BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0060.8
(786 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 63 6e-10
TC231231 weakly similar to UP|Q88TJ4 (Q88TJ4) Cell surface prote... 55 9e-08
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 55 2e-07
TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g4... 54 3e-07
TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Pro... 54 3e-07
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 52 8e-07
TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 51 2e-06
TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C2... 50 5e-06
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 47 3e-05
TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 46 6e-05
TC218463 46 7e-05
BE822052 similar to GP|4557063|gb|A expressed protein {Arabidops... 45 9e-05
TC210776 similar to UP|Q8H6B1 (Q8H6B1) Global transcription fact... 45 9e-05
TC218462 45 2e-04
TC219459 similar to GB|AAO63318.1|28950789|BT005254 At5g30145 {A... 44 2e-04
CF922292 44 4e-04
TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%) 43 5e-04
TC207527 weakly similar to UP|O08661 (O08661) Ryanodine receptor... 43 5e-04
TC213605 weakly similar to UP|RN12_HUMAN (Q9NVW2) RING finger pr... 43 6e-04
TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 42 0.001
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 62.8 bits (151), Expect = 6e-10
Identities = 44/135 (32%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +2
Query: 491 EVNIATEVPGAELLHIDS------DDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAE 544
EV + E E +D DDE E D DD +DDE D DDDE
Sbjct: 263 EVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGGDDDDDE-- 436
Query: 545 DNSVVSDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAK 604
DDEE D + G DDDD+D +DD +D E DEE E E++ G+
Sbjct: 437 ------DDEEEGDVQRGGEPDDDDND---SDDDSDDDEDEDEEDEEEQGEEEDLGTEYLI 589
Query: 605 STLKETSKKRKFADF 619
L+ ++ +DF
Sbjct: 590 RPLETAEEEEASSDF 634
Score = 60.1 bits (144), Expect = 4e-09
Identities = 40/120 (33%), Positives = 60/120 (49%), Gaps = 7/120 (5%)
Frame = +2
Query: 484 ARPKAYGEVNIATEVPGAELLHIDSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEA 543
++ KA E++ E ++L + D+E ES D +DE + D+ G D+D+
Sbjct: 215 SKMKATKELSEQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDE 394
Query: 544 EDNSV-------VSDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYED 596
ED++ DDEE D + G DDDD+D + DD ED ++ DEE E E ED
Sbjct: 395 EDDAPDGGDDDDDEDDEEEGDVQRGGEPDDDDNDSDDDSDDDEDEDEEDEE--EQGEEED 568
Score = 44.3 bits (103), Expect = 2e-04
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Frame = +2
Query: 516 DSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSE-------IGVSDDDDD 568
+++ V DDE D D ++ ED DD+E D++ G DDDD+
Sbjct: 257 ENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGGDDDDDE 436
Query: 569 DDV---------EVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKST 606
DD E +DD + + SD++ E E E+ G E T
Sbjct: 437 DDEEEGDVQRGGEPDDDDNDSDDDSDDDEDEDEEDEEEQGEEEDLGT 577
Score = 42.7 bits (99), Expect = 6e-04
Identities = 31/112 (27%), Positives = 48/112 (42%)
Frame = +2
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDD 566
D DD+++ + D G D+ D+ SDDD +D +DEE E + +
Sbjct: 419 DDDDDEDDEEEGDVQRGGEPDD-----DDNDSDDDSDDDEDEDEEDEEEQGEEEDLGTEY 583
Query: 567 DDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRKFAD 618
+E E++ S+ EE GE E + +D E E KRK +D
Sbjct: 584 LIRPLETAEEEEASSDFEPEENGEEEEEDVDDEDCEK----AEAPPKRKRSD 727
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/106 (23%), Positives = 48/106 (44%), Gaps = 12/106 (11%)
Frame = +2
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDE------------E 554
D DDE + + D DD++ D++ D+DE E++ +E E
Sbjct: 422 DDDDEDDEEEGDVQRGGEPDDDDNDSDDDSDDDEDEDEEDEEEQGEEEDLGTEYLIRPLE 601
Query: 555 SSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGS 600
+++ E SD + +++ E +E+D++D + E + D D S
Sbjct: 602 TAEEEEASSDFEPEENGEEEEEDVDDEDCEKAEAPPKRKRSDKDDS 739
Score = 40.4 bits (93), Expect = 0.003
Identities = 20/72 (27%), Positives = 37/72 (50%)
Frame = +2
Query: 527 DENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDE 586
D T +E E +V +D+E +S V DD +DD+ E ++DD ++ + +D+
Sbjct: 212 DSKMKATKELSEQVEENEVKVLVEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDD 391
Query: 587 EVGEVSEYEDND 598
E + + D+D
Sbjct: 392 EEDDAPDGGDDD 427
>TC231231 weakly similar to UP|Q88TJ4 (Q88TJ4) Cell surface protein, partial
(10%)
Length = 1077
Score = 55.5 bits (132), Expect = 9e-08
Identities = 45/154 (29%), Positives = 70/154 (45%)
Frame = +3
Query: 452 VSVAARSLIGVFREICPSLLVKKDRGRPTNPTARPKAYGEVNIATEVPGAELLHIDSDDE 511
V+ A ++ +G++ + LL +K T P PK + L + D +
Sbjct: 402 VNYAKKTKLGLYA-LGTELLKRKRTENDTTPVPEPKKTSTI-----------LSLPKDSK 545
Query: 512 QESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDDDDDDV 571
S DDS SDD L +D++ SDD +ED+S SDD S D +S DD D
Sbjct: 546 CYSSSGDDS---SSDD---LLSDDSSSDDSSSEDSS--SDDSSSDD----LSSDDSSSDD 689
Query: 572 EVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKS 605
+DD D S+E + + +Y ++ GS +S
Sbjct: 690 SSSDDDSSDPSISNESIKKDEDYAESVGSCSVES 791
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 54.7 bits (130), Expect = 2e-07
Identities = 36/105 (34%), Positives = 54/105 (51%)
Frame = +3
Query: 511 EQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDDDDDD 570
+ E D DD+V G DD + ++ DD E +S DD E++ G SDDDD DD
Sbjct: 279 DTEDDDDDDNVNDGEDDNDDEEDEDFSGDDGGEEADS--DDDPEANGG--GGSDDDDGDD 446
Query: 571 VEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRK 615
E ++D +D ++ DE+ G+ E E++ + SKKRK
Sbjct: 447 DEDDDNDEDDGDEDDEDEGDDDEDEESP---------QPPSKKRK 554
Score = 42.7 bits (99), Expect = 6e-04
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 507 DSDDEQ-ESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDD 565
D+DDE+ E DD D++ GSDDD+ +D D+++ +D + G DD
Sbjct: 327 DNDDEEDEDFSGDDGGEEADSDDDPEANGGGGSDDDDGDD-----DEDDDNDEDDGDEDD 491
Query: 566 DDDDDVEVKEDDLEDSEQ 583
+D+ D +D+ E+S Q
Sbjct: 492 EDEGD----DDEDEESPQ 533
Score = 31.2 bits (69), Expect = 1.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 234 DYEKITGDEDSDDSGSDEELTESPQ 258
D ++ GDED +D G D+E ESPQ
Sbjct: 459 DNDEDDGDEDDEDEGDDDEDEESPQ 533
>TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g47970
{Arabidopsis thaliana;} , partial (39%)
Length = 867
Score = 53.9 bits (128), Expect = 3e-07
Identities = 32/88 (36%), Positives = 43/88 (48%)
Frame = +1
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDD 566
D D+E E D +D G DD DDDE D+EE SD + G DD
Sbjct: 217 DDDNEDEEDDDEDDAPDGGDD-----------DDDE--------DEEEESDVQRGGEPDD 339
Query: 567 DDDDVEVKEDDLEDSEQSDEEVGEVSEY 594
DD+D + +++D ED E+ EE +EY
Sbjct: 340 DDNDDDDEDEDEEDEEEQGEEADLGTEY 423
Score = 45.1 bits (105), Expect = 1e-04
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Frame = +1
Query: 507 DSDDEQESGDSDDSVCSGSDDENQ------------LCTDNTGSDDDEAEDNSVVSDDEE 554
D ++++E D DD+ G DD+++ D+ DDDE ED ++E+
Sbjct: 220 DDNEDEEDDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEE--DEEEQ 393
Query: 555 SSDSEIGVS----------DDDDDDDVEVKEDDLEDSEQSDEEVGEVSE 593
++++G +++ D E +E+ E+ E D+E GE SE
Sbjct: 394 GEEADLGTEYLIRPLVTAEEEEASSDFEPEENGEEEEEDVDDEDGEKSE 540
Score = 38.9 bits (89), Expect = 0.009
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 539 DDDEAEDNSVVSDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDND 598
DDD+ ED +D++ D+ G DDDDD+D E + D E D++ + E ED +
Sbjct: 214 DDDDNEDE----EDDDEDDAPDG-GDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEE 378
Query: 599 GSVE 602
E
Sbjct: 379 DEEE 390
Score = 35.4 bits (80), Expect = 0.098
Identities = 17/64 (26%), Positives = 36/64 (55%)
Frame = +1
Query: 551 DDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKET 610
DD+++ D E DDD+DD + +DD ++ E+ + +V E +D+D + + +E
Sbjct: 214 DDDDNEDEE----DDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEED 381
Query: 611 SKKR 614
+++
Sbjct: 382 EEEQ 393
Score = 29.6 bits (65), Expect = 5.4
Identities = 24/90 (26%), Positives = 38/90 (41%), Gaps = 24/90 (26%)
Frame = +1
Query: 507 DSDDEQESGDSDDSVCSGSD---------------DENQLCTDNTGSDDDEAEDNSVVSD 551
D+DD+ E D +D G + +E + +D ++ E E+ V +
Sbjct: 343 DNDDDDEDEDEEDEEEQGEEADLGTEYLIRPLVTAEEEEASSDFEPEENGEEEEEDVDDE 522
Query: 552 DEESSD-------SEIGVSDDDD--DDDVE 572
D E S+ S+ SDDDD +DD E
Sbjct: 523 DGEKSEAPPKRKRSDKDDSDDDDGGEDDDE 612
Score = 29.6 bits (65), Expect = 5.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 541 DEAEDNSVVSDDEESSDSEIGVSDDDDDDD 570
DE ED S+DE D E DD+DDDD
Sbjct: 125 DEEEDEEYESEDEVVDDGE----DDEDDDD 202
>TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23),
partial (8%)
Length = 581
Score = 53.5 bits (127), Expect = 3e-07
Identities = 36/115 (31%), Positives = 60/115 (51%), Gaps = 7/115 (6%)
Frame = +2
Query: 508 SDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEI------- 560
S++ +++ D++D DD++ + G DDDE +++ D E +DS+
Sbjct: 251 SEENKDASDTEDD-----DDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDDPEANGG 415
Query: 561 GVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRK 615
G SDDDD+DD + +D+ ED D++ + ED D E + T + SKKRK
Sbjct: 416 GESDDDDEDDDDDDDDNDEDDGDEDDD-----DEEDED---EDEETPQPPSKKRK 556
Score = 50.8 bits (120), Expect = 2e-06
Identities = 29/84 (34%), Positives = 42/84 (49%), Gaps = 3/84 (3%)
Frame = +2
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDN---TGSDDDEAEDNSVVSDDEESSDSEIGVS 563
D DD+ + D +D DDE+ D SDDD + SDD++ D +
Sbjct: 284 DDDDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDDPEANGGGESDDDDEDDDD---D 454
Query: 564 DDDDDDDVEVKEDDLEDSEQSDEE 587
DDD+D+D ++DD E+ E DEE
Sbjct: 455 DDDNDEDDGDEDDDDEEDEDEDEE 526
Score = 34.7 bits (78), Expect = 0.17
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 507 DSDDEQES---GDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEES 555
DSDD+ E+ G+SDD DD++ D+ DDD+ ED +DEE+
Sbjct: 383 DSDDDPEANGGGESDDDDEDDDDDDDDNDEDDGDEDDDDEEDE---DEDEET 529
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 52.4 bits (124), Expect = 8e-07
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = -3
Query: 486 PKAYGEVNIATEVPGAELLHIDSDDEQESGDSDDSVCSG-SDDENQLCTDNTGS--DDDE 542
P A GE I +E + D +D++ GD DD G + E +L +++ G ++
Sbjct: 685 PTAKGESKIQSEDKQRDAEGEDGNDDE--GDDDDDGDGGFGEGEEELSSEDGGGYGNNSN 512
Query: 543 AEDNSVVSDD------EESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYED 596
+ NS + + EE+ + + DD DDD E +DD E+ E +EE + +E E+
Sbjct: 511 NKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDGAEDEE 332
Query: 597 NDGSVEAKSTLKETSKKRK 615
N+ E + L+ K++K
Sbjct: 331 NEEDEEDEEALQPPKKRKK 275
>TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 942
Score = 50.8 bits (120), Expect = 2e-06
Identities = 33/113 (29%), Positives = 52/113 (45%)
Frame = +1
Query: 503 LLHIDSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGV 562
LL+ D+ D E GD ++ DD+ D G +D E +++ + G
Sbjct: 361 LLNKDASDSDEDGDEEED-----DDDADDQDDEEGDEDFSGEGEEEADPEDDPEANGAGG 525
Query: 563 SDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRK 615
SD D DDD + +DD +D+ D E E E ED + + + + +KKRK
Sbjct: 526 SDSDGDDDDDGGDDDDDDNGDDDGEDEEEGEDEDEE---DEEDVPQPPAKKRK 675
Score = 32.7 bits (73), Expect = 0.63
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +1
Query: 497 EVPGAELLHIDSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESS 556
E GA D DD+ + GD DD D+ G DD E E+ D+E+
Sbjct: 505 EANGAGGSDSDGDDDDDGGDDDD--------------DDNGDDDGEDEEEGEDEDEEDEE 642
Query: 557 D 557
D
Sbjct: 643 D 645
Score = 32.3 bits (72), Expect = 0.83
Identities = 19/64 (29%), Positives = 32/64 (49%)
Frame = +1
Query: 540 DDEAEDNSVVSDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDG 599
DD + ++++SDS+ +++DDDD DD +D E ++ GE E D +
Sbjct: 331 DDLCKGKHTYLLNKDASDSDEDGDEEEDDDDA----DDQDDEEGDEDFSGEGEEEADPED 498
Query: 600 SVEA 603
EA
Sbjct: 499 DPEA 510
>TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23), partial
(7%)
Length = 735
Score = 49.7 bits (117), Expect = 5e-06
Identities = 33/107 (30%), Positives = 51/107 (46%), Gaps = 1/107 (0%)
Frame = +3
Query: 510 DEQESGDSDDSVCSGSDDENQLCTDNTGSDDD-EAEDNSVVSDDEESSDSEIGVSDDDDD 568
+ + S DD DDE+ D+ G D++ E+ D E+ ++ G SDDDDD
Sbjct: 318 ENKNSETEDDDKDGDEDDEDGHDQDDDGEDEEFSGEEGDEEGDPEDDPEANGGGSDDDDD 497
Query: 569 DDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRK 615
D+ D+ ED + ++E E E ED + T + +KKRK
Sbjct: 498 DN-----DNEEDDDDGEDEEEEEDEEEDEE------ETSQPPTKKRK 605
Score = 48.5 bits (114), Expect = 1e-05
Identities = 26/87 (29%), Positives = 49/87 (55%), Gaps = 7/87 (8%)
Frame = +3
Query: 507 DSDDEQESGDSDDSVCSGSDD--ENQLCTDNTGSDDDEAEDNSVVS-----DDEESSDSE 559
+++D+ + GD DD DD E++ + G ++ + ED+ + DD++ +D+E
Sbjct: 333 ETEDDDKDGDEDDEDGHDQDDDGEDEEFSGEEGDEEGDPEDDPEANGGGSDDDDDDNDNE 512
Query: 560 IGVSDDDDDDDVEVKEDDLEDSEQSDE 586
DDDD +D E +ED+ ED E++ +
Sbjct: 513 ---EDDDDGEDEEEEEDEEEDEEETSQ 584
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 47.0 bits (110), Expect = 3e-05
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Frame = -1
Query: 509 DDEQESGDSDDSVCSG-SDDENQLCTDNTGSDDDE-----------------AEDNSVVS 550
D + GD DD G + E +L +++ G + AE+N
Sbjct: 589 DGNDDEGDDDDDGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEENGEED 410
Query: 551 DDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKE 609
+DE+ D + DDDDDDD E + + ED + +++E E E ++ + +++ K+
Sbjct: 409 EDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEEALQPPKKRKK 233
Score = 43.5 bits (101), Expect = 4e-04
Identities = 21/77 (27%), Positives = 41/77 (52%)
Frame = -1
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDD 566
+S+++ S + + G+++ + D G D D+ ED+ DD++ + E G +D+
Sbjct: 487 NSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDEDD---DDDDDDEEDEGGEEEDE 317
Query: 567 DDDDVEVKEDDLEDSEQ 583
D + E E+D ED E+
Sbjct: 316 DGAEDEENEEDEEDEEE 266
Score = 38.1 bits (87), Expect = 0.015
Identities = 29/120 (24%), Positives = 54/120 (44%), Gaps = 14/120 (11%)
Frame = -1
Query: 507 DSDDEQESG--------DSDDSVCSGSDDENQLCTDNT------GSDDDEAEDNSVVSDD 552
D DD+ + G S+D G++ N+ + G++++ ED DD
Sbjct: 568 DDDDDGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDD 389
Query: 553 EESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSK 612
++ + + DDDDD++ E E++ ED + +E +E ++ D EA K+ K
Sbjct: 388 QDDDEDD---DDDDDDEEDEGGEEEDEDGAEDEE-----NEEDEEDEEEEALQPPKKRKK 233
Score = 32.3 bits (72), Expect = 0.83
Identities = 19/71 (26%), Positives = 33/71 (45%)
Frame = -1
Query: 500 GAELLHIDSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSE 559
GAE + +DE DD DD++ DDD+ ED +DE+ ++ E
Sbjct: 436 GAEENGEEDEDEDGDDQDDD-----EDDDD---------DDDDEEDEGGEEEDEDGAEDE 299
Query: 560 IGVSDDDDDDD 570
D++D+++
Sbjct: 298 ENEEDEEDEEE 266
>TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 857
Score = 46.2 bits (108), Expect = 6e-05
Identities = 26/77 (33%), Positives = 37/77 (47%)
Frame = +1
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDD 566
D D++ E G +D DDE + D E E N SDD + D D++
Sbjct: 382 DGDEDDEDGPDEDE---DGDDEEFSGEEGDEGGDPEDEANGEGSDDGDEDDDGDDNGDEE 552
Query: 567 DDDDVEVKEDDLEDSEQ 583
DDDD E +E+D E+ E+
Sbjct: 553 DDDDGEDEEEDEEEDEE 603
Score = 44.7 bits (104), Expect = 2e-04
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 510 DEQESGDSDDSVCSGSD-DENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDDDD 568
+++E GD DD G D DE+ + +G + DE D D+ S+ G DDD D
Sbjct: 370 EDEEDGDEDDE--DGPDEDEDGDDEEFSGEEGDEGGD---PEDEANGEGSDDGDEDDDGD 534
Query: 569 DDVEVKEDDLEDSEQSDEEVGE 590
D+ + ++DD + E+ DEE E
Sbjct: 535 DNGDEEDDDDGEDEEEDEEEDE 600
Score = 44.3 bits (103), Expect = 2e-04
Identities = 27/81 (33%), Positives = 35/81 (42%)
Frame = +1
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDD 566
D D E D DD SG + D G +DEA DE+ + G +DD
Sbjct: 397 DEDGPDEDEDGDDEEFSGEEG------DEGGDPEDEANGEGSDDGDEDDDGDDNGDEEDD 558
Query: 567 DDDDVEVKEDDLEDSEQSDEE 587
DD ED+ ED E+ +EE
Sbjct: 559 DDG-----EDEEEDEEEDEEE 606
Score = 43.5 bits (101), Expect = 4e-04
Identities = 24/87 (27%), Positives = 44/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 511 EQESGDSDDSVCSGSDDENQLCTDNTGSDDD-EAEDNSVVSDDEESSDSEIGVSDDDDDD 569
+ ++ +++D DDE+ D G D++ E+ D E+ ++ E G D D+DD
Sbjct: 349 QNKNSETEDEEDGDEDDEDGPDEDEDGDDEEFSGEEGDEGGDPEDEANGE-GSDDGDEDD 525
Query: 570 DVEVKEDDLEDSEQSDEEVGEVSEYED 596
D + D+ +D + DEE E + E+
Sbjct: 526 DGDDNGDEEDDDDGEDEEEDEEEDEEE 606
>TC218463
Length = 895
Score = 45.8 bits (107), Expect = 7e-05
Identities = 28/81 (34%), Positives = 45/81 (54%)
Frame = +3
Query: 540 DDEAEDNSVVSDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDG 599
D +A+DNSVVS +E+ SEI ++D V E+ +D E S+ + + +E E+N+G
Sbjct: 162 DQQAKDNSVVSKTDENPHSEI----TSGENDQMVTENVGDDEENSETKEAKETESEENNG 329
Query: 600 SVEAKSTLKETSKKRKFADFN 620
E K T E K++ F+
Sbjct: 330 MKEGKVTEGEDKKRQAGGKFS 392
>BE822052 similar to GP|4557063|gb|A expressed protein {Arabidopsis
thaliana}, partial (28%)
Length = 668
Score = 45.4 bits (106), Expect = 9e-05
Identities = 31/112 (27%), Positives = 58/112 (51%)
Frame = -1
Query: 504 LHIDSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVS 563
L+ D+ D E D +D + ++ + D +G ++EA+ DD E++ + G S
Sbjct: 539 LNKDASDSDEDEDEEDDHDTNDQNDEEGDEDFSGEGEEEADPE----DDPEANGA--GGS 378
Query: 564 DDDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRK 615
+DDDD D EDD +D++ D+ GE + ++ + + + + +KKRK
Sbjct: 377 NDDDDSD----EDDDDDNDGDDD--GEDEDEKEGEDEEDEEEVPQPPTKKRK 240
>TC210776 similar to UP|Q8H6B1 (Q8H6B1) Global transcription factor group C
102, partial (12%)
Length = 411
Score = 45.4 bits (106), Expect = 9e-05
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Frame = +1
Query: 529 NQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSD--------DDDDDDVEVKEDDLED 580
N TD+ + +E++ SD E SDSE SD DDDDDD + +ED E+
Sbjct: 76 NLEATDSESENSEESDKGYEPSDVEPESDSEDEASDSESLVESEDDDDDDEDSEEDSEEE 255
Query: 581 SEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRKFADF 619
++ EE+ + D + E+ S +E K+RK F
Sbjct: 256 KGKTWEELEREASNADREKGNESDS--EEDRKRRKAKSF 366
>TC218462
Length = 1117
Score = 44.7 bits (104), Expect = 2e-04
Identities = 38/132 (28%), Positives = 59/132 (43%), Gaps = 10/132 (7%)
Frame = +1
Query: 540 DDEAEDNSVVSDDEESSDSEIGVSDDD---------DDDDVEVKE-DDLEDSEQSDEEVG 589
D +A+DNSVVS +E+ SEI ++D D++ E+KE + + E ++ +
Sbjct: 247 DQQAKDNSVVSKTDENPRSEITSGENDQKVTENVGVDEEKNEMKEAKETVNEEDNEMKEA 426
Query: 590 EVSEYEDNDGSVEAKSTLKETSKKRKFADFNGTLTAADTSLQALKKLTGTTTGQALPESE 649
E +E EDN EAK T E D NG T + K+ G A +
Sbjct: 427 EETESEDNTDMKEAKGTESE--------DNNGMKEGKVTKDEEKKQQAGEKFSAAAYKDN 582
Query: 650 DGFLSNEDFQRI 661
+S ED + +
Sbjct: 583 MDVVSREDLKSV 618
>TC219459 similar to GB|AAO63318.1|28950789|BT005254 At5g30145 {Arabidopsis
thaliana;} , partial (14%)
Length = 547
Score = 44.3 bits (103), Expect = 2e-04
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Frame = +1
Query: 550 SDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSD---EEVGE-VSEYEDNDGSVEAKS 605
S D ++ S V + +EVK+DD E Q D E++ + VS N + + S
Sbjct: 10 SADTFNASSAESVKEPVIGSSLEVKQDDAEIKAQVDAMWEQMNKGVSNKTLNKFTSKPNS 189
Query: 606 TLKETSKKRKFADFNGTLTAADTSLQALKKLTGTTTGQALPESEDGFLSNEDFQRIKKLK 665
T K+T+KK +++ L A T+ ++L GQ ++ G L + +KKL
Sbjct: 190 TSKKTAKKSS-SNWMSYLGLAPTATESL--------GQGASKNGPGVLQSSTSDEVKKLA 342
Query: 666 AKNEARNALAQHGLAIKVPSSDQLSLKRV-DGAALEVHVKKKMNKEERLALVRA 718
A A A + AI S +L + V D A ++ VKK ++ + + A+ RA
Sbjct: 343 A---AALAAVKDDAAIAASSRGKLVITEVRDFAGQDIEVKKLVDSDSKEAMERA 495
>CF922292
Length = 722
Score = 43.5 bits (101), Expect = 4e-04
Identities = 24/79 (30%), Positives = 39/79 (48%)
Frame = -2
Query: 507 DSDDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDD 566
DSD+ Q+ DSD+S DE++ SD E+E S + E+ SDS+ +
Sbjct: 223 DSDESQQKSDSDESQQKSDSDESE-----KKSDSAESEKKSDSDESEKKSDSDETEKSSE 59
Query: 567 DDDDVEVKEDDLEDSEQSD 585
+D+ + D+ E+ SD
Sbjct: 58 SNDNKQFDSDERENKSDSD 2
>TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)
Length = 1005
Score = 43.1 bits (100), Expect = 5e-04
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 15/281 (5%)
Frame = +3
Query: 511 EQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAED--NSVVSDDEESSDSE-IGVSDDDD 567
++E+ D D +D E +N G DD+E ++ D + +D+E I +DD
Sbjct: 51 KKENKDKGDK----TDVEKVKGKENDGEDDEEKKEKKKKEKKDKDGKTDAEKIKKKEDDG 218
Query: 568 DDDVEVKE-----DDLE-------DSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRK 615
DD E KE D ++ + + DE E + E DG E K K+ K++K
Sbjct: 219 KDDEEKKEKKKKYDKIDAXKVKGKEDDGKDEGNKEKKDKEKGDGDGEEKKEKKDKEKEKK 398
Query: 616 FADFNGTLTAADTSLQALKKLTGTTTGQALPESEDGFLSNEDFQRIKKLKAKNEARNALA 675
+ DT + K G + +D +D ++ KK K + E
Sbjct: 399 -KEKKDKDEETDTLKEKGKNDEGEDDEGNKKKKKDKKEKEKDHKKEKKDKEEGE------ 557
Query: 676 QHGLAIKVPSSDQLSLKRVDGAALEVHVKKKMNKEERLALVRAGREDRGKYCARTAVKQK 735
K S ++S++ +D +E +KK+ KE++ +D GK VK+K
Sbjct: 558 ------KEDSKVEVSVRDID---IE-EIKKEGEKEDK-------GKDGGK-----EVKEK 671
Query: 736 KTGGLSNRQKEHKKKMPLAAKRYKVAKSKTEKRKQQQRAGK 776
K K+ K+K + K T K+K ++ GK
Sbjct: 672 K----KKEDKDKKEKKKKVTGKDKTKDLSTLKQKLEKINGK 782
Score = 30.8 bits (68), Expect = 2.4
Identities = 22/73 (30%), Positives = 38/73 (51%)
Frame = +3
Query: 704 KKKMNKEERLALVRAGREDRGKYCARTAVKQKKTGGLSNRQKEHKKKMPLAAKRYKVAKS 763
KK+ +K+E+ + +D+G VK K+ G + +K+ KKK K+ K K+
Sbjct: 21 KKEKDKKEKK---KKENKDKGDKTDVEKVKGKENDGEDDEEKKEKKK---KEKKDKDGKT 182
Query: 764 KTEKRKQQQRAGK 776
EK K+++ GK
Sbjct: 183 DAEKIKKKEDDGK 221
>TC207527 weakly similar to UP|O08661 (O08661) Ryanodine receptor type II
(Fragment), partial (4%)
Length = 981
Score = 43.1 bits (100), Expect = 5e-04
Identities = 30/104 (28%), Positives = 48/104 (45%), Gaps = 4/104 (3%)
Frame = +1
Query: 509 DDEQESGDSDDS-VCSGSDDENQLCTDNTGSDDD---EAEDNSVVSDDEESSDSEIGVSD 564
DDEQE D S V D+ + ++ T D + +D V ++E SS+ E V
Sbjct: 490 DDEQEKDDVKKSPVKRQKGDDPSVKSEPTNMDTSNPTQVDDEKAVVENENSSNKEDDVKM 669
Query: 565 DDDDDDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLK 608
+D D+ E E+D E+ E+ + + DN+ E K+ K
Sbjct: 670 EDGSDEEEDPEEDPEEYEEMENGSPQHEASHDNNAEQEVKADTK 801
Score = 29.3 bits (64), Expect = 7.0
Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Frame = +1
Query: 509 DDEQESGDSDDSVCSGSDDENQLCTDNTGSDDDEAEDNSVVSDDEESSDSEIGVSDDDDD 568
DDE+ ++++S S +D+ ++ GSD++E + +E + S + D++
Sbjct: 607 DDEKAVVENENS--SNKEDDVKM---EDGSDEEEDPEEDPEEYEEMENGSPQHEASHDNN 771
Query: 569 DDVEVKEDDLEDS---------EQSDEEVGEVSEYEDN--DGSVEAKSTLKETSKK 613
+ EVK D ++ E S EE+ E +++ D V+ + K+ +KK
Sbjct: 772 AEQEVKADTKSENITTNNKTTDETSKEEIKVKDEVQESKADAQVKEEKEGKDDTKK 939
>TC213605 weakly similar to UP|RN12_HUMAN (Q9NVW2) RING finger protein 12
(LIM domain interacting RING finger protein) (RING
finger LIM domain-binding protein) (R-LIM) (NY-REN-43
antigen), partial (6%)
Length = 704
Score = 42.7 bits (99), Expect = 6e-04
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Frame = -3
Query: 490 GEVNIATEVPGAELLHI-DSDDEQESGDSD---DSVCSGSDDENQLCTDNTGSDDDEAED 545
GEV+ E E+ ++ DS D DSD D + +D+E++ D G D +
Sbjct: 684 GEVDGGDESDNEEIENLLDSTDPTLGPDSDYDYDDLDEVADEEDE---DLIGDVSDAEMN 514
Query: 546 NSVVSDDEESSDSEIGVSDDDDDDDVEVKEDDLEDSEQSDEE----------------VG 589
+ SD EE E+ S DDDD ++++ D++D+ DEE V
Sbjct: 513 MDIPSDMEEE---EVDASPPDDDD-IDIQVGDVDDASDGDEEEAGKRKRKHESGGKKGVS 346
Query: 590 EVSEYE------DNDGSVEAKSTLKET-SKKRK 615
+ YE ++D E KS K+T SKKRK
Sbjct: 345 PFASYEEFEHLMEDDDHAEKKSYPKKTKSKKRK 247
>TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (24%)
Length = 808
Score = 42.0 bits (97), Expect = 0.001
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +1
Query: 510 DEQESGDSDDSVCSGSDDENQLCTDNTGSDDDE-AEDNSVVSDDEESSDSEIGVSDDDDD 568
+E + +S +V S Q+ D++E ++D+S DD SSD E+ +D D D
Sbjct: 82 EELKVPESKKAVAKASASAKQVKIVEPKKDNEEDSDDDSDEDDDFGSSDEEMEDADSDSD 261
Query: 569 DDVEVKEDDLEDSEQSDEEVGEVSEYEDNDGSVEAKSTLKETSKKRKFA 617
D+ + KEDD E++ +++ ++ + N E+ S +SKK K A
Sbjct: 262 DESDDKEDDDEETHPKNKK-ADLGKKRPN----ESASKTPVSSKKAKNA 393
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.131 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,721,776
Number of Sequences: 63676
Number of extensions: 358976
Number of successful extensions: 4437
Number of sequences better than 10.0: 254
Number of HSP's better than 10.0 without gapping: 2395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3235
length of query: 786
length of database: 12,639,632
effective HSP length: 105
effective length of query: 681
effective length of database: 5,953,652
effective search space: 4054437012
effective search space used: 4054437012
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0060.8