BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0060.14
(651 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC211561 weakly similar to UP|O22675 (O22675) Reverse transcript... 327 1e-89
CO982349 255 5e-68
BI972659 149 5e-36
AW757033 147 1e-35
TC213164 143 3e-34
AI496436 128 3e-30
BE329487 weakly similar to PIR|T14619|T146 reverse transcriptase... 124 1e-28
TC216314 similar to GB|AAP68269.1|31711826|BT008830 At1g70320 {A... 110 2e-24
BI321779 109 3e-24
TC233727 similar to UP|Q9FKH8 (Q9FKH8) Similarity to non-LTR ret... 73 8e-22
TC218847 91 1e-18
TC212055 83 3e-16
CD417230 weakly similar to GP|2244915|emb| reverse transcriptase... 62 7e-16
CA783280 weakly similar to PIR|T01871|T01 RNA-directed DNA polym... 82 1e-15
BM891241 71 2e-12
TC206673 70 2e-12
TC234193 66 4e-11
CF922212 62 8e-10
BU762692 62 1e-09
BM891637 60 4e-09
>TC211561 weakly similar to UP|O22675 (O22675) Reverse transcriptase
(Fragment) , partial (59%)
Length = 1077
Score = 327 bits (837), Expect = 1e-89
Identities = 155/304 (50%), Positives = 214/304 (69%)
Frame = +1
Query: 314 LDSVVVLNEVIHEVKRKKQPSIIFKVDYEKAYDTVDWSFLEYMMGRMNFCSKWISWIMGC 373
L S ++ NEVI E KR + ++FKVDYEKAYD+V W+FL YMM RM+F KWI WI C
Sbjct: 1 LHSALIANEVIDEAKRSNKSCLVFKVDYEKAYDSVSWNFLMYMMWRMDFSPKWIKWIEEC 180
Query: 374 LRSASVSVLVNGSPTGEFKMERGLRQGDPLAPFLFLFVAEGLNGLFQNSVRLSKFKGVKV 433
++SAS+SVLVNGSPT EF +RGLRQGDPL PFLF VAEGLNGL + +V + +K V
Sbjct: 181 VKSASISVLVNGSPTAEFLPQRGLRQGDPLTPFLFNIVAEGLNGLMRRAVEENLYKPYLV 360
Query: 434 GADTGLEVSLLQFADDTVFLGEATIQNLVSLKCILRCFELVSGLKVNFHKSKLAAIAIET 493
GA+ G+ +S+LQ+ADDT+F GEA +N+ ++K ILR FELVS L++NF KS +
Sbjct: 361 GAN-GVPISILQYADDTIFFGEAAKENVEAIKVILRSFELVSNLRINFAKSCFGVFGVTD 537
Query: 494 GVAHQFASFLNCKVMTIPFVYLGIPVGARASCLKTWEPVIKKMRNRLALWKQKLISFGGR 553
+ A++L+C ++ PF+YLGIP+GA + W+ +I+K +L+ WK + ISFGGR
Sbjct: 538 QWKQEAANYLHCSLLAFPFIYLGIPIGANSRRCHMWDSIIRKCERKLSKWK*RHISFGGR 717
Query: 554 ICLIQSVLSALPLIFLSFFRIPACVVKVCNRIMRDFLWGASDGGKRIAWVKWLDVCQPKD 613
+ LI+SVL+++P+ F SFFR+P VV +I R FLWG K+I+W++W +C PK+
Sbjct: 718 VTLIKSVLTSIPIYFFSFFRVPQSVVDKLVKI*RTFLWGGGPDQKKISWIRWEKLCLPKE 897
Query: 614 VGGL 617
GG+
Sbjct: 898 RGGI 909
>CO982349
Length = 795
Score = 255 bits (651), Expect = 5e-68
Identities = 128/243 (52%), Positives = 164/243 (66%)
Frame = +3
Query: 369 WIMGCLRSASVSVLVNGSPTGEFKMERGLRQGDPLAPFLFLFVAEGLNGLFQNSVRLSKF 428
WI GCL SASVS+LVN SP EF +RGLRQGDPLAP LF VAEGL GL + +V +F
Sbjct: 69 WIRGCLHSASVSILVNESPINEFSPQRGLRQGDPLAPLLFNIVAEGLTGLMREAVDRKRF 248
Query: 429 KGVKVGADTGLEVSLLQFADDTVFLGEATIQNLVSLKCILRCFELVSGLKVNFHKSKLAA 488
VG + VS+LQ+ADDT+F EAT++N+ +K ILRCFEL SGLK+NF +S+ A
Sbjct: 249 NSFLVGKNKE-PVSILQYADDTIFFEEATMENMKVIKTILRCFELASGLKINFAESRFGA 425
Query: 489 IAIETGVAHQFASFLNCKVMTIPFVYLGIPVGARASCLKTWEPVIKKMRNRLALWKQKLI 548
I + A FLNC ++++PF YLGIP+ A C + +P+I+K +LA WKQ+ I
Sbjct: 426 IWKPDHWCKEAAEFLNCSMLSMPFSYLGIPIEANPRCREI*DPIIRKCETKLARWKQRHI 605
Query: 549 SFGGRICLIQSVLSALPLIFLSFFRIPACVVKVCNRIMRDFLWGASDGGKRIAWVKWLDV 608
S GGR+ LI ++L+ALP+ F SFFR P+ VV+ I R FLWG +RIAWVKW V
Sbjct: 606 SLGGRVTLINAILTALPIYFFSFFRAPSKVVQKLVNIQRKFLWGGGSXQRRIAWVKWETV 785
Query: 609 CQP 611
C P
Sbjct: 786 CLP 794
>BI972659
Length = 453
Score = 149 bits (375), Expect = 5e-36
Identities = 68/151 (45%), Positives = 100/151 (66%)
Frame = +1
Query: 453 LGEATIQNLVSLKCILRCFELVSGLKVNFHKSKLAAIAIETGVAHQFASFLNCKVMTIPF 512
+GEA+ N++ LK +LR FE+VSGL++N+ KS+ + + AH A LNC+ + IPF
Sbjct: 1 VGEASWDNIIVLKSMLRGFEMVSGLRINYAKSQFGIVGFQPNWAHDAAQLLNCRQLDIPF 180
Query: 513 VYLGIPVGARASCLKTWEPVIKKMRNRLALWKQKLISFGGRICLIQSVLSALPLIFLSFF 572
YLG+P+ +AS WEP+I K + +L+ W QK +S GGR+ LI+SVL+ALP+ LSFF
Sbjct: 181 HYLGMPIAVKASSRMVWEPLINKFKAKLSKWNQKYLSMGGRVTLIKSVLNALPIYLLSFF 360
Query: 573 RIPACVVKVCNRIMRDFLWGASDGGKRIAWV 603
+IP +V + R F+WG + RI+WV
Sbjct: 361 KIPQRIVDKLVSLQRTFMWGGNQHHNRISWV 453
>AW757033
Length = 441
Score = 147 bits (371), Expect = 1e-35
Identities = 74/147 (50%), Positives = 100/147 (67%)
Frame = -2
Query: 388 TGEFKMERGLRQGDPLAPFLFLFVAEGLNGLFQNSVRLSKFKGVKVGADTGLEVSLLQFA 447
T EF RGLRQGDPLAP LF AEGL GL + +V + +K VG VS+LQ+A
Sbjct: 440 TREFSPHRGLRQGDPLAPLLFNIAAEGLTGLMREAVARNHYKSFAVGKYKK-PVSILQYA 264
Query: 448 DDTVFLGEATIQNLVSLKCILRCFELVSGLKVNFHKSKLAAIAIETGVAHQFASFLNCKV 507
DDT+F GEAT++N+ +K ILR FEL SGLK+NF KS+ AI++ + A F+NC +
Sbjct: 263 DDTIFFGEATMENVRVIKTILRGFELASGLKINFAKSRFGAISVPD*WRKEAAEFMNCSL 84
Query: 508 MTIPFVYLGIPVGARASCLKTWEPVIK 534
+++PF YLGIP+GA +TW+P+I+
Sbjct: 83 LSLPFSYLGIPIGANPRRRETWDPIIR 3
>TC213164
Length = 446
Score = 143 bits (360), Expect = 3e-34
Identities = 64/137 (46%), Positives = 98/137 (70%)
Frame = +3
Query: 188 NSVLIGPMDEVEIKDAVWACGGNKSPGPDGFNFRFIKQFWDVLKGDVIKAVREFWRRGAW 247
+ +L+ ++ E++ +W G KSPGPDG NF+FIK+FWD+LK D+++ + EF+ G +
Sbjct: 9 SDLLVARFEKKEVRATMWDRGNAKSPGPDGLNFKFIKEFWDILKTDLLRFLDEFYANGVF 188
Query: 248 SRGCNASFIVLIPKVNSPQPLNEFRPISLIGCIYKVISKLLATRLSTVVGKVIDERQFAF 307
+ NA F+ LIPKV+ P LNE++PISLIGCIYK+++KLL+ R V+ +IDERQ F
Sbjct: 189 LKRSNAFFLALIPKVHDP*SLNEYKPISLIGCIYKIVAKLLSGRHKKVLPTIIDERQTVF 368
Query: 308 VGNRNMLDSVVVLNEVI 324
+ R+ L +VV+ NE++
Sbjct: 369 MEGRHTLHNVVIANEIM 419
>AI496436
Length = 414
Score = 128 bits (321), Expect(2) = 3e-30
Identities = 63/113 (55%), Positives = 79/113 (69%)
Frame = +1
Query: 467 ILRCFELVSGLKVNFHKSKLAAIAIETGVAHQFASFLNCKVMTIPFVYLGIPVGARASCL 526
ILRCFEL SGLK+NF KS+ I + A +LN V+++PFVYLGIP+GA +
Sbjct: 4 ILRCFELSSGLKINFAKSQFGTICKSDIWRKEAADYLNSSVLSMPFVYLGIPIGANSRHS 183
Query: 527 KTWEPVIKKMRNRLALWKQKLISFGGRICLIQSVLSALPLIFLSFFRIPACVV 579
WEPV++K +LA WKQK +SFGGR+ LI SVL+ALP+ LSFFRIP VV
Sbjct: 184 DVWEPVVRKCERKLASWKQKYVSFGGRVTLINSVLTALPIYLLSFFRIPDKVV 342
Score = 22.7 bits (47), Expect(2) = 3e-30
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 585 IMRDFLWGASDGGKRIAW 602
I R FLWG ++IAW
Sbjct: 359 IQRRFLWGGDLE*RKIAW 412
>BE329487 weakly similar to PIR|T14619|T146 reverse transcriptase - beet
retrotransposon (fragment), partial (15%)
Length = 376
Score = 124 bits (312), Expect = 1e-28
Identities = 55/88 (62%), Positives = 68/88 (76%)
Frame = -2
Query: 200 IKDAVWACGGNKSPGPDGFNFRFIKQFWDVLKGDVIKAVREFWRRGAWSRGCNASFIVLI 259
IK AVW CG KSPGPDG NF+FIK FW+ LK D+I+ + EF G + +G NASFI LI
Sbjct: 375 IKSAVWQCGSVKSPGPDGLNFKFIKHFWERLKPDIIRFLNEFHANGIFPKGGNASFIALI 196
Query: 260 PKVNSPQPLNEFRPISLIGCIYKVISKL 287
PKV PQ LN+FRPISLIGC+YK+++K+
Sbjct: 195 PKVKHPQALNDFRPISLIGCVYKIVAKI 112
>TC216314 similar to GB|AAP68269.1|31711826|BT008830 At1g70320 {Arabidopsis
thaliana;} , partial (18%)
Length = 759
Score = 110 bits (275), Expect = 2e-24
Identities = 50/98 (51%), Positives = 64/98 (65%)
Frame = +2
Query: 551 GGRICLIQSVLSALPLIFLSFFRIPACVVKVCNRIMRDFLWGASDGGKRIAWVKWLDVCQ 610
GGR+ LI+SVLSALP+ LSFF+IP +V + R FLWG + RI WVKW D+C
Sbjct: 5 GGRVTLIKSVLSALPIXXLSFFKIPQRIVDKLVTLQRQFLWGGTQHHNRIPWVKWADICN 184
Query: 611 PKDVGGLGIKDLDLFNRSLLGKWLWRWRTKKQALWCQV 648
PK GGLGIKDL FN +L G+W+W + LW ++
Sbjct: 185 PKIDGGLGIKDLSNFNAALRGRWIWGLASNHNQLWARL 298
>BI321779
Length = 421
Score = 109 bits (273), Expect = 3e-24
Identities = 52/122 (42%), Positives = 78/122 (63%)
Frame = +2
Query: 165 FKSDV*DRPRLEGVPFKTLSDSDNSVLIGPMDEVEIKDAVWACGGNKSPGPDGFNFRFIK 224
F+ + RP+L GV F + S+ DN++LI + EIK + C +KSPGPDG++ IK
Sbjct: 5 FQEQIYGRPKLNGVEFLSFSNEDNAMLIQDFEVEEIKKVI*DCESSKSPGPDGYSLLLIK 184
Query: 225 QFWDVLKGDVIKAVREFWRRGAWSRGCNASFIVLIPKVNSPQPLNEFRPISLIGCIYKVI 284
FW+V+K +VI +EF + RG N SFI LI K ++P + ++ PISL+GC+YK++
Sbjct: 185 IFWEVIKEEVINFFKEFHKFDFLPRGTNRSFIALIAKCDNPLDIGQYCPISLVGCLYKIV 364
Query: 285 SK 286
K
Sbjct: 365 *K 370
>TC233727 similar to UP|Q9FKH8 (Q9FKH8) Similarity to non-LTR retroelement
reverse transcriptase, partial (7%)
Length = 956
Score = 72.8 bits (177), Expect(2) = 8e-22
Identities = 37/95 (38%), Positives = 58/95 (60%), Gaps = 1/95 (1%)
Frame = -3
Query: 315 DSVVVLNEVIHEVKRKK-QPSIIFKVDYEKAYDTVDWSFLEYMMGRMNFCSKWISWIMGC 373
D V +EVI+ + +K ++ K+D KA+DT+D FL ++ + + + +WI
Sbjct: 828 DCTCVTSEVINMLDKKVFGGNLALKIDIVKAFDTLDRDFLISVLNKFGYSHTFCNWIRVI 649
Query: 374 LRSASVSVLVNGSPTGEFKMERGLRQGDPLAPFLF 408
L SA +S+ VNG P G F +RG+RQGDPL+P L+
Sbjct: 648 LLSAKLSISVNGEPVGFFSCQRGVRQGDPLSPSLY 544
Score = 49.7 bits (117), Expect(2) = 8e-22
Identities = 35/131 (26%), Positives = 61/131 (45%)
Frame = -2
Query: 442 SLLQFADDTVFLGEATIQNLVSLKCILRCFELVSGLKVNFHKSKLAAIAIETGVAHQFAS 501
S + ADD + + T +N+ +L + ++ G ++ HKSK+ +I +
Sbjct: 451 SHVMHADDIMIFCKGTSRNVHNLINFFQLYKDSFGQVISKHKSKIFIGSIPGQRLRVISD 272
Query: 502 FLNCKVMTIPFVYLGIPVGARASCLKTWEPVIKKMRNRLALWKQKLISFGGRICLIQSVL 561
L IPF Y G+P+ + V K++ +LA WK ++S GRI L+ SV+
Sbjct: 271 LLQYFHSDIPFNYFGVPIFKGKPTRRHLYCVADKIKCKLASWKGSILSIMGRIQLVNSVI 92
Query: 562 SALPLIFLSFF 572
+ L S +
Sbjct: 91 HGMLLYSFSVY 59
>TC218847
Length = 521
Score = 91.3 bits (225), Expect = 1e-18
Identities = 42/94 (44%), Positives = 61/94 (64%)
Frame = -3
Query: 95 WTVLRHHESLLCQKARSRWLAEGDQNSGFFHSTINWKRRTNSIVGLWVEGVWEEDPSRVK 154
WT + HESLL QKAR++W+ E D NS +FH IN+ RTN++ G+ + G W E+P+RVK
Sbjct: 282 WTAAQAHESLLRQKARTKWIRERDCNSSYFHKLINYIHRTNAVNGVMIGGSWVEEPNRVK 103
Query: 155 AAVESFFEAKFKSDV*DRPRLEGVPFKTLSDSDN 188
AV +FF+ +F DRP + G F+++ N
Sbjct: 102 -AVRNFFQIRFSESDYDRP*INGANFRSIGQQQN 4
>TC212055
Length = 776
Score = 83.2 bits (204), Expect = 3e-16
Identities = 42/83 (50%), Positives = 61/83 (72%)
Frame = +1
Query: 407 LFLFVAEGLNGLFQNSVRLSKFKGVKVGADTGLEVSLLQFADDTVFLGEATIQNLVSLKC 466
LF VAEGL GL + ++ S + + VG + + V++LQ+ADDT+FLGEAT+QN++++K
Sbjct: 1 LFNIVAEGLTGLMREALDKSLYSSLMVGKNK-IPVNILQYADDTIFLGEATMQNVMTIKS 177
Query: 467 ILRCFELVSGLKVNFHKSKLAAI 489
+LR FEL SGLK++F KS AI
Sbjct: 178 MLRVFELASGLKIHFAKSSFGAI 246
>CD417230 weakly similar to GP|2244915|emb| reverse transcriptase like
protein {Arabidopsis thaliana}, partial (7%)
Length = 688
Score = 61.6 bits (148), Expect(2) = 7e-16
Identities = 37/113 (32%), Positives = 57/113 (49%)
Frame = -3
Query: 373 CLRSASVSVLVNGSPTGEFKMERGLRQGDPLAPFLFLFVAEGLNGLFQNSVRLSKFKGVK 432
C+ + ++S+L NG F G+RQ DP+AP+LF+ E L+ L + + ++
Sbjct: 668 CMSTTTMSLLWNGEVLDHFSPNIGVRQRDPIAPYLFVLCLERLSHLINLVMNKKL*RSIQ 489
Query: 433 VGADTGLEVSLLQFADDTVFLGEATIQNLVSLKCILRCFELVSGLKVNFHKSK 485
V GL +S L F DD + EA + + + L F SG KVN K+K
Sbjct: 488 VNRG-GLLISHLAFVDDLILFVEANMDQVDVINLTLELFSDSSGAKVNVDKTK 333
Score = 40.8 bits (94), Expect(2) = 7e-16
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = -2
Query: 514 YLGIPVGARASCLKTWEPVIKKMRNRLALWKQKLISFGGRICLIQSVLSALPLIFLSF 571
YLG+P+ + T++ +I K+ R + WK L+S GR+ L + V+ ALP + F
Sbjct: 243 YLGVPIFHKNPTSHTFDFIIDKVNKRFSRWKSNLLSMVGRLTLTK*VV*ALPSHIMQF 70
>CA783280 weakly similar to PIR|T01871|T01 RNA-directed DNA polymerase
homolog T24M8.8 - Arabidopsis thaliana, partial (4%)
Length = 456
Score = 81.6 bits (200), Expect = 1e-15
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +2
Query: 570 SFFRIPACVVKVCNRIMRDFLWGASDGGKRIAWVKWLDVCQPKDVGGLGIKDLDLFNRSL 629
SFF +P ++ + R FLWG ++IAWV W VC PK GGLGIKDL FN +L
Sbjct: 5 SFFSLP*KIIAKLESLQRRFLWGGEADSRKIAWVNWKTVCLPKAKGGLGIKDLRTFNTTL 184
Query: 630 LGKWLWRWRTKKQALWCQVIRA 651
LGKW W +Q W +V+++
Sbjct: 185 LGKWRWDLFYIQQEPWAKVLQS 250
>BM891241
Length = 407
Score = 70.9 bits (172), Expect = 2e-12
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = -2
Query: 592 GASDGGKRIAWVKWLDVCQPKDVGGLGIKDLDLFNRSLLGKWLWRWRTKKQALWCQVIRA 651
G K+I WVKW VC PK GGLGIKD+ FN +LLGKW+W + +Q LW ++I +
Sbjct: 406 GGDHDHKKIPWVKWEVVCLPKTKGGLGIKDISKFNIALLGKWIWALASDQQQLWARIINS 227
>TC206673
Length = 742
Score = 70.5 bits (171), Expect = 2e-12
Identities = 30/84 (35%), Positives = 50/84 (58%)
Frame = +3
Query: 63 VVQKINILDVKEEETGLSQEEVATRESLLFDFWTVLRHHESLLCQKARSRWLAEGDQNSG 122
+ +K+N ++ LS +E+ ++ L W +ESLL QK+R +WL EGD NS
Sbjct: 30 IKKKLNEVEDLASNRSLSVDEIKAKKELQQQLWEASTAYESLLRQKSRDKWLKEGDNNSA 209
Query: 123 FFHSTINWKRRTNSIVGLWVEGVW 146
+FH+ IN++R N + G+ ++G W
Sbjct: 210 YFHTVINFRRHYNGLQGILIQGEW 281
>TC234193
Length = 697
Score = 66.2 bits (160), Expect = 4e-11
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Frame = -3
Query: 175 LEGVPFKTLSDSDNS-----VLIGPMDEVEIKDAVWACGGNKSPGPDGFNFRFIKQFWDV 229
L+GV FKT++ DN +++G ++ W + +G+NF FIK+ +V
Sbjct: 320 LDGVNFKTINGEDNDRLTHVLVLGTQNKRGSLGV*W----KQKFDSNGYNFNFIKKC*EV 153
Query: 230 LKGDVIKAVREFWRRGAWSRGCNASFIVLIPKVNSPQPLNEFRPISLIGCIYK 282
+K DV++A++EF G SRG NASF+ + P L +FRP++L+G + K
Sbjct: 152 MKEDVVRAIQEFHSHGCLSRGTNASFL-----THPP*GLGDFRPVTLVGSLCK 9
>CF922212
Length = 445
Score = 62.0 bits (149), Expect = 8e-10
Identities = 30/62 (48%), Positives = 38/62 (60%)
Frame = -2
Query: 574 IPACVVKVCNRIMRDFLWGASDGGKRIAWVKWLDVCQPKDVGGLGIKDLDLFNRSLLGKW 633
+P V+ R+ + FLWG G K+IAWV W VC PK+ GLG +DL FN +LLGK
Sbjct: 441 VPNKVLDKLVRLQQWFLWGGGLGQKKIAWVNWDSVCLPKEKEGLGNRDLRKFNYALLGKR 262
Query: 634 LW 635
W
Sbjct: 261 RW 256
>BU762692
Length = 423
Score = 61.6 bits (148), Expect = 1e-09
Identities = 31/55 (56%), Positives = 37/55 (66%)
Frame = -3
Query: 467 ILRCFELVSGLKVNFHKSKLAAIAIETGVAHQFASFLNCKVMTIPFVYLGIPVGA 521
ILR FELVSGLK+NF KS A + + AS LNC ++ IPFVY GIP+GA
Sbjct: 181 ILRTFELVSGLKINFAKSCFGAFGMTDRWKTEAASCLNCSLLAIPFVYQGIPIGA 17
>BM891637
Length = 427
Score = 59.7 bits (143), Expect = 4e-09
Identities = 24/53 (45%), Positives = 33/53 (61%)
Frame = -1
Query: 597 GKRIAWVKWLDVCQPKDVGGLGIKDLDLFNRSLLGKWLWRWRTKKQALWCQVI 649
GK+IAW+ W C DVGGLGIKD+ + N +LL KW W + LW +++
Sbjct: 421 GKKIAWISWRQCCASGDVGGLGIKDIKILNNALLIKWKWLMFHQPHQLWNRIL 263
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.325 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,151,569
Number of Sequences: 63676
Number of extensions: 542547
Number of successful extensions: 4059
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 3944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4041
length of query: 651
length of database: 12,639,632
effective HSP length: 103
effective length of query: 548
effective length of database: 6,081,004
effective search space: 3332390192
effective search space used: 3332390192
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0060.14