TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0061.9
         (277 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC217508 similar to UP|Q6W2J1 (Q6W2J1) VDAC3.1, complete              482  e-137
TC204556 homologue to UP|Q6W2J5 (Q6W2J5) VDAC1.1, complete            256  1e-68
TC226511 similar to UP|Q6W2J2 (Q6W2J2) VDAC2.1, complete              254  3e-68
TC214669 homologue to UP|Q6W2J3 (Q6W2J3) VDAC1.3, complete            241  2e-64
TC217509 similar to UP|Q6W2J1 (Q6W2J1) VDAC3.1, partial (36%)         175  2e-44
TC204557 similar to UP|Q6W2J4 (Q6W2J4) VDAC1.2, partial (64%)         170  6e-43
TC214640 similar to UP|Q6W2J3 (Q6W2J3) VDAC1.3, partial (72%)         157  5e-39
AW310394 similar to GP|9758310|dbj| porin-like protein {Arabidop...   139  1e-33
TC234551 weakly similar to UP|Q6W2J2 (Q6W2J2) VDAC2.1, partial (...   129  1e-30
AW704159 weakly similar to PIR|T12558|T12 porin - common ice pla...   125  2e-29
AW568478 weakly similar to GP|5031279|gb| porin {Prunus armeniac...   123  8e-29
TC209012 homologue to UP|Q6W2J4 (Q6W2J4) VDAC1.2, partial (49%)       123  8e-29
TC209013 homologue to UP|Q6W2J4 (Q6W2J4) VDAC1.2, partial (37%)        92  3e-19
AW132758 weakly similar to PIR|S36454|S36 porin por1 - garden pe...    86  2e-17
AW733991 weakly similar to PIR|S36454|S36 porin por1 - garden pe...    81  5e-16
AI856007                                                               77  9e-15
AW309803 weakly similar to GP|5031279|gb| porin {Prunus armeniac...    67  1e-11
AW099857 weakly similar to GP|29367429|gb| porin-like protein {O...    64  7e-11
TC209882 weakly similar to UP|Q9FJX3 (Q9FJX3) Porin-like protein...    62  4e-10
BE331557 weakly similar to GP|5031279|gb|A porin {Prunus armenia...    57  9e-09

>TC217508 similar to UP|Q6W2J1 (Q6W2J1) VDAC3.1, complete
          Length = 1448

 Score =  482 bits (1241), Expect = e-137
 Identities = 237/277 (85%), Positives = 256/277 (91%)
 Frame = +1

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           MANGPA + EIGKRA+DLLYKDYNFD KF+LSIP+STGLGLIATGLKKD++F+GDI+TLY
Sbjct: 187 MANGPAPFSEIGKRAKDLLYKDYNFDHKFSLSIPNSTGLGLIATGLKKDKLFVGDISTLY 366

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           KSGN TVDVKVDTYSN+ TKVT+NDI    K ALSFNIPDHKSGKLDVQYLHPHAA+DSS
Sbjct: 367 KSGNTTVDVKVDTYSNIYTKVTVNDILHGTKAALSFNIPDHKSGKLDVQYLHPHAAVDSS 546

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           IGLNPSP LELS AIGSKDLC+GAEVGFNTTSASFTKYNAG+ FN+PDFS ALML DKG+
Sbjct: 547 IGLNPSPLLELSAAIGSKDLCLGAEVGFNTTSASFTKYNAGVAFNKPDFSVALMLADKGQ 726

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
           +LKASYIH+VDRPDGFTVAAEI+HRFSS ENRFTIGSSQ IDP TVLKTRFSDDGKAAF 
Sbjct: 727 TLKASYIHYVDRPDGFTVAAEISHRFSSLENRFTIGSSQSIDPKTVLKTRFSDDGKAAFQ 906

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
           CQRAWRP SLITLSAEYDSTKIFGSSTK GLALAL+P
Sbjct: 907 CQRAWRPNSLITLSAEYDSTKIFGSSTKFGLALALKP 1017


>TC204556 homologue to UP|Q6W2J5 (Q6W2J5) VDAC1.1, complete
          Length = 1312

 Score =  256 bits (653), Expect = 1e-68
 Identities = 127/277 (45%), Positives = 181/277 (64%)
 Frame = +2

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           MA GP LY +IGK+ARDLL+KDY+ DQKF ++  S TG+ + A+G +K ++F+ D+NT  
Sbjct: 122 MAKGPGLYSDIGKKARDLLFKDYHSDQKFTITTYSPTGVAITASGTRKSELFLADVNTQL 301

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K+ N+T D+KVDT SN+ T +T+N+     K   SF +PD +SGK++VQYLH +A I +S
Sbjct: 302 KNKNITTDIKVDTDSNLFTTITVNEPAPGLKAIFSFKVPDQRSGKVEVQYLHDYAGISTS 481

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           +GL  +P +  S  IG+  L +GA++ F+T     TK NAG++F + D  A+L L DKG 
Sbjct: 482 VGLTANPIVNFSGVIGTNVLALGADLSFDTKIGELTKSNAGLSFTKDDLIASLTLNDKGD 661

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
           +L A+Y H V+      V AE+ HRFS+ EN  T+G+   +DP T LK R ++ G+ + L
Sbjct: 662 ALNAAYYHVVNPLTNTAVGAEVTHRFSTNENTLTLGTQHQLDPLTTLKARVNNFGRTSAL 841

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q  WRPKS  T+S E D TK    S K+GL L L+P
Sbjct: 842 IQHEWRPKSFFTISGEVD-TKAIEKSAKVGLGLVLKP 949


>TC226511 similar to UP|Q6W2J2 (Q6W2J2) VDAC2.1, complete
          Length = 1208

 Score =  254 bits (649), Expect = 3e-68
 Identities = 126/277 (45%), Positives = 180/277 (64%)
 Frame = +2

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M+ GP L+ +IGK+++DLL KDYN DQK  +S  S +G+ L +T +KK  +  GD+  LY
Sbjct: 62  MSKGPGLFTDIGKKSKDLLTKDYNSDQKLTISSYSISGVALTSTSVKKGGLSTGDVAALY 241

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K  N  +DVK+DT S +ST +T ND+    K   SF +PD+ SGKL+VQY H HA + ++
Sbjct: 242 KYKNTIIDVKLDTASTISTTLTFNDVLPSTKTIASFKLPDYNSGKLEVQYFHDHATLTTA 421

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           + L  SP +++S  +G+  + +GAE G++T+S  FTKY AGI+  RPD SA+++L DKG 
Sbjct: 422 VALKQSPVIDVSATVGTPTIALGAEAGYDTSSGGFTKYTAGISVTRPDSSASVILGDKGD 601

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
           S+KASY+HH+D        AEI  +FS+ EN FT+G S  +DP T +K R ++ GK   L
Sbjct: 602 SIKASYLHHLDLLKKSAAVAEITRKFSTNENIFTVGGSFAVDPLTQVKARLNNHGKLGAL 781

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q    PKS+ T+S E D TK      + GLA+AL+P
Sbjct: 782 LQHEIIPKSVFTVSGEID-TKALDKKPRFGLAIALKP 889


>TC214669 homologue to UP|Q6W2J3 (Q6W2J3) VDAC1.3, complete
          Length = 1374

 Score =  241 bits (616), Expect = 2e-64
 Identities = 122/277 (44%), Positives = 180/277 (64%)
 Frame = +3

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M  GP LY +IGKRARDLL+KDY  D KF ++  +STG+ + +TG++K +I++ D++T  
Sbjct: 222 MVKGPGLYSDIGKRARDLLFKDYQNDHKFTITTYTSTGVEITSTGVRKGEIYLADVSTKV 401

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K+ N+T DVKVDT SN+ T +T+++     K   SFN PD KSGK+++QY H +A I++S
Sbjct: 402 KNKNITTDVKVDTNSNLRTTITVDEPAPGLKTIFSFNFPDQKSGKVELQYQHEYAGINTS 581

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           IGL  +P +  S  +G+  + +G ++ F+T S +FTKYNAG+     D  A+L L DKG 
Sbjct: 582 IGLTANPVVNFSGVVGNNLVAVGTDLSFDTASGNFTKYNAGLNITHADLIASLTLNDKGD 761

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
           +L ASY H V+      V AE++H FS  EN  T G+   +DP T+LK+R ++ G+A+ L
Sbjct: 762 NLTASYYHIVNPLTNTAVGAELSHSFSGNENILTFGTQHALDPLTLLKSRVNNYGRASAL 941

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q  W P++  +L  E D T     S K+GLA+AL+P
Sbjct: 942 IQHDWTPRTRFSLVGEVD-TGAIEKSAKVGLAVALKP 1049


>TC217509 similar to UP|Q6W2J1 (Q6W2J1) VDAC3.1, partial (36%)
          Length = 792

 Score =  175 bits (443), Expect = 2e-44
 Identities = 86/101 (85%), Positives = 94/101 (92%)
 Frame = +1

Query: 177 DKGKSLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGK 236
           DKG++LKASYI++VDRPDGFTVAAEI+H FS+FENRFTIGSSQ ID  TV+KTRFSDDGK
Sbjct: 1   DKGQTLKASYINYVDRPDGFTVAAEISHSFSTFENRFTIGSSQSIDSKTVVKTRFSDDGK 180

Query: 237 AAFLCQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
           AAF CQRAWRP SLITLSAEYDSTKIFGSSTK GLALAL+P
Sbjct: 181 AAFQCQRAWRPNSLITLSAEYDSTKIFGSSTKFGLALALKP 303


>TC204557 similar to UP|Q6W2J4 (Q6W2J4) VDAC1.2, partial (64%)
          Length = 632

 Score =  170 bits (431), Expect = 6e-43
 Identities = 79/178 (44%), Positives = 119/178 (66%)
 Frame = +2

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M+ GP LY +IGK+ARDLL+KDY+ DQKF ++  S TG+ + ++G KK  +F+ D+NT  
Sbjct: 29  MSKGPGLYSDIGKKARDLLFKDYHSDQKFTITTYSPTGVAITSSGTKKGDLFVADVNTQL 208

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K+ N+T D+KVDT SN+ T +T+N+     K   SF +PD +SGK++VQYLH +A I +S
Sbjct: 209 KNKNITTDIKVDTGSNLFTTITVNEPAPGLKTIFSFRVPDQRSGKVEVQYLHDYAGISTS 388

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDK 178
           +GL  +P +  S  +G+  L +G +V F+T     TK+NAG+ F + D  A+L +  K
Sbjct: 389 VGLTANPIVNFSGVVGTNVLALGTDVSFDTKIGELTKFNAGLNFTKDDLVASLTVNTK 562


>TC214640 similar to UP|Q6W2J3 (Q6W2J3) VDAC1.3, partial (72%)
          Length = 942

 Score =  157 bits (397), Expect = 5e-39
 Identities = 83/199 (41%), Positives = 121/199 (60%)
 Frame = +1

Query: 79  TKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPSPQLELSTAIGSK 138
           T +T+++     K   SFN PD KSGK+++QY H +A I +SIGL  +P +  S  +G+ 
Sbjct: 7   TIITVDEPAPGLKTIFSFNFPDQKSGKVELQYQHEYAGISTSIGLTANPVVNFSGVVGNN 186

Query: 139 DLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGKSLKASYIHHVDRPDGFTV 198
            + +G ++ F+TTS +FTKYNAG+     D  A+L L DKG +L ASY H V+      V
Sbjct: 187 LVAVGTDLSFDTTSGNFTKYNAGLNITHADLIASLTLNDKGDNLTASYYHIVNPLTNSAV 366

Query: 199 AAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFLCQRAWRPKSLITLSAEYD 258
            AE++H FS  EN  T G+   +DP T+LK R ++ G+A+ L Q  W P++  +L  E D
Sbjct: 367 GAELSHSFSGNENILTFGTQHALDPLTLLKARVNNYGRASALIQHDWTPRTRFSLVGEVD 546

Query: 259 STKIFGSSTKLGLALALQP 277
            T     S K+GLA+AL+P
Sbjct: 547 -TGAIEKSAKVGLAVALKP 600


>AW310394 similar to GP|9758310|dbj| porin-like protein {Arabidopsis
           thaliana}, partial (10%)
          Length = 352

 Score =  139 bits (350), Expect = 1e-33
 Identities = 75/109 (68%), Positives = 82/109 (74%)
 Frame = -1

Query: 168 DFSAALMLVDKGKSLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVL 227
           D S AL L  + ++ KAS IH VDR     V AEI+HR+SS E R TIGSSQ IDP +VL
Sbjct: 328 DSSGALELDHQEQTXKASTIHDVDRSHELLVEAEISHRYSSLEIRLTIGSSQSIDPKSVL 149

Query: 228 KTRFSDDGKAAFLCQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQ 276
           KTRFS DGK AF C RAWRP SLITL AEYDSTKIFGSSTK GLALAL+
Sbjct: 148 KTRFSHDGKDAFQCPRAWRPNSLITLCAEYDSTKIFGSSTKFGLALALK 2


>TC234551 weakly similar to UP|Q6W2J2 (Q6W2J2) VDAC2.1, partial (41%)
          Length = 467

 Score =  129 bits (324), Expect = 1e-30
 Identities = 63/148 (42%), Positives = 93/148 (62%)
 Frame = +3

Query: 4   GPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLYKSG 63
           GP  + EIGKR RD+L KDYN DQ+F +S  +++GL L +T +K   +  GD+   +K  
Sbjct: 18  GPGFFSEIGKRGRDILTKDYNSDQRFTISSSTNSGLDLKSTLVKSRGLSSGDVAAEFKYK 197

Query: 64  NLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGL 123
           N  V+VKVDT SNV T  T++D+    K   S  +PD+ SGK++VQYLH H A    +GL
Sbjct: 198 NKAVNVKVDTESNVLTTFTVSDVVPSAKTIASIRLPDYSSGKVEVQYLHEHVAFTLGVGL 377

Query: 124 NPSPQLELSTAIGSKDLCMGAEVGFNTT 151
           + SP ++ S  +G+  +  GAE  ++T+
Sbjct: 378 DRSPVIDFSGTMGTPSIAFGAETSYSTS 461


>AW704159 weakly similar to PIR|T12558|T12 porin - common ice plant, partial
           (62%)
          Length = 526

 Score =  125 bits (314), Expect = 2e-29
 Identities = 62/165 (37%), Positives = 98/165 (58%)
 Frame = +2

Query: 4   GPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLYKSG 63
           GP LY  I K+ARDLL+ DY+ +QKF ++  S TG+ + A+G  K ++F+ D+NT +K+ 
Sbjct: 5   GPGLYSNISKKARDLLFNDYHSNQKFTITTYSPTGMAITASGTTKSELFLADVNTQFKNK 184

Query: 64  NLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGL 123
           N+T D+K+DT SN+ T +T+N+     K   SF   + KSGK+   YLH +  I +SI L
Sbjct: 185 NMTTDMKLDTNSNLFTTITINEPTPGLKAICSFISANQKSGKVKGHYLHDYTGISTSIEL 364

Query: 124 NPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPD 168
             +P +  S+ I +  L +   +  ++     TK N G+ F + D
Sbjct: 365 TANPIINFSSIIETNILALNTNLAVDSKIV*CTKCNTGLNFTKDD 499


>AW568478 weakly similar to GP|5031279|gb| porin {Prunus armeniaca}, partial
           (63%)
          Length = 526

 Score =  123 bits (309), Expect = 8e-29
 Identities = 65/174 (37%), Positives = 104/174 (59%)
 Frame = +2

Query: 4   GPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLYKSG 63
           GP+L+ +I  RA DLL KDY  D  F L+  +ST + +  TG+   +I++ D+    K+ 
Sbjct: 5   GPSLFSDIDMRAGDLLRKDYLNDHTFTLTTYTSTVVEITLTGVMIGEIYLADVIPNAKNK 184

Query: 64  NLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGL 123
           N+T DVK+DTYS++ T +T+++         S+  PD KSG+ ++Q  H +A I +SIGL
Sbjct: 185 NITSDVKLDTYSHMRTIITVDEPAPGLNTIFSYYYPDQKSGEAELQNQHEYAGISTSIGL 364

Query: 124 NPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVD 177
             +P +  S  +G+  +  G ++  +TTS +FTKY+AG+     D  A+L L D
Sbjct: 365 TANPVVNFSGVVGNN*VAAGTDLSSDTTSGNFTKYSAGLNITHADLIASLSLND 526


>TC209012 homologue to UP|Q6W2J4 (Q6W2J4) VDAC1.2, partial (49%)
          Length = 624

 Score =  123 bits (309), Expect = 8e-29
 Identities = 63/136 (46%), Positives = 84/136 (61%)
 Frame = +2

Query: 142 MGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGKSLKASYIHHVDRPDGFTVAAE 201
           +G +V F+T     TK+NAG+ F + D  A+L + DKG +L ASY H V+R     V AE
Sbjct: 2   LGTDVSFDTKIGELTKFNAGLNFTKDDLVASLTVNDKGDALNASYYHAVNRLTNTAVGAE 181

Query: 202 INHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFLCQRAWRPKSLITLSAEYDSTK 261
           + HRFS+ EN  T+G+   +DP T +K R ++ GKA  L Q  WRPKS  T+S E D TK
Sbjct: 182 VTHRFSTNENTLTLGTQHALDPLTTMKARVNNFGKANALIQHEWRPKSFFTISGEVD-TK 358

Query: 262 IFGSSTKLGLALALQP 277
               S K+GL LAL+P
Sbjct: 359 AIEKSAKVGLGLALKP 406


>TC209013 homologue to UP|Q6W2J4 (Q6W2J4) VDAC1.2, partial (37%)
          Length = 716

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 48/101 (47%), Positives = 63/101 (61%)
 Frame = +1

Query: 177 DKGKSLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGK 236
           +KG SL ASY H V+R     V AE+ H+FS+ EN  T+G+   +DP T +K R ++ GK
Sbjct: 214 NKGDSLNASYYHTVNRLTNTAVGAEVTHQFSTNENTLTLGTQHALDPLTTVKARVNNLGK 393

Query: 237 AAFLCQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
           A  L Q  WRP+S  T+S E D TK    S K+GL LAL+P
Sbjct: 394 ANALIQHEWRPRSFFTISGEVD-TKAIEKSAKVGLGLALKP 513


>AW132758 weakly similar to PIR|S36454|S36 porin por1 - garden pea, partial
           (49%)
          Length = 565

 Score = 85.5 bits (210), Expect = 2e-17
 Identities = 49/175 (28%), Positives = 93/175 (53%)
 Frame = +2

Query: 10  EIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLYKSGNLTVDV 69
           +I  +A+D+L+ DY+ DQ+  ++    T L + A+   K ++   D+NT  ++  +T D+
Sbjct: 5   DISNKAKDVLFTDYHVDQRLTITTY*PTALAMTASRTTKSELLAADVNTQLENKIITTDL 184

Query: 70  KVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPSPQL 129
             DT SN  T +  N+     K  ++   PD  SG +++ YLH +A I +S+ L  +  +
Sbjct: 185 NSDTDSNRLTTIADNEPAYGLKAIINCKEPDAMSG*VEMTYLHYYAGISTSVWLT*NALV 364

Query: 130 ELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGKSLKA 184
           + S  IG+    +GA++  +  S   T Y A ++  + D  A L + ++G ++ A
Sbjct: 365 KFSGVIGTNGHALGADLYIDIRSEE*TIYIAALSCTKYDLIALLTINEQGDAMNA 529


>AW733991 weakly similar to PIR|S36454|S36 porin por1 - garden pea, partial
           (49%)
          Length = 409

 Score = 81.3 bits (199), Expect = 5e-16
 Identities = 41/134 (30%), Positives = 75/134 (55%)
 Frame = +2

Query: 35  SSTGLGLIATGLKKDQIFIGDINTLYKSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVAL 94
           S TG G+  TG +K +  + +++T  K+ N+T D++VDT +N+ T +T+N+     +   
Sbjct: 8   SHTGAGIATTGTRKREREVAEVDTQTKNKNITTDIEVDTDTNLYTTITVNEPEPGLEAMA 187

Query: 95  SFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSAS 154
           SF + D + GK +V+  H +  I +S G+     + +    G++   +GAE   +T +  
Sbjct: 188 SFKVTDQRPGKGEVED*HEYDGISTSAGVRAKANVNVYGVRGTRAHALGAEADVDTKTEE 367

Query: 155 FTKYNAGITFNRPD 168
            TK NAG++F + D
Sbjct: 368 VTKTNAGVSFTKDD 409


>AI856007 
          Length = 325

 Score = 77.0 bits (188), Expect = 9e-15
 Identities = 39/108 (36%), Positives = 64/108 (59%)
 Frame = -1

Query: 123 LNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGKSL 182
           ++ S  + ++  +G+  + M AE G++T+S  FT+Y  GI+  RPD SA+++   KG S+
Sbjct: 325 MSQSLVIHVAATVGTAPIAMCAEAGYDTSSGGFTQYTDGISVTRPDSSASVICGVKGVSI 146

Query: 183 KASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTR 230
            AS +HH+D        AEI  +FS+ E+  T+  S  +DP T +K R
Sbjct: 145 NASCLHHMDILKKSAAVAEITRKFSTNESILTVVGSPAVDPLTQVKAR 2


>AW309803 weakly similar to GP|5031279|gb| porin {Prunus armeniaca}, partial
           (38%)
          Length = 349

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 40/106 (37%), Positives = 59/106 (54%)
 Frame = -1

Query: 171 AALMLVDKGKSLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTR 230
           A+L L DKG +L AS  H V+      V AE++  FS  EN+ T G+   +DP T+LK R
Sbjct: 316 ASLTLKDKGATLFASNSHIVNPLXNSAVGAELSQSFSGKENKLTFGTQHALDPLTLLKAR 137

Query: 231 FSDDGKAAFLCQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQ 276
            ++ G A+ L Q  W PK+  +L  E + T       K+G ++AL+
Sbjct: 136 VNNYGWASVLIQPDWTPKTQFSLVGEVE-TGAIKKRAKVGFSVALK 2


>AW099857 weakly similar to GP|29367429|gb| porin-like protein {Oryza
          sativa (japonica cultivar-group)}, partial (22%)
          Length = 419

 Score = 63.9 bits (154), Expect = 7e-11
 Identities = 36/77 (46%), Positives = 49/77 (62%), Gaps = 1/77 (1%)
 Frame = +2

Query: 11 IGKRARDLLYKDYNFDQKFNLSIPSS-TGLGLIATGLKKDQIFIGDINTLYKSGNLTVDV 69
          IGK  RD+L KDYN DQ+F  S  S+ +GL L +T +K   +  GD+   +K  N  V+V
Sbjct: 2  IGKIGRDILMKDYNSDQRFTFSSSSTNSGLDLKSTLVKSRGLSSGDVAAAFKYKNKAVNV 181

Query: 70 KVDTYSNVSTKVTLNDI 86
          KVDT SNV T  T++D+
Sbjct: 182KVDTESNVLTTFTVSDV 232


>TC209882 weakly similar to UP|Q9FJX3 (Q9FJX3) Porin-like protein, partial
           (29%)
          Length = 498

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 32/92 (34%), Positives = 51/92 (54%)
 Frame = +3

Query: 186 YIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFLCQRAW 245
           Y++ ++R +G  V  EI+ RFS+ EN  T+G   ++D  T LK + ++ G    L Q   
Sbjct: 3   YLYQLERLNGGAVVGEISRRFSTNENTLTVGCLYVVDSQTALKAKLNNHGNLGALLQHEL 182

Query: 246 RPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
             KS +T+S+ ++ TK    S K G  L L+P
Sbjct: 183 TRKSFLTISSAFE-TKDLDKSPKFGFTLLLKP 275


>BE331557 weakly similar to GP|5031279|gb|A porin {Prunus armeniaca}, partial
           (34%)
          Length = 286

 Score = 57.0 bits (136), Expect = 9e-09
 Identities = 32/95 (33%), Positives = 48/95 (49%)
 Frame = +2

Query: 94  LSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSA 153
           LSFN PD KS  + + Y H +A + ++I L  +  +  S  +G   +       F+TTS 
Sbjct: 2   LSFNFPDQKSLLVQLLYQHDYAGLTTTIRLTANTVVNFSGVVGHNLVAAVT*HSFDTTSG 181

Query: 154 SFTKYNAGITFNRPDFSAALMLVDKGKSLKASYIH 188
           + TKYNA +     D  A L L D+G +  +S  H
Sbjct: 182 NSTKYNARLDITHADLVAYLTLNDRGDTFSSSCYH 286


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.135    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,682,251
Number of Sequences: 63676
Number of extensions: 130715
Number of successful extensions: 617
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of query: 277
length of database: 12,639,632
effective HSP length: 96
effective length of query: 181
effective length of database: 6,526,736
effective search space: 1181339216
effective search space used: 1181339216
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)