Frame = +1
Query: 75 SFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVA 134
+FV++D PD PII+ + F T Y +E LGRNCRFLQ P D V+
Sbjct: 277 NFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQ---------GPETDQATVS 429
Query: 135 EIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQIFSEANID 191
IR + E E +L+N+ K G N L P+ D G + + IG+Q+ +++
Sbjct: 430 RIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVE 600
>TC204897 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, partial (59%)
Length = 1749
Score = 70.1 bits (170), Expect = 3e-12
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Frame = +2
Query: 75 SFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVA 134
SFV+ + PD PI+Y + F TGY +E LG NCRFL D D +
Sbjct: 1103 SFVLTNPHLPDMPIVYASDAFLKLTGYAKNEVLGHNCRFLGGTD---------TDTSTLH 1255
Query: 135 EIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQI-FSEANIDLN 193
IR ++ +LN+RKD + N L ++P+ D G V + +G+QI + N D +
Sbjct: 1256 LIRESIKTEQPCTVRILNYRKDKSSFWNFLHISPVRDASGKVAYFVGVQIEDNNKNDDSH 1435
Query: 194 CVS 196
C+S
Sbjct: 1436 CLS 1444
Score = 65.5 bits (158), Expect = 7e-11
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +2
Query: 73 PTSFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVV 132
P SF + D P PI++ + F TGY E LGR Q PR R+
Sbjct: 458 PDSFTITDPSIPGHPIVFASPGFLKLTGYSLREVLGRPAAIFQ--GPRTSRKS------- 610
Query: 133 VAEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDD-GTVTHVIGIQI 184
V EIR + E Q LLN+R+DGTP R++P+ D G V H + +Q+
Sbjct: 611 VIEIREAVREERNAQVVLLNYRRDGTPFWMLFRVSPVFSSDGGAVVHFVAVQV 769
>BE556248 similar to GP|14495224|db P0682B08.13 {Oryza sativa (japonica
cultivar-group)}, partial (19%)
Length = 420
Score = 66.6 bits (161), Expect = 3e-11
Identities = 46/132 (34%), Positives = 68/132 (50%), Gaps = 4/132 (3%)
Frame = +2
Query: 308 LEAVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWR 367
LE + W K G R + SA G+++++FGG ++ + DT +L+L +K EW
Sbjct: 35 LEKMDWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTN-GLKKVNDTHILDLVTK--EWF 205
Query: 368 RVSVKSSPPG-RWGHTLSCLNGSWLVVFGGC--GRKGLLNDVFVLDLDAQQPTWTE-VCG 423
R + +PP R HT + + LV+FGG G LND+ VLDL + WT
Sbjct: 206 RPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLNDLHVLDLRTMR--WTSPTVK 379
Query: 424 GAPPLPRSWHSS 435
G P+PR HS+
Sbjct: 380 GDFPVPRDSHST 415
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 356 VLNLDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQ 415
VL LD + +W +++ PG + L G ++VFGG +ND +LDL ++
Sbjct: 20 VLCLDLEKMDWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTNGLKKVNDTHILDLVTKE 199
Query: 416 PTWTEVCGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGV-LLSDTYLLDL 464
+ C G PP PR H++ + +LV+ GG + L+D ++LDL
Sbjct: 200 -WFRPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLNDLHVLDL 346
Score = 34.7 bits (78), Expect = 0.13
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = +2
Query: 454 VLLSDTYLLDLAKDNPIWREIPTSWSPPS-RLGHSLSVYGRTKILMFGGLAKSGHLRLRS 512
V D LDL K + W ++ T+ P R HS + G K+++FGG + L+ +
Sbjct: 5 VHFGDVLCLDLEKMD--WSKLATTGEKPGPRDSHSAVLVGH-KMIVFGG---TNGLK-KV 163
Query: 513 GEAYTIDLEDEKPQWRQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAG- 571
+ + +DL + +W + C P PR H A + R++IFGGS G
Sbjct: 164 NDTHILDLVTK--EWFRPKCEGTP---------PSPRESHTATLVGDERLVIFGGSGEGE 310
Query: 572 LHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHST 608
+ + L +LD + W V G P HST
Sbjct: 311 ANYLNDLHVLDLRTMR--WTSPTVKGDFPVPRDSHST 415
>BE660669
Length = 636
Score = 60.1 bits (144), Expect = 3e-09
Identities = 37/110 (33%), Positives = 53/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 313 WRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVK 372
W + T G R A A G +V+ GG G D VL+L + P W RVSV+
Sbjct: 197 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQ 376
Query: 373 SSPPG-RWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWTEV 421
PG R+GH ++ + +L+ GG K L DV+ LD A+ W ++
Sbjct: 377 GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 526
Score = 55.1 bits (131), Expect = 1e-07
Identities = 32/112 (28%), Positives = 56/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 424 GAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSW-SPPS 482
G PP PR+ H + + G+ +V+ GG +G+ D ++LDL + P W + P
Sbjct: 218 GEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGP 394
Query: 483 RLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNE 534
R GH +++ G+ ++ GG G L + + +D + +WR+LD E
Sbjct: 395 RYGHVMALVGQRYLMAIGG--NDGKRPL--ADVWALDTAAKPYEWRKLDQKE 538
Score = 49.7 bits (117), Expect = 4e-06
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +2
Query: 365 EWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRKGL-LNDVFVLDLDAQQPTWTEVCG 423
+W R++ PP ++ G+ +V+ GG G GL D+ VLDL Q P W V
Sbjct: 194 KWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSV 373
Query: 424 GAP-PLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREI 474
P P PR H + G + +++ G D L+D + LD A WR++
Sbjct: 374 QGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 526
Score = 47.0 bits (110), Expect = 3e-05
Identities = 28/82 (34%), Positives = 46/82 (55%), Gaps = 2/82 (2%)
Frame = +2
Query: 546 PPPRLDHVAVSMPCGRIIIFGGSI--AGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFA 603
P PR HVA ++ G +++ G I AGL S L +LD +++ P W ++V G P
Sbjct: 227 PTPRAAHVATAV--GTMVVIQGGIGPAGL-SAEDLHVLDLTQQWPRWHRVSVQGPGPGPR 397
Query: 604 WGHSTCVVGGTRVLVLGGHTGE 625
+GH +VG ++ +GG+ G+
Sbjct: 398 YGHVMALVGQRYLMAIGGNDGK 463
Score = 30.8 bits (68), Expect = 1.9
Identities = 16/60 (26%), Positives = 27/60 (44%)
Frame = +2
Query: 313 WRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVK 372
W + +V G R G R ++ G +P+AD + L+ +K EWR++ K
Sbjct: 356 WHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLDQK 535
>TC204898 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, partial (22%)
Length = 815
Score = 60.1 bits (144), Expect = 3e-09
Identities = 39/145 (26%), Positives = 60/145 (40%), Gaps = 32/145 (22%)
Frame = +2
Query: 84 PDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLV--------------- 128
PD PI+Y + F TGY +E LG NCRFL D H ++
Sbjct: 11 PDMPIVYASDAFLKLTGYAKNEVLGHNCRFLGGTDTDTSTLHLVIHFFSP*VF*FCLVIW 190
Query: 129 ----------------DPVVVAEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDD 172
+ +IR ++ +LN+RKD + N L ++P+ D
Sbjct: 191 QLRVLD*WEWTILLCLSLIAYVQIRESIKTEQPCTVRILNYRKDKSSFWNFLHISPVRDA 370
Query: 173 DGTVTHVIGIQI-FSEANIDLNCVS 196
G V + +G+QI + N D +C+S
Sbjct: 371 SGKVAYFVGVQIEDNNKNDDSHCLS 445
>BG839157
Length = 740
Score = 59.3 bits (142), Expect = 5e-09
Identities = 37/85 (43%), Positives = 47/85 (54%)
Frame = +2
Query: 71 TTPTSFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDP 130
T +FVV+DA +PD PI+Y + F T TGY + E +GRNCRFLQ P D
Sbjct: 449 TLQQTFVVSDATKPDCPIMYASSGFFTMTGYSSKEIIGRNCRFLQ---------GPETDK 601
Query: 131 VVVAEIRRCLEEGIEFQGELLNFRK 155
VA+IR LE E + N+RK
Sbjct: 602 NEVAKIRDALEME-EXLWQTXNYRK 673
>TC213795
Length = 631
Score = 55.1 bits (131), Expect = 1e-07
Identities = 48/159 (30%), Positives = 67/159 (41%), Gaps = 9/159 (5%)
Frame = +2
Query: 299 GRLTRELTTLEAVSWRKFTVGGAVEPSRCNFSAC--AAGNRLV-----LFGGEGVDMQPM 351
GR +L L+ SW + V S + S AG+ L+ L G P
Sbjct: 137 GRYLNDLHVLDLRSWTWSKIEAEVVESTNSSSITFPCAGHSLIPWENKLLSIAGHTKDPN 316
Query: 352 ADTFVLNLDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGG-CGRKGLLNDVFVLD 410
V D N W + PP G G+ LV+FGG ++ LLND+ +LD
Sbjct: 317 ESIQVKVFDLPNATWTTLKTYGKPPVSRGGQSVTFVGTSLVIFGGEDAKRTLLNDLHILD 496
Query: 411 LDAQQPTWTEV-CGGAPPLPRSWHSSCTIEGSKLVVSGG 448
L+ TW E+ G PP PRS H++ L++ GG
Sbjct: 497 LETM--TWDEIDAVGVPPSPRSDHAAAVHVERYLLIFGG 607
Score = 47.4 bits (111), Expect = 2e-05
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Frame = +2
Query: 375 PPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWTEV--------CGGAP 426
P R+ H + + L ++GG LND+ VLDL + TW+++ +
Sbjct: 65 PKARYEHGAAVVQDK-LYIYGGNHNGRYLNDLHVLDLRSW--TWSKIEAEVVESTNSSSI 235
Query: 427 PLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSPP-SRLG 485
P + HS E L ++G D + + DL N W + T PP SR G
Sbjct: 236 TFPCAGHSLIPWENKLLSIAGHTKDPNESIQ-VKVFDLP--NATWTTLKTYGKPPVSRGG 406
Query: 486 HSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNEFSGLASQNPDV 545
S++ G T +++FGG R + + +DL E W ++D V
Sbjct: 407 QSVTFVG-TSLVIFGG---EDAKRTLLNDLHILDL--ETMTWDEIDA----------VGV 538
Query: 546 PP-PRLDHVAVSMPCGRIIIFGG 567
PP PR DH A ++IFGG
Sbjct: 539 PPSPRSDHAAAVHVERYLLIFGG 607
>TC204901 similar to GB|AAL15406.1|16323302|AY058232 At2g02710/T20F6.15
{Arabidopsis thaliana;} , partial (24%)
Length = 440
Score = 45.8 bits (107), Expect = 6e-05
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +1
Query: 75 SFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRH 125
SFV+ + PD PI+Y + F TGY +E LG NCRFL D H
Sbjct: 64 SFVLTNPHLPDMPIVYASDAFLKLTGYAKNEVLGHNCRFLGGTDTDTSTLH 216
>BU547384
Length = 537
Score = 44.3 bits (103), Expect = 2e-04
Identities = 31/90 (34%), Positives = 45/90 (49%)
Frame = +3
Query: 480 PPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNEFSGLA 539
P R GHS G++K+++FGGL L + D+E + QW Q +C +G
Sbjct: 177 PQRRSGHSAVNIGKSKVVVFGGLVDKKFL----SDIAVYDIEAK--QWFQPEC---TGSG 329
Query: 540 SQNPDVPPPRLDHVAVSMPCGRIIIFGGSI 569
S P R HVAV++ C + IFGG +
Sbjct: 330 SDGHVGPSSRAFHVAVAIDC-HMFIFGGRL 416
Score = 37.4 bits (85), Expect = 0.021
Identities = 28/94 (29%), Positives = 43/94 (44%), Gaps = 5/94 (5%)
Frame = +3
Query: 375 PPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWTEVCGGAP-----PLP 429
P R GH+ + S +VVFGG K L+D+ V D++A+Q E G P
Sbjct: 177 PQRRSGHSAVNIGKSKVVVFGGLVDKKFLSDIAVYDIEAKQWFQPECTGSGSDGHVGPSS 356
Query: 430 RSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLD 463
R++H + I+ + G L D ++LD
Sbjct: 357 RAFHVAVAIDCHMFIFGGRL--GSQRLGDFWVLD 452
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,882,174
Number of Sequences: 63676
Number of extensions: 542265
Number of successful extensions: 2703
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 2574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2659
length of query: 641
length of database: 12,639,632
effective HSP length: 103
effective length of query: 538
effective length of database: 6,081,004
effective search space: 3271580152
effective search space used: 3271580152
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0069.10