TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0052a.3
         (242 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC208968 similar to UP|GBF4_ARATH (P42777) G-box binding factor ...   135  2e-32
TC222296 similar to UP|P93426 (P93426) Leucine zipper protein, p...    94  4e-20
TC229348 homologue to UP|Q94KA6 (Q94KA6) BZIP transcription fact...    78  3e-15
TC232349 similar to UP|O81241 (O81241) Dc3 promoter-binding fact...    71  5e-13
TC222446 similar to UP|O81241 (O81241) Dc3 promoter-binding fact...    69  2e-12
TC213541 similar to UP|Q9LES3 (Q9LES3) Promoter-binding factor-l...    65  2e-11
BQ610152                                                               64  6e-11
BG155969 similar to PIR|T12622|T126 Dc3 promoter-binding factor-...    64  6e-11
CO983201                                                               61  4e-10
NP004994 G/HBF-1                                                       53  1e-07
TC232503 UP|Q39896 (Q39896) TGACG-motif-binding factor, partial ...    52  2e-07
TC227230 similar to UP|P93839 (P93839) G/HBF-1, partial (72%)          52  2e-07
TC234680 similar to UP|Q9AT29 (Q9AT29) BZip transcription factor...    52  3e-07
TC216016 similar to UP|P93839 (P93839) G/HBF-1, partial (61%)          51  5e-07
TC233650 similar to UP|Q84JC9 (Q84JC9) BZIP transcription factor...    50  9e-07
BI970547 weakly similar to GP|29027731|dbj bZIP transcription fa...    49  2e-06
TC218403 UP|Q39895 (Q39895) TGACG-motif binding factor, complete       49  2e-06
TC208132 homologue to UP|Q94KA7 (Q94KA7) BZIP transcription fact...    49  3e-06
TC232589 similar to UP|Q8LK78 (Q8LK78) ABA response element bind...    48  5e-06
CD412386                                                               47  6e-06

>TC208968 similar to UP|GBF4_ARATH (P42777) G-box binding factor 4
           (AtbZIP40), partial (27%)
          Length = 1199

 Score =  135 bits (340), Expect = 2e-32
 Identities = 97/250 (38%), Positives = 134/250 (52%), Gaps = 9/250 (3%)
 Frame = +2

Query: 1   MASSKMMMSSSKSLDHQQPSSPPPSSMPQFTTTNFID--HADSTLTDPYVPRTVDDVWQE 58
           MASSK++ ++     +   SS   S+ P    ++ +   H    +     P++VDDVW +
Sbjct: 68  MASSKVVSTNPDLPRNSSSSSSSSSTSPISPLSSLLSDLHPMDDILKSISPKSVDDVWND 247

Query: 59  IIAGDH-----HQCKEEIPDEMMTLEDFLVKAGAVDGDDEDDEVKMSMPLTERLSGVFSL 113
           I+ G            +  D  MTLEDFL KA        +++V+ + P           
Sbjct: 248 IVTGATVHDAVSATTTDNADAAMTLEDFLTKA------IREEDVRGAPPPPP------PP 391

Query: 114 DGSSFQGMEGVEGGSASVGGFGNGVEVVEGTRGKRG--RPVVENLDKAAQQRQRRMIKNR 171
             SSF      +G S+SV  F NGV        ++G  R V E +DKA  Q+QRRMIKNR
Sbjct: 392 PPSSFLPFPA-DGSSSSVEPFANGVSAAPSNSVQKGKRRAVEEPVDKATLQKQRRMIKNR 568

Query: 172 ESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQLMEEVIPVVEKRRPP 231
           ESAARSRERKQAY  ELE L  +LE+EN +LL E+AE  ++R KQL E +IP+    +P 
Sbjct: 569 ESAARSRERKQAYTSELEYLVHQLEQENVQLLNEEAEMRRQRKKQLFECIIPIEVMPKPK 748

Query: 232 RPLRRINSMQ 241
           + LRR+NS Q
Sbjct: 749 KKLRRVNSAQ 778


>TC222296 similar to UP|P93426 (P93426) Leucine zipper protein, partial (24%)
          Length = 945

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 81/209 (38%), Positives = 103/209 (48%), Gaps = 3/209 (1%)
 Frame = +3

Query: 1   MASSKMMMSSSKSLDHQQPSSPPPSSMPQFTTTNFIDHADSTLTDPYVPRTVDDVWQEII 60
           MASSK++ ++         SS   SS+   ++     H    L     P +VDD W+ I 
Sbjct: 66  MASSKLVSTNPDLPRDPSSSSSSSSSISPLSSLLSDLHPMDDLLKSITPNSVDDFWKGIA 245

Query: 61  AGDHHQCKEEIPDEMMTLEDFLVKAGAVDGDDEDDEVKMSMPLTERLSGVFSLDGSSFQG 120
           A              +TLEDFL KA  V  +D    V+ + P              SF  
Sbjct: 246 AASTDNAGG------VTLEDFLTKAIPVTEED----VRGAPP-----------PPPSFLP 362

Query: 121 MEGVEGGSASVGGFGN-GVEVVEGTRGKRG--RPVVENLDKAAQQRQRRMIKNRESAARS 177
               EG S+SV  F N GV        ++G  R V E +DKA  Q+ RRMIKNRESAARS
Sbjct: 363 FPA-EGSSSSVEPFANNGVGSAPSNSVQKGKRRAVEEPVDKATLQKLRRMIKNRESAARS 539

Query: 178 RERKQAYQVELESLAVKLEEENDKLLKEK 206
           RERKQAY  ELE L  +LE+EN +LLKE+
Sbjct: 540 RERKQAYTSELEYLVHQLEQENARLLKEE 626



 Score = 26.9 bits (58), Expect = 8.3
 Identities = 22/67 (32%), Positives = 31/67 (45%), Gaps = 3/67 (4%)
 Frame = -2

Query: 108 SGVFSLDGSSFQGMEGVEGGSASVGGFGNG---VEVVEGTRGKRGRPVVENLDKAAQQRQ 164
           S VF  DG    G E +EG +A + G G      EVV+G  G     VV  +    ++R+
Sbjct: 329 SDVFLCDGDGL-GEEILEGHAAGIVGGGGSDPLPEVVDGIGGDGLEEVVHGVQIGEKRRK 153

Query: 165 RRMIKNR 171
            R  + R
Sbjct: 152 GRYRRRR 132


>TC229348 homologue to UP|Q94KA6 (Q94KA6) BZIP transcription factor 6,
           partial (34%)
          Length = 786

 Score = 78.2 bits (191), Expect = 3e-15
 Identities = 47/97 (48%), Positives = 64/97 (65%)
 Frame = +1

Query: 146 GKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKE 205
           G RGR     ++K  ++RQRRMIKNRESAARSR RKQAY +ELE+   KL+EEN++L K+
Sbjct: 196 GLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKK 375

Query: 206 KAERTKERFKQLMEEVIPVVEKRRPPRPLRRINSMQW 242
           +AE  + +  Q+ E +    E +R  R LRR  +  W
Sbjct: 376 QAEIMEIQKNQVKEMMNLQREVKR--RRLRRTQTGPW 480


>TC232349 similar to UP|O81241 (O81241) Dc3 promoter-binding factor-3
           (Fragment), partial (50%)
          Length = 834

 Score = 70.9 bits (172), Expect = 5e-13
 Identities = 41/96 (42%), Positives = 57/96 (58%)
 Frame = +3

Query: 144 TRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLL 203
           T G++     + ++K  ++RQ+RMIKNRESAARSR RKQAY  ELE+   +LEEEN++L 
Sbjct: 357 TPGRKKSTSEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLR 536

Query: 204 KEKAERTKERFKQLMEEVIPVVEKRRPPRPLRRINS 239
           K K           +E+++       P   LRRI S
Sbjct: 537 KRKE----------LEQMLSCAPPPEPKYQLRRIAS 614


>TC222446 similar to UP|O81241 (O81241) Dc3 promoter-binding factor-3
           (Fragment), partial (46%)
          Length = 765

 Score = 68.9 bits (167), Expect = 2e-12
 Identities = 69/203 (33%), Positives = 90/203 (43%), Gaps = 39/203 (19%)
 Frame = +3

Query: 76  MTLEDFLVKAGAVDGDDEDDEVKMSMPLTE--RLSGVFSLDGSSFQG------------- 120
           M LEDFLVKAG +           ++P T+   +SGV S   SS  G             
Sbjct: 27  MXLEDFLVKAGVI---------AEALPTTKDRAMSGVDSNGASSQHGHWLQYQQLPSSVQ 179

Query: 121 ----MEGVEGGSASVGGFGNGVEVV------------------EGTRGKRGRPVVENLDK 158
               M G   G A    F  GV +V                    T G++       ++K
Sbjct: 180 QPNVMGGYVAGHAIQQPFQVGVNLVLDAAYSETPASLKGALSDTQTLGRKRGVSGIVVEK 359

Query: 159 AAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQLM 218
             ++RQ+RMIKNRESAARSR R+QAY  ELE    +LEEEN++L      R  E     M
Sbjct: 360 TVERRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERL-----RRLNE-----M 509

Query: 219 EEVIPVV--EKRRPPRPLRRINS 239
           E  +P V   + +P   LRR +S
Sbjct: 510 ERALPSVPPPEPKPKHQLRRTSS 578


>TC213541 similar to UP|Q9LES3 (Q9LES3) Promoter-binding factor-like protein
           (ABA-responsive element binding protein 3) (AREB3),
           partial (31%)
          Length = 741

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 39/96 (40%), Positives = 54/96 (55%)
 Frame = +1

Query: 144 TRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLL 203
           T G++       ++K  ++RQ+RMIKNRESAARSR RKQAY  ELE    +LEEEN++L 
Sbjct: 10  TAGRKRDASGNVVEKIVERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLR 189

Query: 204 KEKAERTKERFKQLMEEVIPVVEKRRPPRPLRRINS 239
           ++            +E  +P      P   LRR +S
Sbjct: 190 RQNE----------IERALPSAPPPDPKHQLRRTSS 267


>BQ610152 
          Length = 431

 Score = 63.9 bits (154), Expect = 6e-11
 Identities = 31/52 (59%), Positives = 39/52 (74%)
 Frame = +2

Query: 191 LAVKLEEENDKLLKEKAERTKERFKQLMEEVIPVVEKRRPPRPLRRINSMQW 242
           L   LEEEN  LLK++A+R ++RF QLME +IPV EKR+P   LRR+NS QW
Sbjct: 2   LVTHLEEENAILLKQEADRKRQRFNQLMECLIPVEEKRKPKPMLRRVNSSQW 157


>BG155969 similar to PIR|T12622|T126 Dc3 promoter-binding factor-2 - common
           sunflower, partial (43%)
          Length = 414

 Score = 63.9 bits (154), Expect = 6e-11
 Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = +2

Query: 157 DKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQ 216
           +K  ++RQ+RMIKNRESAARSR R+QAY  ELE    +LEEEN++L      R  E    
Sbjct: 2   EKTVERRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERL-----RRLNE---- 154

Query: 217 LMEEVIPVV--EKRRPPRPLRRINS 239
            ME  +P V   + +P + LRR +S
Sbjct: 155 -MERALPSVPPPEPKPKQQLRRTSS 226


>CO983201 
          Length = 774

 Score = 61.2 bits (147), Expect = 4e-10
 Identities = 35/63 (55%), Positives = 40/63 (62%)
 Frame = -3

Query: 144 TRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLL 203
           TR  R R   +  +K  ++R RR IKNRE AARSR RKQAY  EL     +LEEEN KL 
Sbjct: 769 TRLGRKRDXXDAYEKTLERRLRRKIKNREXAARSRARKQAYHNELVGKVSRLEEENVKLK 590

Query: 204 KEK 206
           KEK
Sbjct: 589 KEK 581


>NP004994 G/HBF-1
          Length = 1137

 Score = 52.8 bits (125), Expect = 1e-07
 Identities = 27/51 (52%), Positives = 34/51 (65%)
 Frame = +1

Query: 154 ENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLK 204
           + +D A  +R RRM+ NRESA RSR RKQA+  ELE+   +L  EN  LLK
Sbjct: 499 QGMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLK 651


>TC232503 UP|Q39896 (Q39896) TGACG-motif-binding factor, partial (97%)
          Length = 1263

 Score = 52.4 bits (124), Expect = 2e-07
 Identities = 39/133 (29%), Positives = 69/133 (51%)
 Frame = +3

Query: 90  GDDEDDEVKMSMPLTERLSGVFSLDGSSFQGMEGVEGGSASVGGFGNGVEVVEGTRGKRG 149
           G + D+E++    +    +G      S+ Q   G   G+  V G G G +       KRG
Sbjct: 618 GPESDEEIRRVPEIGGESAGT-----SASQPDAGSNAGTERVQGTGEGQK-------KRG 761

Query: 150 RPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAER 209
           R   +   K    R +R+++NR SA ++RERK+AY ++LE+    LE++N + LKE+   
Sbjct: 762 RSPADKESK----RLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSE-LKERLS- 923

Query: 210 TKERFKQLMEEVI 222
           T +   Q++ +++
Sbjct: 924 TLQNENQMLRQIL 962


>TC227230 similar to UP|P93839 (P93839) G/HBF-1, partial (72%)
          Length = 1250

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 27/51 (52%), Positives = 34/51 (65%)
 Frame = +2

Query: 154 ENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLK 204
           +N D A  +R RRM+ NRESA RSR RKQA+  +LE+   +L  EN  LLK
Sbjct: 479 DNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLK 631


>TC234680 similar to UP|Q9AT29 (Q9AT29) BZip transcription factor, partial
           (49%)
          Length = 571

 Score = 51.6 bits (122), Expect = 3e-07
 Identities = 33/83 (39%), Positives = 46/83 (54%)
 Frame = +2

Query: 154 ENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKER 213
           +NL    +++ RRMI NRESA RSR RKQ +  EL S  V L  EN +L+ +K     E 
Sbjct: 323 QNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLM-DKLNHVSES 499

Query: 214 FKQLMEEVIPVVEKRRPPRPLRR 236
             Q+M+E   + E+    R + R
Sbjct: 500 HDQVMQENAQLKEQALELRQMIR 568


>TC216016 similar to UP|P93839 (P93839) G/HBF-1, partial (61%)
          Length = 1764

 Score = 50.8 bits (120), Expect = 5e-07
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 155 NLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLK 204
           N+     +R RRM+ NRESA RSR RKQA+  ELE+   +L  EN  LLK
Sbjct: 714 NMTPVDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRSENSSLLK 863


>TC233650 similar to UP|Q84JC9 (Q84JC9) BZIP transcription factor, partial
           (17%)
          Length = 792

 Score = 50.1 bits (118), Expect = 9e-07
 Identities = 26/47 (55%), Positives = 32/47 (67%)
 Frame = +3

Query: 162 QRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAE 208
           QR  R+IKNRESA RSR RKQAY+  LE    +L EEN +L ++  E
Sbjct: 336 QRHARIIKNRESAVRSRARKQAYRKGLEVEIARLTEENSRLKRQLKE 476


>BI970547 weakly similar to GP|29027731|dbj bZIP transcription factor
           {Arabidopsis thaliana}, partial (15%)
          Length = 697

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 32/47 (67%)
 Frame = -1

Query: 162 QRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAE 208
           QR  R+IKNRESA RSR RKQAY+  LE    +L EEN +L ++  E
Sbjct: 490 QRHTRVIKNRESAVRSRARKQAYRKGLEVEISRLTEENSRLKRQLKE 350


>TC218403 UP|Q39895 (Q39895) TGACG-motif binding factor, complete
          Length = 1195

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 55/93 (58%), Gaps = 3/93 (3%)
 Frame = +1

Query: 133 GFGNGVEVVEGT---RGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELE 189
           G   G E  +GT   + KRGR   +   K    R +R+++NR SA ++RERK+AY ++LE
Sbjct: 709 GSNAGTERAQGTGDSQKKRGRSPADKESK----RLKRLLRNRVSAQQARERKKAYLIDLE 876

Query: 190 SLAVKLEEENDKLLKEKAERTKERFKQLMEEVI 222
           +    LE++N + LKE+   T +   Q++ +++
Sbjct: 877 TRVKDLEKKNSE-LKERLS-TLQNENQMLRQIL 969


>TC208132 homologue to UP|Q94KA7 (Q94KA7) BZIP transcription factor 3,
           partial (33%)
          Length = 706

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
 Frame = +1

Query: 127 GSASVGGFGNGVEVVEGTRGKRGRPVVENLDKAAQQ----------RQRRMIKNRESAAR 176
           GS+++ G G  V     T    G   V + D A  Q          RQRR   NRESA R
Sbjct: 58  GSSNIPGLGRKVP---STAVAGGMVTVGSRDSAQSQLWLQDERELKRQRRKQSNRESARR 228

Query: 177 SRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQLMEEVIPVVEK 227
           SR RKQA   EL   A  L+EEN   L+ +  R +  ++QL+ E   + E+
Sbjct: 229 SRLRKQAECDELAQRAEALKEENAS-LRSEVNRIRSDYEQLLSENAALKER 378


>TC232589 similar to UP|Q8LK78 (Q8LK78) ABA response element binding factor,
           partial (10%)
          Length = 464

 Score = 47.8 bits (112), Expect = 5e-06
 Identities = 25/41 (60%), Positives = 29/41 (69%)
 Frame = +2

Query: 162 QRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKL 202
           QR  R+IKNRESA RSR RKQAY+  LE    +L EEN +L
Sbjct: 341 QRHTRVIKNRESAVRSRARKQAYRKGLEVEISRLTEENSRL 463


>CD412386 
          Length = 576

 Score = 47.4 bits (111), Expect = 6e-06
 Identities = 20/35 (57%), Positives = 28/35 (79%)
 Frame = -2

Query: 208 ERTKERFKQLMEEVIPVVEKRRPPRPLRRINSMQW 242
           ER KER+KQLME+V+P+ +K++P   LRR  S+QW
Sbjct: 575 ERKKERYKQLMEKVLPIAQKQKPLCILRRARSLQW 471


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.312    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,409,111
Number of Sequences: 63676
Number of extensions: 102423
Number of successful extensions: 1186
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of query: 242
length of database: 12,639,632
effective HSP length: 95
effective length of query: 147
effective length of database: 6,590,412
effective search space: 968790564
effective search space used: 968790564
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)