BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0064b.12
(223 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206636 homologue to UP|Q9SC39 (Q9SC39) Germin-like protein (Fr... 374 e-104
TC206635 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Frag... 363 e-101
TC231794 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Frag... 314 2e-86
BI427150 229 6e-61
TC211313 weakly similar to UP|Q9SC38 (Q9SC38) Germin-like protei... 229 1e-60
TC224703 similar to UP|RHRE_PEA (Q9S8P4) Rhicadhesin receptor pr... 204 3e-53
TC227305 similar to GB|AAB51752.1|1934730|ATU95036 germin-like p... 186 6e-48
TC224786 similar to GB|AAP12867.1|30017267|BT006218 At3g52820 {A... 150 4e-37
BE608701 weakly similar to GP|6689036|emb| germin-like protein {... 148 2e-36
TC221249 weakly similar to UP|GL32_ARATH (Q9SR72) Germin-like pr... 147 3e-36
AW348512 similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precurso... 145 1e-35
AW349074 similar to PIR|T07004|T07 germin homolog - potato, part... 136 7e-33
TC214768 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 136 7e-33
TC215814 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 135 1e-32
TC214056 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 131 2e-31
TC214055 weakly similar to UP|Q9AR81 (Q9AR81) Germin-like protei... 131 3e-31
AW233823 weakly similar to SP|Q9S8P4|RHRE Rhicadhesin receptor p... 130 6e-31
TC225520 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 124 3e-29
TC225519 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 122 1e-28
TC211239 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 120 6e-28
>TC206636 homologue to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
complete
Length = 931
Score = 374 bits (960), Expect = e-104
Identities = 191/223 (85%), Positives = 200/223 (89%)
Frame = +2
Query: 1 MKVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFK 60
MKVVYFLV ILAL S+ SAYDPSPLQDFCV + KDGVFVNGKFCKDP LVKAEDFFK
Sbjct: 59 MKVVYFLVAILALTSTVVSAYDPSPLQDFCVAAKE-KDGVFVNGKFCKDPKLVKAEDFFK 235
Query: 61 HVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLE 120
HVEP +T+NPLGS+VTPV V+QL GLNTLGISLARID+APKGLNPPHTHPR TEILIVLE
Sbjct: 236 HVEPANTANPLGSQVTPVFVDQLPGLNTLGISLARIDYAPKGLNPPHTHPRGTEILIVLE 415
Query: 121 GTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPG 180
GTLYVGFVTSN GNRLFTKVLNKGDVFVFPIGLIHFQLNVG GNAVAIAGLSSQNPG
Sbjct: 416 GTLYVGFVTSN--QDGNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPG 589
Query: 181 VITIANALFKASPPISQEVLTKALQVDKSIIDNLLKKSWYDNN 223
ITIANALFKA+PPIS EVLTKA QVDKSIID L K+SWYDNN
Sbjct: 590 AITIANALFKANPPISSEVLTKAFQVDKSIIDYLQKQSWYDNN 718
>TC206635 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
partial (95%)
Length = 897
Score = 363 bits (933), Expect = e-101
Identities = 186/223 (83%), Positives = 195/223 (87%)
Frame = +3
Query: 1 MKVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFK 60
MKVVY LV +LAL S+ SAYDPSPLQDFCV + KDGVFVNGKFCKDP LVKAEDFF+
Sbjct: 66 MKVVYLLVALLALTSTVVSAYDPSPLQDFCVAAKE-KDGVFVNGKFCKDPKLVKAEDFFR 242
Query: 61 HVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLE 120
HVEPG T NPLGS VT V V+QL GLNTLGI+LARIDFAPKGLN PHTHPR TEILIVLE
Sbjct: 243 HVEPGKTDNPLGSNVTQVFVDQLPGLNTLGIALARIDFAPKGLNAPHTHPRGTEILIVLE 422
Query: 121 GTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPG 180
GTLYVGFVTSN GNRLFTKVLNKGDVFVFPIGLIHFQLNVG GNAVAIAGLSSQNPG
Sbjct: 423 GTLYVGFVTSN--QDGNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPG 596
Query: 181 VITIANALFKASPPISQEVLTKALQVDKSIIDNLLKKSWYDNN 223
ITIANALFKA+PPIS EVLTKA QVDK+IID L K+SWYDNN
Sbjct: 597 AITIANALFKANPPISSEVLTKAFQVDKTIIDYLQKQSWYDNN 725
>TC231794 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
partial (95%)
Length = 757
Score = 314 bits (805), Expect = 2e-86
Identities = 159/197 (80%), Positives = 172/197 (86%)
Frame = +3
Query: 27 QDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFKHVEPGSTSNPLGSKVTPVTVEQLFGL 86
QDFCV + KDGVFVNGKFCKDP LVK EDFF HVEPG+T NP ++VTPV+V+QL GL
Sbjct: 12 QDFCVAAKE-KDGVFVNGKFCKDPKLVKPEDFFLHVEPGNTDNPNNAQVTPVSVDQLPGL 188
Query: 87 NTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGTLYVGFVTSNNANGGNRLFTKVLNK 146
NTLGISLARI+FAPKG+NPPHTHPRA+EILIVLEGTLYVGFVTSN GNRLFTKVLNK
Sbjct: 189 NTLGISLARINFAPKGINPPHTHPRASEILIVLEGTLYVGFVTSN--QDGNRLFTKVLNK 362
Query: 147 GDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPGVITIANALFKASPPISQEVLTKALQV 206
GDVFVFPIGLIHFQLNVG GNAVAIA L SQN G ITIANALFKA+PPIS EVLTKA QV
Sbjct: 363 GDVFVFPIGLIHFQLNVGYGNAVAIAALGSQNAGTITIANALFKANPPISPEVLTKAFQV 542
Query: 207 DKSIIDNLLKKSWYDNN 223
D+ +ID+L KKSWYD N
Sbjct: 543 DQKLIDDLXKKSWYDMN 593
>BI427150
Length = 422
Score = 229 bits (585), Expect = 6e-61
Identities = 116/142 (81%), Positives = 121/142 (84%), Gaps = 1/142 (0%)
Frame = +2
Query: 16 SFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFF-KHVEPGSTSNPLGSK 74
S A AYDPSPLQDFCV IND K GVFVNGKFCKDP L KAEDFF + PG+TSNPLGSK
Sbjct: 2 SIAFAYDPSPLQDFCVAINDTKTGVFVNGKFCKDPKLAKAEDFFFPGLGPGNTSNPLGSK 181
Query: 75 VTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGTLYVGFVTSNNAN 134
VT VTV ++ GLNTLGISLARIDFAPKGLNPPHTHPR TEIL+VLEGTLYVGFV SN
Sbjct: 182 VTAVTVNEILGLNTLGISLARIDFAPKGLNPPHTHPRGTEILVVLEGTLYVGFVASN--Q 355
Query: 135 GGNRLFTKVLNKGDVFVFPIGL 156
NRLFTKVLNKGDVFVFPIGL
Sbjct: 356 NDNRLFTKVLNKGDVFVFPIGL 421
>TC211313 weakly similar to UP|Q9SC38 (Q9SC38) Germin-like protein
(Fragment), partial (88%)
Length = 737
Score = 229 bits (583), Expect = 1e-60
Identities = 117/183 (63%), Positives = 140/183 (75%), Gaps = 4/183 (2%)
Frame = +2
Query: 45 KFCKDPALVKAEDFFKHVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLN 104
KFCK+P VKAEDF+K VEPG+ SN LGS VTPV V+QL GLNTLG+SLARID+ GLN
Sbjct: 2 KFCKEPKDVKAEDFYKEVEPGNPSNQLGSAVTPVFVDQLPGLNTLGLSLARIDYESMGLN 181
Query: 105 PPHTHPRATEILIVLEGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVG 164
PPH HPRATEI+IVLEG L VGF TSN GNRLF+K+L KGDVFV P+GLI FQ N G
Sbjct: 182 PPHIHPRATEIIIVLEGILLVGFATSN--QDGNRLFSKMLKKGDVFVSPMGLIQFQYNPG 355
Query: 165 SGNAVAIAGLSSQNPGVITIANALFKASPPISQEVLTKALQVDKSIIDNLLK----KSWY 220
G AV+I+ SS NPG +T+ANA+F+++P IS ++LTK+ QVDK +ID L KSW
Sbjct: 356 RGRAVSISAFSSPNPGTVTVANAVFRSNPRISTDILTKSFQVDKKVIDELQNQN*YKSWD 535
Query: 221 DNN 223
+ N
Sbjct: 536 NYN 544
>TC224703 similar to UP|RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor
(Germin-like protein), partial (91%)
Length = 1092
Score = 204 bits (519), Expect = 3e-53
Identities = 112/217 (51%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Frame = +1
Query: 1 MKVVYFLVTI-LALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFF 59
MK+ FL + LAL + SA DP PLQD CV D V VNG CKD A V A DFF
Sbjct: 130 MKLTGFLQAVTLALVLATVSASDPDPLQDLCVA--DLASAVKVNGFTCKDAAKVNASDFF 303
Query: 60 KHV--EPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILI 117
+ +PG+T+N GS VT V+++ GLNTLG+SL+RID+AP G+NPPHTHPRATE++
Sbjct: 304 SDILAKPGATNNTYGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVF 483
Query: 118 VLEGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQ 177
VLEGTL VGF+T+ N L +K ++KG++FVFP GL+HFQ N G A IA +SQ
Sbjct: 484 VLEGTLDVGFITTANV-----LISKSISKGEIFVFPKGLVHFQKNNGKEQASVIAAFNSQ 648
Query: 178 NPGVITIANALFKASPPISQEVLTKALQVDKSIIDNL 214
PG +IA LF A+PP+ VLTKA QV ++ +
Sbjct: 649 LPGTQSIALTLFAATPPVPDNVLTKAFQVGTKEVEKI 759
>TC227305 similar to GB|AAB51752.1|1934730|ATU95036 germin-like protein
{Arabidopsis thaliana;} , partial (96%)
Length = 1034
Score = 186 bits (473), Expect = 6e-48
Identities = 98/215 (45%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Frame = +3
Query: 5 YFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFKH--V 62
+ ++ A SF A DP LQD CV + P GV VNG CK + V DFF
Sbjct: 126 FAILVFFCCAISFTFASDPDTLQDLCVAL--PSSGVKVNGFACKAESNVTEADFFFAGLA 299
Query: 63 EPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGT 122
+PG+T+N LGS VT V+++ GLNTLG+S +RID+ GLNPPHTHPRATEI+ VL+G
Sbjct: 300 KPGATNNTLGSVVTAANVDKIPGLNTLGVSFSRIDYKAGGLNPPHTHPRATEIVFVLDGQ 479
Query: 123 LYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPGVI 182
L VGF+T+ N+L +K + KG++FVFP GL+H+Q N G A ++ +SQ PG +
Sbjct: 480 LDVGFITT-----ANKLISKSIKKGEIFVFPKGLVHYQKNNGDKPASVLSAFNSQLPGTV 644
Query: 183 TIANALFKASPPISQEVLTKALQVDKSIIDNLLKK 217
+IA ALF ++P + +VL +A Q+D +D++ K
Sbjct: 645 SIAAALFTSTPTVPDDVLAQAFQIDTKKVDDIKAK 749
>TC224786 similar to GB|AAP12867.1|30017267|BT006218 At3g52820 {Arabidopsis
thaliana;} , partial (82%)
Length = 1398
Score = 150 bits (379), Expect = 4e-37
Identities = 74/126 (58%), Positives = 94/126 (73%)
Frame = -1
Query: 81 EQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGTLYVGFVTSNNANGGNRLF 140
E++ GLNTLG+SL+RID+AP G+NPPHTHPRATE++ VLEGTLYVGF+T+ N L
Sbjct: 381 EKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGTLYVGFITTANV-----LI 217
Query: 141 TKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPGVITIANALFKASPPISQEVL 200
+K ++KG++FVFP GL+HFQ N G A IA +SQ PG +IA LF A+PP+ VL
Sbjct: 216 SKSISKGEIFVFPKGLVHFQKNNGKEQASVIAAFNSQLPGTQSIALTLFAATPPVPDNVL 37
Query: 201 TKALQV 206
TKA QV
Sbjct: 36 TKAFQV 19
>BE608701 weakly similar to GP|6689036|emb| germin-like protein {Pisum
sativum}, partial (48%)
Length = 439
Score = 148 bits (374), Expect = 2e-36
Identities = 81/143 (56%), Positives = 96/143 (66%)
Frame = +2
Query: 38 DGVFVNGKFCKDPALVKAEDFFKHVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARID 97
+GV+VNGK C L ED F+HVEPGST+N L ++P V GLNTLG+S++RID
Sbjct: 17 NGVYVNGKLCTHANLTIPEDNFRHVEPGSTANQLSLGLSPANVAH*PGLNTLGVSMSRID 196
Query: 98 FAPKGLNPPHTHPRATEILIVLEGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLI 157
+A K LNPPHTHPR TE+L+V+EGTL VG V N N +RLF+ LNKGDV PIGL
Sbjct: 197 YAQKDLNPPHTHPRGTEMLMVMEGTLCVGLVCCNQDN--DRLFSIELNKGDVSEVPIGLG 370
Query: 158 HFQLNVGSGNAVAIAGLSSQNPG 180
NV GNA I LSSQN G
Sbjct: 371 DDANNVRQGNAGRITDLSSQNAG 439
>TC221249 weakly similar to UP|GL32_ARATH (Q9SR72) Germin-like protein
subfamily 3 member 2 precursor, partial (58%)
Length = 1000
Score = 147 bits (372), Expect = 3e-36
Identities = 86/217 (39%), Positives = 118/217 (53%), Gaps = 1/217 (0%)
Frame = +2
Query: 2 KVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDF-FK 60
KV LV +L + ++ AS DP P+ DFC+ + N CK+ + EDF +
Sbjct: 95 KVAVLLVVLLFIIAALAS--DPDPVMDFCIAKSPD------NSFSCKNSSTATVEDFTYS 250
Query: 61 HVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLE 120
++ G V GLNTLG+S R DF G+N PH HPRATE+ VLE
Sbjct: 251 GIKSPGNFKQTGFSSMAVNSNVFPGLNTLGVSFVRADFGVGGVNVPHFHPRATEVAFVLE 430
Query: 121 GTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPG 180
G +Y GFV +N N++F KVL KG+V VFP GL+HFQ+NVG A + SQNPG
Sbjct: 431 GKIYSGFVDTN-----NKVFAKVLEKGEVMVFPRGLVHFQMNVGDRPATILGSFDSQNPG 595
Query: 181 VITIANALFKASPPISQEVLTKALQVDKSIIDNLLKK 217
++ I NA+F + I +E+L KA + + L K+
Sbjct: 596 LMRIPNAVFGSD--IKEELLEKAFGLSSKELSKLKKR 700
>AW348512 similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precursor
(Germin-like protein). [Garden pea] {Pisum sativum},
partial (72%)
Length = 604
Score = 145 bits (367), Expect = 1e-35
Identities = 76/152 (50%), Positives = 102/152 (67%)
Frame = -3
Query: 63 EPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGT 122
+PG+T+ GS VT V+++ GLNTLG+SL+RID+AP G+NPPHTHPRATE++ VLEGT
Sbjct: 587 KPGATNXTYGSXVTGAXVQKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGT 408
Query: 123 LYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPGVI 182
L VGF+T+ N L +K ++KG++FVFP GL+ FQ A IA SQ G
Sbjct: 407 LDVGFITTANV-----LISKSISKGEIFVFPKGLVLFQNINEKEQASVIAAFXSQLHGTQ 243
Query: 183 TIANALFKASPPISQEVLTKALQVDKSIIDNL 214
+IA LF A+PP+ VLTKA QV ++ +
Sbjct: 242 SIALTLFAATPPVPDNVLTKAFQVGTKEVEKI 147
>AW349074 similar to PIR|T07004|T07 germin homolog - potato, partial (70%)
Length = 597
Score = 136 bits (343), Expect = 7e-33
Identities = 70/144 (48%), Positives = 93/144 (63%)
Frame = -3
Query: 63 EPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGT 122
+PG+T+N G VT V ++ GLNT G+ L+RID+A G+NP HTH RATE++ VLEG
Sbjct: 583 KPGATNNTFGXLVTGANVHKVPGLNTXGVXLSRIDYAXGGINPLHTHSRATELVFVLEGQ 404
Query: 123 LYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPGVI 182
LYV F+T+ N L +K +NKGD+FVFP GL+HFQ N A I+ +SQ PG
Sbjct: 403 LYVXFITTCNV-----LISKSINKGDIFVFPKGLLHFQKNNAKVPAAVISAFNSQLPGTQ 239
Query: 183 TIANALFKASPPISQEVLTKALQV 206
+ A LF A+P + VLT+ QV
Sbjct: 238 STATTLFAATPSVPDHVLTQTFQV 167
>TC214768 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
partial (95%)
Length = 953
Score = 136 bits (343), Expect = 7e-33
Identities = 88/210 (41%), Positives = 120/210 (56%), Gaps = 2/210 (0%)
Frame = +1
Query: 7 LVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFKHVE--P 64
++ I++L S S S L DFCV D + G CK P+ V A+DF
Sbjct: 40 MILIISLIFSLLSFSHASVL-DFCVA--DYAGPIGPAGYSCKKPSKVTADDFAYSGLGIA 210
Query: 65 GSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGTLY 124
G+TSN + + VTP Q GLN LGIS AR+D A G+ P HTHP A+E+L+V+EG++
Sbjct: 211 GNTSNIIKAAVTPAFDAQFAGLNGLGISAARLDLAAGGVIPLHTHPGASELLVVIEGSIL 390
Query: 125 VGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNPGVITI 184
GF++S N ++ K L KGDV FP GL+HFQ+N G +A+AI SS NPG+ +
Sbjct: 391 AGFISS-----ANIVYLKTLKKGDVMAFPQGLLHFQINAGKSSALAIVSFSSSNPGLQIL 555
Query: 185 ANALFKASPPISQEVLTKALQVDKSIIDNL 214
ALFK+S P V T L D +++ L
Sbjct: 556 DFALFKSSFPTPLIVQTTFL--DAALVKKL 639
>TC215814 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
partial (95%)
Length = 1087
Score = 135 bits (341), Expect = 1e-32
Identities = 85/217 (39%), Positives = 122/217 (56%), Gaps = 6/217 (2%)
Frame = +1
Query: 4 VYFLVTILALASSFASAYDPSPLQDFCV----GINDPKDGVFVNGKFCKDPALVKAEDFF 59
++F + + L+ S AS D FCV G N P G CK PA V +DF
Sbjct: 124 LFFNIILSLLSLSHASVVD------FCVADYTGPNGPA------GYSCKSPAKVTVDDFV 267
Query: 60 KHV--EPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILI 117
G+TSN + + VTP Q G+N LGIS+AR+D A G+ P HTHP A+E+L+
Sbjct: 268 YSGLGTAGNTSNIIKAAVTPAFDAQFPGVNGLGISIARLDLAAGGVIPLHTHPGASELLV 447
Query: 118 VLEGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQ 177
V++GT+ GFV S+N ++ K L KGDV V+P GL+HFQ+N G A+A SS
Sbjct: 448 VVQGTICTGFVASDNT-----VYLKTLKKGDVMVYPQGLLHFQINDGESQALAFVSFSSA 612
Query: 178 NPGVITIANALFKASPPISQEVLTKALQVDKSIIDNL 214
NPG+ + +LFK+ P E++T+ +D +++ L
Sbjct: 613 NPGLQILDFSLFKSDFP--TELITQTTFIDAAVVKKL 717
>TC214056 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
complete
Length = 1020
Score = 131 bits (330), Expect = 2e-31
Identities = 85/215 (39%), Positives = 121/215 (55%), Gaps = 2/215 (0%)
Frame = +2
Query: 2 KVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFKH 61
K+ +V +L L SS + A +QDFCV D K G CK PA V ++DF
Sbjct: 11 KMFLHIVFLLFLLSSTSHA----TVQDFCVA--DLKGADTPAGYPCKPPANVTSDDFVYT 172
Query: 62 --VEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVL 119
E + +N + + VTP V Q GLN L +S AR+D P G+ P HTHP A E+LIVL
Sbjct: 173 GLAEAANVTNIINAAVTPAFVAQFPGLNGLELSAARLDLGPSGVIPLHTHPGANELLIVL 352
Query: 120 EGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNP 179
+G + GF++S GN ++ KVL KG++ VFP GL+HFQ+ VG A+A SS NP
Sbjct: 353 QGHILAGFISS-----GNIVYQKVLKKGELMVFPQGLLHFQIAVGKRKALAFPVFSSANP 517
Query: 180 GVITIANALFKASPPISQEVLTKALQVDKSIIDNL 214
G+ + ALF ++ S ++T+ +D ++ L
Sbjct: 518 GLQILDFALFASN--FSTPLVTQTTFLDPDLVKKL 616
>TC214055 weakly similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
complete
Length = 901
Score = 131 bits (329), Expect = 3e-31
Identities = 85/215 (39%), Positives = 123/215 (56%), Gaps = 2/215 (0%)
Frame = +1
Query: 2 KVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFKH 61
K+ +V +L+L SS + A +QDFCV D K +G CK PA V ++DF
Sbjct: 10 KMFLHIVFLLSLLSSTSHA----TVQDFCVA--DLKGADTPSGYPCKPPANVTSDDFVYT 171
Query: 62 --VEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVL 119
E + +N + + VTP V Q GLN L +S AR+D P G+ P HTHP A E+LIVL
Sbjct: 172 GLAEAANVTNIINAAVTPAFVAQFPGLNGLDLSAARLDLGPGGVIPLHTHPGANELLIVL 351
Query: 120 EGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNP 179
+G + GF++S GN ++ KVL KG++ VFP GL+HFQ+ VG A+A SS P
Sbjct: 352 QGHILAGFISS-----GNIVYQKVLKKGELMVFPQGLLHFQIAVGKRKALAFPVFSSAFP 516
Query: 180 GVITIANALFKASPPISQEVLTKALQVDKSIIDNL 214
G+ + ALF ++ S ++T+ +D +I+ L
Sbjct: 517 GLQILDFALFASN--FSTPLVTQTTFLDPAIVKKL 615
>AW233823 weakly similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precursor
(Germin-like protein). [Garden pea] {Pisum sativum},
partial (64%)
Length = 454
Score = 130 bits (326), Expect = 6e-31
Identities = 74/156 (47%), Positives = 97/156 (61%), Gaps = 2/156 (1%)
Frame = +2
Query: 11 LALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDFFKHV--EPGSTS 68
LAL + SA DP PLQD CV D V VNG CKD A V A DFF + +PG+T+
Sbjct: 8 LALVLATVSASDPDPLQDLCVA--DLASAVKVNGFTCKDAAKVNASDFF*DILAKPGATN 181
Query: 69 NPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVLEGTLYVGFV 128
N G VT V+++ LNTLG+SL R+D+AP G+NPPHTHPR T++ VLE TL V +
Sbjct: 182 NTYGCLVTGANVQKIPRLNTLGVSL*RMDYAPSGINPPHTHPRTTKVRWVLERTLXVRCI 361
Query: 129 TSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVG 164
T+ GN L +K +NK ++ + P G H++ N G
Sbjct: 362 TT-----GNGLISKXINKDEICILPKGEGHWRKNNG 454
>TC225520 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 834
Score = 124 bits (311), Expect = 3e-29
Identities = 82/212 (38%), Positives = 111/212 (51%), Gaps = 4/212 (1%)
Frame = +1
Query: 1 MKVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDF-F 59
MK+++FL + AL S + A + DFCV D K +G CK P V +DF F
Sbjct: 28 MKMIHFLF-LFALVSFTSHA----SVNDFCVA--DLKGPDSPSGYQCKPPNTVTVDDFVF 186
Query: 60 KHVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVL 119
G+T+N + +T V G+N LG+S AR+D A G P HTHP ATE+LI++
Sbjct: 187 SGFVAGNTTNTFNAALTSAFVTDFPGVNGLGVSAARLDIAKGGSIPMHTHPAATELLIMV 366
Query: 120 EGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNP 179
EG + GF+T L+TK L GD+ VFP G +HFQ+N G+G A A SS NP
Sbjct: 367 EGQITAGFMTP------TALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANP 528
Query: 180 GVITIANALFKASPP---ISQEVLTKALQVDK 208
G + LF + P ++Q QV K
Sbjct: 529 GAQLLDLLLFGNTLPSDLVAQTTFLDVAQVKK 624
>TC225519 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 961
Score = 122 bits (306), Expect = 1e-28
Identities = 81/212 (38%), Positives = 111/212 (52%), Gaps = 4/212 (1%)
Frame = +2
Query: 1 MKVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDF-F 59
MK+++ L + AL S + A + DFCV D K +G CK P V +DF F
Sbjct: 32 MKMIHVLF-LFALVSFTSHA----SVNDFCVA--DLKGPDSPSGYQCKPPNTVTVDDFVF 190
Query: 60 KHVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVL 119
G+T+N + +T V G+N LG+S+AR+D A G P HTHP ATE+LI++
Sbjct: 191 SGFVAGNTTNTFNAALTSAFVTDFPGVNGLGVSVARLDIAKGGSIPMHTHPAATELLIMV 370
Query: 120 EGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNP 179
EG + GF+T L+TK L GD+ VFP G +HFQ+N G+G A A SS NP
Sbjct: 371 EGQITAGFMTP------TALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANP 532
Query: 180 GVITIANALFKASPP---ISQEVLTKALQVDK 208
G + LF + P ++Q QV K
Sbjct: 533 GAQLLDLLLFGNTLPSDLVAQTTFLDVAQVKK 628
>TC211239 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 877
Score = 120 bits (300), Expect = 6e-28
Identities = 82/212 (38%), Positives = 108/212 (50%), Gaps = 4/212 (1%)
Frame = +3
Query: 1 MKVVYFLVTILALASSFASAYDPSPLQDFCVGINDPKDGVFVNGKFCKDPALVKAEDF-F 59
MK++Y +LAL SS + A + DFCV D +G CK P V DF
Sbjct: 45 MKMIYIFF-LLALLSSTSHA----SVNDFCVANLKGPDSP--SGYQCKPPNTVTVNDFVL 203
Query: 60 KHVEPGSTSNPLGSKVTPVTVEQLFGLNTLGISLARIDFAPKGLNPPHTHPRATEILIVL 119
G+T+N + +TP V +L G+N LGIS AR+D A G P H+HP A+EILI++
Sbjct: 204 SGFVAGNTTNAFNAALTPAFVTELPGVNGLGISAARLDLAKGGSVPMHSHPGASEILIMV 383
Query: 120 EGTLYVGFVTSNNANGGNRLFTKVLNKGDVFVFPIGLIHFQLNVGSGNAVAIAGLSSQNP 179
+G + G +T ++ K L GDV VFP GL+HFQ N G G A A SS NP
Sbjct: 384 KGQITAGILTP------GAVYEKTLKPGDVMVFPQGLLHFQANSGKGKATAFVAFSSANP 545
Query: 180 GVITIANALFKASPP---ISQEVLTKALQVDK 208
G + LF S P ++Q QV K
Sbjct: 546 GAQLLDLLLFGNSLPSDLVAQTTFLDVAQVKK 641
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,312,723
Number of Sequences: 63676
Number of extensions: 113120
Number of successful extensions: 598
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of query: 223
length of database: 12,639,632
effective HSP length: 94
effective length of query: 129
effective length of database: 6,654,088
effective search space: 858377352
effective search space used: 858377352
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0064b.12