BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0060.1
(358 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227817 similar to UP|Q7FN01 (Q7FN01) Beta 1,3-glycosyltransfer... 328 3e-90
TC216425 similar to UP|Q9ZS49 (Q9ZS49) Avr9 elicitor response pr... 254 3e-68
TC230155 similar to UP|Q94F27 (Q94F27) Avr9 elicitor response pr... 253 1e-67
TC209700 similar to UP|O23050 (O23050) YUP8H12.22 protein (At1g0... 168 3e-42
BG511261 similar to GP|20372915|em beta 1 3-glycosyltransferase-... 164 6e-41
TC233643 similar to UP|O23050 (O23050) YUP8H12.22 protein (At1g0... 91 3e-39
BM567725 similar to GP|14423410|gb| Avr9 elicitor response prote... 135 2e-32
BE347349 similar to GP|4138265|emb Avr9 elicitor response protei... 131 4e-31
TC227819 weakly similar to UP|Q7FN01 (Q7FN01) Beta 1,3-glycosylt... 110 8e-25
TC208780 similar to GB|AAP68270.1|31711828|BT008831 At1g53290 {A... 101 5e-22
TC227818 weakly similar to UP|Q7FN01 (Q7FN01) Beta 1,3-glycosylt... 100 2e-21
AW760406 similar to GP|21553519|gb Avr9 elicitor response-like p... 97 9e-21
BQ081763 similar to GP|20372915|emb beta 1 3-glycosyltransferase... 79 2e-15
TC216426 homologue to UP|Q9ZS49 (Q9ZS49) Avr9 elicitor response ... 71 2e-14
TC232401 similar to UP|Q8RW34 (Q8RW34) Beta 1,3-glycosyltransfer... 70 1e-12
BE820648 similar to GP|14488078|gb| At1g05170/YUP8H12_22 {Arabid... 69 4e-12
TC220360 similar to UP|O23050 (O23050) YUP8H12.22 protein (At1g0... 60 2e-09
AW460016 similar to PIR|A86458|A864 probasble elicitor response ... 54 1e-07
TC218950 similar to UP|Q9LQX1 (Q9LQX1) T24P13.20, partial (49%) 44 1e-04
TC212709 37 0.014
>TC227817 similar to UP|Q7FN01 (Q7FN01) Beta 1,3-glycosyltransferase-like
protein II, partial (89%)
Length = 1129
Score = 328 bits (840), Expect = 3e-90
Identities = 157/315 (49%), Positives = 221/315 (69%)
Frame = +2
Query: 20 SALVFAMIATMATVYVAGRLWQDAENRVHLVEELEKRTGQGQSAVSVDDTLKVIACREQQ 79
S+LV A + +A +YVAGRLWQDAENR L L+K + Q ++V+D L V+ CR+ +
Sbjct: 155 SSLVMAFFSCVAWLYVAGRLWQDAENRNLLASLLKKNSAQRPKVLTVEDKLMVLGCRDLE 334
Query: 80 KKLSALEMELTAARKEGFVSKHLSGDNEKQKHPTKKVLSVIGVMTTFGRRKNRDAIRKAW 139
+++ EMELT A+ +G+ L G ++ +++L+VIGV T FG + R+ R +W
Sbjct: 335 RRIVEAEMELTLAKSQGY----LKGQGQRSGSSDRRLLAVIGVYTGFGSKLKRNIFRGSW 502
Query: 140 MPTGTAMKKLADQKGVIVRFVIGRSANRGDSLDKEIETEISQTNDFIILDNQVEAPEERA 199
MP G A+KKL +++GV++RFVIGRSANRGDSLD+ I+ E T DF+IL+ EA EE
Sbjct: 503 MPRGDALKKL-EERGVVIRFVIGRSANRGDSLDRNIDEENRTTKDFLILEGHEEAQEELP 679
Query: 200 KKIKSFFIYAVDNWDAEFYAKVNDDVYVNLDALGGVLTSHLDKPRVYIGCMKSGQVFSEP 259
KK+K+FF AV NWDA+FY KV+D + ++L+ L +L + Y+GCMKSG+V SE
Sbjct: 680 KKVKTFFSTAVQNWDADFYVKVDDGIDIDLEGLIELLDRRRGQDGAYVGCMKSGEVISEE 859
Query: 260 TQKWYEPDWWKFGDGKSYFRHASGDLYVISKALAQFISINRLILRTYAHDDISTGSWFIG 319
+ WYEPDWWKFGD KSYFRHA+G L +ISK LAQ+I+IN + L+TYA+DD S GSW +G
Sbjct: 860 GKPWYEPDWWKFGDEKSYFRHAAGSLVIISKNLAQYININSVSLKTYAYDDTSLGSWMMG 1039
Query: 320 LDVMHVDETKFCCSS 334
+ ++D+++ CCSS
Sbjct: 1040VQATYIDDSRLCCSS 1084
>TC216425 similar to UP|Q9ZS49 (Q9ZS49) Avr9 elicitor response protein,
partial (91%)
Length = 1691
Score = 254 bits (650), Expect = 3e-68
Identities = 137/330 (41%), Positives = 195/330 (58%), Gaps = 18/330 (5%)
Frame = +2
Query: 23 VFAMIATMATVYVAGRLWQDAENRVHLVEELEKRTGQGQSAVSVDDTLKVI--------- 73
+F++ + + + V R+W E+ L + +R Q +S D K +
Sbjct: 131 IFSVFSFIIGMLVTSRMWDPPESNGLLTAQ-HQRDQQQLQVISGDCATKKMQPKDAVSEL 307
Query: 74 -----ACREQQKKLSALEMELTAAR---KEGFVSKHLSGDNEKQKHPTKKVLSVIGVMTT 125
A + K++S L+MEL AAR + G + S + P KK VIG+ T
Sbjct: 308 QKTHEAIQALDKQVSMLQMELAAARSSRESGISDSNASTTTSGEGAPRKKAFIVIGINTA 487
Query: 126 FGRRKNRDAIRKAWMPTGTAMKKLADQKGVIVRFVIGRSANRGDSLDKEIETEISQTNDF 185
F RK RD++R+ WMP G + +L +KG+++RF+IG SA LD+ I++E +Q DF
Sbjct: 488 FSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDF 667
Query: 186 IILDNQVEAPEERAKKIKSFFIYAVDNWDAEFYAKVNDDVYVNLDALGGVLTSHLDKPRV 245
+ L++ VE E + K K FF AV WDA+FY KV+DDV+VNL L L H KPRV
Sbjct: 668 LRLEH-VEGYHELSAKTKIFFSTAVSMWDADFYVKVDDDVHVNLGVLATTLARHRSKPRV 844
Query: 246 YIGCMKSGQVFSEPTQKWYEPDWWKFG-DGKSYFRHASGDLYVISKALAQFISINRLILR 304
YIGCMKSG V S K++EP++WKFG +G YFRHA+G +Y ISK LA +ISIN+ IL
Sbjct: 845 YIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILH 1024
Query: 305 TYAHDDISTGSWFIGLDVMHVDETKFCCSS 334
YA++D+S G+WFIGL+V H+D+ CC +
Sbjct: 1025KYANEDVSLGAWFIGLEVEHIDDRNMCCGT 1114
>TC230155 similar to UP|Q94F27 (Q94F27) Avr9 elicitor response protein-like,
partial (43%)
Length = 1051
Score = 253 bits (645), Expect = 1e-67
Identities = 117/154 (75%), Positives = 129/154 (82%)
Frame = +3
Query: 187 ILDNQVEAPEERAKKIKSFFIYAVDNWDAEFYAKVNDDVYVNLDALGGVLTSHLDKPRVY 246
ILDN VE + KK K FF +A D WDAEFYAKVNDDVYVN+DALG L +HLDKPRVY
Sbjct: 3 ILDNHVETNDAFPKKAKLFFAHAADKWDAEFYAKVNDDVYVNIDALGATLATHLDKPRVY 182
Query: 247 IGCMKSGQVFSEPTQKWYEPDWWKFGDGKSYFRHASGDLYVISKALAQFISINRLILRTY 306
+GCMKSG+VFSE KWYEP+WWKFGD KSYFRHASG++YVIS+ALA+FISINR ILRTY
Sbjct: 183 MGCMKSGEVFSELNHKWYEPEWWKFGDKKSYFRHASGEMYVISQALAKFISINRSILRTY 362
Query: 307 AHDDISTGSWFIGLDVMHVDETKFCCSSRSPGMI 340
AHDD+S GSWFIGLDV HVDE KFCCSS S G I
Sbjct: 363 AHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAI 464
>TC209700 similar to UP|O23050 (O23050) YUP8H12.22 protein
(At1g05170/YUP8H12_22), partial (46%)
Length = 1016
Score = 168 bits (426), Expect = 3e-42
Identities = 75/135 (55%), Positives = 100/135 (73%), Gaps = 1/135 (0%)
Frame = +2
Query: 201 KIKSFFIYAVDNWDAEFYAKVNDDVYVNLDALGGVLTSHLDKPRVYIGCMKSGQVFSEPT 260
K S+F AV+ WDA+FY KV+DDV+VN+ LG L H KPR+YIGCMKSG V S+
Sbjct: 11 KTNSYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKG 190
Query: 261 QKWYEPDWWKFGD-GKSYFRHASGDLYVISKALAQFISINRLILRTYAHDDISTGSWFIG 319
+++EP++WKFG+ G YFRHA+G LY IS LA +ISIN+ +L YA++D+S GSWFIG
Sbjct: 191 VRYHEPEYWKFGEAGNRYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIG 370
Query: 320 LDVMHVDETKFCCSS 334
LDV H+D+ + CC +
Sbjct: 371 LDVEHIDDRRLCCGT 415
>BG511261 similar to GP|20372915|em beta 1 3-glycosyltransferase-like protein
I {Lycopersicon esculentum}, partial (36%)
Length = 432
Score = 164 bits (415), Expect = 6e-41
Identities = 85/137 (62%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Frame = +3
Query: 5 GSQSRLSGQSFG-SRVSALVFAMIATMATVYVAGRLWQDAENRVHLVEELEKRTGQGQSA 63
GS RLS SR+ AL+ +M AT A++YVAGRLWQDAENRV+L++EL++ TGQGQSA
Sbjct: 9 GSSHRLSSMGNNRSRIPALLISMFATFASIYVAGRLWQDAENRVYLIKELDRITGQGQSA 188
Query: 64 VSVDDTLKVIACREQQKKLSALEMELTAARKEGFVSKHLSGDNEKQKHPTKKVLSVIGVM 123
+SVDDTLK+IACREQ KKL A+E EL AR++GFVSK L N + ++ L VIG++
Sbjct: 189 ISVDDTLKIIACREQHKKLDAIETELAGARQDGFVSKPLIETN--GTYSMRRPLVVIGIL 362
Query: 124 TTFGRRKNRDAIRKAWM 140
T FGR+KNRDAIRKAWM
Sbjct: 363 TKFGRQKNRDAIRKAWM 413
>TC233643 similar to UP|O23050 (O23050) YUP8H12.22 protein
(At1g05170/YUP8H12_22), partial (41%)
Length = 715
Score = 90.9 bits (224), Expect(2) = 3e-39
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +3
Query: 266 PDWWKFGD-GKSYFRHASGDLYVISKALAQFISINRLILRTYAHDDISTGSWFIGLDVMH 324
P++WKFG+ G YFRHA+G LY ISK LA +IS N+ +L YA++D+S GSWFIGL V H
Sbjct: 282 PEYWKFGEAGNKYFRHATGQLYAISKDLATYISNNKHVLHKYANEDVSLGSWFIGLYVDH 461
Query: 325 VDETKFCCSS 334
+D+ + CC +
Sbjct: 462 IDDRRLCCGT 491
Score = 89.4 bits (220), Expect(2) = 3e-39
Identities = 46/93 (49%), Positives = 62/93 (66%)
Frame = +2
Query: 172 DKEIETEISQTNDFIILDNQVEAPEERAKKIKSFFIYAVDNWDAEFYAKVNDDVYVNLDA 231
D+ IE E + DF+ LD+ VE E + K K++F AV+ WDA+FY KV+DDV+VN+
Sbjct: 2 DRAIEAEDRKHGDFLRLDH-VEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIAT 178
Query: 232 LGGVLTSHLDKPRVYIGCMKSGQVFSEPTQKWY 264
LG L H KPRVYIGCMKSG V S+ +++
Sbjct: 179 LGQTLLRHRSKPRVYIGCMKSGPVLSQKGVRYH 277
>BM567725 similar to GP|14423410|gb| Avr9 elicitor response protein-like
{Arabidopsis thaliana}, partial (27%)
Length = 434
Score = 135 bits (341), Expect = 2e-32
Identities = 74/141 (52%), Positives = 96/141 (67%)
Frame = +2
Query: 23 VFAMIATMATVYVAGRLWQDAENRVHLVEELEKRTGQGQSAVSVDDTLKVIACREQQKKL 82
++AM V + Q +V +V TGQGQSA+SVDDTLK+IACREQ KKL
Sbjct: 17 LYAMSTERTDVQFNHQYSQQIRKQVVVVPPT*LVTGQGQSAISVDDTLKIIACREQHKKL 196
Query: 83 SALEMELTAARKEGFVSKHLSGDNEKQKHPTKKVLSVIGVMTTFGRRKNRDAIRKAWMPT 142
A+E EL AR+EGFVSK L N + ++ L VIG++T FGR+KNRDAIRKAWM +
Sbjct: 197 DAIETELAGARQEGFVSKPLIKTN--GTYSMRRPLVVIGILTKFGRQKNRDAIRKAWMGS 370
Query: 143 GTAMKKLADQKGVIVRFVIGR 163
G ++KK+ + KG+IV+FVIGR
Sbjct: 371 GASLKKIEEGKGIIVQFVIGR 433
>BE347349 similar to GP|4138265|emb Avr9 elicitor response protein {Nicotiana
tabacum}, partial (30%)
Length = 376
Score = 131 bits (330), Expect = 4e-31
Identities = 65/123 (52%), Positives = 84/123 (67%), Gaps = 1/123 (0%)
Frame = +1
Query: 194 APEERAKKIKSFFIYAVDNWDAEFYAKVNDDVYVNLDALGGVLTSHLDKPRVYIGCMKSG 253
AP+E + K K FF AV WDA+FY KV+DDV+VNL L L HL KPRVYIGCMKSG
Sbjct: 7 APDELSAKTKIFFSTAVSMWDADFYVKVDDDVHVNLGVLATTLARHLSKPRVYIGCMKSG 186
Query: 254 QVFSEPTQKWYEPDWWKFG-DGKSYFRHASGDLYVISKALAQFISINRLILRTYAHDDIS 312
V S K++EP++WK G G FRHA+G + + + +A +ISINR IL YA++D+S
Sbjct: 187 PVLSRKDVKYHEPEFWKGGKKGNKCFRHATGHI*AVREDVATYISINRPILHKYANEDVS 366
Query: 313 TGS 315
G+
Sbjct: 367 LGA 375
>TC227819 weakly similar to UP|Q7FN01 (Q7FN01) Beta
1,3-glycosyltransferase-like protein II, partial (27%)
Length = 714
Score = 110 bits (276), Expect = 8e-25
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +3
Query: 249 CMKSGQVFSEPTQKWYEPDWWKFGDGKSYFRHASGDLYVISKALAQFISINRLILRTYAH 308
CMKSG+V SE WY DWWKFGD S HA+G L +ISK LAQ+I+IN + L+TY +
Sbjct: 3 CMKSGEVISEEXXXWYXXDWWKFGDXXSXXXHAAGSLVIISKNLAQYININSVSLKTYGY 182
Query: 309 DDISTGSWFIGLDVMHVDETKFCCSS 334
DD S GSW +G+ ++D+++ CCSS
Sbjct: 183 DDTSLGSWMMGIQATYIDDSRLCCSS 260
>TC208780 similar to GB|AAP68270.1|31711828|BT008831 At1g53290 {Arabidopsis
thaliana;} , partial (51%)
Length = 969
Score = 101 bits (252), Expect = 5e-22
Identities = 49/129 (37%), Positives = 76/129 (57%), Gaps = 1/129 (0%)
Frame = +2
Query: 204 SFFIYAVDNWDAEFYAKVNDDVYVNLDALGGVLTSHLDKPRVYIGCMKSGQVFSEPTQKW 263
+FF A +DAEFY K +DD+Y+ D L +L P+ YIGCMK G VF++P KW
Sbjct: 20 AFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKW 199
Query: 264 YEPDWWKFGDGKSYFRHASGDLYVISKALAQ-FISINRLILRTYAHDDISTGSWFIGLDV 322
YEP GK YF HA G +YV+S + Q +++ R ++++D++ G+W + ++V
Sbjct: 200 YEP--LSHLLGKEYFLHAYGPIYVLSADVVQSLVALRNDSFRMFSNEDVTIGAWMLAMNV 373
Query: 323 MHVDETKFC 331
H + + C
Sbjct: 374 NHENNHELC 400
>TC227818 weakly similar to UP|Q7FN01 (Q7FN01) Beta
1,3-glycosyltransferase-like protein II, partial (26%)
Length = 677
Score = 99.8 bits (247), Expect = 2e-21
Identities = 43/83 (51%), Positives = 57/83 (67%)
Frame = +2
Query: 252 SGQVFSEPTQKWYEPDWWKFGDGKSYFRHASGDLYVISKALAQFISINRLILRTYAHDDI 311
S +V SE WY DW FGD KSYFRHA G L +ISK L +I+IN + L+TYA+DD
Sbjct: 2 SXEVISEEGXXWYXXDWXXFGDEKSYFRHAXGSLVIISKNLXXYININSVSLKTYAYDDT 181
Query: 312 STGSWFIGLDVMHVDETKFCCSS 334
S GSW +G+ ++D+++ CCSS
Sbjct: 182 SLGSWMMGVQATYIDDSRLCCSS 250
>AW760406 similar to GP|21553519|gb Avr9 elicitor response-like protein
{Arabidopsis thaliana}, partial (26%)
Length = 425
Score = 97.4 bits (241), Expect = 9e-21
Identities = 52/108 (48%), Positives = 65/108 (60%)
Frame = +2
Query: 114 KKVLSVIGVMTTFGRRKNRDAIRKAWMPTGTAMKKLADQKGVIVRFVIGRSANRGDSLDK 173
KK VIG+ T F RK RD++R WMP KKL ++KG+I+RFVIG S+ G LDK
Sbjct: 104 KKYFMVIGINTGFSSRKRRDSVRATWMPRAEERKKLEEEKGIIIRFVIGHSSTSGGILDK 283
Query: 174 EIETEISQTNDFIILDNQVEAPEERAKKIKSFFIYAVDNWDAEFYAKV 221
IE E DF+ L N +E E + K K +F AV WDAE+Y KV
Sbjct: 284 AIEAEERLHADFLRL-NHIEGYLELSAKTKIYFSTAVALWDAEYYVKV 424
>BQ081763 similar to GP|20372915|emb beta 1 3-glycosyltransferase-like
protein I {Lycopersicon esculentum}, partial (10%)
Length = 421
Score = 79.3 bits (194), Expect = 2e-15
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 26/100 (26%)
Frame = +2
Query: 1 MRSWGSQSRLSGQSFG-SRVSALVFAMIATMATVYVAGR--------------------- 38
M+ GS RLS SR+ AL+ +M AT A++YVAGR
Sbjct: 122 MQIRGSSHRLSSMGNNRSRIPALLISMFATFASIYVAGRFFFSFSSFHNFRCAYF*SFSV 301
Query: 39 ----LWQDAENRVHLVEELEKRTGQGQSAVSVDDTLKVIA 74
LWQDAENRV+L++EL++ TGQGQSA+SVDDTLK+IA
Sbjct: 302 FLFRLWQDAENRVYLIKELDRITGQGQSAISVDDTLKIIA 421
>TC216426 homologue to UP|Q9ZS49 (Q9ZS49) Avr9 elicitor response protein,
partial (31%)
Length = 780
Score = 70.9 bits (172), Expect(2) = 2e-14
Identities = 32/66 (48%), Positives = 45/66 (67%)
Frame = +1
Query: 269 WKFGDGKSYFRHASGDLYVISKALAQFISINRLILRTYAHDDISTGSWFIGLDVMHVDET 328
W+ GD + A G +Y ISK LA +ISIN+ IL YA++D+S G+WFIGL+V H+D+
Sbjct: 31 WRRGDTNTSDMQA-GQIYAISKDLATYISINKPILHKYANEDVSLGAWFIGLEVEHIDDR 207
Query: 329 KFCCSS 334
CC +
Sbjct: 208 NMCCGT 225
Score = 25.4 bits (54), Expect(2) = 2e-14
Identities = 7/12 (58%), Positives = 12/12 (99%)
Frame = +2
Query: 262 KWYEPDWWKFGD 273
K++EP++WKFG+
Sbjct: 2 KYHEPEFWKFGE 37
>TC232401 similar to UP|Q8RW34 (Q8RW34) Beta 1,3-glycosyltransferase-like
protein I, partial (9%)
Length = 495
Score = 70.5 bits (171), Expect = 1e-12
Identities = 32/38 (84%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Frame = +3
Query: 304 RTYAHDDISTGSWFIGLDVMHVDETKFCCSSR-SPGMI 340
RTYAHDD+S GSWFIGLDV H+DETKFCCSSR SPG I
Sbjct: 3 RTYAHDDVSIGSWFIGLDVEHLDETKFCCSSRWSPGAI 116
>BE820648 similar to GP|14488078|gb| At1g05170/YUP8H12_22 {Arabidopsis
thaliana}, partial (24%)
Length = 503
Score = 68.6 bits (166), Expect = 4e-12
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = -3
Query: 285 LYVISKALAQFISINRLILRTYAHDDISTGSWFIGLDVMHVDETKFCCSS 334
LY IS+ LA +ISIN+ +L YA++D+S GSWFIGLDV HVD+ K CC +
Sbjct: 501 LYAISQDLAAYISINQDVLHKYANEDVSLGSWFIGLDVDHVDDRKMCCGT 352
>TC220360 similar to UP|O23050 (O23050) YUP8H12.22 protein
(At1g05170/YUP8H12_22), partial (23%)
Length = 756
Score = 59.7 bits (143), Expect = 2e-09
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Frame = +2
Query: 3 SWGSQSRLSGQSFGSRVSALVFAMIATMATVYVAGRLWQDAENRVHLVEELEKRTGQGQS 62
+W S+ L +S S+ AL + + A + R+W EN L + S
Sbjct: 107 TWKSRGELPSRSVISQRWALFLCLGSFCAGMLFTTRIWTIPENNKGLARPTASEA-EKLS 283
Query: 63 AVSVDDTLKVIACREQQ--------------------KKLSALEMELTAAR--KEGFVSK 100
VS +++ E + K +S LEMEL AAR +E S
Sbjct: 284 LVSEGCNSRILQEMEMKRDKDIYGEVFKSHNSIQTLDKTISNLEMELAAARVTQESLRSG 463
Query: 101 HLSGDNEKQKHPT---KKVLSVIGVMTTFGRRKNRDAIRKAWMPTGTAMKKLADQKGVIV 157
D+ + + +K L V+G+ T F RK RD++R MP G K L ++KG+I+
Sbjct: 464 APISDDIRLSESSSGKRKYLMVVGINTAFSSRKRRDSVRATCMPQGEKRKNL-EEKGIIM 640
Query: 158 RFVIG 162
RFVIG
Sbjct: 641 RFVIG 655
>AW460016 similar to PIR|A86458|A864 probasble elicitor response protein -
Arabidopsis thaliana, partial (11%)
Length = 169
Score = 53.9 bits (128), Expect = 1e-07
Identities = 26/46 (56%), Positives = 31/46 (66%), Gaps = 1/46 (2%)
Frame = +2
Query: 249 CMKSGQVFSEPTQKWYEPDWWKFG-DGKSYFRHASGDLYVISKALA 293
CMKSG V S K +EP +WKFG +G YFRHA+G +Y IS LA
Sbjct: 5 CMKSGPVLSRMDGKCHEPVFWKFGEEGNIYFRHATGQIYAISNDLA 142
>TC218950 similar to UP|Q9LQX1 (Q9LQX1) T24P13.20, partial (49%)
Length = 1399
Score = 43.9 bits (102), Expect = 1e-04
Identities = 53/219 (24%), Positives = 92/219 (41%), Gaps = 9/219 (4%)
Frame = +1
Query: 120 IGVMTTFGRRKNRDAIRKAWMPTGTAMKKLADQKGVIVRFVIGRSANRGDSLDKEIETEI 179
IGV +T K R A+R+ WM VRF +G ++ +++E+ E
Sbjct: 373 IGVFSTANNFKRRMAVRRTWMQYNAVRSNT-----TAVRFFVG--LHKSTVVNEELWRE- 528
Query: 180 SQTNDFIILDNQVEAPEERAKKIKSFFIYAVDNWDAEFYAKVNDDVYVNLD-ALGGVLTS 238
++T + L V+ K + I+ A+F K +DD +V +D L +
Sbjct: 529 ARTYGDVQLMPFVDYYSLITWKSLAICIFGT-QVSAKFVMKTDDDAFVRVDEVLDSLHRI 705
Query: 239 HLDKPRVYIGCMKSGQVFSEPTQKWY-EPDWWKFGDGKSYFRHASGDLYVISKALAQFIS 297
+ D +Y + KWY P+ W G +Y A G YV+S +A+ +S
Sbjct: 706 NADHGLLYGLINLDSRPHRNTDSKWYISPEEWSEG---TYPPWAHGPGYVVSHDIARTVS 876
Query: 298 --INRLILRTYAHDDISTGSWFI-----GLDVMHVDETK 329
L+ + +D++ G W GL+V + +E +
Sbjct: 877 KKFRENHLKMFKLEDVAMGIWIADMKKEGLEVRYENEVR 993
>TC212709
Length = 420
Score = 37.0 bits (84), Expect = 0.014
Identities = 31/129 (24%), Positives = 60/129 (46%)
Frame = +1
Query: 120 IGVMTTFGRRKNRDAIRKAWMPTGTAMKKLADQKGVIVRFVIGRSANRGDSLDKEIETEI 179
IGV++ R A+RK WM A K +D V+VRF + + N ++ + E
Sbjct: 7 IGVLSASNHFAERMAVRKTWMQA--AAVKSSD---VVVRFFV--ALNPRKEVNVVLRKEA 165
Query: 180 SQTNDFIILDNQVEAPEERAKKIKSFFIYAVDNWDAEFYAKVNDDVYVNLDALGGVLTSH 239
+ D +IL ++ E K + + + N A + K +DD ++ +D + + +
Sbjct: 166 AYFGDIVILPF-MDRYELVVLKTMAICEFGIQNVTAAYVLKCDDDTFIRVDTVLKEIEAV 342
Query: 240 LDKPRVYIG 248
++ +Y+G
Sbjct: 343 PEQKPLYMG 369
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,073,221
Number of Sequences: 63676
Number of extensions: 168779
Number of successful extensions: 862
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of query: 358
length of database: 12,639,632
effective HSP length: 98
effective length of query: 260
effective length of database: 6,399,384
effective search space: 1663839840
effective search space used: 1663839840
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0060.1